View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16709_low_4 (Length: 452)

Name: NF16709_low_4
Description: NF16709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16709_low_4
NF16709_low_4
[»] chr5 (41 HSPs)
chr5 (128-301)||(12458191-12458364)
chr5 (320-438)||(32089903-32090021)
chr5 (323-438)||(40330493-40330608)
chr5 (325-438)||(32835876-32835989)
chr5 (325-438)||(42619289-42619402)
chr5 (325-438)||(33257738-33257851)
chr5 (323-438)||(35291046-35291161)
chr5 (321-438)||(18726561-18726678)
chr5 (336-430)||(38176643-38176737)
chr5 (336-430)||(38203867-38203961)
chr5 (367-438)||(43316822-43316893)
chr5 (324-418)||(38596867-38596961)
chr5 (325-440)||(24498043-24498158)
chr5 (325-418)||(35395333-35395426)
chr5 (325-440)||(1344790-1344905)
chr5 (325-416)||(18728635-18728726)
chr5 (359-436)||(24232186-24232263)
chr5 (361-416)||(24496779-24496834)
chr5 (325-416)||(43318093-43318184)
chr5 (350-416)||(38178126-38178192)
chr5 (350-416)||(38205350-38205416)
chr5 (361-414)||(17574354-17574407)
chr5 (321-414)||(32087510-32087603)
chr5 (361-440)||(8541245-8541324)
chr5 (361-440)||(12738710-12738789)
chr5 (361-440)||(12801533-12801612)
chr5 (361-440)||(40782185-40782264)
chr5 (361-414)||(2179823-2179876)
chr5 (361-414)||(24541247-24541300)
chr5 (361-414)||(30463936-30463989)
chr5 (361-414)||(36057648-36057701)
chr5 (364-416)||(35292415-35292467)
chr5 (361-440)||(29620174-29620253)
chr5 (325-416)||(33256400-33256491)
chr5 (348-414)||(18625043-18625109)
chr5 (364-414)||(28813765-28813815)
chr5 (364-414)||(34327674-34327724)
chr5 (361-414)||(7267879-7267932)
chr5 (361-414)||(7269446-7269499)
chr5 (361-414)||(29621816-29621869)
chr5 (361-414)||(42473642-42473695)
[»] chr7 (47 HSPs)
chr7 (324-438)||(8421415-8421529)
chr7 (325-438)||(35342425-35342538)
chr7 (327-435)||(46810707-46810815)
chr7 (323-438)||(4321036-4321151)
chr7 (324-438)||(46994659-46994773)
chr7 (325-438)||(30108565-30108678)
chr7 (326-435)||(36756864-36756973)
chr7 (326-435)||(36766388-36766497)
chr7 (325-438)||(45465162-45465275)
chr7 (330-435)||(36762661-36762766)
chr7 (323-437)||(23955264-23955378)
chr7 (325-438)||(33775408-33775521)
chr7 (326-438)||(3690151-3690263)
chr7 (325-437)||(40785527-40785639)
chr7 (325-414)||(8423316-8423405)
chr7 (325-414)||(35344325-35344414)
chr7 (362-438)||(33037730-33037807)
chr7 (323-416)||(47341719-47341812)
chr7 (330-430)||(47339781-47339881)
chr7 (320-416)||(38613514-38613610)
chr7 (324-416)||(46996735-46996827)
chr7 (325-438)||(2168812-2168925)
chr7 (325-438)||(38614770-38614883)
chr7 (324-414)||(33038832-33038922)
chr7 (319-417)||(45463664-45463762)
chr7 (348-416)||(2167502-2167570)
chr7 (325-416)||(46812615-46812706)
chr7 (361-440)||(13169657-13169736)
chr7 (361-440)||(20479693-20479772)
chr7 (325-416)||(27955370-27955461)
chr7 (361-440)||(35403593-35403672)
chr7 (325-416)||(38614944-38615035)
chr7 (367-440)||(11682823-11682896)
chr7 (361-414)||(27666100-27666153)
chr7 (368-416)||(23953848-23953896)
chr7 (388-440)||(34785088-34785140)
chr7 (325-440)||(34692724-34692839)
chr7 (361-440)||(35402005-35402084)
chr7 (361-440)||(39857681-39857760)
chr7 (364-414)||(24228444-24228494)
chr7 (361-414)||(56366-56419)
chr7 (361-414)||(29996549-29996602)
chr7 (361-414)||(30940460-30940513)
chr7 (361-414)||(38474178-38474231)
chr7 (361-414)||(39859264-39859317)
chr7 (333-417)||(4322604-4322688)
chr7 (325-377)||(34784067-34784119)
[»] chr4 (50 HSPs)
chr4 (322-438)||(44792931-44793047)
chr4 (325-434)||(47942728-47942837)
chr4 (325-438)||(35997745-35997858)
chr4 (325-438)||(10371057-10371170)
chr4 (323-438)||(44992806-44992921)
chr4 (316-438)||(39085130-39085252)
chr4 (325-438)||(10767928-10768041)
chr4 (324-430)||(42879274-42879380)
chr4 (320-438)||(2828389-2828507)
chr4 (325-438)||(39922985-39923098)
chr4 (325-438)||(43778389-43778502)
chr4 (348-443)||(51040758-51040853)
chr4 (325-414)||(2350542-2350631)
chr4 (329-438)||(44556624-44556733)
chr4 (325-414)||(44794795-44794884)
chr4 (325-414)||(47941811-47941900)
chr4 (324-416)||(10372739-10372831)
chr4 (324-416)||(44558526-44558618)
chr4 (371-438)||(39190797-39190864)
chr4 (360-437)||(34460260-34460337)
chr4 (324-416)||(10762580-10762672)
chr4 (366-436)||(27626708-27626778)
chr4 (325-438)||(4520429-4520542)
chr4 (359-440)||(230470-230551)
chr4 (320-414)||(35996058-35996152)
chr4 (325-438)||(5486030-5486143)
chr4 (326-440)||(6999276-6999390)
chr4 (324-417)||(39083638-39083731)
chr4 (361-440)||(833259-833338)
chr4 (386-433)||(2348817-2348863)
chr4 (361-440)||(5439621-5439700)
chr4 (325-440)||(25995088-25995203)
chr4 (361-440)||(43507203-43507282)
chr4 (361-440)||(43508627-43508706)
chr4 (330-416)||(32653631-32653717)
chr4 (361-414)||(4173740-4173793)
chr4 (361-414)||(35404480-35404533)
chr4 (361-414)||(39345600-39345653)
chr4 (324-417)||(39921493-39921586)
chr4 (361-414)||(41761781-41761834)
chr4 (361-414)||(43519460-43519513)
chr4 (325-417)||(42880787-42880879)
chr4 (361-440)||(5437847-5437926)
chr4 (361-440)||(35401785-35401864)
chr4 (326-417)||(39189383-39189474)
chr4 (362-416)||(51041963-51042017)
chr4 (364-397)||(4519415-4519448)
chr4 (379-416)||(27624860-27624897)
chr4 (361-414)||(49523160-49523213)
chr4 (325-417)||(43779899-43779991)
[»] chr2 (34 HSPs)
chr2 (319-438)||(41708408-41708527)
chr2 (323-438)||(15373866-15373981)
chr2 (324-438)||(41120-41234)
chr2 (325-438)||(11021533-11021646)
chr2 (324-435)||(28248156-28248267)
chr2 (325-443)||(33193-33311)
chr2 (325-414)||(41706539-41706628)
chr2 (325-443)||(42880784-42880902)
chr2 (325-437)||(37418748-37418860)
chr2 (324-414)||(15372498-15372588)
chr2 (333-414)||(39564-39645)
chr2 (324-437)||(42003469-42003582)
chr2 (325-416)||(29909693-29909784)
chr2 (348-416)||(37417296-37417364)
chr2 (325-438)||(17948905-17949018)
chr2 (325-440)||(361445-361560)
chr2 (362-416)||(15432365-15432419)
chr2 (361-414)||(14389139-14389192)
chr2 (324-416)||(42001609-42001701)
chr2 (325-416)||(39430-39521)
chr2 (361-440)||(24205634-24205713)
chr2 (362-416)||(25619697-25619751)
chr2 (361-414)||(16763112-16763165)
chr2 (361-414)||(16764611-16764664)
chr2 (361-414)||(24208097-24208150)
chr2 (365-414)||(40560263-40560312)
chr2 (325-416)||(92380-92470)
chr2 (361-440)||(14387385-14387464)
chr2 (361-440)||(37022159-37022238)
chr2 (361-414)||(6786036-6786089)
chr2 (361-414)||(19908301-19908354)
chr2 (361-414)||(39664803-39664856)
chr2 (365-433)||(7745255-7745323)
chr2 (333-417)||(11023045-11023128)
[»] chr1 (39 HSPs)
chr1 (325-438)||(27952478-27952591)
chr1 (317-438)||(31803678-31803799)
chr1 (324-438)||(11152544-11152658)
chr1 (325-438)||(5784845-5784958)
chr1 (325-438)||(45379085-45379198)
chr1 (324-438)||(47264123-47264237)
chr1 (324-430)||(18180499-18180605)
chr1 (325-435)||(35478087-35478197)
chr1 (325-438)||(33679259-33679372)
chr1 (325-438)||(42136222-42136335)
chr1 (325-437)||(44159273-44159385)
chr1 (326-438)||(46636766-46636878)
chr1 (325-414)||(27940608-27940697)
chr1 (320-416)||(46638840-46638936)
chr1 (325-416)||(35480008-35480099)
chr1 (326-435)||(6577086-6577195)
chr1 (323-416)||(47269489-47269582)
chr1 (325-416)||(33685281-33685372)
chr1 (324-416)||(36895543-36895635)
chr1 (350-418)||(44157458-44157526)
chr1 (325-416)||(42134482-42134573)
chr1 (348-416)||(18183976-18184044)
chr1 (361-440)||(26223623-26223702)
chr1 (361-440)||(46582046-46582125)
chr1 (361-414)||(4856001-4856054)
chr1 (361-414)||(31238530-31238583)
chr1 (361-414)||(34778173-34778226)
chr1 (329-393)||(36894826-36894890)
chr1 (361-440)||(9120075-9120154)
chr1 (361-440)||(33599254-33599333)
chr1 (360-414)||(15104476-15104530)
chr1 (362-416)||(31801670-31801724)
chr1 (361-414)||(9121703-9121756)
chr1 (365-414)||(25278988-25279037)
chr1 (361-414)||(27087319-27087372)
chr1 (361-414)||(34776605-34776658)
chr1 (367-416)||(45381017-45381066)
chr1 (381-438)||(51123533-51123590)
chr1 (366-438)||(34041806-34041878)
[»] chr8 (62 HSPs)
chr8 (324-438)||(31199484-31199598)
chr8 (323-435)||(32824252-32824364)
chr8 (323-438)||(31823454-31823569)
chr8 (325-438)||(33748332-33748445)
chr8 (324-438)||(40019155-40019269)
chr8 (323-438)||(24526894-24527009)
chr8 (330-443)||(461181-461294)
chr8 (329-438)||(42894780-42894889)
chr8 (325-414)||(31201178-31201267)
chr8 (325-430)||(9876548-9876653)
chr8 (325-438)||(33368759-33368872)
chr8 (371-437)||(1322293-1322359)
chr8 (357-434)||(8655969-8656044)
chr8 (320-438)||(25373600-25373718)
chr8 (325-438)||(37524858-37524971)
chr8 (320-416)||(25707301-25707397)
chr8 (324-416)||(38882830-38882922)
chr8 (324-440)||(9186621-9186737)
chr8 (324-440)||(23811541-23811657)
chr8 (379-438)||(33158710-33158769)
chr8 (361-416)||(33750417-33750472)
chr8 (323-416)||(42897807-42897900)
chr8 (325-438)||(44620647-44620760)
chr8 (324-416)||(9184382-9184474)
chr8 (333-417)||(28433748-28433832)
chr8 (324-416)||(32822360-32822452)
chr8 (325-416)||(1320617-1320708)
chr8 (361-440)||(42943400-42943479)
chr8 (319-416)||(462403-462500)
chr8 (361-414)||(8609842-8609895)
chr8 (361-414)||(13282514-13282567)
chr8 (361-414)||(38548831-38548884)
chr8 (326-399)||(38881429-38881502)
chr8 (378-438)||(25370579-25370639)
chr8 (361-441)||(27404246-27404326)
chr8 (348-416)||(33160181-33160249)
chr8 (361-440)||(601678-601757)
chr8 (361-440)||(13106840-13106919)
chr8 (361-440)||(15308235-15308314)
chr8 (361-440)||(15488604-15488683)
chr8 (324-414)||(31821417-31821507)
chr8 (324-414)||(37526058-37526148)
chr8 (325-414)||(8654500-8654588)
chr8 (359-440)||(11031463-11031544)
chr8 (361-414)||(27691190-27691243)
chr8 (361-440)||(29237187-29237266)
chr8 (361-440)||(29239161-29239240)
chr8 (365-440)||(33761109-33761184)
chr8 (368-414)||(9673220-9673266)
chr8 (325-414)||(5075368-5075457)
chr8 (361-414)||(13108391-13108444)
chr8 (324-437)||(25356348-25356461)
chr8 (365-414)||(26242369-26242418)
chr8 (361-414)||(27692837-27692890)
chr8 (361-430)||(33707242-33707311)
chr8 (361-414)||(33762713-33762766)
chr8 (361-402)||(34681078-34681119)
chr8 (361-414)||(35509250-35509303)
chr8 (361-414)||(38547264-38547317)
chr8 (361-440)||(8608273-8608353)
chr8 (348-408)||(10267861-10267921)
chr8 (330-382)||(28432241-28432293)
[»] chr3 (59 HSPs)
chr3 (323-438)||(33111839-33111954)
chr3 (325-438)||(40508493-40508606)
chr3 (322-438)||(1847623-1847739)
chr3 (325-437)||(48635352-48635464)
chr3 (325-436)||(45897050-45897161)
chr3 (325-437)||(33850982-33851094)
chr3 (325-438)||(40998515-40998628)
chr3 (325-438)||(23887198-23887311)
chr3 (329-437)||(18428753-18428860)
chr3 (322-416)||(23774149-23774243)
chr3 (371-437)||(37865430-37865496)
chr3 (328-438)||(45255486-45255596)
chr3 (325-438)||(2975460-2975573)
chr3 (323-416)||(40508944-40509037)
chr3 (320-416)||(41021036-41021132)
chr3 (320-416)||(48633872-48633968)
chr3 (321-416)||(33113213-33113308)
chr3 (323-416)||(2977362-2977455)
chr3 (348-405)||(24381767-24381824)
chr3 (325-437)||(33051444-33051556)
chr3 (325-416)||(23888805-23888896)
chr3 (325-416)||(31887485-31887576)
chr3 (325-440)||(40963374-40963489)
chr3 (325-416)||(45257253-45257344)
chr3 (325-416)||(51454283-51454374)
chr3 (357-438)||(31885550-31885631)
chr3 (326-438)||(49494477-49494589)
chr3 (364-440)||(53092662-53092738)
chr3 (325-412)||(18430308-18430395)
chr3 (392-438)||(23775631-23775677)
chr3 (361-414)||(2226207-2226260)
chr3 (323-440)||(41946075-41946192)
chr3 (361-414)||(53190814-53190867)
chr3 (361-440)||(23291606-23291685)
chr3 (361-440)||(46308843-46308922)
chr3 (361-440)||(53094247-53094326)
chr3 (322-416)||(45898381-45898475)
chr3 (361-414)||(21348759-21348812)
chr3 (361-414)||(27899136-27899189)
chr3 (363-440)||(30501155-30501232)
chr3 (361-414)||(30599973-30600026)
chr3 (361-414)||(35905767-35905820)
chr3 (361-414)||(38193510-38193563)
chr3 (333-414)||(41944584-41944665)
chr3 (361-414)||(41979352-41979405)
chr3 (371-440)||(46611277-46611346)
chr3 (361-414)||(54898473-54898526)
chr3 (324-416)||(24382926-24383018)
chr3 (364-440)||(38191934-38192010)
chr3 (361-440)||(3150288-3150367)
chr3 (361-440)||(28626447-28626526)
chr3 (375-414)||(33852705-33852744)
chr3 (361-440)||(46609185-46609264)
chr3 (361-440)||(53187778-53187857)
chr3 (361-440)||(54900048-54900127)
chr3 (361-414)||(3152273-3152326)
chr3 (361-414)||(41977786-41977839)
chr3 (361-414)||(44794243-44794296)
chr3 (361-414)||(46310436-46310489)
[»] chr6 (22 HSPs)
chr6 (325-438)||(4646194-4646307)
chr6 (323-438)||(29114754-29114869)
chr6 (325-435)||(30639611-30639721)
chr6 (325-414)||(4641355-4641444)
chr6 (325-430)||(17950561-17950666)
chr6 (323-438)||(35174389-35174504)
chr6 (325-414)||(2968139-2968228)
chr6 (325-416)||(29112300-29112391)
chr6 (325-416)||(29077328-29077419)
chr6 (326-440)||(31210416-31210530)
chr6 (336-416)||(3018465-3018545)
chr6 (330-384)||(4289423-4289477)
chr6 (361-414)||(13613617-13613670)
chr6 (324-417)||(17952074-17952167)
chr6 (361-414)||(32439126-32439179)
chr6 (324-416)||(34345324-34345416)
chr6 (361-440)||(3480631-3480710)
chr6 (361-440)||(32454284-32454363)
chr6 (361-440)||(32518471-32518550)
chr6 (361-414)||(3456784-3456837)
chr6 (361-414)||(20523402-20523455)
chr6 (325-417)||(35175895-35175987)
[»] scaffold0477 (1 HSPs)
scaffold0477 (325-414)||(6669-6758)
[»] scaffold1041 (2 HSPs)
scaffold1041 (348-437)||(2121-2210)
scaffold1041 (381-438)||(2869-2926)
[»] scaffold1712 (1 HSPs)
scaffold1712 (361-440)||(1018-1097)
[»] scaffold0081 (1 HSPs)
scaffold0081 (361-440)||(54232-54311)
[»] scaffold0058 (3 HSPs)
scaffold0058 (361-440)||(14317-14396)
scaffold0058 (361-414)||(3330-3383)
scaffold0058 (361-414)||(4502-4555)


Alignment Details
Target: chr5 (Bit Score: 166; Significance: 1e-88; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 128 - 301
Target Start/End: Original strand, 12458191 - 12458364
Alignment:
Q  128 aacatgctaacaacaatgagggatctagactttaaaattcacctagaaggaataacgtaagagaatatcattcgcccataacgccttcaccaaggcgttg 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  12458191 aacatgctaacaacaatgagggatctagactttaaaattcacctagaaggaataacgtgagagactatcattcgcccataacgccttcaccaaggcgttg 12458290  T
Q  228 tcaaacactaagacttgatttccctttttgatcgttaggaagagagttgaaggctcacttagctagcttatagt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12458291 tcaaacactaagacttgatttccctttttgatcgttaggaagagagttgaaggctcacttagctagcttatagt 12458364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 320 - 438
Target Start/End: Complemental strand, 32090021 - 32089903
Alignment:
Q  320 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaa 419  Q
    |||||||||||||||||||||| || |||||||| | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32090021 aaattgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaa 32089922  T
Q  420 ttgtcaatcaatttagtcc 438  Q
     |||||||||| |||||||    
T  32089921 atgtcaatcaagttagtcc 32089903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 40330608 - 40330493
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    ||||||||||||||||||| || |||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40330608 ttgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatg 40330509  T
Q  423 tcaatcaatttagtcc 438  Q
    | |||||| |||||||    
T  40330508 tgaatcaagttagtcc 40330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 32835876 - 32835989
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  32835876 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttattaaatgtc 32835975  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  32835976 aatcaagttagtcc 32835989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 42619289 - 42619402
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  42619289 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaatgtc 42619388  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  42619389 aatcaagttagtcc 42619402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 33257851 - 33257738
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||| ||||||||||| || |||||||| | |||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  33257851 gagtggatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 33257752  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  33257751 aatcaagttagtcc 33257738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 35291046 - 35291161
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    ||||||||||||||||  | || |||||||| |||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||    
T  35291046 ttgagtgaatcatcaatgtcgtccctgaattttcacggttcggccaaattcatccctcaactatgtgaaatatcaatttaatccctgaatttgttaaatg 35291145  T
Q  423 tcaatcaatttagtcc 438  Q
    |||||||| |||||||    
T  35291146 tcaatcaagttagtcc 35291161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 321 - 438
Target Start/End: Original strand, 18726561 - 18726678
Alignment:
Q  321 aattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaat 420  Q
    ||||||||||||||||||||| || |||||||| | |||| |   |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||     
T  18726561 aattgagtgaatcatcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtcccttaatttgttaaa 18726660  T
Q  421 tgtcaatcaatttagtcc 438  Q
    |||||||||| |||||||    
T  18726661 tgtcaatcaagttagtcc 18726678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 38176643 - 38176737
Alignment:
Q  336 caacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaa 430  Q
    |||||| || |||||||| ||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  38176643 caacttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatatcaatcaa 38176737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 38203867 - 38203961
Alignment:
Q  336 caacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaa 430  Q
    |||||| || |||||||| ||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  38203867 caacttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatatcaatcaa 38203961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 43316822 - 43316893
Alignment:
Q  367 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 438  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  43316822 caaattcatccttcaactatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 43316893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 418
Target Start/End: Original strand, 38596867 - 38596961
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 418  Q
    |||||||| |||||| || || | |||||| | | || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  38596867 tgagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtta 38596961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 24498158 - 24498043
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||| ||||| || | ||||||  || ||||||| |||| || |||||||||||||||| | ||||| ||| ||||||||||||| |  ||||    
T  24498158 gagtgaatcattaacttcgtccgtgaatttgcaaggatcggtcaaaatcatccctcaattatgcgataaatcaaattagtccctgaatttgtcatatgtc 24498059  T
Q  425 aatcaatttagtccct 440  Q
    ||||||||||||||||    
T  24498058 aatcaatttagtccct 24498043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 35395333 - 35395426
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 418  Q
    ||||||| |||||| ||  | |||||||| ||||   |||||||| |||||||||||||||||||||||||||||||| | |||||||||||||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgtta 35395426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 1344905 - 1344790
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||||||| || || ||||||||  || | ||||| |||||| ||||| ||||| | |||||||||||  || ||| ||||||||| || ||||    
T  1344905 gagtgaatcatcaatttcgtccctgaatttgcatgaatcggtcaaatttgtcccccaattttacgaaatatcaaaatagtccttgaatttgtaaaatgtc 1344806  T
Q  425 aatcaatttagtccct 440  Q
    ||||||||||||||||    
T  1344805 aatcaatttagtccct 1344790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 18728726 - 18728635
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || |||||||| ||||   |||||||| ||||||||| |||||||||||||||||| ||| |||||||||||||    
T  18728726 gagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgt 18728635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 436
Target Start/End: Original strand, 24232186 - 24232263
Alignment:
Q  359 ggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagt 436  Q
    |||||||| |||||| | ||||||||||| ||||||||||| ||||  ||||||||||||| |||||||||| |||||    
T  24232186 ggatcggcaaaattcattcctcaattatgtgaaatatcaatctaatttctgaatttgttaaatgtcaatcaagttagt 24232263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 416
Target Start/End: Original strand, 24496779 - 24496834
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||| |||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  24496779 atcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgt 24496834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 43318184 - 43318093
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || | |||||| | | || ||||||||| || |||||||||||||||||||||||| ||| |||||||||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 43318093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 38178192 - 38178126
Alignment:
Q  350 aattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||| |||||| |||| ||||||| |||||||||||||||||||||||||||| |  ||||||||||    
T  38178192 aattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgt 38178126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 38205416 - 38205350
Alignment:
Q  350 aattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||| |||||| |||| ||||||| |||||||||||||||||||||||||||| |  ||||||||||    
T  38205416 aattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgt 38205350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 17574354 - 17574407
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  17574354 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 17574407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 414
Target Start/End: Original strand, 32087510 - 32087603
Alignment:
Q  321 aattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||| |||||| || || |||||||| |||||  |||  ||| ||||||||| |||||||||||||||||| ||| ||||| |||||    
T  32087510 aattgagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaattt 32087603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 8541324 - 8541245
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| ||| |||||||   || |||||||||| | |||||||    
T  8541324 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaatgtcaatcaaatcagtccct 8541245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 12738789 - 12738710
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||||||||| ||| |||| ||||||||||| ||||| |||||||||||   || |||||||||| | |||||||    
T  12738789 atcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccct 12738710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 12801612 - 12801533
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||||||||| ||| |||| ||||||||||| ||||| |||||||||||   || |||||||||| | |||||||    
T  12801612 atcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccct 12801533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 40782264 - 40782185
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||||    
T  40782264 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccct 40782185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 2179823 - 2179876
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||||||||||||| |||| || |||||||| |||||||||||||||||    
T  2179823 atcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattt 2179876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 24541300 - 24541247
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  24541300 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 24541247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 30463936 - 30463989
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  30463936 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 36057701 - 36057648
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||| |||| ||||||||||| |||||  ||||||||||    
T  36057701 atcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattt 36057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 35292467 - 35292415
Alignment:
Q  364 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| || ||| |||||||||||||||||||| ||| |||||||||||||    
T  35292467 ggccaaaatcatccttcaattatgcgaaatatcaacttagtccctgaatttgt 35292415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 29620174 - 29620253
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| || ||||||||   || |||||||||| |||||||||    
T  29620174 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtcaatcaaattagtccct 29620253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 416
Target Start/End: Original strand, 33256400 - 33256491
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || |||||||| | ||   |||||||| ||| ||| |||||||||||||||||||| ||||||  |||||||||    
T  33256400 gagtgaaccatcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgt 33256491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 18625109 - 18625043
Alignment:
Q  348 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||| |||| |||| || |||||||||||| |||| || |||||||| ||||| |||||||||||    
T  18625109 tgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 18625043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 414
Target Start/End: Complemental strand, 28813815 - 28813765
Alignment:
Q  364 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  28813815 ggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 414
Target Start/End: Original strand, 34327674 - 34327724
Alignment:
Q  364 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||| || |||| ||||||||||| ||||| |||||||||||    
T  34327674 ggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattt 34327724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 7267879 - 7267932
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||| ||||||||||| || |||| ||||||||||| ||||| |||||||||||    
T  7267879 atcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattt 7267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 7269499 - 7269446
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||| || ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  7269499 atcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 29621869 - 29621816
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  29621869 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29621816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 42473695 - 42473642
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||||| |||||||||||  || |||||||||||    
T  42473695 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 42473642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 324 - 438
Target Start/End: Original strand, 8421415 - 8421529
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8421415 tgagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 8421514  T
Q  424 caatcaatttagtcc 438  Q
    |||||||||||||||    
T  8421515 caatcaatttagtcc 8421529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 35342425 - 35342538
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35342425 gagtgaatcatcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 35342524  T
Q  425 aatcaatttagtcc 438  Q
    ||||||||||||||    
T  35342525 aatcaatttagtcc 35342538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 327 - 435
Target Start/End: Original strand, 46810707 - 46810815
Alignment:
Q  327 gtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaa 426  Q
    ||||||||||||||| || |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46810707 gtgaatcatcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaa 46810806  T
Q  427 tcaatttag 435  Q
    |||| ||||    
T  46810807 tcaagttag 46810815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 4321036 - 4321151
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    ||||||||||||||||||| || |||||||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  4321036 ttgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatg 4321135  T
Q  423 tcaatcaatttagtcc 438  Q
    |||||||| |||||||    
T  4321136 tcaatcaagttagtcc 4321151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 324 - 438
Target Start/End: Original strand, 46994659 - 46994773
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    |||||||||||||||||| || |||||||| |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  46994659 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 46994758  T
Q  424 caatcaatttagtcc 438  Q
    ||||||| |||||||    
T  46994759 caatcaagttagtcc 46994773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 30108565 - 30108678
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30108565 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 30108664  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  30108665 aatcaagttagtcc 30108678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 326 - 435
Target Start/End: Complemental strand, 36756973 - 36756864
Alignment:
Q  326 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 425  Q
    |||||||||||||||| ||||||||||| ||| ||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  36756973 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgttaaatgtca 36756874  T
Q  426 atcaatttag 435  Q
    ||||| ||||    
T  36756873 atcaagttag 36756864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 326 - 435
Target Start/End: Complemental strand, 36766497 - 36766388
Alignment:
Q  326 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 425  Q
    |||||||||||||||| ||||||||||| ||| ||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  36766497 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgttaaatgtca 36766398  T
Q  426 atcaatttag 435  Q
    ||||| ||||    
T  36766397 atcaagttag 36766388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 45465275 - 45465162
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || | |||||| | |||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45465275 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 45465176  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  45465175 aatcaagttagtcc 45465162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 330 - 435
Target Start/End: Complemental strand, 36762766 - 36762661
Alignment:
Q  330 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatca 429  Q
    |||||||||||| || |||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  36762766 aatcatcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaatttgttaaatgtcaatca 36762667  T
Q  430 atttag 435  Q
    | ||||    
T  36762666 agttag 36762661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 323 - 437
Target Start/End: Complemental strand, 23955378 - 23955264
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    ||||||||||||||||||| ||  ||||||| | | |||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| ||    
T  23955378 ttgagtgaatcatcaacttcgtctctgaatttttatggattggccaaattcgtcccttaattatgtgaaatatcaatttaatctctgaatttgttaaatg 23955279  T
Q  423 tcaatcaatttagtc 437  Q
    |||||||| ||||||    
T  23955278 tcaatcaagttagtc 23955264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 33775408 - 33775521
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||| ||||||| || |||||||| | |||| |||| ||| ||||||| |||||||||||||||||||||||||||||||||||| |||| ||||    
T  33775408 gagtgaatcgtcaacttcgtccctgaatttttacgggtcggtcaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttattaaatgtc 33775507  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  33775508 aatcaagttagtcc 33775521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 326 - 438
Target Start/End: Original strand, 3690151 - 3690263
Alignment:
Q  326 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 425  Q
    |||||||||||||||| || | |||||| | || | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  3690151 agtgaatcatcaacttcgtccttgaatttttacagttcggccaacttcgttcctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtca 3690250  T
Q  426 atcaatttagtcc 438  Q
    ||||| |||||||    
T  3690251 atcaagttagtcc 3690263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 437
Target Start/End: Complemental strand, 40785639 - 40785527
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||||||| || || | |||||| |||||| |||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  40785639 gagtgaatcatcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattatgtgaaatatcaatctaatccctgaatttgttaaatgtc 40785540  T
Q  425 aatcaatttagtc 437  Q
    |||||| ||||||    
T  40785539 aatcaagttagtc 40785527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 8423405 - 8423316
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| ||||| |||||||| |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8423405 gagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaattt 8423316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 35344414 - 35344325
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| ||||| || ||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35344414 gagtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 35344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 362 - 438
Target Start/End: Original strand, 33037730 - 33037807
Alignment:
Q  362 tcggccaaattcgtccctcaattatgcgaaatatcaa-tttaatccctgaatttgttaattgtcaatcaatttagtcc 438  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  33037730 tcggccaaattcatccctcaattatgtgaaatatcaattttaatccctgaatttgttaaatgtcaatcaagttagtcc 33037807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 47341812 - 47341719
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||||| |||||| || || | |||||| |||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  47341812 ttgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 47341719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 330 - 430
Target Start/End: Original strand, 47339781 - 47339881
Alignment:
Q  330 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatca 429  Q
    |||||||||||| || ||||||||   |||| |||||||| |||||| |||||| |||||||||||||||||||||  |||||||||||| |||||||||    
T  47339781 aatcatcaacttcgtccctgaatttctacgggtcggccaacttcgtctctcaatgatgcgaaatatcaatttaatctttgaatttgttaaatgtcaatca 47339880  T
Q  430 a 430  Q
    |    
T  47339881 a 47339881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 416
Target Start/End: Complemental strand, 38613610 - 38613514
Alignment:
Q  320 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||| ||||||| |||||| || || | | |||| |||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  38613610 aaatcgagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 38613514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 416
Target Start/End: Complemental strand, 46996827 - 46996735
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||| |||||| || || |||||||| |||||  |||||||| |||||||||||||||||||||||||||| ||| || ||||||||||    
T  46996827 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgt 46996735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 2168925 - 2168812
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || | |||||| | || | ||| |||||||| ||||| ||||| |  ||||||||||||| ||| |||||||||||| ||||    
T  2168925 gagtgaatcatcaacttcgtccttgaatttttactggtcgtccaaattcatcccttaattaagaaaaatatcaatttagtccttgaatttgttaaatgtc 2168826  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  2168825 aatcaagttagtcc 2168812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 38614883 - 38614770
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||  || | |||||| | | || |||| ||||||| |||||||||||||| ||||||||| ||| ||| ||| |||||||| ||||    
T  38614883 gagtgaatcatcaactacgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccttgagtttgttaaatgtc 38614784  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  38614783 aatcaagttagtcc 38614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 414
Target Start/End: Complemental strand, 33038922 - 33038832
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||| || || | |||||| | | || |||| ||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  33038922 tgagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaattt 33038832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 417
Target Start/End: Original strand, 45463664 - 45463762
Alignment:
Q  319 taaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    ||||||||||||| |||||| || || |||||||| ||| || |||||||||||||||||| ||||   |||||||||||  || ||||||||||||||    
T  45463664 taaattgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtt 45463762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 416
Target Start/End: Original strand, 2167502 - 2167570
Alignment:
Q  348 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||  |||| |||| ||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  2167502 tgaattagtacgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 2167570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 46812706 - 46812615
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| ||||||||| || | |||||| | |||  |||||||||||| ||||||||||| | |||||||||||||| ||||| |||||||    
T  46812706 gagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgt 46812615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 13169736 - 13169657
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||||||||||| |||||| |||| ||||||||||| ||||| |||||||||||   || |||||||||| | |||||||    
T  13169736 atcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccct 13169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 20479772 - 20479693
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||||    
T  20479772 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccct 20479693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 416
Target Start/End: Original strand, 27955370 - 27955461
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||||||||| || || | |||||| | ||||||| || |||||| |||||||||| | ||||||||||| |||||  ||||||||||    
T  27955370 gagtgaatcatcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgt 27955461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 35403672 - 35403593
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  35403672 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 35403593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 38615035 - 38614944
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || | | |||| |||||| |||  ||||||| ||||||||||||||||||||| || ||| |||||||||||||    
T  38615035 gagtgaaacatcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattatgcgaaatattaacttagtccctgaatttgt 38614944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 440
Target Start/End: Original strand, 11682823 - 11682896
Alignment:
Q  367 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||| ||||||||||||||||| ||||||||| ||| ||| |||||| ||||   ||| |||||||||||||||    
T  11682823 caaaatcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccct 11682896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 27666153 - 27666100
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  27666153 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 27666100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 23953848 - 23953896
Alignment:
Q  368 aaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||||| |||||||||||||||||||| ||| ||| |||||||||    
T  23953848 aaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgt 23953896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 34785140 - 34785088
Alignment:
Q  388 cgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||||||||||  || ||||||||||||| || ||||||||||||||||||||    
T  34785140 cgaaatatcaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccct 34785088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 34692839 - 34692724
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||||||||||  |  |||||||  ||| |||||| |||||| || ||||||||   |||||||| ||  || ||||||||||||| || ||||    
T  34692839 gagtgaatcatcaacttgatctctgaatttgcactgatcggtcaaatttgtacctcaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgtc 34692740  T
Q  425 aatcaatttagtccct 440  Q
     |||||||| ||||||    
T  34692739 catcaattttgtccct 34692724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 35402005 - 35402084
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||||| || ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  35402005 atcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 35402084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 39857681 - 39857760
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||| ||||||   || |||||||||| | |||||||    
T  39857681 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaatcaaatcagtccct 39857760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 414
Target Start/End: Complemental strand, 24228494 - 24228444
Alignment:
Q  364 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||||||||||||| |||| ||||||||||| ||||| || ||||||||    
T  24228494 ggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 24228444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 56366 - 56419
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||| || ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  56366 atcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 56419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 29996602 - 29996549
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  29996602 atcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattt 29996549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 30940513 - 30940460
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||||||||||||| || |||| | ||||||||| ||||| |||||||||||    
T  30940513 atcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattt 30940460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 38474231 - 38474178
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| ||| |||||||    
T  38474231 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 38474178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 39859317 - 39859264
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||||||||| |||||| |||| ||||||||||| ||||| ||| |||||||    
T  39859317 atcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattt 39859264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 417
Target Start/End: Complemental strand, 4322688 - 4322604
Alignment:
Q  333 catcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    |||||| || || |||||||  ||| |||||||||||| ||||||| |||||   |||||||||||  || ||||||||||||||    
T  4322688 catcaatttcgtccctgaatattcagggatcggccaaactcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtt 4322604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 34784067 - 34784119
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtcc 377  Q
    ||||||||||||||||| || | ||||||  |||| |||||||||||||||||    
T  34784067 gagtgaatcatcaacttcgtccttgaatttgcacgaatcggccaaattcgtcc 34784119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 3e-52; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 322 - 438
Target Start/End: Original strand, 44792931 - 44793047
Alignment:
Q  322 attgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaatt 421  Q
    ||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44792931 attgagttaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaatt 44793030  T
Q  422 gtcaatcaatttagtcc 438  Q
    |||||||||||||||||    
T  44793031 gtcaatcaatttagtcc 44793047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 47942837 - 47942728
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47942837 gagtgaatcatcaacttagttcatgaattatcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaattgtc 47942738  T
Q  425 aatcaattta 434  Q
    ||||||||||    
T  47942737 aatcaattta 47942728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 35997858 - 35997745
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35997858 gagtgaatcatcaactttgtccctgaattttcacgggtcggccaaattcgttcctcaattataagaaatatcaatttaatccctgaatttgttaattgtc 35997759  T
Q  425 aatcaatttagtcc 438  Q
    ||||||||||||||    
T  35997758 aatcaatttagtcc 35997745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 10371057 - 10371170
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||| |||||||||||| |||||||| |||||  ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10371057 gagtgaaccatcaacttagtccctgaattttcacgcgtcggctaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgttaattgtc 10371156  T
Q  425 aatcaatttagtcc 438  Q
    ||||||||||||||    
T  10371157 aatcaatttagtcc 10371170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 44992806 - 44992921
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    ||||||||||||||||||| || |||||||| | |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  44992806 ttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgttaaatg 44992905  T
Q  423 tcaatcaatttagtcc 438  Q
    |||||||| |||||||    
T  44992906 tcaatcaagttagtcc 44992921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 316 - 438
Target Start/End: Complemental strand, 39085252 - 39085130
Alignment:
Q  316 ttataaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttg 415  Q
    ||||||| |||||||||||||||||| || |||||||| | |||| |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  39085252 ttataaaatgagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttg 39085153  T
Q  416 ttaattgtcaatcaatttagtcc 438  Q
    |||| |||||||||| |||||||    
T  39085152 ttaaatgtcaatcaagttagtcc 39085130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 10768041 - 10767928
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||| |||||| |||||||||||||| |||||  ||||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  10768041 gagtgaaccatcaagttagttcctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgttaattgtc 10767942  T
Q  425 aatcaatttagtcc 438  Q
    ||||||||||||||    
T  10767941 aatcaatttagtcc 10767928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 430
Target Start/End: Original strand, 42879274 - 42879380
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    |||||||||||||||||| || |||||||| | |||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  42879274 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgttaaatgt 42879373  T
Q  424 caatcaa 430  Q
    |||||||    
T  42879374 caatcaa 42879380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 320 - 438
Target Start/End: Complemental strand, 2828507 - 2828389
Alignment:
Q  320 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaa 419  Q
    |||| ||||||||||||||||| || |||||||| | | || |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  2828507 aaatagagtgaatcatcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaa 2828408  T
Q  420 ttgtcaatcaatttagtcc 438  Q
     |||||||||| |||||||    
T  2828407 atgtcaatcaagttagtcc 2828389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 39923098 - 39922985
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||| |||||| || || |||||||| | || | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39923098 gagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 39922999  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  39922998 aatcaagttagtcc 39922985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 43778389 - 43778502
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || | |||||| | |||| |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  43778389 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgttaaatgtc 43778488  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  43778489 aatcaagttagtcc 43778502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 348 - 443
Target Start/End: Original strand, 51040758 - 51040853
Alignment:
Q  348 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccctttg 443  Q
    |||||| |||||| |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| ||||    
T  51040758 tgaattttcacgggtcggccaaattcatccttcaattatgcgaaatatcaattcaatccctgaatttgttaaatgtcaatcaagtcagtccttttg 51040853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 2350631 - 2350542
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| ||||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaattt 2350542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 329 - 438
Target Start/End: Original strand, 44556624 - 44556733
Alignment:
Q  329 gaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatc 428  Q
    |||| |||||||| || |||||||| | |||| |||| |||||| |||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||    
T  44556624 gaattatcaactttgtccctgaatttttacgggtcggtcaaattagtccctcaattatgtgaaatatcaatttagtccatgaatttgttaaatgtcaatc 44556723  T
Q  429 aatttagtcc 438  Q
    || |||||||    
T  44556724 aagttagtcc 44556733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 44794884 - 44794795
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| ||||| |||||||| ||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44794884 gagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 44794795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 47941811 - 47941900
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| ||||| |||||||| | |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaattt 47941900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 324 - 416
Target Start/End: Complemental strand, 10372831 - 10372739
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||| |||||| || || |||||||| |||||  ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  10372831 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgt 10372739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 324 - 416
Target Start/End: Complemental strand, 44558618 - 44558526
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||| ||||||||| || | |||||| |||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  44558618 tgagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 44558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 371 - 438
Target Start/End: Complemental strand, 39190864 - 39190797
Alignment:
Q  371 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 438  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  39190864 ttcgtccctcaattatgcgaaatatcaatttaatccgtgaatttgttaaatgtcaatcaagttagtcc 39190797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 34460260 - 34460337
Alignment:
Q  360 gatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtc 437  Q
    |||||| |||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  34460260 gatcggtcaaattcgtctcttaattatgcaaaatatcaatttaatccctaaatttgttaattgtcgatcaatttagtc 34460337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 416
Target Start/End: Original strand, 10762580 - 10762672
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||| |||||| || || |||||||| |||||  ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  10762580 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 10762672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 27626778 - 27626708
Alignment:
Q  366 ccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagt 436  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  27626778 ccaaattagtccatgaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagt 27626708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 4520542 - 4520429
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || | |||||| | | |  |||||||||||| ||| |||||||||||||||||||| ||| | | |||||||||||| ||||    
T  4520542 gagtgaatcatcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatcaacttagttcttgaatttgttaaatgtc 4520443  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  4520442 aatcaagttagtcc 4520429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 359 - 440
Target Start/End: Original strand, 230470 - 230551
Alignment:
Q  359 ggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| || |||||||||  |  |||| |||||||||||||||    
T  230470 ggatcggccaaaatcgtccctcaattatgcgaaatatcaaattagtctctgaatttggcatatgtcgatcaatttagtccct 230551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 414
Target Start/End: Original strand, 35996058 - 35996152
Alignment:
Q  320 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||| ||||||| |||||| |||||  ||| ||| | | || |||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  35996058 aaatagagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaattt 35996152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 5486143 - 5486030
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||| |||||| || || |||||||| | | || |||||||||||| ||||| ||||   |||||||||||  || |||||||||||||||| ||||    
T  5486143 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatccctaaatttaacgaaatatcaaaatagtccctgaatttgttaaatgtc 5486044  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  5486043 aatcaagttagtcc 5486030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 440
Target Start/End: Complemental strand, 6999390 - 6999276
Alignment:
Q  326 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 425  Q
    ||||||||||||| || || | ||||||  |||| ||||||||||||||||| ||||||    ||||||||||  || || |||||||||| || | |||    
T  6999390 agtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtccttcaatttaatgaaatatcaaaatagtctctgaatttgtaaaatatca 6999291  T
Q  426 atcaatttagtccct 440  Q
    |||||||||||||||    
T  6999290 atcaatttagtccct 6999276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 417
Target Start/End: Original strand, 39083638 - 39083731
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    |||||||| |||||| || || |||||||| ||| || |||||||||||||||||| ||||   |||||||||||  || ||||||||||||||    
T  39083638 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtt 39083731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 833259 - 833338
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||||| |||||||||||  || |||||||||||   || |||||||||| |||||||||    
T  833259 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccct 833338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 433
Target Start/End: Original strand, 2348817 - 2348863
Alignment:
Q  386 tgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaattt 433  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  2348817 tgcgaaatatcaagttaatcc-tgaatttgttaattgtcaatcaattt 2348863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 5439700 - 5439621
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||||| |||||||||||  || |||||||||||   || |||||||||| |||||||||    
T  5439700 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccct 5439621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 25995203 - 25995088
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || | | ||||  |||| ||||||||||||  |||| |||||   |||||||||||  || | ||||||||||| || ||||    
T  25995203 gagtgaatcatcaacttcgtccataaatttgcacgaatcggccaaatttatcccccaatttaacgaaatatcaaaatagttcctgaatttgtaaaatgtc 25995104  T
Q  425 aatcaatttagtccct 440  Q
    |||||||||| |||||    
T  25995103 aatcaatttattccct 25995088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 43507203 - 43507282
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  43507203 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 43507282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 43508706 - 43508627
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  43508706 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 43508627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 416
Target Start/End: Complemental strand, 32653717 - 32653631
Alignment:
Q  330 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||||||| |||||||||||  ||| |||||| ||||||||||| ||||||   |||||||||||  || | |||||||||||    
T  32653717 aatcatcaacttggttcctgaatttgcactgatcggtcaaattcgtccttcaatttaacgaaatatcaaaatagtgcctgaatttgt 32653631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 4173793 - 4173740
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  4173793 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 35404533 - 35404480
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||| |||||||||| |||||| ||||||||||  |||||||||||||||||    
T  35404533 atcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattt 35404480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 39345600 - 39345653
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||| |||| ||||||||| | ||||| |||||||||||    
T  39345600 atcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 417
Target Start/End: Original strand, 39921493 - 39921586
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    |||||||| |||||| || || |||||||| ||| || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  39921493 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 39921586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 41761834 - 41761781
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||  |||| ||||||||||| ||||| |||||||||||    
T  41761834 atcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattt 41761781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 43519460 - 43519513
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  43519460 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43519513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 417
Target Start/End: Complemental strand, 42880879 - 42880787
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    ||||||| |||||| || || |||||||| ||| || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  42880879 gagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 42880787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 5437847 - 5437926
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||||| || ||||||||| |||||| |||||||||||  || |||||||||||   || |||||||||| |||||||||    
T  5437847 atcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccct 5437926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 35401785 - 35401864
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||||||||||||| |||| || |||||||| ||||| ||| |||||||   || |||||||||| | |||||||    
T  35401785 atcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtcaatcaaatcagtccct 35401864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 417
Target Start/End: Original strand, 39189383 - 39189474
Alignment:
Q  326 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    |||||| |||||| || || |||||||| ||| || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  39189383 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 39189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 51042017 - 51041963
Alignment:
Q  362 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||| ||||||| ||||||||||||| |||||||||| ||| ||| |||||||||    
T  51042017 tcggtcaaattcatccctcaattatgtgaaatatcaacttagtccatgaatttgt 51041963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 397
Target Start/End: Original strand, 4519415 - 4519448
Alignment:
Q  364 ggccaaattcgtccctcaattatgcgaaatatca 397  Q
    |||||||||| |||||||||||||||||||||||    
T  4519415 ggccaaattcatccctcaattatgcgaaatatca 4519448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 416
Target Start/End: Original strand, 27624860 - 27624897
Alignment:
Q  379 tcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  27624860 tcaattatgcgaaatatcaacttagtccctgaatttgt 27624897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 49523160 - 49523213
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||| |||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  49523160 atcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattt 49523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 417
Target Start/End: Complemental strand, 43779991 - 43779899
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    ||||||| | |||| || || |||||||| ||| || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  43779991 gagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 43779899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 319 - 438
Target Start/End: Complemental strand, 41708527 - 41708408
Alignment:
Q  319 taaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 418  Q
    ||||| ||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41708527 taaatagagtgaatcatcaacttagtctctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 41708428  T
Q  419 attgtcaatcaatttagtcc 438  Q
    ||||||||||||||||||||    
T  41708427 attgtcaatcaatttagtcc 41708408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 15373981 - 15373866
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  15373981 ttgagtgaatcatcaacttagtccctgaattatcacaggtcggccaaattcgttcctcaattatgcgaaatatcaatttaattcctgaatttgttaattg 15373882  T
Q  423 tcaatcaatttagtcc 438  Q
    ||||||||||||||||    
T  15373881 tcaatcaatttagtcc 15373866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 324 - 438
Target Start/End: Complemental strand, 41234 - 41120
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    |||||||||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41234 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttattaattgt 41135  T
Q  424 caatcaatttagtcc 438  Q
    |||||||||||||||    
T  41134 caatcaatttagtcc 41120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 11021533 - 11021646
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11021533 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 11021632  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  11021633 aatcaagttagtcc 11021646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 28248267 - 28248156
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    |||||||||||||||||| || |||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28248267 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 28248168  T
Q  424 caatcaatttag 435  Q
    ||||||| ||||    
T  28248167 caatcaagttag 28248156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 325 - 443
Target Start/End: Original strand, 33193 - 33311
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  33193 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgtgaaatatcaatttaatccctgaatttgttaaatgtc 33292  T
Q  425 aatcaatttagtccctttg 443  Q
    |||||| ||||||| ||||    
T  33293 aatcaagttagtccttttg 33311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 41706539 - 41706628
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| |||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41706628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 325 - 443
Target Start/End: Complemental strand, 42880902 - 42880784
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| | |||| |||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||| | ||    
T  42880902 gagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccataaatttgttaaatttc 42880803  T
Q  425 aatcaatttagtccctttg 443  Q
    |||||| ||||||| ||||    
T  42880802 aatcaagttagtccttttg 42880784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 437
Target Start/End: Complemental strand, 37418860 - 37418748
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || | |||||| |||||| |||||||||||||||| | |||||||| |||||||||| |||||||| |||||||||| ||||    
T  37418860 gagtgaatcatcaacttcgtacttgaattttcacgggtcggccaaattcgtcctttaattatgcaaaatatcaatctaatccctaaatttgttaaatgtc 37418761  T
Q  425 aatcaatttagtc 437  Q
    |||||| ||||||    
T  37418760 aatcaagttagtc 37418748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 15372498 - 15372588
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||||| |||||| ||||| |||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  15372498 tgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaattt 15372588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 333 - 414
Target Start/End: Original strand, 39564 - 39645
Alignment:
Q  333 catcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||| ||||| |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39564 catcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 39645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 437
Target Start/End: Complemental strand, 42003582 - 42003469
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    |||||||||||| ||||| |||| |||||| | | ||||| | ||||||||| | ||||||||||||||||||||||||||| ||||||||||||| |||    
T  42003582 tgagtgaatcattaacttcgttcttgaatttttaaggatcagtcaaattcgttcatcaattatgcgaaatatcaatttaatctctgaatttgttaaatgt 42003483  T
Q  424 caatcaatttagtc 437  Q
    ||||||| ||||||    
T  42003482 caatcaagttagtc 42003469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 29909784 - 29909693
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || |||||||| |||||  |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||    
T  29909784 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgt 29909693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 416
Target Start/End: Original strand, 37417296 - 37417364
Alignment:
Q  348 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||| ||| || |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  37417296 tgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 37417364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 17949018 - 17948905
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || | ||||||  || | ||| |||||| |||||||  |||| ||||||||||||||||  ||| ||||||||| || ||||    
T  17949018 gagtgaatcatcaacttcgtccatgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaatttcgtccttgaatttgtaaaatgtc 17948919  T
Q  425 aatcaatttagtcc 438  Q
    ||||||||| ||||    
T  17948918 aatcaatttcgtcc 17948905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 361445 - 361560
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || | |||||| ||| | |||||||||| || ||||||||||||| |||||||||| ||| ||  |||||| || |   |||    
T  361445 gagtgaatcatcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtc 361544  T
Q  425 aatcaatttagtccct 440  Q
     |||||||||||||||    
T  361545 catcaatttagtccct 361560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 15432365 - 15432419
Alignment:
Q  362 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||| ||||||| |||||||||||||||||||||||||||| || ||||||||||    
T  15432365 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgt 15432419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 14389192 - 14389139
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  14389192 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 14389139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 416
Target Start/End: Original strand, 42001609 - 42001701
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||| |||||| || || | |||||| | |||| | | |||||||  |||||| ||||||||||||||||||||||||| |||||||||    
T  42001609 tgagtgaaccatcaaattcgtccttgaatttttacgggttgtccaaatttatccctctattatgcgaaatatcaatttaatccttgaatttgt 42001701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 39521 - 39430
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || || ||||| |||||  || ||||| || || |||||||||||||||||||||| ||| |||||||||||||    
T  39521 gagtgaaccatcaaatttgtccccgaattttcacgcgtcagccaactttgtacctcaattatgcgaaatatcaacttagtccctgaatttgt 39430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 24205634 - 24205713
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||||    
T  24205634 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccct 24205713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 25619697 - 25619751
Alignment:
Q  362 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||| ||||||| |||||||||||||| ||||||||| ||| |||||||||||||    
T  25619697 tcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgt 25619751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 16763112 - 16763165
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  16763112 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 16763165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 16764664 - 16764611
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  16764664 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 24208150 - 24208097
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||||| ||||||||||| ||| |||||||||||    
T  24208150 atcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 24208097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 365 - 414
Target Start/End: Original strand, 40560263 - 40560312
Alignment:
Q  365 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  40560263 gccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 40560312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 92470 - 92380
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || |||||||| ||||| ||| | ||| ||||| |||||||||||||||||||||| ||| ||  |||||||||    
T  92470 gagtgaaccatcaaatt-gtccctgaattttcacgcatcagtcaacttcgtacctcaattatgcgaaatatcaacttagtctttgaatttgt 92380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 14387385 - 14387464
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  14387385 atcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaataagtccct 14387464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 37022238 - 37022159
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||| |||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||||    
T  37022238 atcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccct 37022159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 6786089 - 6786036
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| ||||||  |||||||||| ||| |||||||||||    
T  6786089 atcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattt 6786036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 19908354 - 19908301
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||||||||| |||||| |||| ||||||||||| ||||| ||| |||||||    
T  19908354 atcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattt 19908301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 39664856 - 39664803
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||  |||| | ||||||||| ||||| |||||||||||    
T  39664856 atcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattt 39664803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 433
Target Start/End: Complemental strand, 7745323 - 7745255
Alignment:
Q  365 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaattt 433  Q
    |||||| |||||||  |||| ||||||||||||||||  | | ||||||||| || |||||||||||||    
T  7745323 gccaaaatcgtccccaaattttgcgaaatatcaatttcgttcttgaatttgtaaaatgtcaatcaattt 7745255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 417
Target Start/End: Complemental strand, 11023128 - 11023045
Alignment:
Q  333 catcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    |||||| || || |||||||| ||| || ||||||||||||||||| |||||   |||||||||||  || ||||||||||||||    
T  11023128 catcaatttcgtccctgaattttcaggg-tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtt 11023045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 2e-50; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 27952591 - 27952478
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27952591 gagttaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 27952492  T
Q  425 aatcaatttagtcc 438  Q
    ||||||||||||||    
T  27952491 aatcaatttagtcc 27952478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 317 - 438
Target Start/End: Complemental strand, 31803799 - 31803678
Alignment:
Q  317 tataaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||| |||||||||||||||||| || |||||||| |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  31803799 tataaaatgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgt 31803700  T
Q  417 taattgtcaatcaatttagtcc 438  Q
    ||| |||||||||| |||||||    
T  31803699 taaatgtcaatcaagttagtcc 31803678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 324 - 438
Target Start/End: Original strand, 11152544 - 11152658
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    |||||||||||||||||| || |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  11152544 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaatgt 11152643  T
Q  424 caatcaatttagtcc 438  Q
    ||||||| |||||||    
T  11152644 caatcaagttagtcc 11152658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 5784958 - 5784845
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5784958 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 5784859  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  5784858 aatcaagttagtcc 5784845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 45379085 - 45379198
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||||| |||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  45379085 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctaaatttgttaaatgtc 45379184  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  45379185 aatcaagttagtcc 45379198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 438
Target Start/End: Original strand, 47264123 - 47264237
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    |||||||| |||||| ||||| |||||||| |||||  |||||||| || |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  47264123 tgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaatttagtccctcaattatgcgaaatttcaatttcatccctgaatttgttaattgt 47264222  T
Q  424 caatcaatttagtcc 438  Q
    |||||||||||||||    
T  47264223 caatcaatttagtcc 47264237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 324 - 430
Target Start/End: Original strand, 18180499 - 18180605
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    |||||||||| ||||||| || |||||||| |||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||    
T  18180499 tgagtgaatcctcaactttgtccctgaattttcacgactcggccaaattcatccctcaattatgcgaaatatcaatttaattcctgaatttgttaaatgt 18180598  T
Q  424 caatcaa 430  Q
    |||||||    
T  18180599 caatcaa 18180605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 325 - 435
Target Start/End: Original strand, 35478087 - 35478197
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||||||||||  | |||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  35478087 gagtgaatcatcaacttcatccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaatttattaaatgtc 35478186  T
Q  425 aatcaatttag 435  Q
    |||||| ||||    
T  35478187 aatcaagttag 35478197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 33679259 - 33679372
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||||||| || || | |||||| | |||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  33679259 gagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtc 33679358  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  33679359 aatcaagttagtcc 33679372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 42136335 - 42136222
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| |||||| |||| | | ||||||| ||| ||||||| | ||||||||||||||||||||||||||||||||||||||| ||||    
T  42136335 gagtgaatcatcaacttcgttcctaaatttttatggatcggtcaacttcgtcctttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 42136236  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  42136235 aatcaagttagtcc 42136222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 325 - 437
Target Start/End: Complemental strand, 44159385 - 44159273
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||| |||||| ||| ||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||    
T  44159385 gagtgaatcatcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaatttgttaaatgtc 44159286  T
Q  425 aatcaatttagtc 437  Q
    |||||| ||||||    
T  44159285 aatcaagttagtc 44159273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 326 - 438
Target Start/End: Original strand, 46636766 - 46636878
Alignment:
Q  326 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 425  Q
    |||||||||||||||| ||  ||||||| |||||| ||||| || ||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||    
T  46636766 agtgaatcatcaacttcgtctctgaattttcacgggtcggctaacttcgtccttcaattatgcgaaatatcaatttaatttctgaatttgttaaatgtca 46636865  T
Q  426 atcaatttagtcc 438  Q
    ||||| |||||||    
T  46636866 atcaagttagtcc 46636878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 27940608 - 27940697
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| ||||| |||||||| |||| | | || |||||||||||||||||||||||||||||||||||||||| |||||||    
T  27940608 gagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaattt 27940697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 320 - 416
Target Start/End: Complemental strand, 46638936 - 46638840
Alignment:
Q  320 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||||||| |||||| || ||||||||||| |||||  |||||||| ||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  46638936 aaattgagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgt 46638840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 35480099 - 35480008
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| ||||||||| || | |||||| ||||||||| ||||||||| |||||||||||||||||||||||| ||||||  |||||||||    
T  35480099 gagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgt 35480008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 435
Target Start/End: Complemental strand, 6577195 - 6577086
Alignment:
Q  326 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 425  Q
    |||||||||||||||| || |||||  | | | || ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||  ||| |||||    
T  6577195 agtgaatcatcaacttcgtccctgacattttatgggtcggctaaattagtccttcaattatgcgaaatatcaatttaatccctgaatttactaaatgtca 6577096  T
Q  426 atcaatttag 435  Q
    ||||| ||||    
T  6577095 atcaagttag 6577086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 47269582 - 47269489
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||||| |||||| || || |||||||| |||||  ||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||    
T  47269582 ttgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgt 47269489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 33685372 - 33685281
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || |||||||| | |||| |||| ||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttaatcattgaatttgt 33685281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 416
Target Start/End: Complemental strand, 36895635 - 36895543
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||| |||||| || || |||||||| |||||  |||| ||| ||||||| |||||||||||||||||||| ||| |||||||||||||    
T  36895635 tgagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgt 36895543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 44157458 - 44157526
Alignment:
Q  350 aattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 418  Q
    |||| |||||| |||||||||||| |||||||||||||| ||||||||| ||| |||||||||||||||    
T  44157458 aattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtta 44157526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 416
Target Start/End: Original strand, 42134482 - 42134573
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || | |||||| | |||| ||||||||| || |||||||||||||||||||||||| ||| |||||||||||||    
T  42134482 gagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 42134573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 18184044 - 18183976
Alignment:
Q  348 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||| | |||| ||||||||| || |||||||||||||||||||||||| ||| |||||||||||||    
T  18184044 tgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 18183976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 26223623 - 26223702
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| |||||||||    
T  26223623 atcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccct 26223702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 46582046 - 46582125
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  46582046 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 46582125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 4856054 - 4856001
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||| ||||||| |||| ||||||||||||| ||| |||||||||||    
T  4856054 atcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 4856001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 31238583 - 31238530
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||||||||| |||||| |||| ||||||||||| ||||| |||||||||||    
T  31238583 atcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 31238530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 34778226 - 34778173
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||| ||||||| |||| ||||||||||||| ||| |||||||||||    
T  34778226 atcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 34778173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 36894826 - 36894890
Alignment:
Q  329 gaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaat 393  Q
    ||||||||||||| || |||||||| | |||| |||||||| ||||||  |||||||||||||||    
T  36894826 gaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtcattcaattatgcgaaat 36894890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 9120075 - 9120154
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||||    
T  9120075 atcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccct 9120154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 33599254 - 33599333
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||||||||||| | |||| ||||||||||||| |||||| ||||||||   || |||||||||| | |||||||    
T  33599254 atcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcagtccct 33599333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 15104476 - 15104530
Alignment:
Q  360 gatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||| ||||||||||| ||| |||| ||||||||||| ||||| |||||||||||    
T  15104476 gatcagccaaattcgttcctgaattttgcgaaatatctatttagtccctgaattt 15104530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 31801670 - 31801724
Alignment:
Q  362 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||| ||| |||||||||||||||||||||||||||| ||| ||| | |||||||    
T  31801670 tcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgt 31801724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 9121756 - 9121703
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  9121756 atcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 9121703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 25279037 - 25278988
Alignment:
Q  365 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||| ||| |||| ||||||||||| ||||| |||||||||||    
T  25279037 gccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattt 25278988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 27087319 - 27087372
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| |||||| |||||| |||| ||||||||||| ||||| |||||||||||    
T  27087319 atcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 27087372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 34776605 - 34776658
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  34776605 atcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 45381066 - 45381017
Alignment:
Q  367 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||||||||||||||||||||| ||| | | |||||||||    
T  45381066 caaattcatccctcaattatgcgaaatatcaacttagttcatgaatttgt 45381017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 438
Target Start/End: Complemental strand, 51123590 - 51123533
Alignment:
Q  381 aattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 438  Q
    |||| ||||||||||||||||  ||||||||||| | || ||||||||||||| ||||    
T  51123590 aattttgcgaaatatcaatttcgtccctgaatttataaaatgtcaatcaatttcgtcc 51123533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 438
Target Start/End: Complemental strand, 34041878 - 34041806
Alignment:
Q  366 ccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 438  Q
    |||||||||||||||||||   ||||  |||||  || ||||||||||||| || ||||||| ||||||||||    
T  34041878 ccaaattcgtccctcaatttaacgaataatcaaaatagtccctgaatttgtaaaatgtcaataaatttagtcc 34041806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 1e-48; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 324 - 438
Target Start/End: Original strand, 31199484 - 31199598
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  31199484 tgagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtcccttaattatgagaaatatcaatttaatccctgaatttgttaattgt 31199583  T
Q  424 caatcaatttagtcc 438  Q
    |||||||||||||||    
T  31199584 caatcaatttagtcc 31199598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 323 - 435
Target Start/End: Complemental strand, 32824364 - 32824252
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  32824364 ttgagtgaatcatcaactttgtttctgaattttcacgggtcggccaaattagtccctcaattatgcgaaatatcaatttaatcactgaatttgttaaatg 32824265  T
Q  423 tcaatcaatttag 435  Q
    |||||||| ||||    
T  32824264 tcaatcaagttag 32824252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 31823569 - 31823454
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    ||||||| ||||||||||| || |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  31823569 ttgagtggatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgttaaatg 31823470  T
Q  423 tcaatcaatttagtcc 438  Q
    |||||||| |||||||    
T  31823469 tcaatcaagttagtcc 31823454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 33748332 - 33748445
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||||| |||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  33748332 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaattcctgaatttgttaaatgtc 33748431  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  33748432 aatcaagttagtcc 33748445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 438
Target Start/End: Original strand, 40019155 - 40019269
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    |||||||||||||||||| ||   |||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40019155 tgagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 40019254  T
Q  424 caatcaatttagtcc 438  Q
    ||||||| |||||||    
T  40019255 caatcaagttagtcc 40019269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 24526894 - 24527009
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    |||||| ||||||| |||| || ||||||||  ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  24526894 ttgagtaaatcatccacttcgtccctgaatttacacgggtcggccaacttcgtccctcaattatgtgaaatatcaatttaatccctgaatttgttaaatg 24526993  T
Q  423 tcaatcaatttagtcc 438  Q
    |||||||| |||||||    
T  24526994 tcaatcaagttagtcc 24527009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 461181 - 461294
Alignment:
Q  330 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatca 429  Q
    |||||||||||| || | |||||| |||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||| |||||||||    
T  461181 aatcatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaataacaatttaatccctgaatttgttaaatgtcaatca 461280  T
Q  430 atttagtccctttg 443  Q
    | ||||||| ||||    
T  461281 agttagtccttttg 461294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 329 - 438
Target Start/End: Original strand, 42894780 - 42894889
Alignment:
Q  329 gaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatc 428  Q
    ||||||||||||| ||   |||||| |||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42894780 gaatcatcaactttgtctttgaattttcacgggtcgaccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatc 42894879  T
Q  429 aatttagtcc 438  Q
    || |||||||    
T  42894880 aagttagtcc 42894889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 31201267 - 31201178
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| ||||| |||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31201267 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaattt 31201178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 430
Target Start/End: Complemental strand, 9876653 - 9876548
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| ||| ||||||| |||| ||||||  || ||| ||||| |||||||| ||||||||||||||| |||||||||||||| ||||    
T  9876653 gagtgaatcatcaactttgtttctgaattttcactgatcggttaacttcatcccttaattatgcaaaatatcaatttaatacctgaatttgttaaatgtc 9876554  T
Q  425 aatcaa 430  Q
    ||||||    
T  9876553 aatcaa 9876548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 33368759 - 33368872
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||||||| || ||   |||||| | ||| ||||| | ||||| || ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  33368759 gagtgaatcatcaaattcgtctttgaatttttacgaatcggtcgaattcatctctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtc 33368858  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  33368859 aatcaagttagtcc 33368872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 371 - 437
Target Start/End: Complemental strand, 1322359 - 1322293
Alignment:
Q  371 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtc 437  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| ||||||    
T  1322359 ttcgtccctcaattatgcaaaatatcaatttaatccctgaatttgttaaatatcaatcaagttagtc 1322293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 357 - 434
Target Start/End: Complemental strand, 8656044 - 8655969
Alignment:
Q  357 acggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaattta 434  Q
    |||| |||| ||||||||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8656044 acgggtcggtcaaattcgtc--tcaactatgcgaaatatcaatttaatcccagaatttgttaattgtcaatcaattta 8655969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 438
Target Start/End: Complemental strand, 25373718 - 25373600
Alignment:
Q  320 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaa 419  Q
    |||| |||||||||||||| ||  | | |||||| ||||| ||||||||||||| | |||||||||||||||||||||| ||||| ||||||||||| |     
T  25373718 aaatcgagtgaatcatcaagttcatccttgaattttcacgcatcggccaaattcattcctcaattatgcgaaatatcaacttaattcctgaatttgtcag 25373619  T
Q  420 ttgtcaatcaatttagtcc 438  Q
      ||||||||| |||||||    
T  25373618 acgtcaatcaagttagtcc 25373600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 37524858 - 37524971
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||| ||| ||| || | |||||| | |||| |||| ||||||| ||||| ||||||| ||||||||||| ||||| ||||||||||||| ||||    
T  37524858 gagtgaatcctcaccttcgtccttgaatttttacgggtcggtcaaattcatcccttaattatgtgaaatatcaatctaatctctgaatttgttaaatgtc 37524957  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  37524958 aatcaagttagtcc 37524971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 416
Target Start/End: Complemental strand, 25707397 - 25707301
Alignment:
Q  320 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||| |||||||||||||| ||  | | | |||| | ||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  25707397 aaatcgagtgaatcatcaagttcatccttaaatttttacgcatcggccaaattcatccctcaattatgcgaaatatcaacttaatccctgaatttgt 25707301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 324 - 416
Target Start/End: Complemental strand, 38882922 - 38882830
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||| |||||| || || | |||||| ||||||||||| ||||||| ||| |||| ||||||| |||||||||||||||||||||||||    
T  38882922 tgagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgt 38882830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 440
Target Start/End: Complemental strand, 9186737 - 9186621
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    |||||||||||||||||  || | ||||||  || ||||| |||||| |||||||  |||||||||||||||||| ||| ||||| ||||||  |  |||    
T  9186737 tgagtgaatcatcaactccgtccttgaatttacaaggatcagccaaaatcgtccccaaattatgcgaaatatcaaattagtccctaaatttggcatatgt 9186638  T
Q  424 caatcaatttagtccct 440  Q
    |||||||||||||||||    
T  9186637 caatcaatttagtccct 9186621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 440
Target Start/End: Complemental strand, 23811657 - 23811541
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    ||||| ||| |||||||| || ||||||||  ||||||||||||||||||||||| ||||| | | |||||||||  || ||| ||||||||| || |||    
T  23811657 tgagtaaattatcaacttcgtccctgaattcgcacggatcggccaaattcgtcccccaattttacaaaatatcaaaatagtccttgaatttgtaaaatgt 23811558  T
Q  424 caatcaatttagtccct 440  Q
    || ||||||| ||||||    
T  23811557 cagtcaatttcgtccct 23811541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 379 - 438
Target Start/End: Original strand, 33158710 - 33158769
Alignment:
Q  379 tcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 438  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| || |||||||    
T  33158710 tcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtcaattaagttagtcc 33158769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 361 - 416
Target Start/End: Complemental strand, 33750472 - 33750417
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 33750417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 42897900 - 42897807
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||||| |||||| |  || | |||||| | |||| |||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||    
T  42897900 ttgagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgt 42897807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 44620760 - 44620647
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || ||||||||  || | ||||| |||| |||||||  |||| ||| ||||||||||||  ||||||||||||| || || |    
T  44620760 gagtgaatcatcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaatttgtaaaatgac 44620661  T
Q  425 aatcaatttagtcc 438  Q
    ||||||||| ||||    
T  44620660 aatcaatttcgtcc 44620647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 416
Target Start/End: Original strand, 9184382 - 9184474
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||||||||||| || || | ||||||  |||| |||||||||||||||| | ||| || |||||||||||| ||| |||||||||||||    
T  9184382 tgagtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgt 9184474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 333 - 417
Target Start/End: Complemental strand, 28433832 - 28433748
Alignment:
Q  333 catcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    |||||| || || |||||||| ||| ||||||||||||||||||||||||||   |||||||||||  || ||||||||||||||    
T  28433832 catcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtt 28433748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 416
Target Start/End: Original strand, 32822360 - 32822452
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||| ||||||||| || | |||||| | | ||||||||||||||| ||||||||||||   ||||||||| ||| |||||||||||||    
T  32822360 tgagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgt 32822452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 416
Target Start/End: Original strand, 1320617 - 1320708
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || | | |||| |||||| ||||| |||||| |||||||||||||| ||||||||| ||| |||||||||||||    
T  1320617 gagtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgt 1320708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 42943479 - 42943400
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||   || |||||||||| | |||||||    
T  42943479 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccct 42943400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 416
Target Start/End: Complemental strand, 462500 - 462403
Alignment:
Q  319 taaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||| ||||||| |||||| || ||   |||||| | || |||||||||||||| ||| |||||||||||||||||||| ||| ||| |||||||||    
T  462500 taaatagagtgaaccatcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgt 462403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 8609895 - 8609842
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  8609895 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 8609842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 13282514 - 13282567
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  13282514 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 13282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 38548884 - 38548831
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||    
T  38548884 atcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 399
Target Start/End: Original strand, 38881429 - 38881502
Alignment:
Q  326 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaat 399  Q
    ||||||||||||| || || | |||||| ||||| ||| ||||||||| ||||||||||||||||||| |||||    
T  38881429 agtgaatcatcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattatgcgaaatgtcaat 38881502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 438
Target Start/End: Original strand, 25370579 - 25370639
Alignment:
Q  378 ctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 438  Q
    |||||||||| ||||||  |||||||||||||||||||| || |||||||||| |||||||    
T  25370579 ctcaattatgggaaataaaaatttaatccctgaatttgtcaaatgtcaatcaagttagtcc 25370639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 441
Target Start/End: Original strand, 27404246 - 27404326
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccctt 441  Q
    ||||||||| ||||||||| |||||| |||||||||||  || ||||| ||||| | || |||||||||| ||||||||||    
T  27404246 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaatttataaaatgtcaatcaaattagtccctt 27404326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 33160249 - 33160181
Alignment:
Q  348 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||| |||| | |||||||||||| ||||||||||||| |||||||||| ||| || ||||||||||    
T  33160249 tgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgt 33160181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 601757 - 601678
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||||    
T  601757 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccct 601678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 13106840 - 13106919
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||| ||||| |||| ||||||||||||| ||| ||||||||||| | || | |||||||| |||||||||    
T  13106840 atcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttataaaatttcaatcaaattagtccct 13106919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 15308314 - 15308235
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||||| ||||||||||| ||| |||||||||||   || |||||||||| |||| ||||    
T  15308314 atcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagcccct 15308235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 15488683 - 15488604
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||||| ||||||||||| ||| |||||||||||   || |||||||||| |||| ||||    
T  15488683 atcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagcccct 15488604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 31821417 - 31821507
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||  ||||| || || |||||||| ||||   |||| ||| |||||||||||||||||||||||||||| ||| |||| ||||||    
T  31821417 tgagtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaattt 31821507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 414
Target Start/End: Complemental strand, 37526148 - 37526058
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||||| |||||| || || | |||||| |||||  |||| ||||||| | | |||||||||||||||||||| ||| |||||||||||    
T  37526148 tgagtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaattt 37526058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 8654500 - 8654588
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| |||||  ||||||| | |||  |||| ||||||||| |||||||||||||||||||| ||||||| | |||||||    
T  8654500 gagtgaaccatcaatttagtctctgaatttttacgagtcggtcaaattcgttcctcaattatgcgaaatatc-atttaattcttgaattt 8654588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 440
Target Start/End: Original strand, 11031463 - 11031544
Alignment:
Q  359 ggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||| ||||||| |||| |  ||||||||||||||||||| ||| | ||||| ||||| |  ||||||||||||||||||||    
T  11031463 ggatgggccaaaatcgttctccaattatgcgaaatatcaaattagttcctgagtttgtcatatgtcaatcaatttagtccct 11031544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 27691190 - 27691243
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  27691190 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 27691243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 29237187 - 29237266
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||||    
T  29237187 atcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccct 29237266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 29239240 - 29239161
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || | |||||||| |||||||||    
T  29239240 atcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaatttacaaaatatcaatcaaattagtccct 29239161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 440
Target Start/End: Original strand, 33761109 - 33761184
Alignment:
Q  365 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  33761109 gccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 33761184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 414
Target Start/End: Complemental strand, 9673266 - 9673220
Alignment:
Q  368 aaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||||||||| |||| || |||||||| |||||||||||||||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattt 9673220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 5075368 - 5075457
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||| || | ||||||  || | ||| |||||| |||||||  |||| ||||||||||||||||  ||| |||||||    
T  5075368 gagtgaatcatcaacttcgtccttgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaattttgtccttgaattt 5075457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 13108444 - 13108391
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||| |||| ||||||| |||| ||||||||||||| ||| |||||||||||    
T  13108444 atcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 13108391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 437
Target Start/End: Original strand, 25356348 - 25356461
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 423  Q
    ||||||||| ||||| || || | |||||| ||||| ||||| ||||  ||||  | ||||||| |||||| ||||||||||| || |||||| || |||    
T  25356348 tgagtgaattatcaaattcgtccttgaattttcacgcatcggtcaaaaacgtcttttaattatgggaaataacaatttaatccttgtatttgtcaaatgt 25356447  T
Q  424 caatcaatttagtc 437  Q
    || |||| ||||||    
T  25356448 cactcaagttagtc 25356461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 26242418 - 26242369
Alignment:
Q  365 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||| |||| ||||||||||| ||||| || ||||||||    
T  26242418 gccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattt 26242369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 27692890 - 27692837
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| ||| ||||||||| ||| |||||||||||    
T  27692890 atcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 430
Target Start/End: Original strand, 33707242 - 33707311
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaa 430  Q
    ||||| ||| ||||||||| |||| | ||||||||||| ||| ||||||||||| | || ||||||||||    
T  33707242 atcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtcaatcaa 33707311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 33762766 - 33762713
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  33762766 atcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 34681119 - 34681078
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaattta 402  Q
    ||||||||||||||||||| |||| ||||||||||| |||||    
T  34681119 atcggccaaattcgtccctgaattttgcgaaatatctattta 34681078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 35509250 - 35509303
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  35509250 atcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 38547264 - 38547317
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||| ||||| | |||| ||||||||||||| ||| |||||||||||    
T  38547264 atcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattt 38547317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 8608273 - 8608353
Alignment:
Q  361 atcggccaaattcgtccctcaa-ttatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||| ||||||||| || || ||||||||||||| ||| ||||||||||| | || |||||||||| | |||||||    
T  8608273 atcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccct 8608353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 10267861 - 10267921
Alignment:
Q  348 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccct 408  Q
    |||||| | ||| ||||| |||| |||||| | ||||||||||||||| ||||||||||||    
T  10267861 tgaatttttacgaatcggtcaaaatcgtcctttaattatgcgaaatattaatttaatccct 10267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 28432241 - 28432293
Alignment:
Q  330 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaa 382  Q
    |||||||||||| || ||||||||  ||| ||||||||||| |||||||||||    
T  28432241 aatcatcaacttggtccctgaatttgcactgatcggccaaaatcgtccctcaa 28432293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 9e-40; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 33111839 - 33111954
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    ||||||||||||||||||| || |||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33111839 ttgagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatg 33111938  T
Q  423 tcaatcaatttagtcc 438  Q
    |||||||| |||||||    
T  33111939 tcaatcaagttagtcc 33111954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 40508493 - 40508606
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  40508493 gagtgaatcatcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattatgcgaaatctcaatttaatccctgaatttgttaaatgtc 40508592  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  40508593 aatcaagttagtcc 40508606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 322 - 438
Target Start/End: Complemental strand, 1847739 - 1847623
Alignment:
Q  322 attgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaatt 421  Q
    ||||||||||||||||| || || | |||||| |||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |    
T  1847739 attgagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaatttgttaaat 1847640  T
Q  422 gtcaatcaatttagtcc 438  Q
    ||||||||| |||||||    
T  1847639 gtcaatcaagttagtcc 1847623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 325 - 437
Target Start/End: Complemental strand, 48635464 - 48635352
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||||||| || || |||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  48635464 gagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 48635365  T
Q  425 aatcaatttagtc 437  Q
    ||| || ||||||    
T  48635364 aattaagttagtc 48635352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 325 - 436
Target Start/End: Original strand, 45897050 - 45897161
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || | |||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45897050 gagtgaatcatcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 45897149  T
Q  425 aatcaatttagt 436  Q
    |||||| |||||    
T  45897150 aatcaagttagt 45897161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 325 - 437
Target Start/End: Original strand, 33850982 - 33851094
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||||||| || ||||||||||| |||||| |||| ||| |||||||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  33850982 gagtgaatcatcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattatccgaaatatcaatttaatctctgaatttgttaaatgtc 33851081  T
Q  425 aatcaatttagtc 437  Q
    |||||| ||||||    
T  33851082 aatcaagttagtc 33851094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 40998515 - 40998628
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||| |||||| ||||| |||||||| |||||  |||| |||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  40998515 gagtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgttaattgtc 40998614  T
Q  425 aatcaatttagtcc 438  Q
    ||||||||||||||    
T  40998615 aatcaatttagtcc 40998628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 23887198 - 23887311
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || | |||||| | | || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  23887198 gagtgaatcatcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttcaatgtc 23887297  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  23887298 aatcaagttagtcc 23887311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 329 - 437
Target Start/End: Original strand, 18428753 - 18428860
Alignment:
Q  329 gaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatc 428  Q
    ||||||||||||| || |||||||| | |||| |||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  18428753 gaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatctc-gaatttgttaaatgtcaatc 18428851  T
Q  429 aatttagtc 437  Q
    || ||||||    
T  18428852 aagttagtc 18428860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 322 - 416
Target Start/End: Original strand, 23774149 - 23774243
Alignment:
Q  322 attgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||||| |||||| || || | |||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23774149 attgagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgt 23774243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 371 - 437
Target Start/End: Original strand, 37865430 - 37865496
Alignment:
Q  371 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtc 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  37865430 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtc 37865496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 45255486 - 45255596
Alignment:
Q  328 tgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaat 427  Q
    |||||||||||||| || |||||||| | ||||||||| ||| ||| || ||||||||||| |||||| | ||||||||||||||||||||| |||||||    
T  45255486 tgaatcatcaacttcgtccctgaatttttacggatcggtcaacttcatcactcaattatgcaaaatattactttaatccctgaatttgttaaatgtcaat 45255585  T
Q  428 caatttagtcc 438  Q
    ||| |||||||    
T  45255586 caagttagtcc 45255596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 2975460 - 2975573
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    |||||||||| ||| || || | |||||| | ||||||| || |||||| ||||||||| ||||||||||||||||||||||||||||||||||| | ||    
T  2975460 gagtgaatcaccaaattcgtccttgaatttttacggatcagctaaattcatccctcaatgatgcgaaatatcaatttaatccctgaatttgttaaatttc 2975559  T
Q  425 aatcaatttagtcc 438  Q
    |||||| |||||||    
T  2975560 aatcaagttagtcc 2975573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 40509037 - 40508944
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||||| |||||| || || | |||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  40509037 ttgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgt 40508944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 320 - 416
Target Start/End: Complemental strand, 41021132 - 41021036
Alignment:
Q  320 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||| ||||||| |||||| || || |||||||| |||||  ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  41021132 aaatagagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 41021036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 320 - 416
Target Start/End: Original strand, 48633872 - 48633968
Alignment:
Q  320 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||||||| |||||| || || | |||||| |||||| |||| ||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  48633872 aaattgagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgt 48633968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 416
Target Start/End: Complemental strand, 33113308 - 33113213
Alignment:
Q  321 aattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||||||| |||||| ||||| | |||||| | |||| ||||||||| || |||||||||||||||||||||||| ||| ||||| |||||||    
T  33113308 aattgagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgt 33113213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 2977455 - 2977362
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||||||||||| || || | |||||| | ||| ||||||||||||| ||||| |||||||||||||||||||| | ||||| |||||||    
T  2977455 ttgagtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgt 2977362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 24381767 - 24381824
Alignment:
Q  348 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatc 405  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24381767 tgaatttttacggatcggccaaattcatccctcaattatgcgaaatatcaatttaatc 24381824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 437
Target Start/End: Complemental strand, 33051556 - 33051444
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || ||| ||||  || | |||  ||||| |||||||| |||| ||| ||||||||||||  ||||||||||||| || ||||    
T  33051556 gagtgaatcatcaacttcgtccctaaatttgcaagcatcaaccaaaatcgtccctaaattttgcaaaatatcaatttcgtccctgaatttgtaaaatgtc 33051457  T
Q  425 aatcaatttagtc 437  Q
    |||||||||||||    
T  33051456 aatcaatttagtc 33051444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 23888896 - 23888805
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || |||||||| ||||   |||||||| |||||||||||||||||||||||||||  ||| |||||||||||||    
T  23888896 gagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgt 23888805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 31887576 - 31887485
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || | |||||| ||||||||||| |||||||  || |||||||||||||||||||| ||| |||||||||||||    
T  31887576 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgt 31887485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 40963489 - 40963374
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || ||||||||  || | ||||| ||||||||| || |||||   |||||||| ||  || ||||||||||||| || ||||    
T  40963489 gagtgaatcatcaacttcgtccctgaatttgcatgaatcggtcaaattcgttccccaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgtc 40963390  T
Q  425 aatcaatttagtccct 440  Q
    ||||||||||||||||    
T  40963389 aatcaatttagtccct 40963374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 45257344 - 45257253
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || |||| |||||| |||||| |||||||||||| |||||||||||||  ||||||||| ||| | |||||||||||    
T  45257344 gagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgt 45257253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 416
Target Start/End: Complemental strand, 51454374 - 51454283
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || | |||||| ||||||||||||||||||| | |||||||||||||||||||||| ||| ||  |||||||||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgt 51454283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 438
Target Start/End: Original strand, 31885550 - 31885631
Alignment:
Q  357 acggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 438  Q
    |||| |||| ||||||| ||||| |||||||||||||||||||||| | | |||||||| ||| |||||||||| |||||||    
T  31885550 acgggtcggtcaaattcatcccttaattatgcgaaatatcaatttagtacttgaatttgctaaatgtcaatcaagttagtcc 31885631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 438
Target Start/End: Original strand, 49494477 - 49494589
Alignment:
Q  326 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 425  Q
    |||||||||||||||| || ||||||||  || | |||   |||| |||||||  |||| | |||||||||||||| |||||||||||||| || |||||    
T  49494477 agtgaatcatcaacttcgtccctgaatttgcaagcatcaatcaaaatcgtccccaaattttacgaaatatcaatttcatccctgaatttgtaaaatgtca 49494576  T
Q  426 atcaatttagtcc 438  Q
    |||||||| ||||    
T  49494577 atcaattttgtcc 49494589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 364 - 440
Target Start/End: Original strand, 53092662 - 53092738
Alignment:
Q  364 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||||| ||||||||| |||| ||||||||||||| ||||||||||||||| | || |||||||||| | |||||||    
T  53092662 ggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtcaatcaaatcagtccct 53092738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 412
Target Start/End: Complemental strand, 18430395 - 18430308
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaat 412  Q
    ||||||| |||||| || || | |||||| | |||| || ||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  18430395 gagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaat 18430308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 438
Target Start/End: Complemental strand, 23775677 - 23775631
Alignment:
Q  392 atatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 438  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  23775677 atatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 23775631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 2226260 - 2226207
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  2226260 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 2226207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 440
Target Start/End: Complemental strand, 41946192 - 41946075
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    |||||| ||||||||| || |||||||||||  ||| |||||| |||||| |||||||||||   |||||||||||  || ||| ||||||||| || ||    
T  41946192 ttgagtaaatcatcaatttggttcctgaatttgcactgatcggtcaaatttgtccctcaatttaacgaaatatcaaaatagtccatgaatttgtaaaatg 41946093  T
Q  423 tcaatcaatttagtccct 440  Q
    ||  ||||||| ||||||    
T  41946092 tccgtcaattttgtccct 41946075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 53190867 - 53190814
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  53190867 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 53190814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 23291606 - 23291685
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| || ||||||||   || |||||||||| | |||||||    
T  23291606 atcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatcaaatcagtccct 23291685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 46308843 - 46308922
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  46308843 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 46308922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 53094326 - 53094247
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  53094326 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatgagtccct 53094247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 416
Target Start/End: Complemental strand, 45898475 - 45898381
Alignment:
Q  322 attgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||||| |||||| || || |||||||| ||||   ||| |||| || |||||| |||||||||||||||||| ||| ||| |||||||||    
T  45898475 attgagtgaaccatcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgt 45898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 21348759 - 21348812
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  21348759 atcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 21348812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 27899189 - 27899136
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  27899189 atcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 27899136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 30501155 - 30501232
Alignment:
Q  363 cggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||||||||||||||| |||||   |||||||||||  || |  |||||||||| || ||||||||||||||||||||    
T  30501155 cggccaaattcgtcccccaatttaacgaaatatcaaaatagtttctgaatttgtaaaatgtcaatcaatttagtccct 30501232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 30600026 - 30599973
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||||||||| |||||| |||| ||||||||||| ||||| |||||||||||    
T  30600026 atcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 30599973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 35905820 - 35905767
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  35905820 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 35905767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 38193563 - 38193510
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  38193563 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 414
Target Start/End: Original strand, 41944584 - 41944665
Alignment:
Q  333 catcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    |||||| || || |||||||| ||| |||||||||||||||||||| |||||   |||||||||||  || |||||||||||    
T  41944584 catcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaattt 41944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 41979405 - 41979352
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  41979405 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 440
Target Start/End: Complemental strand, 46611346 - 46611277
Alignment:
Q  371 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| |||| ||||||||||||| ||| ||||||||||| | || |||||||||| | |||||||    
T  46611346 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccct 46611277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 54898473 - 54898526
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  54898473 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 54898526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 416
Target Start/End: Complemental strand, 24383018 - 24382926
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||||| |||||| || || | |||||| | |||| |||||||||||| ||| ||||||||| |||||||||| ||| ||| || ||||||    
T  24383018 tgagtgaaccatcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtccatggatttgt 24382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 440
Target Start/End: Original strand, 38191934 - 38192010
Alignment:
Q  364 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  38191934 ggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 38192010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 3150288 - 3150367
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  3150288 atcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 3150367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 28626447 - 28626526
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||| ||||||||| |||||| |||||||||||  || |||||||||||   || |||||||||| |||||||||    
T  28626447 atcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccct 28626526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Complemental strand, 33852744 - 33852705
Alignment:
Q  375 tccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  33852744 tccctcaattatgcgaaatatcaatttaatttctgaattt 33852705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 46609185 - 46609264
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| || |||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  46609185 atcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 46609264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 53187778 - 53187857
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  53187778 atcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 53187857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 54900127 - 54900048
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||  |||||||||||   || |||||||||| | |||||||    
T  54900127 atcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtcaatcaaatcagtccct 54900048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 3152326 - 3152273
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||| ||||| |||| ||||||||||||| ||| |||||||||||    
T  3152326 atcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 3152273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 41977786 - 41977839
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||||| ||||||| ||||  |||||||||||| ||| |||||||||||    
T  41977786 atcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattt 41977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 44794243 - 44794296
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||| ||||| |||| ||||||||||||| ||| |||||||||||    
T  44794243 atcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 44794296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 46310489 - 46310436
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  46310489 atcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 4e-36; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 325 - 438
Target Start/End: Complemental strand, 4646307 - 4646194
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||| |||||||||| | |||||||| | |||||||||  |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  4646307 gagtgaaccatcaacttaatccctgaatttttacggatcggttaaattcgtccatcaattatgcgaaatatcaatttaatccctaaatttgttaattgtc 4646208  T
Q  425 aatcaatttagtcc 438  Q
    ||||||||||||||    
T  4646207 aatcaatttagtcc 4646194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 29114869 - 29114754
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    ||||||||| |||||| ||||| |||||||| |||||  ||||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  29114869 ttgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccttcaattatgcgaaatttcaatttcatccctgaatttgttaattg 29114770  T
Q  423 tcaatcaatttagtcc 438  Q
    ||||||||||||||||    
T  29114769 tcaatcaatttagtcc 29114754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 325 - 435
Target Start/End: Original strand, 30639611 - 30639721
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||||||||||||| || |||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||  |||||||||||| ||||    
T  30639611 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatctatgaatttgttaaatgtc 30639710  T
Q  425 aatcaatttag 435  Q
    |||||| ||||    
T  30639711 aatcaacttag 30639721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 4641355 - 4641444
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| ||||| |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 4641444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 325 - 430
Target Start/End: Original strand, 17950561 - 17950666
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 424  Q
    ||||||| |||||| ||  | |||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 17950660  T
Q  425 aatcaa 430  Q
    ||||||    
T  17950661 aatcaa 17950666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 35174389 - 35174504
Alignment:
Q  323 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 422  Q
    ||||||||||||||||||| || |||||||| | |||| |||||||| |||||  ||||||||| |||||||||||||||||  ||||||||||||| ||    
T  35174389 ttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtttctcaattatacgaaatatcaatttaatttctgaatttgttaaatg 35174488  T
Q  423 tcaatcaatttagtcc 438  Q
    |||||||| |||||||    
T  35174489 tcaatcaagttagtcc 35174504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 414
Target Start/End: Original strand, 2968139 - 2968228
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| ||||| ||| |||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2968139 gagtgaaccatcaatttagtccctcaattttcacgggtctcccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 2968228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 325 - 416
Target Start/End: Original strand, 29112300 - 29112391
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| ||||| |||||||| |||||  ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  29112300 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 29112391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 416
Target Start/End: Original strand, 29077328 - 29077419
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||||| |||||| || || |||||||| |||||  ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  29077328 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 29077419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 326 - 440
Target Start/End: Complemental strand, 31210530 - 31210416
Alignment:
Q  326 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 425  Q
    |||||||||||| ||| |||| ||||||   | ||||||| |||| |||||||| ||||||||||||||| || | |||||||||||||||||  ||| |    
T  31210530 agtgaatcatcagcttcgttcttgaatttgtaaggatcggtcaaaatcgtcccttaattatgcgaaatattaaataaatccctgaatttgttatatgtaa 31210431  T
Q  426 atcaatttagtccct 440  Q
    |||||||||||||||    
T  31210430 atcaatttagtccct 31210416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 3018545 - 3018465
Alignment:
Q  336 caacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    |||||| || |||||||| |||||  |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  3018545 caacttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 3018465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 384
Target Start/End: Original strand, 4289423 - 4289477
Alignment:
Q  330 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaatt 384  Q
    |||||||||||| |||||||||||  ||| |||||| ||||||||||||||||||    
T  4289423 aatcatcaacttggttcctgaatttgcactgatcggtcaaattcgtccctcaatt 4289477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 13613670 - 13613617
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||| |||||||||||    
T  13613670 atcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattt 13613617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 417
Target Start/End: Complemental strand, 17952167 - 17952074
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    |||||||| |||||| || || |||||||| ||| || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  17952167 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 17952074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 32439179 - 32439126
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  32439179 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 32439126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 416
Target Start/End: Complemental strand, 34345416 - 34345324
Alignment:
Q  324 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 416  Q
    ||||| |||||||||||| || ||||||||  ||| ||||| |||||| ||||||||||||    ||||||||||  || |||||||||||||    
T  34345416 tgagtaaatcatcaacttggtccctgaatttgcactgatcgaccaaatccgtccctcaatttaatgaaatatcaaaatagtccctgaatttgt 34345324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 3480710 - 3480631
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||||| |||| | |||||||||||  || |||||||||||   || |||||||||| |||||||||    
T  3480710 atcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtcaatcaaattagtccct 3480631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 32454284 - 32454363
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||||||| | |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||||    
T  32454284 atcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccct 32454363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 32518550 - 32518471
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||||||| ||| ||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  32518550 atcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 32518471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 3456784 - 3456837
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  3456784 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 3456837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 20523402 - 20523455
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||| ||||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  20523402 atcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 20523455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 417
Target Start/End: Complemental strand, 35175987 - 35175895
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 417  Q
    ||||||| |||||| || || | |||||| ||| |||||||||||||||||| |  ||||   |||||||||||  || ||||||||||||||    
T  35175987 gagtgaaccatcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtt 35175895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 6758 - 6669
Alignment:
Q  325 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||| |||||| ||||| |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 437
Target Start/End: Original strand, 2121 - 2210
Alignment:
Q  348 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtc 437  Q
    |||||| | ||| |||| |||||||| |||||||||||||||||||||||| ||||||||| ||||||| |   ||||||||| ||||||    
T  2121 tgaatttttacgcatcgaccaaattcatccctcaattatgcgaaatatcaacttaatccctaaatttgtcagacgtcaatcaagttagtc 2210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 438
Target Start/End: Complemental strand, 2926 - 2869
Alignment:
Q  381 aattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 438  Q
    ||||||| |||||| ||||||||||| ||||||||| || ||||| |||| |||||||    
T  2926 aattatgagaaataacaatttaatccttgaatttgtcaaatgtcattcaagttagtcc 2869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Original strand, 1018 - 1097
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||||| || ||||||||| |||||| |||||||||||  || |||||||||||   || |||||||||| |||||||||    
T  1018 atcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccct 1097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 54311 - 54232
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    ||||| ||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||||    
T  54311 atcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccct 54232  T

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Target: scaffold0058 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 14396 - 14317
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccct 440  Q
    |||||| || ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| | |||||||    
T  14396 atcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 14317  T

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Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 3330 - 3383
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| || |||||| |||| ||||||||||||| ||| |||||||||||    
T  3330 atcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattt 3383  T

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Target: scaffold0058; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 4502 - 4555
Alignment:
Q  361 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 414  Q
    ||||||||| || |||||| |||| ||||||||||||| ||| |||||||||||    
T  4502 atcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattt 4555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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