View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16710_high_8 (Length: 250)
Name: NF16710_high_8
Description: NF16710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16710_high_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 34340086 - 34340335
Alignment:
| Q |
1 |
tgcactggaagaggaataggagaactccgaccagtgcctctactgaaatcatcaaattggtgactctgttcagcatcactgagtttttctacttgtccag |
100 |
Q |
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| T |
34340086 |
tgcactggaagaggaataggagaactccgaccagtgcctctactgaaatcatcaaattggtgactctgttcagcatcactgagtttttctacttgtccag |
34340185 |
T |
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| Q |
101 |
cttttgttggagtctcaacctgctcattcttagaatgatagaatacagatgaaaatattgtatctcaacttgtttgtctagaattgttcacaaactttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34340186 |
cttttgttggagtctcaacctgctcattcttagaatgatagaatacagatgaaaatattgtatctcaacttgtttgtctagaattgttcacaaactttct |
34340285 |
T |
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| Q |
201 |
taaaattaactgtaattatgagtatatctatgacttcatctctctcgacc |
250 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||| |||||| |
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| T |
34340286 |
taaaattaactgtaattatgagtatatctatgactttttctctttcgacc |
34340335 |
T |
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