View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16710_low_4 (Length: 426)
Name: NF16710_low_4
Description: NF16710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16710_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 14 - 410
Target Start/End: Complemental strand, 34340075 - 34339678
Alignment:
| Q |
14 |
atatttaccggaagtgaagaattattctaccagtaataaatctttctcattaaatctgttcataatgcattgttgtgctctagcttctcacttatcctca |
113 |
Q |
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| T |
34340075 |
atatttaccggaagagaagaattattctaccagtaataaatctttctcattaaatctgttcataatgcattgttgtgctctagcttctcacttgtcctca |
34339976 |
T |
|
| Q |
114 |
atctcctgatgtgtttagtatgaagaaaatataccattgttcctcaatcttcagcagtatataaataaacttcaattcatttcatcaaaaagttgtgagt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
34339975 |
atctcctgatgtgtttagtatgaagaaaatataccattgttcctcaatcttcagcagtatataaataaacttcaattcatttcatcaaaaagttgtcagt |
34339876 |
T |
|
| Q |
214 |
ttaaaatgcacttatcttcgacgttataaaactgtaaagaa-aatagtgtttggtatgtttagccttccggtttgagaacaaacttattgtgttctcctg |
312 |
Q |
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||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
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| T |
34339875 |
ttaaaatgcacttatcttcgatgttataaaactgtaaaaaataatagtgtttggtatgtttagccttccggtttgaggacaagcttattgtgttctcctg |
34339776 |
T |
|
| Q |
313 |
aaactggtaataacccttgctttagtcataaacaaataagactgaaggagctcattttaagggaccggattgacgccaacctaattattagggactaa |
410 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34339775 |
aaactggtaataacccttgctttattcataaacaaataagactcaaggagctcattttaagggaccggattgacgccaacctaattattagggactaa |
34339678 |
T |
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