View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16711_low_10 (Length: 254)

Name: NF16711_low_10
Description: NF16711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16711_low_10
NF16711_low_10
[»] chr4 (35 HSPs)
chr4 (16-188)||(43619181-43619353)
chr4 (210-254)||(22230471-22230515)
chr4 (219-254)||(40994140-40994175)
chr4 (220-254)||(22788711-22788745)
chr4 (220-254)||(24997471-24997505)
chr4 (220-254)||(43978007-43978041)
chr4 (221-254)||(3847681-3847714)
chr4 (221-254)||(6371114-6371147)
chr4 (221-254)||(8433660-8433693)
chr4 (221-254)||(8965094-8965127)
chr4 (221-254)||(23705190-23705223)
chr4 (221-254)||(24680123-24680156)
chr4 (221-254)||(26868349-26868382)
chr4 (221-254)||(26919505-26919538)
chr4 (221-254)||(35219537-35219570)
chr4 (221-254)||(35465435-35465468)
chr4 (221-254)||(37935861-37935894)
chr4 (221-254)||(39023175-39023208)
chr4 (221-254)||(40051622-40051655)
chr4 (221-254)||(43147421-43147454)
chr4 (221-254)||(43207669-43207702)
chr4 (221-254)||(43596895-43596928)
chr4 (221-254)||(44602485-44602518)
chr4 (221-254)||(45849047-45849080)
chr4 (221-254)||(46105535-46105568)
chr4 (221-254)||(46775067-46775100)
chr4 (221-254)||(48569213-48569246)
chr4 (221-254)||(48798279-48798312)
chr4 (221-254)||(49901482-49901515)
chr4 (221-254)||(51512046-51512079)
chr4 (221-254)||(55251388-55251421)
chr4 (222-254)||(30217600-30217632)
chr4 (222-254)||(34353780-34353812)
chr4 (218-254)||(39697899-39697935)
chr4 (221-253)||(45126132-45126164)
[»] chr1 (34 HSPs)
chr1 (217-254)||(9866221-9866258)
chr1 (220-254)||(24874970-24875004)
chr1 (221-254)||(1151759-1151792)
chr1 (221-254)||(1570229-1570262)
chr1 (221-254)||(3269619-3269652)
chr1 (221-254)||(4482635-4482668)
chr1 (221-254)||(6438101-6438134)
chr1 (221-254)||(6702576-6702609)
chr1 (221-254)||(6893274-6893307)
chr1 (221-254)||(7166264-7166297)
chr1 (221-254)||(8865854-8865887)
chr1 (221-254)||(10664831-10664864)
chr1 (221-254)||(15819638-15819671)
chr1 (221-254)||(16343028-16343061)
chr1 (221-254)||(21265656-21265689)
chr1 (221-254)||(22563386-22563419)
chr1 (221-254)||(25999850-25999883)
chr1 (221-254)||(26584783-26584816)
chr1 (221-254)||(32594251-32594284)
chr1 (221-254)||(33207205-33207238)
chr1 (221-254)||(33254728-33254761)
chr1 (221-254)||(33274900-33274933)
chr1 (221-254)||(35605660-35605693)
chr1 (221-254)||(40519581-40519614)
chr1 (221-254)||(42054333-42054366)
chr1 (221-254)||(42490447-42490480)
chr1 (221-254)||(46965740-46965773)
chr1 (221-254)||(48638532-48638565)
chr1 (221-254)||(50899547-50899580)
chr1 (222-254)||(2277755-2277787)
chr1 (222-254)||(11215002-11215034)
chr1 (222-254)||(34058215-34058247)
chr1 (221-253)||(34580824-34580856)
chr1 (221-253)||(51050190-51050222)
[»] chr6 (22 HSPs)
chr6 (219-254)||(8439673-8439708)
chr6 (221-254)||(607187-607220)
chr6 (221-254)||(2251838-2251871)
chr6 (221-254)||(3794210-3794243)
chr6 (221-254)||(4408358-4408391)
chr6 (221-254)||(7207844-7207877)
chr6 (221-254)||(7545329-7545362)
chr6 (221-254)||(7865392-7865425)
chr6 (221-254)||(9246419-9246452)
chr6 (221-254)||(9372238-9372271)
chr6 (221-254)||(9435626-9435659)
chr6 (221-254)||(10934599-10934632)
chr6 (221-254)||(15091448-15091481)
chr6 (221-254)||(17441876-17441909)
chr6 (221-254)||(19953865-19953898)
chr6 (221-254)||(30885607-30885640)
chr6 (221-254)||(33573817-33573850)
chr6 (220-252)||(3196618-3196650)
chr6 (222-254)||(3294765-3294797)
chr6 (218-250)||(4869739-4869771)
chr6 (221-253)||(7177295-7177327)
chr6 (218-254)||(15963980-15964016)
[»] chr5 (23 HSPs)
chr5 (219-254)||(23292454-23292489)
chr5 (212-254)||(41179840-41179883)
chr5 (220-254)||(35515511-35515545)
chr5 (221-254)||(1743127-1743160)
chr5 (221-254)||(4417722-4417755)
chr5 (221-254)||(4745913-4745946)
chr5 (221-254)||(6518813-6518846)
chr5 (221-254)||(9835033-9835066)
chr5 (221-254)||(11897248-11897281)
chr5 (221-254)||(12463756-12463789)
chr5 (221-254)||(12891557-12891590)
chr5 (221-254)||(16603398-16603431)
chr5 (221-254)||(17545209-17545242)
chr5 (221-254)||(21918052-21918085)
chr5 (221-254)||(25472620-25472653)
chr5 (221-254)||(25648122-25648155)
chr5 (221-254)||(27765257-27765290)
chr5 (221-254)||(29713413-29713446)
chr5 (221-254)||(32505688-32505721)
chr5 (221-254)||(42320317-42320350)
chr5 (221-253)||(2848213-2848245)
chr5 (222-254)||(8968750-8968782)
chr5 (221-253)||(42916389-42916421)
[»] chr3 (35 HSPs)
chr3 (219-254)||(9176623-9176658)
chr3 (219-254)||(34757527-34757562)
chr3 (220-254)||(4138999-4139033)
chr3 (220-254)||(47098731-47098765)
chr3 (220-254)||(52046422-52046456)
chr3 (221-254)||(882389-882422)
chr3 (221-254)||(2522926-2522959)
chr3 (221-254)||(6920000-6920033)
chr3 (221-254)||(7269955-7269988)
chr3 (221-254)||(7920320-7920353)
chr3 (221-254)||(11820004-11820037)
chr3 (221-254)||(19550506-19550539)
chr3 (221-254)||(19999867-19999900)
chr3 (221-254)||(22501968-22502001)
chr3 (221-254)||(28550356-28550389)
chr3 (221-254)||(30555264-30555297)
chr3 (221-254)||(31327538-31327571)
chr3 (221-254)||(31327755-31327788)
chr3 (221-254)||(32256591-32256624)
chr3 (221-254)||(37800648-37800681)
chr3 (221-254)||(39966111-39966144)
chr3 (221-254)||(40192156-40192189)
chr3 (221-254)||(40548303-40548336)
chr3 (221-254)||(40933868-40933901)
chr3 (221-254)||(44652019-44652052)
chr3 (221-254)||(45701344-45701377)
chr3 (221-254)||(46795966-46795999)
chr3 (221-254)||(48739781-48739814)
chr3 (221-254)||(50496851-50496884)
chr3 (221-254)||(52410278-52410311)
chr3 (221-254)||(52945895-52945928)
chr3 (221-254)||(53163594-53163627)
chr3 (221-254)||(53347327-53347360)
chr3 (221-253)||(3748640-3748672)
chr3 (221-253)||(31528996-31529028)
[»] scaffold0366 (1 HSPs)
scaffold0366 (220-254)||(897-931)
[»] scaffold0014 (1 HSPs)
scaffold0014 (220-254)||(12298-12332)
[»] chr8 (32 HSPs)
chr8 (220-254)||(29499577-29499611)
chr8 (220-254)||(34158694-34158728)
chr8 (221-254)||(12262-12295)
chr8 (221-254)||(94548-94581)
chr8 (221-254)||(1937310-1937343)
chr8 (221-254)||(8265268-8265301)
chr8 (221-254)||(10736911-10736944)
chr8 (221-254)||(11875886-11875919)
chr8 (221-254)||(11890893-11890926)
chr8 (221-254)||(16449125-16449158)
chr8 (221-254)||(17027917-17027950)
chr8 (221-254)||(17558353-17558386)
chr8 (221-254)||(17698522-17698555)
chr8 (221-254)||(23178928-23178961)
chr8 (221-254)||(26022247-26022280)
chr8 (221-254)||(28909465-28909498)
chr8 (221-254)||(29716860-29716893)
chr8 (221-254)||(30972854-30972887)
chr8 (221-254)||(32719644-32719677)
chr8 (221-254)||(34413062-34413095)
chr8 (221-254)||(35939487-35939520)
chr8 (221-254)||(38745316-38745349)
chr8 (221-254)||(39362265-39362298)
chr8 (221-254)||(41689882-41689915)
chr8 (221-254)||(43656036-43656069)
chr8 (221-254)||(44340382-44340415)
chr8 (222-254)||(2787118-2787150)
chr8 (221-253)||(6280480-6280512)
chr8 (210-254)||(22487864-22487908)
chr8 (222-254)||(23858198-23858230)
chr8 (221-253)||(29514626-29514658)
chr8 (221-253)||(33604210-33604242)
[»] chr7 (23 HSPs)
chr7 (220-254)||(24781029-24781063)
chr7 (220-254)||(27510294-27510328)
chr7 (221-254)||(2228975-2229008)
chr7 (221-254)||(2681096-2681129)
chr7 (221-254)||(9877304-9877337)
chr7 (221-254)||(10244926-10244959)
chr7 (221-254)||(12640626-12640659)
chr7 (221-254)||(15238889-15238922)
chr7 (221-254)||(19753005-19753038)
chr7 (221-254)||(23102595-23102628)
chr7 (221-254)||(25833555-25833588)
chr7 (221-254)||(29617405-29617438)
chr7 (221-254)||(35950128-35950161)
chr7 (221-254)||(36391941-36391974)
chr7 (221-254)||(37300136-37300169)
chr7 (221-254)||(42443689-42443722)
chr7 (221-254)||(44616602-44616635)
chr7 (221-254)||(47641045-47641078)
chr7 (221-254)||(47999780-47999813)
chr7 (221-253)||(5990183-5990215)
chr7 (222-254)||(36174391-36174423)
chr7 (221-253)||(36389704-36389736)
chr7 (222-254)||(41084040-41084072)
[»] scaffold0707 (1 HSPs)
scaffold0707 (221-254)||(57-90)
[»] scaffold0608 (1 HSPs)
scaffold0608 (221-254)||(8966-8999)
[»] scaffold0445 (1 HSPs)
scaffold0445 (221-254)||(4051-4084)
[»] scaffold0275 (1 HSPs)
scaffold0275 (221-254)||(8821-8854)
[»] scaffold0128 (1 HSPs)
scaffold0128 (221-254)||(17620-17653)
[»] scaffold0121 (1 HSPs)
scaffold0121 (221-254)||(46526-46559)
[»] scaffold0100 (1 HSPs)
scaffold0100 (221-254)||(45884-45917)
[»] scaffold0088 (1 HSPs)
scaffold0088 (221-254)||(10863-10896)
[»] scaffold0024 (1 HSPs)
scaffold0024 (221-254)||(59783-59816)
[»] scaffold0009 (1 HSPs)
scaffold0009 (221-254)||(266734-266767)
[»] scaffold0002 (1 HSPs)
scaffold0002 (221-254)||(8862-8895)
[»] chr2 (17 HSPs)
chr2 (221-254)||(1260185-1260218)
chr2 (220-253)||(2806539-2806572)
chr2 (221-254)||(3446730-3446763)
chr2 (221-254)||(4183176-4183209)
chr2 (221-254)||(8250338-8250371)
chr2 (221-254)||(18694785-18694818)
chr2 (221-254)||(19281608-19281641)
chr2 (221-254)||(19684073-19684106)
chr2 (221-254)||(22653681-22653714)
chr2 (221-254)||(25857332-25857365)
chr2 (221-254)||(27297175-27297208)
chr2 (221-254)||(33228970-33229003)
chr2 (221-254)||(34613979-34614012)
chr2 (221-254)||(38400310-38400343)
chr2 (221-254)||(44948596-44948629)
chr2 (221-253)||(17078457-17078489)
chr2 (222-254)||(41509517-41509549)


Alignment Details
Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 43619353 - 43619181
Alignment:
Q  16 cattaaggtttctttttattagtgaggtgctcnnnnnnncttaagattattgacacaaccctttttagaattacttaattatgatctacacttccaagtg 115  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||     
T  43619353 cattaaggtttctttttattagtgaggtgctctttttttcttaagattattgacacaacccttttgagaattatttaattatgatctacacttccaagta 43619254  T
Q  116 aagtttacatctaatctttcttaacttaatggccattattgtgtattttaggaggtaatggggaaataattag 188  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43619253 aagttaacatctaatctttcttaacttaatggcccttattgtgtattttaggaggtaatggggaaataattag 43619181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 22230515 - 22230471
Alignment:
Q  210 atattttccatcccgtgagctcagctcagttggtagggatattgc 254  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||    
T  22230515 atatcttcaatcccgtgagcttagctcagttggtagggatattgc 22230471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 40994175 - 40994140
Alignment:
Q  219 atcccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||||| |||||||||||||||||||||||    
T  40994175 atcccgtgagcttagctcagttggtagggatattgc 40994140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 22788745 - 22788711
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  22788745 tcccgtgagcttagctcagttggtagggatattgc 22788711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 24997505 - 24997471
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  24997505 tcccgtgagcttagctcagttggtagggatattgc 24997471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 43978007 - 43978041
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  43978007 tcccgtgagcttagctcagttggtagggatattgc 43978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 3847681 - 3847714
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  3847681 cccgtgagcttagctcagttggtagggatattgc 3847714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 6371114 - 6371147
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  6371114 cccgtgagcttagctcagttggtagggatattgc 6371147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 8433693 - 8433660
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  8433693 cccgtgagcttagctcagttggtagggatattgc 8433660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 8965094 - 8965127
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  8965094 cccgtgagcttagctcagttggtagggatattgc 8965127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 23705223 - 23705190
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  23705223 cccgtgagcttagctcagttggtagggatattgc 23705190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 24680156 - 24680123
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  24680156 cccgtgagcttagctcagttggtagggatattgc 24680123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 26868349 - 26868382
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  26868349 cccgtgagcttagctcagttggtagggatattgc 26868382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 26919538 - 26919505
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  26919538 cccgtgagcttagctcagttggtagggatattgc 26919505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 35219570 - 35219537
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  35219570 cccgtgagcttagctcagttggtagggatattgc 35219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 35465435 - 35465468
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  35465435 cccgtgagcttagctcagttggtagggatattgc 35465468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 37935861 - 37935894
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  37935861 cccgtgagcttagctcagttggtagggatattgc 37935894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 39023175 - 39023208
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  39023175 cccgtgagcttagctcagttggtagggatattgc 39023208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 40051622 - 40051655
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  40051622 cccgtgagcttagctcagttggtagggatattgc 40051655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 43147454 - 43147421
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  43147454 cccgtgagcttagctcagttggtagggatattgc 43147421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 43207669 - 43207702
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  43207669 cccgtgagcttagctcagttggtagggatattgc 43207702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 43596895 - 43596928
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  43596895 cccgtgagcttagctcagttggtagggatattgc 43596928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 44602485 - 44602518
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  44602485 cccgtgagcttagctcagttggtagggatattgc 44602518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 45849047 - 45849080
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  45849047 cccgtgagcttagctcagttggtagggatattgc 45849080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 46105535 - 46105568
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  46105535 cccgtgagcttagctcagttggtagggatattgc 46105568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 46775100 - 46775067
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  46775100 cccgtgagcttagctcagttggtagggatattgc 46775067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 48569246 - 48569213
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  48569246 cccgtgagcttagctcagttggtagggatattgc 48569213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 48798279 - 48798312
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  48798279 cccgtgagcttagctcagttggtagggatattgc 48798312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 49901482 - 49901515
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  49901482 cccgtgagcttagctcagttggtagggatattgc 49901515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 51512079 - 51512046
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  51512079 cccgtgagctgagctcagttggtagggatattgc 51512046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 55251421 - 55251388
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  55251421 cccgtgagcttagctcagttggtagggatattgc 55251388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 30217600 - 30217632
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  30217600 ccgtgagcttagctcagttggtagggatattgc 30217632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 34353780 - 34353812
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  34353780 ccgtgagcttagctcagttggtagggatattgc 34353812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 39697935 - 39697899
Alignment:
Q  218 catcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  39697935 catcccgtgagcttagctcagttgatagggatattgc 39697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 45126132 - 45126164
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  45126132 cccgtgagcttagctcagttggtagggatattg 45126164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 9866258 - 9866221
Alignment:
Q  217 ccatcccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||||||| |||||||||||||||||||||||    
T  9866258 ccatcccgtgagcttagctcagttggtagggatattgc 9866221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 24874970 - 24875004
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  24874970 tcccgtgagcttagctcagttggtagggatattgc 24875004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 1151759 - 1151792
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  1151759 cccgtgagcttagctcagttggtagggatattgc 1151792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 1570262 - 1570229
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  1570262 cccgtgagcttagctcagttggtagggatattgc 1570229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 3269619 - 3269652
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  3269619 cccgtgagcttagctcagttggtagggatattgc 3269652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 4482668 - 4482635
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  4482668 cccgtgagcttagctcagttggtagggatattgc 4482635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 6438134 - 6438101
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  6438134 cccgtgagcttagctcagttggtagggatattgc 6438101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 6702576 - 6702609
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  6702576 cccgtgagcttagctcagttggtagggatattgc 6702609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 6893307 - 6893274
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  6893307 cccgtgagcttagctcagttggtagggatattgc 6893274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 7166297 - 7166264
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  7166297 cccgtgagcttagctcagttggtagggatattgc 7166264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 8865854 - 8865887
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  8865854 cccgtgagcttagctcagttggtagggatattgc 8865887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 10664864 - 10664831
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  10664864 cccgtgagcttagctcagttggtagggatattgc 10664831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 15819671 - 15819638
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  15819671 cccgtgagcttagctcagttggtagggatattgc 15819638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 16343028 - 16343061
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  16343028 cccgtgagcttagctcagttggtagggatattgc 16343061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 21265656 - 21265689
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  21265656 cccgtgagcttagctcagttggtagggatattgc 21265689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 22563386 - 22563419
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  22563386 cccgtgagcttagctcagttggtagggatattgc 22563419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 25999850 - 25999883
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  25999850 cccgtgagcttagctcagttggtagggatattgc 25999883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 26584816 - 26584783
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  26584816 cccgtgagcttagctcagttggtagggatattgc 26584783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 32594251 - 32594284
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  32594251 cccgtgagcttagctcagttggtagggatattgc 32594284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 33207205 - 33207238
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  33207205 cccgtgagcttagctcagttggtagggatattgc 33207238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 33254728 - 33254761
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  33254728 cccgtgagcttagctcagttggtagggatattgc 33254761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 33274900 - 33274933
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  33274900 cccgtgagcttagctcagttggtagggatattgc 33274933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 35605693 - 35605660
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  35605693 cccgtgagcttagctcagttggtagggatattgc 35605660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 40519614 - 40519581
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  40519614 cccgtgagcttagctcagttggtagggatattgc 40519581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 42054333 - 42054366
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  42054333 cccgtgagcttagctcagttggtagggatattgc 42054366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 42490480 - 42490447
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  42490480 cccgtgagcttagctcagttggtagggatattgc 42490447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 46965740 - 46965773
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  46965740 cccgtgagcttagctcagttggtagggatattgc 46965773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 48638532 - 48638565
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  48638532 cccgtgagcttagctcagttggtagggatattgc 48638565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 50899580 - 50899547
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  50899580 cccgtgagcttagctcagttggtagggatattgc 50899547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 2277755 - 2277787
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  2277755 ccgtgagcttagctcagttggtagggatattgc 2277787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 11215002 - 11215034
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  11215002 ccgtgagcttagctcagttggtagggatattgc 11215034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 34058215 - 34058247
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  34058215 ccgtgagcttagctcagttggtagggatattgc 34058247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 34580856 - 34580824
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||| ||||||||||||||||||||||||    
T  34580856 cccgtgagttcagctcagttggtagggatattg 34580824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 51050190 - 51050222
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  51050190 cccgtgagcttagctcagttggtagggatattg 51050222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 8439673 - 8439708
Alignment:
Q  219 atcccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||||| |||||||||||||||||||||||    
T  8439673 atcccgtgagcttagctcagttggtagggatattgc 8439708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 607187 - 607220
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  607187 cccgtgagcttagctcagttggtagggatattgc 607220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 2251838 - 2251871
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  2251838 cccgtgagcttagctcagttggtagggatattgc 2251871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 3794243 - 3794210
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  3794243 cccgtgagcttagctcagttggtagggatattgc 3794210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 4408358 - 4408391
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  4408358 cccgtgagcttagctcagttggtagggatattgc 4408391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 7207844 - 7207877
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  7207844 cccgtgagcttagctcagttggtagggatattgc 7207877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 7545329 - 7545362
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  7545329 cccgtgagcttagctcagttggtagggatattgc 7545362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 7865425 - 7865392
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  7865425 cccgtgagcttagctcagttggtagggatattgc 7865392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 9246452 - 9246419
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  9246452 cccgtgagcttagctcagttggtagggatattgc 9246419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 9372271 - 9372238
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  9372271 cccgtgagcttagctcagttggtagggatattgc 9372238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 9435626 - 9435659
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  9435626 cccgtgagcttagctcagttggtagggatattgc 9435659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 10934599 - 10934632
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  10934599 cccgtgagcttagctcagttggtagggatattgc 10934632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 15091448 - 15091481
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  15091448 cccgtgagcttagctcagttggtagggatattgc 15091481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17441909 - 17441876
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  17441909 cccgtgagcttagctcagttggtagggatattgc 17441876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 19953898 - 19953865
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  19953898 cccgtgagcttagctcagttggtagggatattgc 19953865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 30885640 - 30885607
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  30885640 cccgtgagcttagctcagttggtagggatattgc 30885607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 33573817 - 33573850
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  33573817 cccgtgagcttagctcagttggtagggatattgc 33573850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 3196618 - 3196650
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatatt 252  Q
    ||||||||||| |||||||||||||||||||||    
T  3196618 tcccgtgagcttagctcagttggtagggatatt 3196650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 3294765 - 3294797
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  3294765 ccgtgagcttagctcagttggtagggatattgc 3294797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 4869771 - 4869739
Alignment:
Q  218 catcccgtgagctcagctcagttggtagggata 250  Q
    ||||||||||||| |||||||||||||||||||    
T  4869771 catcccgtgagcttagctcagttggtagggata 4869739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 7177295 - 7177327
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  7177295 cccgtgagcttagctcagttggtagggatattg 7177327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 15964016 - 15963980
Alignment:
Q  218 catcccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||| |||||| |||||||||||||||||||||||    
T  15964016 catcccctgagcttagctcagttggtagggatattgc 15963980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000006; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 23292489 - 23292454
Alignment:
Q  219 atcccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||||| |||||||||||||||||||||||    
T  23292489 atcccgtgagcttagctcagttggtagggatattgc 23292454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 41179883 - 41179840
Alignment:
Q  212 attttccatccc-gtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||||| ||||||| |||||||||||||||||||||||    
T  41179883 attttccatccccgtgagcttagctcagttggtagggatattgc 41179840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 35515511 - 35515545
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  35515511 tcccgtgagcttagctcagttggtagggatattgc 35515545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 1743127 - 1743160
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  1743127 cccgtgagcttagctcagttggtagggatattgc 1743160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 4417755 - 4417722
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  4417755 cccgtgagcttagctcagttggtagggatattgc 4417722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 4745946 - 4745913
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  4745946 cccgtgagcttagctcagttggtagggatattgc 4745913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 6518846 - 6518813
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  6518846 cccgtgagcttagctcagttggtagggatattgc 6518813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 9835033 - 9835066
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  9835033 cccgtgagcttagctcagttggtagggatattgc 9835066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 11897248 - 11897281
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  11897248 cccgtgagcttagctcagttggtagggatattgc 11897281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 12463756 - 12463789
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  12463756 cccgtgagcttagctcagttggtagggatattgc 12463789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 12891557 - 12891590
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  12891557 cccgtgagcttagctcagttggtagggatattgc 12891590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 16603398 - 16603431
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  16603398 cccgtgagcttagctcagttggtagggatattgc 16603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17545242 - 17545209
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  17545242 cccgtgagcttagctcagttggtagggatattgc 17545209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 21918052 - 21918085
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  21918052 cccgtgagcttagctcagttggtagggatattgc 21918085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 25472653 - 25472620
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  25472653 cccgtgagcttagctcagttggtagggatattgc 25472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 25648155 - 25648122
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  25648155 cccgtgagcttagctcagttggtagggatattgc 25648122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 27765257 - 27765290
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  27765257 cccgtgagcttagctcagttggtagggatattgc 27765290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 29713446 - 29713413
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  29713446 cccgtgagcttagctcagttggtagggatattgc 29713413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 32505688 - 32505721
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  32505688 cccgtgagcttagctcagttggtagggatattgc 32505721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 42320317 - 42320350
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  42320317 cccgtgagcttagctcagttggtagggatattgc 42320350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 2848213 - 2848245
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  2848213 cccgtgagcttagctcagttggtagggatattg 2848245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 8968750 - 8968782
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  8968750 ccgtgagcttagctcagttggtagggatattgc 8968782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 42916389 - 42916421
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  42916389 cccgtgagcttagctcagttggtagggatattg 42916421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000006; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 9176658 - 9176623
Alignment:
Q  219 atcccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||||| |||||||||||||||||||||||    
T  9176658 atcccgtgagcttagctcagttggtagggatattgc 9176623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 34757527 - 34757562
Alignment:
Q  219 atcccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||||| |||||||||||||||||||||||    
T  34757527 atcccgtgagcttagctcagttggtagggatattgc 34757562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 4138999 - 4139033
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  4138999 tcccgtgagcttagctcagttggtagggatattgc 4139033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 47098731 - 47098765
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  47098731 tcccgtgagcttagctcagttggtagggatattgc 47098765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 52046456 - 52046422
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  52046456 tcccgtgagcttagctcagttggtagggatattgc 52046422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 882389 - 882422
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  882389 cccgtgagcttagctcagttggtagggatattgc 882422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 2522926 - 2522959
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  2522926 cccgtgagcttagctcagttggtagggatattgc 2522959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 6920033 - 6920000
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  6920033 cccgtgagcttagctcagttggtagggatattgc 6920000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 7269955 - 7269988
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  7269955 cccgtgagcttagctcagttggtagggatattgc 7269988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 7920320 - 7920353
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  7920320 cccgtgagcttagctcagttggtagggatattgc 7920353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 11820004 - 11820037
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  11820004 cccgtgagcttagctcagttggtagggatattgc 11820037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 19550506 - 19550539
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  19550506 cccgtgagcttagctcagttggtagggatattgc 19550539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 19999867 - 19999900
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  19999867 cccgtgagcttagctcagttggtagggatattgc 19999900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 22502001 - 22501968
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  22502001 cccgtgagcttagctcagttggtagggatattgc 22501968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 28550389 - 28550356
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  28550389 cccgtgagcttagctcagttggtagggatattgc 28550356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 30555297 - 30555264
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  30555297 cccgtgagcttagctcagttggtagggatattgc 30555264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 31327571 - 31327538
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  31327571 cccgtgagcttagctcagttggtagggatattgc 31327538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 31327788 - 31327755
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  31327788 cccgtgagcttagctcagttggtagggatattgc 31327755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 32256624 - 32256591
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  32256624 cccgtgagcttagctcagttggtagggatattgc 32256591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 37800681 - 37800648
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  37800681 cccgtgagcttagctcagttggtagggatattgc 37800648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 39966144 - 39966111
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  39966144 cccgtgagcttagctcagttggtagggatattgc 39966111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 40192156 - 40192189
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  40192156 cccgtgagcttagctcagttggtagggatattgc 40192189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 40548303 - 40548336
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  40548303 cccgtgagcttagctcagttggtagggatattgc 40548336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 40933901 - 40933868
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  40933901 cccgtgagcttagctcagttggtagggatattgc 40933868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 44652052 - 44652019
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  44652052 cccgtgagcttagctcagttggtagggatattgc 44652019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 45701344 - 45701377
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  45701344 cccgtgagcttagctcagttggtagggatattgc 45701377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 46795999 - 46795966
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  46795999 cccgtgagcttagctcagttggtagggatattgc 46795966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 48739814 - 48739781
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  48739814 cccgtgagcttagctcagttggtagggatattgc 48739781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 50496884 - 50496851
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  50496884 cccgtgagcttagctcagttggtagggatattgc 50496851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 52410311 - 52410278
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  52410311 cccgtgagcttagctcagttggtagggatattgc 52410278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 52945895 - 52945928
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  52945895 cccgtgagcttagctcagttggtagggatattgc 52945928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 53163594 - 53163627
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  53163594 cccgtgagcttagctcagttggtagggatattgc 53163627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 53347360 - 53347327
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  53347360 cccgtgagcttagctcagttggtagggatattgc 53347327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 3748672 - 3748640
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  3748672 cccgtgagcttagctcagttggtagggatattg 3748640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 31529028 - 31528996
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  31529028 cccgtgagcttagctcagttggtagggatattg 31528996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 931 - 897
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  931 tcccgtgagcttagctcagttggtagggatattgc 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 12332 - 12298
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  12332 tcccgtgagcttagctcagttggtagggatattgc 12298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 29499577 - 29499611
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||| ||||||||||||||||||||||||||    
T  29499577 tcccgtgaactcagctcagttggtagggatattgc 29499611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 34158728 - 34158694
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  34158728 tcccgtgagcttagctcagttggtagggatattgc 34158694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 12295 - 12262
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  12295 cccgtgagcttagctcagttggtagggatattgc 12262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 94581 - 94548
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  94581 cccgtgagcttagctcagttggtagggatattgc 94548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 1937310 - 1937343
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  1937310 cccgtgagcttagctcagttggtagggatattgc 1937343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 8265268 - 8265301
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  8265268 cccgtgagcttagctcagttggtagggatattgc 8265301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 10736944 - 10736911
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  10736944 cccgtgagcttagctcagttggtagggatattgc 10736911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 11875886 - 11875919
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  11875886 cccgtgagcttagctcagttggtagggatattgc 11875919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 11890893 - 11890926
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  11890893 cccgtgagcttagctcagttggtagggatattgc 11890926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 16449125 - 16449158
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  16449125 cccgtgagcttagctcagttggtagggatattgc 16449158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17027950 - 17027917
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  17027950 cccgtgagcttagctcagttggtagggatattgc 17027917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17558386 - 17558353
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  17558386 cccgtgagcttagctcagttggtagggatattgc 17558353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 17698522 - 17698555
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  17698522 cccgtgagcttagctcagttggtagggatattgc 17698555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 23178961 - 23178928
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  23178961 cccgtgagcttagctcagttggtagggatattgc 23178928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 26022247 - 26022280
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  26022247 cccgtgagcttagctcagttggtagggatattgc 26022280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 28909465 - 28909498
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  28909465 cccgtgagcttagctcagttggtagggatattgc 28909498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 29716860 - 29716893
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  29716860 cccgtgagcttagctcagttggtagggatattgc 29716893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 30972887 - 30972854
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  30972887 cccgtgagcttagctcagttggtagggatattgc 30972854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 32719677 - 32719644
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  32719677 cccgtgagcttagctcagttggtagggatattgc 32719644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 34413062 - 34413095
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  34413062 cccgtgagcttagctcagttggtagggatattgc 34413095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 35939487 - 35939520
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  35939487 cccgtgagcttagctcagttggtagggatattgc 35939520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 38745349 - 38745316
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  38745349 cccgtgagcttagctcagttggtagggatattgc 38745316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 39362265 - 39362298
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  39362265 cccgtgagcttagctcagttggtagggatattgc 39362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 41689882 - 41689915
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  41689882 cccgtgagcttagctcagttggtagggatattgc 41689915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 43656036 - 43656069
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  43656036 cccgtgagcttagctcagttggtagggatattgc 43656069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 44340415 - 44340382
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  44340415 cccgtgagcttagctcagttggtagggatattgc 44340382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 2787150 - 2787118
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  2787150 ccgtgagcttagctcagttggtagggatattgc 2787118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 6280480 - 6280512
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  6280480 cccgtgagcttagctcagttggtagggatattg 6280512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 22487864 - 22487908
Alignment:
Q  210 atattttccatcccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||| || ||||||| | |||||||||||||||||||||||    
T  22487864 atattttcaattccgtgagtttagctcagttggtagggatattgc 22487908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 23858198 - 23858230
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  23858198 ccgtgagcttagctcagttggtagggatattgc 23858230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 29514626 - 29514658
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  29514626 cccgtgagcttagctcagttggtagggatattg 29514658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 33604242 - 33604210
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  33604242 cccgtgagcttagctcagttggtagggatattg 33604210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 24781029 - 24781063
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  24781029 tcccgtgagcttagctcagttggtagggatattgc 24781063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 27510328 - 27510294
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  27510328 tcccgtgagcttagctcagttggtagggatattgc 27510294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 2228975 - 2229008
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  2228975 cccgtgagcttagctcagttggtagggatattgc 2229008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 2681096 - 2681129
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  2681096 cccgtgagcttagctcagttggtagggatattgc 2681129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 9877337 - 9877304
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  9877337 cccgtgagcttagctcagttggtagggatattgc 9877304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 10244959 - 10244926
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  10244959 cccgtgagcttagctcagttggtagggatattgc 10244926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 12640659 - 12640626
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  12640659 cccgtgagcttagctcagttggtagggatattgc 12640626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 15238889 - 15238922
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  15238889 cccgtgagcttagctcagttggtagggatattgc 15238922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 19753038 - 19753005
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  19753038 cccgtgagcttagctcagttggtagggatattgc 19753005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 23102628 - 23102595
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  23102628 cccgtgagcttagctcagttggtagggatattgc 23102595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 25833555 - 25833588
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  25833555 cccgtgagcttagctcagttggtagggatattgc 25833588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 29617405 - 29617438
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  29617405 cccgtgagcttagctcagttggtagggatattgc 29617438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 35950128 - 35950161
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  35950128 cccgtgagcttagctcagttggtagggatattgc 35950161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 36391974 - 36391941
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  36391974 cccgtgagcttagctcagttggtagggatattgc 36391941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 37300169 - 37300136
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  37300169 cccgtgagcttagctcagttggtagggatattgc 37300136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 42443689 - 42443722
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  42443689 cccgtgagcttagctcagttggtagggatattgc 42443722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 44616602 - 44616635
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  44616602 cccgtgagcttagctcagttggtagggatattgc 44616635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 47641045 - 47641078
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  47641045 cccgtgagcttagctcagttggtagggatattgc 47641078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 47999780 - 47999813
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  47999780 cccgtgagcttagctcagttggtagggatattgc 47999813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 5990215 - 5990183
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  5990215 cccgtgagcttagctcagttggtagggatattg 5990183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 36174391 - 36174423
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  36174391 ccgtgagcttagctcagttggtagggatattgc 36174423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 36389736 - 36389704
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  36389736 cccgtgagcttagctcagttggtagggatattg 36389704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 41084040 - 41084072
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  41084040 ccgtgagcttagctcagttggtagggatattgc 41084072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 90 - 57
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  90 cccgtgagcttagctcagttggtagggatattgc 57  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 8966 - 8999
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  8966 cccgtgagcttagctcagttggtagggatattgc 8999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 4084 - 4051
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  4084 cccgtgagcttagctcagttggtagggatattgc 4051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 8821 - 8854
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  8821 cccgtgagcttagctcagttggtagggatattgc 8854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 17620 - 17653
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  17620 cccgtgagcttagctcagttggtagggatattgc 17653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 46526 - 46559
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  46526 cccgtgagcttagctcagttggtagggatattgc 46559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 45884 - 45917
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  45884 cccgtgagcttagctcagttggtagggatattgc 45917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 10896 - 10863
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  10896 cccgtgagcttagctcagttggtagggatattgc 10863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 59783 - 59816
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  59783 cccgtgagcttagctcagttggtagggatattgc 59816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 266767 - 266734
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  266767 cccgtgagcttagctcagttggtagggatattgc 266734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 8895 - 8862
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  8895 cccgtgagcttagctcagttggtagggatattgc 8862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.00000009; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 1260185 - 1260218
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  1260185 cccgtgagcttagctcagttggtagggatattgc 1260218  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 2806572 - 2806539
Alignment:
Q  220 tcccgtgagctcagctcagttggtagggatattg 253  Q
    ||||||||||| ||||||||||||||||||||||    
T  2806572 tcccgtgagcttagctcagttggtagggatattg 2806539  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 3446730 - 3446763
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  3446730 cccgtgagcttagctcagttggtagggatattgc 3446763  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 4183176 - 4183209
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  4183176 cccgtgagcttagctcagttggtagggatattgc 4183209  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 8250371 - 8250338
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  8250371 cccgtgagcttagctcagttggtagggatattgc 8250338  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 18694785 - 18694818
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  18694785 cccgtgagcttagctcagttggtagggatattgc 18694818  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 19281608 - 19281641
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  19281608 cccgtgagcttagctcagttggtagggatattgc 19281641  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 19684073 - 19684106
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  19684073 cccgtgagcttagctcagttggtagggatattgc 19684106  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 22653714 - 22653681
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  22653714 cccgtgagcttagctcagttggtagggatattgc 22653681  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 25857365 - 25857332
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  25857365 cccgtgagcttagctcagttggtagggatattgc 25857332  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 27297175 - 27297208
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  27297175 cccgtgagcttagctcagttggtagggatattgc 27297208  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 33229003 - 33228970
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  33229003 cccgtgagcttagctcagttggtagggatattgc 33228970  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 34613979 - 34614012
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  34613979 cccgtgagcttagctcagttggtagggatattgc 34614012  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 38400310 - 38400343
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  38400310 cccgtgagcttagctcagttggtagggatattgc 38400343  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 44948596 - 44948629
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattgc 254  Q
    |||||||||| |||||||||||||||||||||||    
T  44948596 cccgtgagcttagctcagttggtagggatattgc 44948629  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 17078457 - 17078489
Alignment:
Q  221 cccgtgagctcagctcagttggtagggatattg 253  Q
    |||||||||| ||||||||||||||||||||||    
T  17078457 cccgtgagcttagctcagttggtagggatattg 17078489  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 41509517 - 41509549
Alignment:
Q  222 ccgtgagctcagctcagttggtagggatattgc 254  Q
    ||||||||| |||||||||||||||||||||||    
T  41509517 ccgtgagcttagctcagttggtagggatattgc 41509549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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