View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16712_high_14 (Length: 238)
Name: NF16712_high_14
Description: NF16712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16712_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 24056470 - 24056259
Alignment:
| Q |
13 |
aatattagttaaactgaatatatgaatctcttaattttgttttaagctgaccaaagaaatcattttttatgattctattatttatatcaatatgcttcaa |
112 |
Q |
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| T |
24056470 |
aatattagttaaactgaatatatgaatctcttaattttgttttaagctgaccaaagaaatcattttttatgattctattatttatatcaataagcttcaa |
24056371 |
T |
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| Q |
113 |
aatgaagctaagagactcaagagtcacacctatgcttcaagatttggaagcaaaaagaaaagtcagaggtaagagcaaccctgaatatagatgaatttta |
212 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
24056370 |
aatgaagctaagagactcaagagtcacacccatgcttcaagatttggaagcaaaaagaaaagtcagaggaaagagcaaccctgaatatagatgaatttta |
24056271 |
T |
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| Q |
213 |
tgttgctgaaaa |
224 |
Q |
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|||||||||||| |
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| T |
24056270 |
tgttgctgaaaa |
24056259 |
T |
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