View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16714_high_22 (Length: 315)
Name: NF16714_high_22
Description: NF16714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16714_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 36656005 - 36656300
Alignment:
| Q |
1 |
caagggaaatgaaacaaacccgataagtaaggtggttccggcagtggctgcacaagcaggaatactaacccctccaggacgaccaacgatatctttgatt |
100 |
Q |
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| T |
36656005 |
caagggaaatgaaacaaacccgataagtaaggtggttccggcagtggctgcacaagcaggaatactaacccctccaggacgaccaacgatatctttgatt |
36656104 |
T |
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| Q |
101 |
tcagaatgttgaagatttacattgcttttcatctattgattaacataaacaaagcataattaaatgaaagcaagtaatgcaaaaaacattaaaaactgaa |
200 |
Q |
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||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36656105 |
tcagaatgtcgaagatttacattgcttttcatctatggattaacataaacaaagcataattaaatgaaagcaagtaatgcaaaaaacattaaaaactgaa |
36656204 |
T |
|
| Q |
201 |
tcaaagcagatagacatagatatatacagcttgttcaatggattggagcctttcattaactcttgtttcatgtacatgccgcaacgaataccctac |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
36656205 |
tcaaagcagatagacatagatatatacagcttgttcaatggattggagcctttcattaactcttgtttcatgtacatgccgcaaagaataccctac |
36656300 |
T |
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