View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16719_high_19 (Length: 267)
Name: NF16719_high_19
Description: NF16719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16719_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 54479578 - 54479815
Alignment:
| Q |
13 |
cagaccctttgatactggaccctttgattatgatgcttgatcactgactcatttcatgcatatcatctattatattttatattagtcttaaggtttgttg |
112 |
Q |
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| T |
54479578 |
cagaccctttgatactggaccctttgattatgatgcttgatcactgactcatttcatgcatatcatctattatattttatattagtcttaaggtttgttg |
54479677 |
T |
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| Q |
113 |
ccatttattttcttatttcgttcatacttcgtcttatacatgcaaatgtataatctcctctatattcaccaaaaacaatacgtacttgtttaatctcctc |
212 |
Q |
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| T |
54479678 |
ccatttattttcttatttcgttcatactttgtcttatacatgcaaatgtataatctcctctatattcaccaaaaacaatacgtacttgtttaatctcctc |
54479777 |
T |
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| Q |
213 |
tatacaagcaatgattctaatgaaagcatgtttttgtt |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
54479778 |
tatacaagcaatgattctaatgaaagcatgtttttgtt |
54479815 |
T |
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