View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16721_low_4 (Length: 263)
Name: NF16721_low_4
Description: NF16721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16721_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 48080875 - 48080643
Alignment:
| Q |
14 |
cataggcataatcatccccatggtgatgcatgtgacggtggtggtattgtgaaggagcatggccatgatcattcgcatgcactcattgctgctaatgaag |
113 |
Q |
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| T |
48080875 |
cataggcataatcatccccatggtgatgcatgtgacggtggtggtattgtgaaggagcatggccatgatcattcacatgcactcattgctgctaatgaag |
48080776 |
T |
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| Q |
114 |
aaactgatgtacgacacgtcgttgtttctcaggtatatatttacaaaaaatatttaaaaatttagtttttattattctgttttgttaagattatactcaa |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48080775 |
aaactgatgtacgacacgtcgttgtttctcaggtatatatttacaaaaaatatttaaaaatttagtttttattattctgttttgttaagattatactcaa |
48080676 |
T |
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| Q |
214 |
ttataaattttcctctgttttacaattagaaaa |
246 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
48080675 |
ttataaattttcctctgttttacaattagaaaa |
48080643 |
T |
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