View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16722_low_15 (Length: 329)
Name: NF16722_low_15
Description: NF16722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16722_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 6 - 313
Target Start/End: Original strand, 33818276 - 33818583
Alignment:
| Q |
6 |
ttaagttattaaaggacatagaaatctttattttccttttttaagatttagaactgttgcaaattttgaccaacttcacataaaatacttggcaactttc |
105 |
Q |
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| T |
33818276 |
ttaagttattaaaggacatacaaatctttattttccttttttaagatttagaactgttgcaaattttgaccaacttcacataaaatacttggcaactttc |
33818375 |
T |
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| Q |
106 |
ttaattaagagatgataagataaggcttgccaatggtgtatagaacattatgcatatagagatgaaaatgtaatataggactatctggcttttagcttta |
205 |
Q |
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| T |
33818376 |
ttaattaagagatgataagataaggcttgccaatggtgtatagaacattatgcatatagagatgaaaatgtaatataggactatctggcttttagcttta |
33818475 |
T |
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| Q |
206 |
tattcttttctttcaatcaacttcaggaatcaaaaggcaaaacattgattcaacaaacgaaaataagatagaacattgatctcatagtagactttataga |
305 |
Q |
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| T |
33818476 |
tattcttttctttcaatcaacttcaggaatcaaaaggcaaaacattgattcaacaaacaaaaataagatagaacattgatctcatagtagactttataga |
33818575 |
T |
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| Q |
306 |
ggggaagg |
313 |
Q |
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|||||||| |
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| T |
33818576 |
ggggaagg |
33818583 |
T |
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