View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16724_low_15 (Length: 245)

Name: NF16724_low_15
Description: NF16724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16724_low_15
NF16724_low_15
[»] chr5 (42 HSPs)
chr5 (1-139)||(35776485-35776623)
chr5 (126-185)||(30489135-30489194)
chr5 (126-185)||(15966685-15966744)
chr5 (104-185)||(36329122-36329203)
chr5 (125-185)||(9004985-9005045)
chr5 (125-185)||(36137053-36137113)
chr5 (126-185)||(7336894-7336953)
chr5 (126-185)||(18942025-18942084)
chr5 (126-185)||(34102114-34102173)
chr5 (126-185)||(34186397-34186456)
chr5 (126-185)||(37554386-37554445)
chr5 (104-185)||(14571025-14571106)
chr5 (104-185)||(39916302-39916383)
chr5 (125-185)||(14274172-14274232)
chr5 (133-185)||(35067961-35068013)
chr5 (179-231)||(35776246-35776298)
chr5 (104-188)||(37637286-37637370)
chr5 (126-181)||(1723289-1723344)
chr5 (126-185)||(15965995-15966054)
chr5 (126-185)||(21152630-21152689)
chr5 (126-185)||(21159765-21159824)
chr5 (126-185)||(21163572-21163631)
chr5 (126-185)||(22473977-22474036)
chr5 (126-185)||(37685009-37685068)
chr5 (126-185)||(38860842-38860901)
chr5 (126-185)||(40914155-40914214)
chr5 (126-185)||(43340454-43340513)
chr5 (126-185)||(43585537-43585596)
chr5 (126-185)||(20503272-20503327)
chr5 (99-185)||(32067954-32068040)
chr5 (119-185)||(36964272-36964338)
chr5 (104-181)||(14416423-14416500)
chr5 (136-185)||(26168237-26168286)
chr5 (104-185)||(27990374-27990455)
chr5 (104-185)||(37685012-37685093)
chr5 (104-185)||(11784302-11784384)
chr5 (125-185)||(12165322-12165382)
chr5 (125-185)||(14571050-14571110)
chr5 (133-185)||(24433581-24433633)
chr5 (133-185)||(31947492-31947544)
chr5 (125-181)||(34102121-34102177)
chr5 (133-185)||(35907874-35907926)
[»] chr8 (33 HSPs)
chr8 (100-185)||(20524179-20524264)
chr8 (119-185)||(13832040-13832106)
chr8 (93-185)||(42149168-42149260)
chr8 (98-185)||(44282307-44282394)
chr8 (99-185)||(5040080-5040166)
chr8 (125-185)||(34194598-34194658)
chr8 (125-185)||(34326287-34326347)
chr8 (105-177)||(35874483-35874555)
chr8 (133-185)||(44838820-44838872)
chr8 (126-185)||(27781923-27781982)
chr8 (126-185)||(35969701-35969760)
chr8 (126-185)||(37922851-37922910)
chr8 (126-185)||(38883988-38884047)
chr8 (126-185)||(40802242-40802301)
chr8 (126-185)||(41177997-41178056)
chr8 (126-185)||(42631821-42631880)
chr8 (126-185)||(43483974-43484033)
chr8 (97-179)||(29730697-29730779)
chr8 (104-185)||(3611811-3611892)
chr8 (126-185)||(8568859-8568918)
chr8 (126-185)||(26492351-26492410)
chr8 (126-185)||(32032991-32033050)
chr8 (126-185)||(34188360-34188419)
chr8 (126-185)||(34194602-34194661)
chr8 (126-185)||(35063502-35063561)
chr8 (126-185)||(39655459-39655518)
chr8 (126-185)||(42795137-42795196)
chr8 (126-184)||(24726078-24726136)
chr8 (130-179)||(26191817-26191866)
chr8 (125-185)||(7256925-7256985)
chr8 (125-185)||(19293058-19293118)
chr8 (125-185)||(29916173-29916233)
chr8 (125-181)||(40716784-40716840)
[»] chr2 (38 HSPs)
chr2 (125-181)||(29573852-29573908)
chr2 (94-185)||(921858-921949)
chr2 (125-185)||(42579057-42579117)
chr2 (126-185)||(5144310-5144369)
chr2 (126-185)||(5204931-5204990)
chr2 (126-185)||(34466137-34466196)
chr2 (125-185)||(9071243-9071303)
chr2 (126-185)||(10099591-10099650)
chr2 (126-185)||(26567678-26567737)
chr2 (126-185)||(30905163-30905222)
chr2 (126-185)||(32070503-32070562)
chr2 (82-181)||(32473466-32473565)
chr2 (126-184)||(9158017-9158075)
chr2 (99-185)||(31596809-31596895)
chr2 (83-161)||(42955099-42955177)
chr2 (104-185)||(10041559-10041640)
chr2 (125-185)||(8554709-8554769)
chr2 (125-185)||(32346116-32346175)
chr2 (133-185)||(37486045-37486097)
chr2 (138-185)||(324838-324885)
chr2 (126-181)||(2795356-2795411)
chr2 (126-185)||(4898207-4898266)
chr2 (126-185)||(4945601-4945660)
chr2 (126-185)||(9709700-9709759)
chr2 (126-185)||(17843993-17844052)
chr2 (126-185)||(24971247-24971306)
chr2 (126-185)||(33618236-33618295)
chr2 (126-185)||(40739531-40739590)
chr2 (126-185)||(43514798-43514857)
chr2 (83-181)||(42579065-42579163)
chr2 (104-185)||(8382840-8382921)
chr2 (104-185)||(40739534-40739615)
chr2 (125-185)||(2795348-2795408)
chr2 (125-189)||(11093568-11093632)
chr2 (125-185)||(24971243-24971303)
chr2 (125-185)||(29771756-29771816)
chr2 (133-185)||(34240866-34240917)
chr2 (133-185)||(45123841-45123893)
[»] chr4 (64 HSPs)
chr4 (126-185)||(17028275-17028334)
chr4 (125-185)||(13743896-13743956)
chr4 (125-185)||(40952577-40952637)
chr4 (126-185)||(11583746-11583805)
chr4 (126-185)||(26206636-26206695)
chr4 (126-185)||(30162650-30162709)
chr4 (126-185)||(48042630-48042689)
chr4 (119-185)||(44551230-44551296)
chr4 (128-185)||(49745505-49745562)
chr4 (81-148)||(2941766-2941834)
chr4 (129-181)||(5048481-5048533)
chr4 (129-185)||(16450201-16450257)
chr4 (105-177)||(24448683-24448755)
chr4 (125-185)||(53403033-53403093)
chr4 (126-185)||(4711448-4711507)
chr4 (126-185)||(33084756-33084815)
chr4 (126-185)||(41788960-41789019)
chr4 (125-188)||(43635874-43635937)
chr4 (126-185)||(44639785-44639844)
chr4 (126-185)||(48079558-48079617)
chr4 (99-185)||(34458997-34459083)
chr4 (127-185)||(53508540-53508598)
chr4 (127-185)||(53551637-53551695)
chr4 (104-185)||(33659814-33659895)
chr4 (104-185)||(42013163-42013244)
chr4 (93-181)||(11511714-11511802)
chr4 (133-185)||(19754257-19754309)
chr4 (133-185)||(19785497-19785549)
chr4 (125-185)||(24331467-24331527)
chr4 (125-185)||(25856048-25856108)
chr4 (133-185)||(43635878-43635930)
chr4 (104-176)||(46779345-46779417)
chr4 (126-185)||(17659504-17659563)
chr4 (126-185)||(23329412-23329471)
chr4 (126-185)||(23710874-23710933)
chr4 (126-185)||(24529615-24529674)
chr4 (126-185)||(29978531-29978590)
chr4 (126-185)||(32112356-32112415)
chr4 (126-185)||(39294212-39294271)
chr4 (126-185)||(39754141-39754200)
chr4 (126-181)||(45070880-45070935)
chr4 (126-181)||(46996520-46996575)
chr4 (126-185)||(50038492-50038551)
chr4 (126-185)||(50045714-50045773)
chr4 (126-185)||(51126147-51126206)
chr4 (126-185)||(54569395-54569454)
chr4 (126-185)||(55131578-55131637)
chr4 (126-185)||(55501244-55501303)
chr4 (104-182)||(19754232-19754310)
chr4 (104-182)||(19785496-19785574)
chr4 (83-185)||(20542799-20542901)
chr4 (125-159)||(49806396-49806430)
chr4 (116-177)||(21142140-21142201)
chr4 (82-191)||(42184675-42184784)
chr4 (126-183)||(56420475-56420532)
chr4 (133-185)||(9968343-9968395)
chr4 (125-185)||(11583749-11583809)
chr4 (109-177)||(31262616-31262684)
chr4 (129-185)||(36721788-36721844)
chr4 (125-177)||(36786188-36786240)
chr4 (129-181)||(46996516-46996568)
chr4 (125-185)||(50038488-50038548)
chr4 (125-185)||(50045710-50045770)
chr4 (125-185)||(54787024-54787084)
[»] chr3 (35 HSPs)
chr3 (98-185)||(23783311-23783398)
chr3 (119-186)||(38014836-38014903)
chr3 (83-185)||(47931732-47931833)
chr3 (125-182)||(43898131-43898188)
chr3 (125-185)||(7672731-7672791)
chr3 (125-185)||(8126168-8126228)
chr3 (125-185)||(13083913-13083973)
chr3 (126-182)||(18480915-18480971)
chr3 (125-185)||(29076567-29076627)
chr3 (126-185)||(16127787-16127846)
chr3 (126-185)||(32589357-32589416)
chr3 (119-185)||(39530437-39530503)
chr3 (119-185)||(40326470-40326536)
chr3 (104-185)||(26043267-26043348)
chr3 (125-185)||(7672735-7672795)
chr3 (133-185)||(32833722-32833774)
chr3 (126-185)||(1043965-1044024)
chr3 (126-185)||(19679004-19679063)
chr3 (126-185)||(21659177-21659236)
chr3 (126-185)||(22995735-22995794)
chr3 (126-185)||(32833719-32833778)
chr3 (126-185)||(40760813-40760872)
chr3 (125-180)||(42595784-42595839)
chr3 (126-185)||(44435216-44435275)
chr3 (104-179)||(46967474-46967549)
chr3 (126-185)||(51760211-51760270)
chr3 (126-185)||(54680531-54680590)
chr3 (136-185)||(23005057-23005106)
chr3 (126-179)||(29676254-29676307)
chr3 (125-185)||(14626670-14626730)
chr3 (125-185)||(34205605-34205665)
chr3 (97-185)||(40504076-40504164)
chr3 (125-181)||(51204521-51204577)
chr3 (90-142)||(51859133-51859185)
chr3 (125-185)||(52638075-52638135)
[»] scaffold0340 (1 HSPs)
scaffold0340 (125-185)||(14071-14131)
[»] chr7 (31 HSPs)
chr7 (104-184)||(24733132-24733212)
chr7 (126-185)||(19531992-19532051)
chr7 (126-185)||(46221120-46221179)
chr7 (126-185)||(46578307-46578366)
chr7 (126-191)||(11032339-11032404)
chr7 (125-185)||(27942363-27942423)
chr7 (126-185)||(3498336-3498395)
chr7 (99-182)||(9503941-9504024)
chr7 (126-185)||(37066224-37066283)
chr7 (126-185)||(46477175-46477234)
chr7 (132-181)||(12171705-12171754)
chr7 (104-185)||(33471532-33471613)
chr7 (104-185)||(35593658-35593739)
chr7 (125-185)||(12307855-12307915)
chr7 (125-185)||(45833232-45833292)
chr7 (125-185)||(47778471-47778531)
chr7 (126-185)||(24166305-24166364)
chr7 (126-185)||(48590624-48590683)
chr7 (115-148)||(29205340-29205373)
chr7 (104-185)||(31758525-31758606)
chr7 (104-185)||(33471507-33471588)
chr7 (104-185)||(35593683-35593764)
chr7 (125-185)||(6250642-6250702)
chr7 (125-185)||(21387618-21387678)
chr7 (137-185)||(31319558-31319606)
chr7 (125-185)||(32490627-32490687)
chr7 (125-185)||(39024105-39024165)
chr7 (125-185)||(39970199-39970259)
chr7 (125-185)||(46578303-46578363)
chr7 (125-185)||(46658774-46658834)
chr7 (125-185)||(48392904-48392964)
[»] chr1 (43 HSPs)
chr1 (125-185)||(6169848-6169908)
chr1 (126-185)||(50998346-50998405)
chr1 (104-191)||(52253574-52253661)
chr1 (104-177)||(26453030-26453103)
chr1 (126-185)||(12062236-12062295)
chr1 (126-185)||(21852479-21852538)
chr1 (126-185)||(24023407-24023466)
chr1 (126-185)||(24478707-24478766)
chr1 (83-145)||(47293180-47293242)
chr1 (104-185)||(38824308-38824389)
chr1 (124-185)||(39216145-39216206)
chr1 (104-185)||(45239008-45239089)
chr1 (133-185)||(12993566-12993618)
chr1 (133-181)||(17622809-17622857)
chr1 (133-185)||(21909887-21909939)
chr1 (129-181)||(23079398-23079449)
chr1 (133-185)||(33738209-33738261)
chr1 (125-185)||(37255164-37255224)
chr1 (126-185)||(1252173-1252232)
chr1 (126-185)||(4682979-4683038)
chr1 (126-185)||(15311511-15311570)
chr1 (126-185)||(17310457-17310516)
chr1 (126-185)||(27549084-27549143)
chr1 (126-185)||(31909788-31909847)
chr1 (126-181)||(40341769-40341824)
chr1 (113-148)||(43738684-43738719)
chr1 (126-185)||(48605109-48605168)
chr1 (128-185)||(1358213-1358270)
chr1 (136-185)||(5852730-5852779)
chr1 (136-185)||(6763383-6763432)
chr1 (136-185)||(46517994-46518043)
chr1 (132-185)||(47293292-47293345)
chr1 (124-185)||(52879926-52879987)
chr1 (125-185)||(6758584-6758644)
chr1 (125-185)||(12447496-12447556)
chr1 (133-185)||(21909883-21909935)
chr1 (125-181)||(26423470-26423526)
chr1 (97-185)||(34598904-34598992)
chr1 (125-185)||(38824333-38824393)
chr1 (127-191)||(39216143-39216207)
chr1 (125-185)||(40341772-40341832)
chr1 (129-181)||(41154950-41155002)
chr1 (126-185)||(42140371-42140428)
[»] chr6 (13 HSPs)
chr6 (126-185)||(667770-667829)
chr6 (126-185)||(32786158-32786217)
chr6 (83-185)||(31577435-31577537)
chr6 (133-185)||(3212283-3212335)
chr6 (126-185)||(14804207-14804264)
chr6 (125-185)||(29938388-29938448)
chr6 (126-185)||(3343816-3343875)
chr6 (126-185)||(3418795-3418854)
chr6 (126-185)||(21478595-21478654)
chr6 (126-185)||(31759366-31759425)
chr6 (125-185)||(6047994-6048054)
chr6 (125-185)||(21478591-21478651)
chr6 (133-185)||(33169224-33169276)
[»] scaffold0635 (1 HSPs)
scaffold0635 (104-185)||(5430-5511)
[»] scaffold0013 (1 HSPs)
scaffold0013 (88-185)||(58301-58398)
[»] scaffold0172 (1 HSPs)
scaffold0172 (126-185)||(11623-11682)
[»] scaffold0063 (1 HSPs)
scaffold0063 (94-184)||(54641-54731)
[»] scaffold0128 (1 HSPs)
scaffold0128 (129-185)||(44642-44698)


Alignment Details
Target: chr5 (Bit Score: 119; Significance: 6e-61; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 35776623 - 35776485
Alignment:
Q  1 atgtgattgaatggagttatatttataatatgtaccatggaccattgattaaaaatatctattttaaatgattaagttgtagtacttcctccattgtcaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  35776623 atgtgattgaatggagttatatttataatatgtaccatagaccattgattaaaaatatctattttaaatgattaagtagtagtacttcctccattgttaa 35776524  T
Q  101 ttgtaagtaaatttaatattttttattcatttaattaat 139  Q
    || ||||||||| ||||||||||||||||||||||||||    
T  35776523 ttataagtaaatgtaatattttttattcatttaattaat 35776485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 30489135 - 30489194
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||||||    
T  30489135 ttcatttaattaattatgtatatagttcataatatagaccacatatatcattaattgaat 30489194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 15966744 - 15966685
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||||||| ||||| ||||||||||||||    
T  15966744 ttcattcaattaatgatgtatgtggtccataatataaaccacatacatcattaattgaat 15966685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 36329203 - 36329122
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| ||||||||| ||||   |||||| |||||||||||||| | || |||||||| ||| ||||||||||||||||||||    
T  36329203 taagcaaatttaattttttaagttcattcaattaatgatgtatgtggtacataatatgaaccacatatatcattaattgaat 36329122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 9004985 - 9005045
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| ||||| ||||||||||  ||||| || |||||||||||    
T  9004985 attcatttaattaatgatgtatgtagtctataatataaatcacatacattattaattgaat 9005045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 36137053 - 36137113
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| ||||||||||| ||||  ||||| ||||||||||||||    
T  36137053 attcattcaattaatgatgtatgtagtccataatttaaatcacatacatcattaattgaat 36137113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 7336894 - 7336953
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  7336894 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 7336953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 18942025 - 18942084
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||||| || ||||||||| || ||||| ||||||||||||||    
T  18942025 ttcattcaattaatgatgtatatggttcataatatagaccacatacatcattaattgaat 18942084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 34102114 - 34102173
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||||    
T  34102114 ttcattgaattaatgatgtatgtagtccatattatgaaccacatacatcattaattgaat 34102173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 34186456 - 34186397
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  34186456 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 34186397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 37554386 - 37554445
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | || |||||||||||||||||| || |||||||||||    
T  37554386 ttcattcaattaatgatgtatgtggttcataatataaactacatacattattaattgaat 37554445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 14571025 - 14571106
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| |||||| || ||||  ||||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  14571025 taagcaaattttattttttagattcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 14571106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 39916302 - 39916383
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| |  ||||  ||||||||||||| |||||||| || |||||| ||||||| ||||| || |||||||||||    
T  39916302 taagtaaattttactttttagattcatttaattattgatgtatgtaatccatattataaaccacatacattattaattgaat 39916383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 14274172 - 14274232
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| | |||||||||||| | ||||||| ||||||||||||| |||||||| |||||    
T  14274172 attcattcatttaatgatgtatgtggtccatattataaactacatacatcattaaatgaat 14274232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 35068013 - 35067961
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||| ||| || ||||||||| |||||||| ||||||||||||||    
T  35068013 aattaatgatgtgtatggttcataatatagactacatacatcattaattgaat 35067961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 35776298 - 35776246
Alignment:
Q  179 attgaatcaatatttgaaccatgatcgagaaatacctccatatttaacctatg 231  Q
    ||||||||||| ||| ||||||||| ||||||| ||||||| |||||||||||    
T  35776298 attgaatcaatgtttaaaccatgattgagaaatgcctccatttttaacctatg 35776246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 37637286 - 37637370
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaa 188  Q
    ||||||||||| || ||||   |||||| |||||||||||||| |    |||||||||||||||||| || ||||||||||||||    
T  37637286 taagtaaattttattttttaagttcattcaattaatgatgtatgtgactcataatataaactacatacattattaattgaatcaa 37637370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 1723344 - 1723289
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||||| |||||||||| ||||| || |||||||||||| ||||| ||||||||||    
T  1723344 ttcattcaattaatgatatatatggttcataatataaaccacatacatcattaatt 1723289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 15965995 - 15966054
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||| ||| ||||||| ||||| ||||||||||||||    
T  15965995 ttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaat 15966054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 21152689 - 21152630
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||||||    
T  21152689 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 21152630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 21159824 - 21159765
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||||||    
T  21159824 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 21159765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 21163631 - 21163572
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||||||    
T  21163631 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 21163572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 22473977 - 22474036
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||| |||||||||||  ||||||||| ||||||| ||||| |||||||| |||||    
T  22473977 ttcatttatttaatgatgtacgtagtccatattataaacaacatacatcattaaatgaat 22474036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 37685009 - 37685068
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | || ||||||||| |||||||| || |||||||||||    
T  37685009 ttcattcaattaatgatgtatgtggttcataatatagactacatacattattaattgaat 37685068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 38860901 - 38860842
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  38860901 ttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 38860842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 40914214 - 40914155
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||| |||||||||||| | ||||||| ||||||| |||||||| ||||| |||||    
T  40914214 ttcatttatttaatgatgtatgtggtccatattataaaccacatatataattaaatgaat 40914155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 43340454 - 43340513
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| || |||||||||||    
T  43340454 ttcattcaattaatgatgtatgtggtccatattataaaccacataaattattaattgaat 43340513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 43585596 - 43585537
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | || |||||||| ||| ||||| ||||||||||||||    
T  43585596 ttcattcaattaatgatgtatgtggttcataatatgaaccacatacatcattaattgaat 43585537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 20503272 - 20503327
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| ||||    ||||||||||||||| ||||||||||||||    
T  20503272 ttcattcaattaatgatgtatgtagt----aatataaactacatacatcattaattgaat 20503327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 32068040 - 32067954
Alignment:
Q  99 aattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| |||| ||||||||  ||||  ||||||| ||||||||||| |  | ||||||||||| ||| ||||| ||||||||||||||    
T  32068040 aattataagcaaatttaactttttaaattcattcaattaatgatgaacgtggtccataatatgaaccacatacatcattaattgaat 32067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 36964338 - 36964272
Alignment:
Q  119 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| ||||||| ||||| |||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  36964338 tttttgattcattcaattagtgatgtatgtggtctataatatgaaccacatacatcattaattgaat 36964272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 14416423 - 14416500
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||| |||||| || ||||  ||||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||    
T  14416423 taagcaaattttattttttagattcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaatt 14416500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 26168237 - 26168286
Alignment:
Q  136 taatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  26168237 taatgatgtatgtggtccatattataaaccacatacatcattaattgaat 26168286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 27990374 - 27990455
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| ||||   ||| || |||||||||||||| | || |||| |||| | |||||| ||||||||||||||    
T  27990374 taagtaaatttaattttttaagttctttcaattaatgatgtatttggttcatattatagattacatacatcattaattgaat 27990455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 37685093 - 37685012
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| |||||| || ||||  ||||||| ||||||| |||||| ||||| ||| ||| ||| ||||| ||||||||||||||    
T  37685093 taagcaaattttattttttagattcattcaattaataatgtatgtagtctatattatgaaccacatacatcattaattgaat 37685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 11784302 - 11784384
Alignment:
Q  104 taagtaaatttaatatttttta--ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| || |||||||  |||||| ||||||| |||||| |||| ||||||||| |  ||||| ||||||||||||||    
T  11784302 taagtaaattttat-ttttttaggttcattcaattaataatgtatgtagttcataatatacatcacatacatcattaattgaat 11784384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 12165322 - 12165382
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| | ||  ||||||||||  | ||| ||||||||||||||    
T  12165322 attcatttaattaatgatgtatgtggtatataatataaatcatatacatcattaattgaat 12165382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 14571110 - 14571050
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | || ||||||||  || ||||| ||||||||||||||    
T  14571110 attcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaat 14571050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 24433581 - 24433633
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  24433581 aattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 24433633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 31947544 - 31947492
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||  |||||||||| ||| ||||| || |||||||||||    
T  31947544 aattaatgatgtatatgatccataatatgaaccacatacataattaattgaat 31947492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 34102177 - 34102121
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    ||||||| |||||||||||||| | || ||||||||  |||||||| ||||||||||    
T  34102177 attcattcaattaatgatgtatgtggttcataatatggactacatacatcattaatt 34102121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 35907926 - 35907874
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||| |||||||||||| |  | ||| ||||||||||||||    
T  35907926 aattaatgatgtatatggtccataatatagatcatatacatcattaattgaat 35907874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 20524179 - 20524264
Alignment:
Q  100 attgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| |||||| ||||| ||||  ||||||| ||||||| |||||||| ||||||| ||||||| ||||||||||||||||||||    
T  20524179 attgttagtaaaattaattttttagattcattcaattaataatgtatatggtccatattataaaccacatatatcattaattgaat 20524264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 13832040 - 13832106
Alignment:
Q  119 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| ||||||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||    
T  13832040 tttttgattcattcaattaatgatgtatgtggtccataatatgaaccacatatatcattaattgaat 13832106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 42149260 - 42149168
Alignment:
Q  93 attgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||| |||| |||||| || |||| | |||||| |||||||||||||||| |||  |||||||||  ||||| ||||||||||||||    
T  42149260 attgtcaattataagcaaatttcattttttatgttcattcaattaatgatgtatatggtctctaatataaatcacatacatcattaattgaat 42149168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 44282394 - 44282307
Alignment:
Q  98 caattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| |||| ||||||||| ||||  ||||||| |||||||||||||| | ||||| ||||| ||| ||||| ||||||||||||||    
T  44282394 caattataagcaaatttaattttttagattcattcaattaatgatgtatgtggtccacaatatgaaccacatacatcattaattgaat 44282307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 5040080 - 5040166
Alignment:
Q  99 aattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| ||||||||||| | |||||  ||||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  5040080 aattataagtaaatttgacattttagattcattcaattaatgatgtatgtggtccatattatgaacaacatacatcattaattgaat 5040166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 34194598 - 34194658
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | ||||||| ||| ||||||||| ||||||||||||||    
T  34194598 attcattcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaat 34194658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 34326347 - 34326287
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| ||||||||||||||||||||  || ||||||| ||||| ||||||||||||||    
T  34326347 attcattcaattaatgatgtatatagtctttattataaacaacatacatcattaattgaat 34326287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 35874483 - 35874555
Alignment:
Q  105 aagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcatt 177  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||||  || ||||||  ||||| ||||||    
T  35874483 aagtaaaatttatattttatattcatttaattaatgatgtatatagtctttattataaatcacatacatcatt 35874555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 44838820 - 44838872
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||    
T  44838820 aattaatgatgtatgtggtccataatatgaaccacatatatcattaattgaat 44838872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 27781923 - 27781982
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  27781923 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 27781982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 35969701 - 35969760
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||||| ||  ||||||||||||||||| || |||||||||||    
T  35969701 ttcattcaattaatgatgtatatggtttataatataaactacatacattattaattgaat 35969760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 37922851 - 37922910
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  37922851 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 37922910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 38884047 - 38883988
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  38884047 ttcattcaattaatgatgtatgttgtccatattataaaccacatacatcattaattgaat 38883988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 40802242 - 40802301
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  40802242 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 40802301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 41177997 - 41178056
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||||||| ||||  ||||||||||||||    
T  41177997 ttcattcaattaatgatgtatgtggtccataatataaaccacatgcatcattaattgaat 41178056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 42631880 - 42631821
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  42631880 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 42631821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 43484033 - 43483974
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  43484033 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 43483974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 29730697 - 29730779
Alignment:
Q  97 tcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaa 179  Q
    |||||| |||| ||||||||| ||||  |||||||||||||||||||||| | ||||||| ||| ||| || || ||||||||    
T  29730697 tcaattataagcaaatttaattttttggattcatttaattaatgatgtatgtggtccatattatgaaccacgtacatcattaa 29730779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 3611892 - 3611811
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||| || || |||||  |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  3611892 taagtaaaattgatttttttggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 3611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 8568859 - 8568918
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  8568859 ttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 8568918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 26492410 - 26492351
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  26492410 ttcattgaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 26492351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 32033050 - 32032991
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| |||||| |  |||||||||| ||| ||||| ||||||||||||||    
T  32033050 ttcatttaattaataatgtatttgatccataatatgaaccacatacatcattaattgaat 32032991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 34188419 - 34188360
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||  ||||| ||||||||||||||    
T  34188419 ttcattcaattaatgatgtatgtggtccataatatgaataacatacatcattaattgaat 34188360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 34194661 - 34194602
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| |||| ||||||||  || ||||| ||||||||||||||    
T  34194661 ttcattcaattaatgatgtatgtagttcataatatggaccacatacatcattaattgaat 34194602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 35063561 - 35063502
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| | || |||| |||| || ||||| ||||||||||||||    
T  35063561 ttcatttaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaat 35063502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 39655518 - 39655459
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | |||||||||||  || ||||| ||||||||||||||    
T  39655518 ttcattcaattaatgatgtatgtggtccataatatggaccacatacatcattaattgaat 39655459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 42795196 - 42795137
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| ||||||||||||||||  ||||||||||| |  ||||| ||||||||||||||    
T  42795196 ttcattcaattaatgatgtatatgttccataatatagatcacatacatcattaattgaat 42795137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 24726136 - 24726078
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaa 184  Q
    |||||| ||||||||||| ||   ||||||| ||||||| |||||||||||||||||||    
T  24726136 ttcattcaattaatgatggatgcggtccatattataaaccacatatatcattaattgaa 24726078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 26191866 - 26191817
Alignment:
Q  130 tttaattaatgatgtatatagtccataatataaactacatatatcattaa 179  Q
    |||| |||||||||||| | || |||||||| ||||||||||||||||||    
T  26191866 tttatttaatgatgtatgtggttcataatatgaactacatatatcattaa 26191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 7256925 - 7256985
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| ||||||| |||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  7256925 attcattcaattaataatgtatgtggtccatattatgaacgacatacatcattaattgaat 7256985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 19293118 - 19293058
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| ||| |||||||||| | ||| ||||||||||| ||||| |||||| |||||||    
T  19293118 attcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaat 19293058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 29916233 - 29916173
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||| |||||||||||  || ||| |||| |||||||| ||||||||||||||    
T  29916233 attcattcaattgatgatgtatatgatctatattatagactacatacatcattaattgaat 29916173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 40716784 - 40716840
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    ||||||| |||||||||||||| | || |||| ||||||| ||||| ||||||||||    
T  40716784 attcattcaattaatgatgtatgtggtacatattataaaccacatacatcattaatt 40716840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 29573852 - 29573908
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  29573852 attcattaaattaatgatgtatatagtccataatataaaccacatacatcattaatt 29573908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 921949 - 921858
Alignment:
Q  94 ttgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||| ||||||||||| || ||||   |||||| |||||||||||||| |||||||||||||| |  ||||| ||||||||||||||    
T  921949 ttgtcaattataagtaaatttgattttttaagttcattcaattaatgatgtatctagtccataatatagatcacatacatcattaattgaat 921858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 42579057 - 42579117
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||||    
T  42579057 attcatttaattaatgatgtatgtagtccatattatgaaccacatacatcattaattgaat 42579117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 5144369 - 5144310
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  5144369 ttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 5144310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 5204931 - 5204990
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  5204931 ttcatttaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 5204990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 34466137 - 34466196
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||    
T  34466137 ttcattcaattaatgatgtatgtagtccataatatgaaccacatacatcattaattgaat 34466196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 9071243 - 9071303
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| ||||| ||||||||||| ||||| || |||||||||||    
T  9071243 attcattcaattaatgatgtatgtagtctataatataaaccacatacattattaattgaat 9071303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 10099591 - 10099650
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| | ||  |||||||| || ||||||||||||||||||||    
T  10099591 ttcatttaattaatgatgtatgtggtttataatatagaccacatatatcattaattgaat 10099650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 26567737 - 26567678
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| ||||| |||||||| ||||||||| ||||||| ||||| ||||||||||||||    
T  26567737 ttcattcaattattgatgtatgtagtccatattataaaccacatacatcattaattgaat 26567678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 30905163 - 30905222
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||| |||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  30905163 ttcatttaattattgatgtatgtggtccatattataaaccacatacatcattaattgaat 30905222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 32070562 - 32070503
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  32070562 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 32070503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 32473466 - 32473565
Alignment:
Q  82 gtacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    ||||| |||||||| | || | |||| |||||| || ||||  ||||||| |||||||||||||| | || ||||||||| || ||||||||||||||||    
T  32473466 gtactccctccatttttaaatataagcaaattttattttttagattcattcaattaatgatgtatgtggttcataatatagaccacatatatcattaatt 32473565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 9158075 - 9158017
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaa 184  Q
    |||||| |||||| ||||||||||||||||| ||| ||| ||||| |||||||||||||    
T  9158075 ttcattcaattaacgatgtatatagtccatattatgaaccacatacatcattaattgaa 9158017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 31596809 - 31596895
Alignment:
Q  99 aattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| |||||||||||||| |||| |||||||| |||||||||||||| |  |||||| ||| ||| ||||| ||| |||| |||||    
T  31596809 aattataagtaaatttaattttttatattcattcaattaatgatgtatgtgatccatattatgaacgacatacatcgttaaatgaat 31596895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 42955177 - 42955099
Alignment:
Q  83 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatata 161  Q
    |||||||||||||||||||| |||| || ||| | |||||  ||| ||| ||||||||||||||||  |||||||||||    
T  42955177 tacttcctccattgtcaattataagcaattttgacattttagatttattcaattaatgatgtatatgatccataatata 42955099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 10041559 - 10041640
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| |||||| | |||||  |||||||||||||||||||||| | ||  |||||||| || ||||| ||||||||||||||    
T  10041559 taagaaaattttacattttagattcatttaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaat 10041640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 8554709 - 8554769
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||| ||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  8554709 attcatttaattaatgatatatgtggtccatattatgaaccacatacatcattaattgaat 8554769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 32346116 - 32346175
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||||| |||||||||||||| || ||| || |||||||||||    
T  32346116 attcattcaattaatgatgtatat-gtccataatataaattatatacattattaattgaat 32346175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 37486045 - 37486097
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  37486045 aattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 37486097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 324885 - 324838
Alignment:
Q  138 atgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  324885 atgatgtatgtggtccatattataaactacatacatcattaattgaat 324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 2795411 - 2795356
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||    
T  2795411 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaatt 2795356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 4898266 - 4898207
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||||||    
T  4898266 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 4898207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 4945660 - 4945601
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||||||    
T  4945660 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 4945601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 9709759 - 9709700
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| || ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  9709759 ttcattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 9709700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 17844052 - 17843993
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||| | ||| ||||||||||||||    
T  17844052 ttcattcaattaatgatgtatgtggtccatattataaaccatatacatcattaattgaat 17843993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 24971306 - 24971247
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| |||||||||||||  || ||||| ||||||| ||||||    
T  24971306 ttcattcaattaatgatgtatgtagtccataatatggaccacatacatcattagttgaat 24971247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 33618236 - 33618295
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| | |||||||||||||| || ||||||||| |||||||| |||||||| |||||    
T  33618236 ttcattcatttaatgatgtatatggttcataatatagactacatacatcattaaatgaat 33618295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 40739531 - 40739590
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||| ||| | ||||||||||| ||| ||||| ||||||||||||||    
T  40739531 ttcattcaattaatgatatatgtggtccataatatgaaccacatacatcattaattgaat 40739590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 43514857 - 43514798
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||||| ||| ||| ||| ||| ||||| ||||||||||||||    
T  43514857 ttcattcaattaatgatgtatatggtctatattatgaaccacatacatcattaattgaat 43514798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 42579163 - 42579065
Alignment:
Q  83 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||| |||||||| | || | ||||||||||| |  ||||  ||||||| |||||||||||||| | || ||||||||  |||||||| ||||||||||    
T  42579163 tactccctccatttttaaatataagtaaattttactttttagattcattcaattaatgatgtatgtggttcataatatggactacatacatcattaatt 42579065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 8382921 - 8382840
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| || ||||   |||||| ||||||| || ||||| || |||||||||||| |||||  |||||||||||||    
T  8382921 taagtaaattttattttttaggttcattcaattaataatatatatggttcataatataaaccacatacgtcattaattgaat 8382840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 40739615 - 40739534
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| || ||||   |||||| |||||||||||||| | || |||| |||  || ||||||||||||||||||||    
T  40739615 taagtaaatttgattttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatatatcattaattgaat 40739534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 2795348 - 2795408
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| | || |||| |||  || ||||| ||||||||||||||    
T  2795348 attcatttaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaat 2795408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 11093632 - 11093568
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaat 189  Q
    ||||||||||||||| ||||||||||||  || |||| || ||||| |||||| | |||||||||    
T  11093632 attcatttaattaattatgtatatagtctttattatagaccacatacatcatttaatgaatcaat 11093568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 24971243 - 24971303
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| || ||||||||||| | ||||||| |||  |||||||| ||||||||||||||    
T  24971243 attcattcaactaatgatgtatgtggtccatattatggactacatacatcattaattgaat 24971303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 29771756 - 29771816
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| |  |||||| ||| ||| ||||| ||||||||||||||    
T  29771756 attcattcaattaatgatgtatgtgatccatattatgaaccacatacatcattaattgaat 29771816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 34240917 - 34240866
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  34240917 aattaatgatgtatgtggtccataatatgaaccacata-atcattaattgaat 34240866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 45123841 - 45123893
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| |||||||| ||||||||| ||||||| ||||| || |||||||||||    
T  45123841 aattattgatgtatgtagtccatattataaaccacatacattattaattgaat 45123893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 17028334 - 17028275
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  17028334 ttcattcaattaatgatgtatgtggtccatattataaactacatatatcattaattgaat 17028275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 13743896 - 13743956
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  13743896 attcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 13743956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 40952577 - 40952637
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||| || |||||||||||    
T  40952577 attcattcaattaatgatgtatgtagtctataatataaactacatacattattaattgaat 40952637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 11583746 - 11583805
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||||||||| ||||||||||||||    
T  11583746 ttcattcaattaatgatgtatgtggtccataatatgaactacatacatcattaattgaat 11583805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 26206695 - 26206636
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| | ||||||| ||| ||| ||||||||||||||||||||    
T  26206695 ttcatttaattaatgatgtatgtggtccatattatgaaccacatatatcattaattgaat 26206636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 30162650 - 30162709
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||    
T  30162650 ttcattcaattaatgatgtatgtggtccataatatgaaccacatatatcattaattgaat 30162709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 48042630 - 48042689
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| | ||| ||||||| ||||||||| ||||||||||||||    
T  48042630 ttcatttaattaatgatgtatgtggtctataatatgaactacatacatcattaattgaat 48042689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 44551230 - 44551296
Alignment:
Q  119 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||  | ||| ||||||||||||||    
T  44551230 ttttatattcattgaattaatgatgtatatggtccataatataaatcatatacatcattaattgaat 44551296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 49745562 - 49745505
Alignment:
Q  128 catttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  49745562 catttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 49745505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 2941834 - 2941766
Alignment:
Q  81 agtacttcctccattgtcaattgtaagtaaa-tttaatattttttattcatttaattaatgatgtatat 148  Q
    |||||||||||||||||||||| ||| |||| |||||| ||||  |||||| |||||||||||||||||    
T  2941834 agtacttcctccattgtcaattataattaaattttaattttttaaattcatgtaattaatgatgtatat 2941766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 5048533 - 5048481
Alignment:
Q  129 atttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||||||||||||||| | | ||||||| ||||||||||||||||||||||||    
T  5048533 atttaattaatgatgtgtgtggtccatattataaactacatatatcattaatt 5048481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 16450201 - 16450257
Alignment:
Q  129 atttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||| || |  |||||||||||||| ||||||||||||||||||||    
T  16450201 atttaattaatgatgcatgtgatccataatataaaccacatatatcattaattgaat 16450257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 24448683 - 24448755
Alignment:
Q  105 aagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcatt 177  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||||  || ||||||  ||||| ||||||    
T  24448683 aagtaaaatttatattttatattcatttaattaatgatgtatatagtctttattataaatcacatacatcatt 24448755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 53403093 - 53403033
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||  |  |||||||||||||| ||||| ||||||||||||||    
T  53403093 attcatttaattaatgatgtacgtgatccataatataaaccacatacatcattaattgaat 53403033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 4711507 - 4711448
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||| |||| | ||||||||||| ||| ||||| ||||||||||||||    
T  4711507 ttcatttaattaatgaagtatgtggtccataatatgaaccacataaatcattaattgaat 4711448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 33084756 - 33084815
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| | ||||||||||||||||||    
T  33084756 ttcattcaattaatgatgtatgtggtccataatatgaaccagatatatcattaattgaat 33084815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 41788960 - 41789019
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  41788960 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 41789019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 43635874 - 43635937
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaa 188  Q
    ||||||| |||||||||||||| | || |||| ||| ||||||||| |||||||||||||||||    
T  43635874 attcattcaattaatgatgtatgtggttcatattatgaactacatacatcattaattgaatcaa 43635937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 44639785 - 44639844
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  44639785 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 44639844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 48079617 - 48079558
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| ||||| |||||||| ||||||||| ||||||| ||||| ||||||||||||||    
T  48079617 ttcattcaattattgatgtatgtagtccatattataaaccacatacatcattaattgaat 48079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 34458997 - 34459083
Alignment:
Q  99 aattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| ||||||||||| || ||||   |||||| ||||||  |||||||| |||||| |||| ||| ||||||||||||||||||||    
T  34458997 aattataagtaaatttgattttttaggttcattcaattaaacatgtatatggtccattatatgaaccacatatatcattaattgaat 34459083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 53508540 - 53508598
Alignment:
Q  127 tcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  53508540 tcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 53508598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 53551695 - 53551637
Alignment:
Q  127 tcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  53551695 tcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 53551637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 33659895 - 33659814
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| || ||||   || ||| |||||||||||||| | || ||||||||| |||||||| ||||||||||||||    
T  33659895 taagtaaattttattttttaggtttattcaattaatgatgtatgtggttcataatatatactacatacatcattaattgaat 33659814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 42013163 - 42013244
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| |  ||||  ||||||| |||||||||||||| | ||| ||| ||||||| ||||| ||||||||||||||    
T  42013163 taagtaaattttactttttaaattcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaat 42013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 11511802 - 11511714
Alignment:
Q  93 attgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||| ||||| |||| ||||||||  ||||   ||||||||||||||||||||| | ||||| ||||||||| | ||| ||||||||||    
T  11511802 attgccaattataagcaaatttaactttttaggttcatttaattaatgatgtatgtggtccacaatataaaccatatacatcattaatt 11511714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 19754309 - 19754257
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| |||| ||||||||  || ||||||||||||||||||||    
T  19754309 aattaatgatgtatgtagttcataatatggaccacatatatcattaattgaat 19754257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 19785497 - 19785549
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| |||| ||||||||  || ||||||||||||||||||||    
T  19785497 aattaatgatgtatgtagttcataatatggaccacatatatcattaattgaat 19785549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 24331527 - 24331467
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| | || ||||||||| | |||||| || |||||||||||    
T  24331527 attcatttaattaatgatgtatgtggttcataatatagattacatacattattaattgaat 24331467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 25856048 - 25856108
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| |||||||||| | || ||||||||| || ||||| ||||||||||||||    
T  25856048 attcatttaatcaatgatgtatgtggttcataatatagaccacatacatcattaattgaat 25856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 43635930 - 43635878
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| |||| |||||||| ||| ||||| ||||||||||||||    
T  43635930 aattaatgatgtatgtagttcataatatgaaccacatacatcattaattgaat 43635878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 46779417 - 46779345
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcat 176  Q
    |||| |||||| || ||||  |||||||||||||||||||||| | || |||||||||||| ||||| |||||    
T  46779417 taagcaaattttattttttagattcatttaattaatgatgtatgtggttcataatataaaccacatacatcat 46779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 17659504 - 17659563
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| | | ||| ||||||||||||||||||||    
T  17659504 ttcattcaattaatgatgtatgtggtccatattttgaaccacatatatcattaattgaat 17659563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 23329471 - 23329412
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| ||||| |||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  23329471 ttcattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaat 23329412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 23710874 - 23710933
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| ||||| |||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  23710874 ttcattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaat 23710933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 24529674 - 24529615
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  24529674 ttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 24529615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 29978531 - 29978590
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  29978531 ttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 29978590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 32112415 - 32112356
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  32112415 ttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 32112356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 39294212 - 39294271
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||| ||| | ||||||||||| |||| |||| ||||||||||||||    
T  39294212 ttcattcaattaatgatatatgtggtccataatatgaactgcatacatcattaattgaat 39294271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 39754200 - 39754141
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||| || | || |||| |||| |||||||| ||||||||||||||    
T  39754200 ttcatttaattaatgatgcatctggttcatattatagactacatacatcattaattgaat 39754141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 45070935 - 45070880
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    ||||||||||||||||||||| | ||||||||||| ||  ||||| ||||||||||    
T  45070935 ttcatttaattaatgatgtatgtggtccataatatgaataacatacatcattaatt 45070880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 46996575 - 46996520
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    ||||||||||||||||| ||| |||| |||||||| ||| ||||| ||||||||||    
T  46996575 ttcatttaattaatgatttatgtagttcataatatgaaccacatacatcattaatt 46996520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 50038551 - 50038492
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| || |||||| ||| ||| ||||| ||||||||||||||    
T  50038551 ttcattcaattaatgatgtatgtaatccatattatgaaccacatacatcattaattgaat 50038492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 50045773 - 50045714
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| || |||||| ||| ||| ||||| ||||||||||||||    
T  50045773 ttcattcaattaatgatgtatgtaatccatattatgaaccacatacatcattaattgaat 50045714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 51126206 - 51126147
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||| |||||||| || ||||| ||||||||||||||    
T  51126206 ttcattcaattaatgatgtatgtggtctataatatagaccacatacatcattaattgaat 51126147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 54569395 - 54569454
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| || |||||||| || ||||||||||||| ||| ||||| ||||||||||||||    
T  54569395 ttcattcaactaatgatgcatgtagtccataatatgaaccacatacatcattaattgaat 54569454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 55131637 - 55131578
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| ||||||| |||||| |  |||||||||||||| ||||| ||||||||||||||    
T  55131637 ttcattcaattaattatgtatgtgctccataatataaacaacatacatcattaattgaat 55131578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 55501303 - 55501244
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||| ||||| | || |||||||||||| ||||| ||||||||||||||    
T  55501303 ttcattcaattaatggtgtatgtggttcataatataaaccacatacatcattaattgaat 55501244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 19754232 - 19754310
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 182  Q
    ||||||||||| |  ||||  ||||||| |||||||||| ||| | ||||||| ||| ||||||||| |||||||||||    
T  19754232 taagtaaattttactttttagattcattcaattaatgatatatgtggtccatattatgaactacatacatcattaattg 19754310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 19785574 - 19785496
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 182  Q
    ||||||||||| |  ||||  ||||||| |||||||||| ||| | ||||||| ||| ||||||||| |||||||||||    
T  19785574 taagtaaattttactttttagattcattcaattaatgatatatgtggtccatattatgaactacatacatcattaattg 19785496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 20542799 - 20542901
Alignment:
Q  83 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 182  Q
    ||||||||||||| | |||| |||||||||||    ||||  ||||||| |||||||||||||| | |   |||||||| || ||||| |||||||||||    
T  20542799 tacttcctccatttttaattataagtaaattttgatttttagattcattcaattaatgatgtatgtgggttataatatagaccacatacatcattaattg 20542898  T
Q  183 aat 185  Q
    |||    
T  20542899 aat 20542901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 49806396 - 49806430
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataata 159  Q
    ||||||||||||||||||||||||||| |||||||    
T  49806396 attcatttaattaatgatgtatatagttcataata 49806430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 21142201 - 21142140
Alignment:
Q  116 atattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcatt 177  Q
    |||||||  |||||||||||||||||||||||| |||  || ||||||||| ||| ||||||    
T  21142201 atattttagattcatttaattaatgatgtatatggtctttattataaactaaatacatcatt 21142140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 191
Target Start/End: Complemental strand, 42184784 - 42184675
Alignment:
Q  82 gtacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    ||||| ||| |||||| |||| ||| |||||||||| ||||  ||||||| ||||||| |||||| |  |  ||||||||||| ||||| ||| ||||||    
T  42184784 gtactcccttcattgttaattataaataaatttaattttttagattcattcaattaataatgtatgtgatttataatataaaccacatacatcgttaatt 42184685  T
Q  182 gaatcaatat 191  Q
     ||| |||||    
T  42184684 aaatgaatat 42184675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 56420532 - 56420475
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattga 183  Q
    |||||| |||||||||||||| ||||||||  ||| ||| ||||| ||||||||||||    
T  56420532 ttcattcaattaatgatgtatgtagtccatgttatgaaccacatacatcattaattga 56420475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 9968395 - 9968343
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  9968395 aattaatgatgtatgtggtccatattattaaccacatacatcattaattgaat 9968343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 11583809 - 11583749
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| |||| |||| |||  || ||||| ||||||||||||||    
T  11583809 attcattcaattaatgatgtatgtagttcatattatggaccacatacatcattaattgaat 11583749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 31262616 - 31262684
Alignment:
Q  109 aaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcatt 177  Q
    |||||||||||||| |||| ||||||| |||||||||| |  || ||| || | |||||||||||||||    
T  31262616 aaatttaatattttatattaatttaataaatgatgtatgtgatctatattaaagactacatatatcatt 31262684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 36721844 - 36721788
Alignment:
Q  129 atttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| ||||| |||||| | ||||||| ||| |||||||||||||||||| |||||    
T  36721844 atttatttaataatgtatgtggtccatattattaactacatatatcattaaatgaat 36721788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 36786188 - 36786240
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcatt 177  Q
    ||||||| ||||||||||||||||||||  || ||||||| ||||| ||||||    
T  36786188 attcattcaattaatgatgtatatagtctttattataaaccacatacatcatt 36786240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 46996516 - 46996568
Alignment:
Q  129 atttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||||||||||||||||| | || |||| ||| ||||||||| ||||||||||    
T  46996516 atttaattaatgatgtatgtggttcatattatgaactacataaatcattaatt 46996568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 50038488 - 50038548
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | || ||||||||  | |||||| ||||||||||||||    
T  50038488 attcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaat 50038548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 50045710 - 50045770
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | || ||||||||  | |||||| ||||||||||||||    
T  50045710 attcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaat 50045770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 54787084 - 54787024
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| ||| |||||||||| | ||| ||||||||||| ||||| |||||| |||||||    
T  54787084 attcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaat 54787024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 23783311 - 23783398
Alignment:
Q  98 caattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| |||| |||||||||  |||  ||||||| |||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||    
T  23783311 caattataagcaaatttaattgtttaaattcattcaattaatgatgtatatggtccataatatgaaccacatacatcattaattgaat 23783398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 38014903 - 38014836
Alignment:
Q  119 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatc 186  Q
    ||||||||||||| ||||||| |||||| | ||||||||||||||||||||  |||||||||||||||    
T  38014903 ttttttattcattcaattaataatgtatgtggtccataatataaactacatggatcattaattgaatc 38014836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 47931833 - 47931732
Alignment:
Q  83 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 182  Q
    |||| ||||||||| ||||| |||| ||||||||| ||||   || ||| |||||||||||||| ||||||||||||| ||| |||||||||| ||||||    
T  47931833 tactccctccattgccaattataagcaaatttaattttttaggtttattcaattaatgatgtatgtagtccataatatgaaccacatatatca-taattg 47931735  T
Q  183 aat 185  Q
    |||    
T  47931734 aat 47931732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 43898131 - 43898188
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 182  Q
    ||||||| |||||||||||||||| ||||||||||| ||| ||||| |||||||||||    
T  43898131 attcattcaattaatgatgtatatggtccataatatgaaccacatacatcattaattg 43898188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 7672731 - 7672791
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||||||| ||||||||||||||    
T  7672731 attcattcaattaatgatatatctagttcataatatagactacataaatcattaattgaat 7672791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 8126168 - 8126228
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||| |||||| |  |||||| ||||||| ||||||||||||||||||||    
T  8126168 attcatttaattaattatgtatgtgatccatattataaaccacatatatcattaattgaat 8126228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 13083973 - 13083913
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| |  |||||||||| ||| ||||| ||||||||||||||    
T  13083973 attcatttaattaatgatgtatgtgatccataatatgaacaacatacatcattaattgaat 13083913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 18480915 - 18480971
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 182  Q
    ||||||||||||||||||||| | ||||||| ||||||| ||||| |||||||||||    
T  18480915 ttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattg 18480971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 29076627 - 29076567
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | |||||| |||||||  ||||||||||||||||||||    
T  29076627 attcattcaattaatgatgtatgtggtccatgatataaatcacatatatcattaattgaat 29076567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 16127787 - 16127846
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  16127787 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 16127846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 32589416 - 32589357
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  32589416 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 32589357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 39530503 - 39530437
Alignment:
Q  119 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  39530503 ttttttgttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 39530437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 40326470 - 40326536
Alignment:
Q  119 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| ||||||| |||||||||||||| | || |||| ||||||| ||||| ||||||||||||||    
T  40326470 tttttgattcattcaattaatgatgtatgtggttcatattataaaccacatacatcattaattgaat 40326536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 26043267 - 26043348
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| |  ||||  ||||||| ||||||||||||| || ||||||| ||| ||| ||||| ||||||||||||||    
T  26043267 taagtaaattttactttttagattcattgaattaatgatgtacatggtccatattatgaaccacatacatcattaattgaat 26043348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 7672795 - 7672735
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||| ||| ||||| ||| ||| ||||| ||||||||||||||||||    
T  7672795 attcattcaattaatgatttatgtagtctatattatgaactagatatatcattaattgaat 7672735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 32833774 - 32833722
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||| ||| ||||||||| ||||||||||||||    
T  32833774 aattaatgatgtatgtggtccatattatgaactacatacatcattaattgaat 32833722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 1044024 - 1043965
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| |  || ||| ||||| ||||||| ||||||||||||||    
T  1044024 ttcatttaattaatgatgtatgtgatctatattataagctacatacatcattaattgaat 1043965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 19679063 - 19679004
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| ||||||||  ||| ||| ||||| ||||||||||||||    
T  19679063 ttcattcaattaatgatgtatgtagtccatgttatgaaccacatacatcattaattgaat 19679004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 21659177 - 21659236
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| |  | ||||||||| || ||||||||||||||||||||    
T  21659177 ttcattcaattaatgatgtatgtgattcataatatagaccacatatatcattaattgaat 21659236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 22995735 - 22995794
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| | ||  ||||||| ||| ||||| ||||||||||||||    
T  22995735 ttcatttaattaatgatgtatgtggtttataatatgaaccacatacatcattaattgaat 22995794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 32833719 - 32833778
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| |||| ||||||||  || ||||| ||||||||||||||    
T  32833719 ttcattcaattaatgatgtatgtagttcataatatggaccacatacatcattaattgaat 32833778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 40760872 - 40760813
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||| |||||||| |  |||||||||| ||||||||| || |||||||||||    
T  40760872 ttcatttaattattgatgtatgtgatccataatatgaactacatacattattaattgaat 40760813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 42595839 - 42595784
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaat 180  Q
    ||||||| |||||||||||||| | ||||||| ||||||| ||||| |||||||||    
T  42595839 attcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaat 42595784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 44435275 - 44435216
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  44435275 ttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 44435216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 46967474 - 46967549
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaa 179  Q
    |||||||| || || |||| |||||||| | |||||||||||| ||||||||| ||| ||| ||||| ||||||||    
T  46967474 taagtaaaatttattttttatattcattcatttaatgatgtatgtagtccatattatgaaccacatacatcattaa 46967549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 51760270 - 51760211
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| | || |||||||| ||  ||||| ||||||||||||||    
T  51760270 ttcatttaattaatgatgtatgtggttcataatatgaatcacatacatcattaattgaat 51760211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 54680590 - 54680531
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| ||||||||| ||| ||  ||||| ||||||||||||||    
T  54680590 ttcattcaattaatgatgtatgtagtccatattatgaatcacatacatcattaattgaat 54680531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 23005106 - 23005057
Alignment:
Q  136 taatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||| || |||| ||||||  ||||||||||||||||||||    
T  23005106 taatgatgtatatggttcatattataaatcacatatatcattaattgaat 23005057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 29676307 - 29676254
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaa 179  Q
    |||||||| |||||||||||| ||||||||| ||||||  ||||| ||||||||    
T  29676307 ttcatttatttaatgatgtatgtagtccatattataaataacatagatcattaa 29676254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 14626730 - 14626670
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | || |||||||| ||| ||||| |||||||| |||||    
T  14626730 attcattcaattaatgatgtatgtggttcataatatgaaccacatacatcattaaatgaat 14626670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 34205665 - 34205605
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| | ||||||| ||| ||  ||||  ||||||||||||||    
T  34205665 attcatttaattaatgatgtatgtggtccatattatgaatcacatgcatcattaattgaat 34205605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 40504076 - 40504164
Alignment:
Q  97 tcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| ||||||||||| || |||    |||||| |||||||||||||| |  |||||||||||||  ||||| || |||||||||||    
T  40504076 tcaattataagtaaatttgatttttaaggttcattcaattaatgatgtatgtgatccataatataaatcacatacattattaattgaat 40504164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 51204521 - 51204577
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||||||||||||||||||||| |  |||||| ||| ||| ||||| ||||||||||    
T  51204521 attcatttaattaatgatgtatgtgatccatattatgaaccacatacatcattaatt 51204577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 51859185 - 51859133
Alignment:
Q  90 tccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgat 142  Q
    |||||||  |||| |||| ||||||||| ||||||||||||| ||||||||||    
T  51859185 tccattgctaattataagcaaatttaattttttttattcattcaattaatgat 51859133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 52638135 - 52638075
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | ||| ||||||||||  ||||| || |||||||||||    
T  52638135 attcattcaattaatgatgtatgtggtcgataatataaatcacatacattattaattgaat 52638075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 14071 - 14131
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||||| ||| ||| ||||||||||||| ||||||||||||||    
T  14071 attcattcaattaatgatgtatatggtctatattataaactacatagatcattaattgaat 14131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 24733132 - 24733212
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaa 184  Q
    |||| ||||||||| ||||   |||||| ||||||||||||| || ||| ||||||||||| |||||||||||||||||||    
T  24733132 taagcaaatttaattttttaggttcattcaattaatgatgtaaatggtctataatataaaccacatatatcattaattgaa 24733212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 19531992 - 19532051
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  19531992 ttcattcaattaatgatgtatgtggtccatattataaactacatacatcattaattgaat 19532051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 46221179 - 46221120
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  46221179 ttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 46221120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 46578366 - 46578307
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| |||| |||||||||||| ||||| ||||||||||||||    
T  46578366 ttcattcaattaatgatgtatgtagttcataatataaaccacatacatcattaattgaat 46578307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 11032404 - 11032339
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaatat 191  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| |||||||||||||| |||||    
T  11032404 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaatat 11032339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 27942363 - 27942423
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| ||||||||||||||||  |||||| ||||||| ||||| ||||||||||||||    
T  27942363 attcattcaattaatgatgtatatgatccatattataaaccacatacatcattaattgaat 27942423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 3498395 - 3498336
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  3498395 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 3498336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 9504024 - 9503941
Alignment:
Q  99 aattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 182  Q
    |||| |||| ||||||||  ||||  |||||||||||||||||||||| | ||  ||||||| ||||||||| |||||||||||    
T  9504024 aattataagcaaatttaactttttagattcatttaattaatgatgtatgtggtatataatatgaactacatacatcattaattg 9503941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 37066283 - 37066224
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | |||||||||||| || ||||| ||||||||||||||    
T  37066283 ttcattcaattaatgatgtatgtggtccataatatagaccacatacatcattaattgaat 37066224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 46477234 - 46477175
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  46477234 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 46477175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 12171754 - 12171705
Alignment:
Q  132 taattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||||||||||||||||  |||||| ||||||||||||| ||||||||||    
T  12171754 taattaatgatgtatatgatccatattataaactacatacatcattaatt 12171705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 33471613 - 33471532
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| || ||||   |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  33471613 taagtaaattttattttttaggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 33471532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 35593658 - 35593739
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| || ||||  ||| ||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  35593658 taagtaaattttattttttagatttattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 35593739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 12307855 - 12307915
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||| |||||||||||| || |||||||||| ||| ||||| |||||||| |||||    
T  12307855 attcatttatttaatgatgtatgtaatccataatatgaaccacatacatcattaaatgaat 12307915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 45833292 - 45833232
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||  ||||||||| ||| ||| ||||| ||||||||||||||    
T  45833292 attcattcaattaatgatgtacgtagtccatattatgaaccacatacatcattaattgaat 45833232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 47778531 - 47778471
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| ||||| ||||||||||  ||||| || |||||||||||    
T  47778531 attcattcaattaatgatgtatgtagtcgataatataaatcacatacattattaattgaat 47778471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 24166364 - 24166305
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| || ||||||||||| |  |||||||||| ||| ||||||||||||||||||||    
T  24166364 ttcattcaactaatgatgtatgtgatccataatatgaaccacatatatcattaattgaat 24166305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 48590624 - 48590683
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||  ||||| ||||||||||||||    
T  48590624 ttcattaaattaatgatgtatgtggtccataatatgaatcacatacatcattaattgaat 48590683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 29205340 - 29205373
Alignment:
Q  115 aatattttttattcatttaattaatgatgtatat 148  Q
    ||||||||||||||||| ||||||||||||||||    
T  29205340 aatattttttattcattaaattaatgatgtatat 29205373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 31758606 - 31758525
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| || ||||   || |||||||||||||||||| |  | |||||||||||  |||||||| |||||||||||    
T  31758606 taagtaaattttattttttaagtttatttaattaatgatgtatgtgattcataatataaatcacatatattattaattgaat 31758525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 33471507 - 33471588
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| |||||| || ||||  ||||||| |||||||||||||| | || |||| |||| || ||||| ||||||||||||||    
T  33471507 taagcaaattttattttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaat 33471588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 35593764 - 35593683
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| |||||| |||||||   |||||| |||||||||||||| | || ||||||||  || ||||| ||||||||||||||    
T  35593764 taagcaaattttatattttaggttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaat 35593683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 6250702 - 6250642
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| ||||||||||  |||  |||||||| || |||||||||||| |||||||    
T  6250702 attcatttaataaatgatgtatgcagtatataatatagaccacatatatcatttattgaat 6250642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 21387678 - 21387618
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| |||||||||| | ||  |||||| | |||||||| ||||||||||||||    
T  21387678 attcatttaataaatgatgtatgtggtatataataaagactacatacatcattaattgaat 21387618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 31319606 - 31319558
Alignment:
Q  137 aatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||| ||||| |||||| | || ||||||||||||||||||||    
T  31319606 aatgatgtatgtagtctataataaagaccacatatatcattaattgaat 31319558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 32490627 - 32490687
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| | ||| |||||| | |||| ||| ||||||||| ||||    
T  32490627 attcatttaattaatgatgtatgttgtctataataaagactatatacatcattaatggaat 32490687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 39024165 - 39024105
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| | ||||||||||| |||||||||| ||||||| ||||| ||||| || |||||    
T  39024165 attcattcatttaatgatgtacatagtccatattataaacaacatacatcatcaaatgaat 39024105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 39970259 - 39970199
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| ||| |||||||||| | ||| ||||||||||| ||||| |||||| |||||||    
T  39970259 attcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaat 39970199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 46578303 - 46578363
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | ||  ||| ||| ||||||||| ||||||||||||||    
T  46578303 attcattcaattaatgatgtatgtggtttatattatgaactacatacatcattaattgaat 46578363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 46658834 - 46658774
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| |  |||||| ||| || |||||| ||||||||||||||    
T  46658834 attcattcaattaatgatgtatgtgttccatattatgaattacatacatcattaattgaat 46658774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 48392904 - 48392964
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||| |||||||| |  | ||||||||| || ||||| ||||||||||||||    
T  48392904 attcatttaattagtgatgtatgtgattcataatatataccacatacatcattaattgaat 48392964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 6169848 - 6169908
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||    
T  6169848 attcatttaattaatgatgtatgtagtcaataatattaaccacatacatcattaattgaat 6169908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 50998405 - 50998346
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||||||||||||||||| ||| | ||| ||||||||||||||    
T  50998405 ttcattcaattaatgatgtatatagtccataatatgaaccaaatacatcattaattgaat 50998346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 52253661 - 52253574
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaatat 191  Q
    ||||||||||| || ||||  ||||||| ||||||||||| || ||||||||| ||||||  ||||| |||||||||||||| |||||    
T  52253661 taagtaaattttattttttaaattcattcaattaatgatgcatgtagtccatattataaatcacatacatcattaattgaatgaatat 52253574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 26453103 - 26453030
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcatt 177  Q
    |||| |||| |||| ||||  ||||||| |||||||||||||||| ||||||||||| ||| ||||||||||||    
T  26453103 taagcaaatgtaattttttagattcattcaattaatgatgtatatggtccataatatgaaccacatatatcatt 26453030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 12062295 - 12062236
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||||||||||||||||||    
T  12062295 ttcattgaattaatgatgtatgtggtccatattatgaaccacatatatcattaattgaat 12062236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 21852538 - 21852479
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| |  |||||||||| ||| ||||||||||||||||||||    
T  21852538 ttcattcaattaatgatgtatgtgatccataatatgaaccacatatatcattaattgaat 21852479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 24023466 - 24023407
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||||  || |||||||| ||| || |||||||||||||||||    
T  24023466 ttcatttaattaatgatgtatacggttcataatatgaaccacgtatatcattaattgaat 24023407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 24478766 - 24478707
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||||| | ||  |||||||| || ||||||||||||||||||||    
T  24478766 ttcatttaattaatgatgtatgtggtttataatatagaccacatatatcattaattgaat 24478707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 47293180 - 47293242
Alignment:
Q  83 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgta 145  Q
    |||| ||||| ||| ||||| |||||||||||||| ||||  |||||||||||||||||||||    
T  47293180 tactccctccgttgccaattataagtaaatttaattttttagattcatttaattaatgatgta 47293242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 38824308 - 38824389
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| |||||| || |||| | |||||| |||||||||||||| | || ||||||||| || ||||| ||||||||||||||    
T  38824308 taagcaaattttattttttatgttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaattgaat 38824389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 39216206 - 39216145
Alignment:
Q  124 tattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||| ||||||||||||||||||||  || |||| || ||||| ||||||||||||||    
T  39216206 tattcattcaattaatgatgtatatagtctttattatagacaacatacatcattaattgaat 39216145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 45239008 - 45239089
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| |  ||||  ||||||||||| |||||||||| | || ||||||||| || ||||| ||||||||||||||    
T  45239008 taagtaaattttactttttagattcatttaatcaatgatgtatgtggttcataatatagaccacatacatcattaattgaat 45239089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 12993618 - 12993566
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  12993618 aattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 12993566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 17622809 - 17622857
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    ||||||||||||||||| |||||||||| ||||||||  ||||||||||    
T  17622809 aattaatgatgtatataatccataatatgaactacatgcatcattaatt 17622857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 21909887 - 21909939
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||| ||| ||||||||| ||||||||||||||    
T  21909887 aattaatgatgtatgtggtccatattatgaactacatacatcattaattgaat 21909939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 23079449 - 23079398
Alignment:
Q  129 atttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||||||||||||||||| | ||||||||||||||||| ||| ||||||||||    
T  23079449 atttaattaatgatgtatgt-gtccataatataaactaaatacatcattaatt 23079398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 33738209 - 33738261
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  33738209 aattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 33738261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 37255164 - 37255224
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  37255164 attcattcaattaatgatgtatgtggtccatattattaaccacatacatcattaattgaat 37255224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 1252232 - 1252173
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||  | ||||||||||| ||| ||||| ||||||||||||||    
T  1252232 ttcattcaattaatgatgtacgtggtccataatatgaaccacatacatcattaattgaat 1252173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 4683038 - 4682979
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  4683038 ttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 4682979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 15311511 - 15311570
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| | |||||||||||| | ||||||| ||||||||||||| |||||||| |||||    
T  15311511 ttcattcatttaatgatgtatgtggtccatattataaactacatacatcattaaatgaat 15311570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 17310457 - 17310516
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||||| ||| |||||| |||  | ||||||||||||||||||    
T  17310457 ttcattcaattaatgatgtatatggtctataatacaaatcatatatatcattaattgaat 17310516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 27549084 - 27549143
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  27549084 ttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 27549143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 31909788 - 31909847
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||| ||| ||||||| ||||| ||||||||||||||    
T  31909788 ttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaat 31909847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 40341769 - 40341824
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||||| |||||||||||||| ||||||||  ||||||| ||||| ||||||||||    
T  40341769 ttcattcaattaatgatgtatgtagtccatgttataaaccacatacatcattaatt 40341824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 148
Target Start/End: Complemental strand, 43738719 - 43738684
Alignment:
Q  113 ttaatattttttattcatttaattaatgatgtatat 148  Q
    |||||||||| |||||||||||||||||||||||||    
T  43738719 ttaatattttatattcatttaattaatgatgtatat 43738684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 48605109 - 48605168
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||  ||||| ||||||||||||||    
T  48605109 ttcattcaattaatgatgtatgtggtccataatatgaatcacatacatcattaattgaat 48605168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 1358213 - 1358270
Alignment:
Q  128 catttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||||||| | ||||||| ||| ||| ||||| ||||||| ||||||    
T  1358213 catttaattaatgatgtatgtggtccatattatgaaccacatacatcattagttgaat 1358270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 5852779 - 5852730
Alignment:
Q  136 taatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  5852779 taatgatgtatgtggtccatattataaaccacatacatcattaattgaat 5852730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 6763383 - 6763432
Alignment:
Q  136 taatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  6763383 taatgatgtatttggtccatattataaaccacatacatcattaattgaat 6763432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 46517994 - 46518043
Alignment:
Q  136 taatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  46517994 taatgatgtatgtggtccatattataaaccacatacatcattaattgaat 46518043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 47293345 - 47293292
Alignment:
Q  132 taattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||||||||||| |  |||||||||| ||| ||||| ||||||||||||||    
T  47293345 taattaatgatgtatgtgatccataatatgaaccacatacatcattaattgaat 47293292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 52879987 - 52879926
Alignment:
Q  124 tattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||| |||||||||||||| | |||||||||||   | ||||| ||||||||||||||    
T  52879987 tattcattcaattaatgatgtatgtggtccataatatggtccacatacatcattaattgaat 52879926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 6758584 - 6758644
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| ||||||||||||||||||||  || |||| || || || ||||||||||||||    
T  6758584 attcattcaattaatgatgtatatagtctttattatagacaacgtacatcattaattgaat 6758644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 12447556 - 12447496
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| |  |||||||||| ||| ||| | ||||||||||||||    
T  12447556 attcattcaattaatgatgtatgtgatccataatatgaaccacaaacatcattaattgaat 12447496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 21909935 - 21909883
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| |||| ||||||||  || ||||| ||||||||||||||    
T  21909935 aattaatgatgtatgtagttcataatatggaccacatacatcattaattgaat 21909883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 26423526 - 26423470
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||||||||||||||||||||| | || |||| | ||||| ||||| ||||||||||    
T  26423526 attcatttaattaatgatgtatgtggttcatattgtaaaccacatacatcattaatt 26423470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 34598992 - 34598904
Alignment:
Q  97 tcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| ||||||||||| |  ||||  ||||||| ||||||||||||||||  | |||| ||| ||| ||||| ||||||| ||||||    
T  34598992 tcaattataagtaaatttgactttttagattcattcaattaatgatgtatatgattcatattatgaaccacatacatcattatttgaat 34598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 38824393 - 38824333
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | ||| ||| ||| ||| ||||| ||||||||||||||    
T  38824393 attcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattaattgaat 38824333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 39216143 - 39216207
Alignment:
Q  127 tcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaatat 191  Q
    ||||| |||||||||||||| | ||| |||||| | |||| ||| |||||||||||||| |||||    
T  39216143 tcattcaattaatgatgtatgttgtctataataaagactatatacatcattaattgaatgaatat 39216207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 40341832 - 40341772
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||||||||||| | ||  |||| ||  |||||||| ||||||||||||||    
T  40341832 attcatttaattaatgatgtatgtggtttataacatggactacatacatcattaattgaat 40341772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 41154950 - 41155002
Alignment:
Q  129 atttaattaatgatgtatatagtccataatataaactacatatatcattaatt 181  Q
    |||||||||||||| |||||| ||||||||||| |   |||||||||||||||    
T  41154950 atttaattaatgatatatataatccataatatagatcgcatatatcattaatt 41155002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 42140371 - 42140428
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||||| ||| |||||||  || ||||| ||||||||||||||    
T  42140371 ttcattcaattaatgatgtatatggtctataatat--accacatacatcattaattgaat 42140428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 667829 - 667770
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||||||||| ||||||||| ||||    
T  667829 ttcattcaattaatgatgtatgtggtccataatatgaactacatacatcattaatggaat 667770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 32786217 - 32786158
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  32786217 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 32786158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 31577435 - 31577537
Alignment:
Q  83 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 182  Q
    |||||||| |||| | || | |||| |||||| || ||||  ||||||| ||||||| |||||| || |||||| ||| ||||||||| |||||||||||    
T  31577435 tacttccttcattttaaaatataagcaaattttattttttagattcattcaattaattatgtatgtaatccatattatgaactacatacatcattaattg 31577534  T
Q  183 aat 185  Q
    |||    
T  31577535 aat 31577537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 3212335 - 3212283
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||||||||||  ||||| ||||||||||||||    
T  3212335 aattaatgatgtatgtggtccataatataaatcacatacatcattaattgaat 3212283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 14804264 - 14804207
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||||  ||||||| ||||||| ||||| ||||||||||||||    
T  14804264 ttcattcaattaatgatgtata--gtccatattataaaccacatacatcattaattgaat 14804207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 29938388 - 29938448
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| | |||||||||||| | ||||||||||| ||||||||| |||||||| |||||    
T  29938388 attcattcatttaatgatgtatgtggtccataatatgaactacatacatcattaaatgaat 29938448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 3343816 - 3343875
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| |||| |||||||||    
T  3343816 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcaataattgaat 3343875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 3418795 - 3418854
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||||| || |||||||| ||| ||||| || |||||||||||    
T  3418795 ttcattcaattaatgatgtatatggttcataatatgaaccacatacattattaattgaat 3418854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 21478654 - 21478595
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  21478654 ttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 21478595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 31759425 - 31759366
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||||||| |||  |||| ||||||||||||||    
T  31759425 ttcattcaattaatgatgtatgtggtccataatatgaaccgcatacatcattaattgaat 31759366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 6047994 - 6048054
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| |   ||||||||| ||| ||||| ||||||||||||||    
T  6047994 attcattcaattaatgatgtatgtgacccataatatgaaccacatacatcattaattgaat 6048054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 21478591 - 21478651
Alignment:
Q  125 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||||||||||||| | || |||| |||| || ||||| ||||||||||||||    
T  21478591 attcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaat 21478651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 33169276 - 33169224
Alignment:
Q  133 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||||||||||| | ||||||| ||||||| ||||| || |||||||||||    
T  33169276 aattaatgatgtatgtggtccatattataaaccacatacattattaattgaat 33169224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 5511 - 5430
Alignment:
Q  104 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||| |||||| | |||||  |||||||||||||||||||||| | ||  |||||||| || ||||| ||||||||||||||    
T  5511 taagaaaattttacattttagattcatttaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaat 5430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 58301 - 58398
Alignment:
Q  88 cctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||| ||| ||||| |||| ||||||||  ||||   |||||| ||| |||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  58301 cctccgttgccaattataagcaaatttaactttttaagttcattcaatcaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 58398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 11623 - 11682
Alignment:
Q  126 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    |||||| |||||||||||||| | ||||||| |||| || ||||| ||||||||||||||    
T  11623 ttcattcaattaatgatgtatgtggtccatattatagaccacatacatcattaattgaat 11682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 54641 - 54731
Alignment:
Q  94 ttgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaa 184  Q
    ||||||||| ||| |||||||||| |||| | ||| || |||||||||||||| | ||||| ||||| ||| | ||| || ||||||||||    
T  54641 ttgtcaattataaataaatttaattttttatgttcgttcaattaatgatgtatgtggtccacaatatgaaccatatacattattaattgaa 54731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 44642 - 44698
Alignment:
Q  129 atttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 185  Q
    ||||||| |||| ||||| ||||||||| |||| || |||||||||||| |||||||    
T  44642 atttaataaatggtgtatgtagtccatattatagacgacatatatcatttattgaat 44698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University