View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16727_high_35 (Length: 243)

Name: NF16727_high_35
Description: NF16727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16727_high_35
NF16727_high_35
[»] chr1 (62 HSPs)
chr1 (16-140)||(37447844-37447968)
chr1 (16-138)||(44570687-44570809)
chr1 (20-142)||(6470632-6470754)
chr1 (16-109)||(41823102-41823195)
chr1 (147-232)||(25150462-25150549)
chr1 (16-142)||(8224773-8224899)
chr1 (13-138)||(37448341-37448465)
chr1 (16-108)||(39887166-39887258)
chr1 (16-142)||(28632528-28632653)
chr1 (16-142)||(31166315-31166441)
chr1 (16-142)||(37036891-37037017)
chr1 (16-142)||(49659222-49659347)
chr1 (16-145)||(31195458-31195587)
chr1 (16-109)||(37447301-37447394)
chr1 (16-109)||(41822485-41822578)
chr1 (16-109)||(44571239-44571332)
chr1 (16-115)||(15467905-15468004)
chr1 (16-142)||(32287874-32288001)
chr1 (16-109)||(41822639-41822733)
chr1 (16-109)||(48953607-48953699)
chr1 (16-115)||(47820245-47820344)
chr1 (16-139)||(32647309-32647432)
chr1 (60-142)||(26501065-26501147)
chr1 (16-142)||(51847857-51847982)
chr1 (20-129)||(946931-947040)
chr1 (16-109)||(32128068-32128161)
chr1 (17-142)||(43622921-43623046)
chr1 (16-109)||(49216280-49216373)
chr1 (16-109)||(52135567-52135660)
chr1 (16-115)||(946407-946505)
chr1 (60-142)||(24273206-24273288)
chr1 (16-109)||(42230758-42230852)
chr1 (16-106)||(50471791-50471881)
chr1 (20-97)||(34003511-34003588)
chr1 (63-146)||(34756428-34756511)
chr1 (16-115)||(35491189-35491288)
chr1 (59-142)||(47165197-47165280)
chr1 (9-114)||(10166532-10166636)
chr1 (16-105)||(13181630-13181719)
chr1 (63-142)||(15034664-15034743)
chr1 (72-142)||(15034743-15034813)
chr1 (72-142)||(23536072-23536142)
chr1 (20-110)||(34003414-34003504)
chr1 (73-142)||(38277420-38277489)
chr1 (63-142)||(4038150-4038229)
chr1 (63-142)||(50005084-50005163)
chr1 (19-105)||(21267756-21267841)
chr1 (72-142)||(27935569-27935639)
chr1 (16-105)||(32201811-32201900)
chr1 (72-142)||(45565399-45565469)
chr1 (72-142)||(50005163-50005233)
chr1 (9-84)||(23956297-23956372)
chr1 (63-142)||(27804340-27804419)
chr1 (76-142)||(4038080-4038146)
chr1 (72-142)||(27804270-27804340)
chr1 (72-142)||(30190220-30190290)
chr1 (72-142)||(40264114-40264184)
chr1 (26-65)||(16325122-16325161)
chr1 (16-69)||(1902139-1902192)
chr1 (77-142)||(38277504-38277568)
chr1 (63-115)||(5474474-5474526)
chr1 (90-138)||(32573024-32573072)
[»] chr3 (59 HSPs)
chr3 (16-142)||(7302351-7302477)
chr3 (16-142)||(47767437-47767563)
chr3 (16-142)||(37054399-37054525)
chr3 (16-142)||(42005894-42006020)
chr3 (16-129)||(30766571-30766684)
chr3 (9-142)||(21307466-21307599)
chr3 (16-157)||(53129784-53129925)
chr3 (16-115)||(7976580-7976679)
chr3 (16-142)||(34088576-34088702)
chr3 (16-142)||(36397930-36398056)
chr3 (16-142)||(48947610-48947736)
chr3 (16-156)||(671560-671700)
chr3 (16-156)||(53470370-53470510)
chr3 (16-115)||(46706682-46706783)
chr3 (16-142)||(52527041-52527167)
chr3 (16-109)||(2104772-2104865)
chr3 (16-109)||(38506817-38506910)
chr3 (16-139)||(30767112-30767236)
chr3 (9-105)||(47284137-47284233)
chr3 (16-109)||(26323394-26323487)
chr3 (16-104)||(43863892-43863979)
chr3 (20-113)||(21730936-21731028)
chr3 (16-98)||(31021728-31021811)
chr3 (60-139)||(19475824-19475903)
chr3 (16-79)||(35279863-35279926)
chr3 (72-142)||(44692906-44692976)
chr3 (72-142)||(46672800-46672870)
chr3 (16-114)||(47336914-47337012)
chr3 (16-69)||(26547093-26547146)
chr3 (16-109)||(55460378-55460471)
chr3 (18-114)||(50168553-50168649)
chr3 (63-142)||(5415858-5415937)
chr3 (19-97)||(6837003-6837081)
chr3 (72-142)||(9129428-9129498)
chr3 (72-142)||(9137535-9137605)
chr3 (72-142)||(27251978-27252048)
chr3 (16-114)||(31189338-31189436)
chr3 (16-141)||(44288400-44288525)
chr3 (63-139)||(31070415-31070490)
chr3 (60-119)||(8762154-8762213)
chr3 (50-109)||(9007430-9007489)
chr3 (76-142)||(5415788-5415854)
chr3 (72-142)||(46429480-46429550)
chr3 (72-142)||(49457348-49457418)
chr3 (72-141)||(28092220-28092289)
chr3 (16-98)||(34396451-34396530)
chr3 (63-142)||(9129349-9129428)
chr3 (63-142)||(9137456-9137535)
chr3 (63-142)||(44436263-44436342)
chr3 (63-142)||(44692827-44692906)
chr3 (16-54)||(32665978-32666016)
chr3 (19-53)||(36635976-36636010)
chr3 (72-142)||(39110399-39110469)
chr3 (72-114)||(44436342-44436384)
chr3 (60-109)||(54761549-54761598)
chr3 (10-54)||(1796165-1796209)
chr3 (17-45)||(28182187-28182215)
chr3 (71-139)||(37321558-37321626)
chr3 (16-52)||(46199239-46199275)
[»] chr8 (47 HSPs)
chr8 (16-142)||(24044965-24045091)
chr8 (16-142)||(28324614-28324740)
chr8 (9-109)||(26520384-26520484)
chr8 (16-142)||(29257303-29257429)
chr8 (16-142)||(29482759-29482885)
chr8 (16-142)||(44346630-44346756)
chr8 (16-142)||(44889359-44889485)
chr8 (16-142)||(33377249-33377375)
chr8 (16-109)||(34008819-34008912)
chr8 (16-142)||(14244-14369)
chr8 (16-114)||(13144616-13144714)
chr8 (16-129)||(8049272-8049385)
chr8 (16-142)||(35978959-35979082)
chr8 (16-142)||(1088229-1088355)
chr8 (16-114)||(9982669-9982767)
chr8 (16-114)||(33986037-33986135)
chr8 (9-114)||(31976527-31976632)
chr8 (16-104)||(6416227-6416315)
chr8 (16-106)||(43167678-43167768)
chr8 (16-109)||(24510229-24510322)
chr8 (32-109)||(29611408-29611485)
chr8 (16-84)||(34388570-34388638)
chr8 (16-114)||(31980435-31980533)
chr8 (16-114)||(35404694-35404792)
chr8 (16-105)||(36625177-36625266)
chr8 (60-142)||(23011739-23011821)
chr8 (60-142)||(36103106-36103188)
chr8 (16-78)||(40734053-40734115)
chr8 (63-142)||(3853621-3853700)
chr8 (63-142)||(3858079-3858158)
chr8 (16-119)||(15186769-15186872)
chr8 (63-142)||(17110944-17111023)
chr8 (60-142)||(515528-515610)
chr8 (16-109)||(8469535-8469628)
chr8 (60-109)||(30444929-30444978)
chr8 (90-142)||(33902672-33902724)
chr8 (74-142)||(40046809-40046877)
chr8 (63-142)||(4156242-4156321)
chr8 (9-84)||(7079393-7079468)
chr8 (72-142)||(17110874-17110944)
chr8 (72-142)||(42711364-42711434)
chr8 (73-142)||(14800045-14800114)
chr8 (63-142)||(11744718-11744797)
chr8 (72-142)||(13404832-13404902)
chr8 (20-69)||(10593149-10593198)
chr8 (41-142)||(28190680-28190780)
chr8 (73-129)||(13404912-13404968)
[»] chr5 (65 HSPs)
chr5 (16-142)||(22303809-22303935)
chr5 (9-142)||(32250030-32250162)
chr5 (16-142)||(9894261-9894387)
chr5 (16-142)||(41762154-41762280)
chr5 (16-142)||(14834829-14834955)
chr5 (16-109)||(17542300-17542393)
chr5 (16-109)||(33146211-33146304)
chr5 (16-109)||(37241049-37241142)
chr5 (16-142)||(927307-927432)
chr5 (9-109)||(15270786-15270886)
chr5 (9-109)||(22305132-22305232)
chr5 (18-142)||(22766957-22767081)
chr5 (17-97)||(28489513-28489593)
chr5 (24-108)||(28490031-28490115)
chr5 (16-115)||(35111258-35111357)
chr5 (16-114)||(12479940-12480038)
chr5 (60-142)||(37722877-37722959)
chr5 (44-142)||(40090381-40090479)
chr5 (16-141)||(10314655-10314780)
chr5 (16-108)||(17492587-17492679)
chr5 (16-115)||(37241537-37241640)
chr5 (16-111)||(22302557-22302653)
chr5 (60-142)||(19533890-19533972)
chr5 (16-142)||(35379349-35379473)
chr5 (16-109)||(34105109-34105202)
chr5 (16-115)||(30519036-30519134)
chr5 (16-115)||(30559376-30559474)
chr5 (60-142)||(25935273-25935355)
chr5 (19-103)||(31316205-31316289)
chr5 (63-142)||(20523208-20523287)
chr5 (76-142)||(9764426-9764492)
chr5 (72-142)||(15373965-15374035)
chr5 (74-142)||(2721557-2721625)
chr5 (16-111)||(6772152-6772245)
chr5 (9-69)||(8264586-8264646)
chr5 (60-140)||(37145484-37145564)
chr5 (63-142)||(6634089-6634168)
chr5 (63-142)||(9764343-9764422)
chr5 (16-119)||(17493104-17493207)
chr5 (36-110)||(11601076-11601150)
chr5 (63-142)||(15374035-15374114)
chr5 (72-142)||(3563282-3563352)
chr5 (43-141)||(8255033-8255130)
chr5 (72-142)||(15804327-15804397)
chr5 (72-142)||(23091968-23092037)
chr5 (72-142)||(26281264-26281334)
chr5 (33-147)||(37090281-37090395)
chr5 (72-142)||(40809346-40809416)
chr5 (90-139)||(32470890-32470939)
chr5 (72-128)||(32390056-32390112)
chr5 (90-142)||(40643919-40643971)
chr5 (16-59)||(40089756-40089799)
chr5 (72-142)||(2316463-2316532)
chr5 (16-54)||(11409274-11409312)
chr5 (22-84)||(12991276-12991338)
chr5 (22-84)||(13064899-13064961)
chr5 (72-142)||(16515010-16515079)
chr5 (16-69)||(17444369-17444423)
chr5 (60-142)||(20320631-20320713)
chr5 (72-142)||(20523138-20523208)
chr5 (92-142)||(28828372-28828422)
chr5 (72-142)||(28828431-28828501)
chr5 (60-109)||(12064451-12064500)
chr5 (90-142)||(2316383-2316435)
chr5 (90-142)||(6634020-6634072)
[»] chr2 (51 HSPs)
chr2 (16-139)||(30698289-30698412)
chr2 (16-142)||(7227954-7228080)
chr2 (16-115)||(7167609-7167708)
chr2 (16-142)||(769041-769167)
chr2 (16-142)||(1583751-1583877)
chr2 (16-142)||(33189199-33189325)
chr2 (16-142)||(11141310-11141436)
chr2 (16-109)||(8736383-8736476)
chr2 (20-142)||(17905659-17905780)
chr2 (16-142)||(28740601-28740727)
chr2 (16-153)||(3092274-3092413)
chr2 (16-115)||(32839590-32839689)
chr2 (20-142)||(13017784-13017906)
chr2 (16-109)||(20935744-20935837)
chr2 (16-109)||(32840134-32840227)
chr2 (16-109)||(41585632-41585725)
chr2 (16-115)||(7309705-7309804)
chr2 (16-107)||(44255674-44255765)
chr2 (16-98)||(7611830-7611912)
chr2 (16-114)||(11036375-11036473)
chr2 (60-142)||(11532239-11532321)
chr2 (16-142)||(35047621-35047747)
chr2 (16-142)||(39630230-39630355)
chr2 (16-142)||(45094413-45094539)
chr2 (60-142)||(11793900-11793982)
chr2 (16-98)||(6749206-6749288)
chr2 (19-141)||(40026070-40026192)
chr2 (16-109)||(21504488-21504581)
chr2 (16-147)||(740704-740835)
chr2 (63-142)||(27033495-27033574)
chr2 (19-105)||(1730095-1730180)
chr2 (60-142)||(10480124-10480206)
chr2 (18-109)||(44205602-44205693)
chr2 (72-142)||(11716413-11716483)
chr2 (72-142)||(14365705-14365775)
chr2 (16-97)||(12263476-12263557)
chr2 (63-142)||(784868-784947)
chr2 (63-142)||(41461590-41461669)
chr2 (72-142)||(14537204-14537274)
chr2 (90-142)||(14365801-14365853)
chr2 (56-115)||(11594840-11594899)
chr2 (64-111)||(11607257-11607304)
chr2 (72-142)||(784798-784868)
chr2 (20-69)||(14306753-14306802)
chr2 (90-142)||(11684604-11684656)
chr2 (19-142)||(2274734-2274856)
chr2 (64-111)||(11595355-11595402)
chr2 (56-115)||(11606745-11606804)
chr2 (72-142)||(17180302-17180372)
chr2 (72-142)||(44256191-44256260)
chr2 (90-139)||(11716501-11716550)
[»] scaffold0169 (1 HSPs)
scaffold0169 (16-142)||(4080-4206)
[»] scaffold0318 (1 HSPs)
scaffold0318 (20-142)||(2872-2993)
[»] chr4 (61 HSPs)
chr4 (16-142)||(2125862-2125988)
chr4 (16-115)||(29091169-29091268)
chr4 (16-142)||(35470127-35470253)
chr4 (16-110)||(46242486-46242580)
chr4 (34-139)||(1539649-1539754)
chr4 (16-109)||(53760732-53760825)
chr4 (16-109)||(56339171-56339264)
chr4 (9-109)||(40338187-40338287)
chr4 (16-142)||(16516176-16516303)
chr4 (16-114)||(41139506-41139604)
chr4 (16-109)||(42775643-42775736)
chr4 (16-142)||(42776642-42776768)
chr4 (16-109)||(17727103-17727196)
chr4 (16-115)||(26534525-26534624)
chr4 (16-97)||(27284604-27284685)
chr4 (16-112)||(31947628-31947722)
chr4 (24-109)||(40548168-40548253)
chr4 (73-142)||(41498575-41498644)
chr4 (9-109)||(46243032-46243130)
chr4 (16-114)||(10354375-10354473)
chr4 (60-142)||(10633037-10633119)
chr4 (16-109)||(52294987-52295080)
chr4 (16-80)||(42776185-42776249)
chr4 (71-142)||(4896715-4896786)
chr4 (20-139)||(19461682-19461801)
chr4 (60-142)||(31473854-31473936)
chr4 (63-139)||(10128049-10128125)
chr4 (16-115)||(16300160-16300260)
chr4 (63-143)||(28845875-28845955)
chr4 (72-142)||(49111396-49111466)
chr4 (16-114)||(52493958-52494054)
chr4 (16-69)||(4490105-4490158)
chr4 (16-69)||(13318601-13318654)
chr4 (73-142)||(14982285-14982354)
chr4 (74-142)||(11040973-11041040)
chr4 (63-135)||(42844555-42844627)
chr4 (63-142)||(7352817-7352896)
chr4 (63-142)||(15660258-15660337)
chr4 (63-142)||(36455912-36455991)
chr4 (72-142)||(857323-857393)
chr4 (72-142)||(10127979-10128049)
chr4 (20-66)||(24705432-24705478)
chr4 (72-142)||(36456010-36456080)
chr4 (16-109)||(54566210-54566306)
chr4 (73-142)||(1112610-1112679)
chr4 (90-147)||(4441337-4441394)
chr4 (16-69)||(47108358-47108411)
chr4 (63-139)||(1107127-1107203)
chr4 (90-142)||(4896653-4896705)
chr4 (16-84)||(56118572-56118640)
chr4 (72-115)||(1107084-1107127)
chr4 (76-142)||(5715749-5715815)
chr4 (72-142)||(7352896-7352966)
chr4 (16-78)||(24062840-24062902)
chr4 (72-142)||(28845955-28846025)
chr4 (100-142)||(31742876-31742918)
chr4 (72-141)||(1112706-1112775)
chr4 (11-68)||(30303800-30303857)
chr4 (63-115)||(857271-857323)
chr4 (90-142)||(15660188-15660240)
chr4 (90-142)||(31742781-31742833)
[»] chr7 (57 HSPs)
chr7 (16-147)||(9784859-9784990)
chr7 (16-142)||(28539096-28539222)
chr7 (31-142)||(18789189-18789300)
chr7 (16-142)||(23455175-23455301)
chr7 (16-142)||(23548539-23548665)
chr7 (16-142)||(39342570-39342696)
chr7 (16-142)||(14603190-14603316)
chr7 (16-142)||(35455809-35455935)
chr7 (24-145)||(43791094-43791213)
chr7 (16-142)||(30524260-30524386)
chr7 (16-109)||(13814922-13815015)
chr7 (16-109)||(30587831-30587924)
chr7 (16-109)||(32650611-32650704)
chr7 (16-109)||(40495755-40495848)
chr7 (16-109)||(45984378-45984471)
chr7 (16-109)||(45988738-45988831)
chr7 (20-110)||(3905591-3905681)
chr7 (16-142)||(25189154-25189280)
chr7 (16-142)||(30629062-30629188)
chr7 (31-119)||(18789545-18789633)
chr7 (16-142)||(15990896-15991022)
chr7 (16-98)||(40495279-40495361)
chr7 (16-109)||(26415991-26416084)
chr7 (16-109)||(30080729-30080822)
chr7 (16-109)||(14790151-14790244)
chr7 (16-109)||(19865482-19865575)
chr7 (16-109)||(40667379-40667472)
chr7 (16-115)||(22391516-22391614)
chr7 (60-142)||(6498737-6498819)
chr7 (60-142)||(26162109-26162191)
chr7 (16-98)||(42816598-42816680)
chr7 (63-142)||(31632727-31632806)
chr7 (63-142)||(5644682-5644761)
chr7 (63-142)||(29065824-29065903)
chr7 (60-142)||(35776927-35777009)
chr7 (16-111)||(36328724-36328821)
chr7 (72-142)||(40110822-40110892)
chr7 (16-112)||(33310839-33310935)
chr7 (76-142)||(2057400-2057466)
chr7 (72-142)||(40110742-40110812)
chr7 (16-66)||(41443028-41443078)
chr7 (16-78)||(18926749-18926811)
chr7 (63-141)||(21635960-21636038)
chr7 (88-142)||(29195714-29195768)
chr7 (60-142)||(29639187-29639269)
chr7 (72-142)||(43955522-43955592)
chr7 (72-142)||(43955598-43955668)
chr7 (72-142)||(44915200-44915270)
chr7 (73-142)||(2057480-2057549)
chr7 (21-142)||(34115580-34115701)
chr7 (63-115)||(46069423-46069475)
chr7 (20-54)||(25536821-25536855)
chr7 (72-142)||(29065903-29065973)
chr7 (73-114)||(6498669-6498710)
chr7 (78-142)||(34398938-34399003)
chr7 (20-69)||(45967025-45967074)
chr7 (63-115)||(49052860-49052912)
[»] scaffold0129 (2 HSPs)
scaffold0129 (20-142)||(19203-19324)
scaffold0129 (16-142)||(19727-19852)
[»] chr6 (27 HSPs)
chr6 (20-142)||(28918170-28918292)
chr6 (16-115)||(9697494-9697593)
chr6 (20-142)||(1368482-1368604)
chr6 (16-108)||(31412940-31413032)
chr6 (16-109)||(1195371-1195464)
chr6 (16-109)||(8475199-8475292)
chr6 (16-98)||(15616303-15616385)
chr6 (60-142)||(34244966-34245048)
chr6 (60-142)||(29889420-29889502)
chr6 (23-114)||(6358200-6358291)
chr6 (9-68)||(10105118-10105177)
chr6 (72-142)||(6919713-6919783)
chr6 (16-114)||(26901706-26901804)
chr6 (73-142)||(15299510-15299578)
chr6 (37-142)||(15832471-15832576)
chr6 (63-142)||(9285652-9285731)
chr6 (23-141)||(10737668-10737786)
chr6 (60-142)||(13487280-13487362)
chr6 (90-142)||(9763114-9763166)
chr6 (63-142)||(9763017-9763096)
chr6 (60-115)||(34364775-34364830)
chr6 (75-134)||(15299412-15299471)
chr6 (73-114)||(29889352-29889393)
chr6 (23-91)||(413623-413691)
chr6 (90-142)||(6919809-6919861)
chr6 (90-142)||(8574700-8574752)
chr6 (90-142)||(8574767-8574819)
[»] scaffold0301 (1 HSPs)
scaffold0301 (9-142)||(7156-7289)
[»] scaffold0400 (1 HSPs)
scaffold0400 (16-147)||(4440-4571)
[»] scaffold0365 (1 HSPs)
scaffold0365 (16-147)||(5084-5215)
[»] scaffold0337 (2 HSPs)
scaffold0337 (13-115)||(15805-15905)
scaffold0337 (16-96)||(16316-16396)
[»] scaffold0065 (2 HSPs)
scaffold0065 (13-115)||(2847-2947)
scaffold0065 (16-97)||(9528-9609)
[»] scaffold0047 (1 HSPs)
scaffold0047 (17-98)||(50250-50331)
[»] scaffold0039 (1 HSPs)
scaffold0039 (9-109)||(109069-109168)
[»] scaffold0014 (2 HSPs)
scaffold0014 (16-114)||(221138-221236)
scaffold0014 (16-80)||(223691-223755)
[»] scaffold0027 (2 HSPs)
scaffold0027 (60-147)||(10886-10973)
scaffold0027 (73-114)||(11283-11324)
[»] scaffold0009 (1 HSPs)
scaffold0009 (72-142)||(42002-42072)
[»] scaffold1562 (2 HSPs)
scaffold1562 (76-142)||(493-559)
scaffold1562 (90-142)||(410-462)
[»] scaffold1158 (2 HSPs)
scaffold1158 (76-142)||(2034-2100)
scaffold1158 (90-142)||(2131-2183)
[»] scaffold0417 (1 HSPs)
scaffold0417 (16-92)||(11898-11974)
[»] scaffold0044 (1 HSPs)
scaffold0044 (63-142)||(56349-56428)
[»] scaffold0048 (1 HSPs)
scaffold0048 (72-142)||(82948-83018)


Alignment Details
Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 37447844 - 37447968
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37447844 atacttcataaatttccatcattttgaaaattcttcaaactattatccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattc 37447943  T
Q  116 tctcgaaatattcctccatccaaac 140  Q
     ||| ||||||||| | ||||||||    
T  37447944 cctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 44570809 - 44570687
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44570809 atacttcataaatttccatcatttcgaaaattcttcaaactattatccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattc 44570710  T
Q  116 tctcgaaatattcctccatccaa 138  Q
     ||| ||| ||||  ||||||||    
T  44570709 cctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 6470632 - 6470754
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||| |||||||| | ||||||||||| ||||||||||||||||||||    
T  6470632 ttcataaatttccatcattttgaaaattcttcaaattattattcaaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctctc 6470731  T
Q  120 gaaatattcctccatccaaacac 142  Q
     ||| ||||| ||||||||||||    
T  6470732 aaaacattccgccatccaaacac 6470754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 41823102 - 41823195
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  41823102 atacttcataaatttccattattttgaaaattcttcaaactattatccaaacaatggaattcatctcaaggtatttgaattccttcaaaacatt 41823195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 25150462 - 25150549
Alignment:
Q  147 agagaaaatgaattgacaaaatccattcaccaaaaattacatcttgaaccgattcctcc--actacagtaggccacacagactttaat 232  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  25150462 agagaaaatgaattgacaaaatccattctccaaaaattacatcttgaaccgattcctccagactacagtaggccacacagactttaat 25150549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 8224899 - 8224773
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||| ||||||||| |||| |||||| |||||| ||||||||||||||||    
T  8224899 atacttcataaatttccatcattttgaaaattctttaaattatcatccaaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattc 8224800  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| |||||  |||||||||||    
T  8224799 cctcaaaacattccctcatccaaacac 8224773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 37448341 - 37448465
Alignment:
Q  13 aatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattaca 112  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||| |||||||||| ||||||||| |||| |||||| |||||| |||||||||||||    
T  37448341 aatatacttcataaatttccatcattttgaaaattctccaaattat-atccaaacaatggaattcacatcaaagtatttaaattccctcaaaacattaca 37448439  T
Q  113 ttctctcgaaatattcctccatccaa 138  Q
    ||||||| ||| |||||  |||||||    
T  37448440 ttctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 39887258 - 39887166
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||| |||||||||||    
T  39887258 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcacatcaaagtatttgaatttcttcaaaacat 39887166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 28632528 - 28632653
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||| |||||||||||||| ||| ||||||||  ||||||||||||||||    
T  28632528 atacttcataaattttcatcattttgaaaattctttaaattattatccaaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattc 28632626  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| |||||  |||||||||||    
T  28632627 cctccaaacattccctcatccaaacac 28632653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 31166441 - 31166315
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||  ||||||| |||||  |||||| ||||| |||||||||||||||     
T  31166441 atacttcataaatttccatcattttgaaaattcttcaaattattattcaaacaatagaattcatctcaaaatatttgcattccatcaaaacattacatta 31166342  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
    |||| ||| |||||  |||||||||||    
T  31166341 tctcaaaacattccctcatccaaacac 31166315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 37036891 - 37037017
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||| ||||| |||||| || ||||  |||||||||||| ||||||||||||||||    
T  37036891 atacttcataaatttctatcattttgaaaattcttcaaattattatccgaacaatggaatttacatcaaaatatttgaattccctcaaaacattacattc 37036990  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| |||||  |||||||||||    
T  37036991 actcaaaacattccctcatccaaacac 37037017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 49659347 - 49659222
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||||| |||||| |||||| ||  ||||||||||||    
T  49659347 atacttcataaattaccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttaaattccctcgtaacattacattc 49659248  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| | | ||||| ||||||||||||    
T  49659247 cctcaatacattcc-ccatccaaacac 49659222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 31195587 - 31195458
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||| |||||||  |||||||||||||||||||||| |||||| ||||||| ||||||||||||||  ||||| |||| | ||| ||||||||||||    
T  31195587 atacttcgtaaatttttatcattttaaaaattcttcaaattattatacaaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattc 31195488  T
Q  116 tctcgaaatattcctccatccaaacactct 145  Q
     ||| ||||||||||||||| || ||||||    
T  31195487 cctcaaaatattcctccatcaaagcactct 31195458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 37447301 - 37447394
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||  ||||||||||    
T  37447301 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcacatcaaagtatttgaattctctcaaaacatt 37447394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 41822485 - 41822578
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| || || ||||||||||||| ||||||||||    
T  41822485 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcatcttaaagtatttgaattccctcaaaacatt 41822578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 44571332 - 44571239
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| |||| ||||||||||||| ||||||||||    
T  44571332 atactttataaatttccatcattttaaaaattctttaaattattatccaaacaatggaattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 15467905 - 15468004
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| | |||||| |||||||    
T  15467905 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattc 15468004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 32287874 - 32288001
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaac-aacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    |||||| ||||||||||||||||||  |||||||||||| |||||||||||| || ||| ||||| |||| ||||||||||| | |||||||||||||||    
T  32287874 atactttataaatttccatcattttggaaattcttcaaattattatccaaactaatggatttcacttcaaagtatttgaatttcctcaaaacattacatt 32287973  T
Q  115 ctctcgaaatattcctccatccaaacac 142  Q
    | ||| |||  |||||||||||||||||    
T  32287974 ccctcaaaactttcctccatccaaacac 32288001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 41822639 - 41822733
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttg-aattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||| ||||||||||    
T  41822639 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcatctcaaagtatttgaaattccctcaaaacatt 41822733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 48953699 - 48953607
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||  |||||||||||||  |||||||||||||||||||||||    
T  48953699 atacttcataaatatccatcattttgaaaattcttcaaattattatccaaacaatagaattcacctcaa-atatttgaattccttcaaaacatt 48953607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 47820344 - 47820245
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||||  || ||||||||||||| | |||||| |||||||    
T  47820344 atacttcataaatttccatcattttaaaaatgcttcaaattattatccaaacaatgaaattcaccctaaagtatttgaattcccttaaaacaatacattc 47820245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 32647432 - 32647309
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||| || ||||||| ||| ||||||||||| | |||||||| ||||||     
T  32647432 atacttcataaatttccatcattttgaaaatgcttcaaattaatatccaaacaatggtattcaccccaaagtatttgaatttcctcaaaacaatacattt 32647333  T
Q  116 tctcgaaatattcctccatccaaa 139  Q
      || ||| |||||||| ||||||    
T  32647332 cttcaaaacattcctccgtccaaa 32647309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 26501065 - 26501147
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  26501065 atccaaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 26501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 51847982 - 51847857
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||| |||||||||||||||| | || ||||| |||| ||| |||||||| | ||||||||||| ||| |||||||||| ||| |||||||||||||     
T  51847982 atacttgataaatttccatcattcttaatattctccaaattatcatccaaacgatggaattcacctaaag-tatttgaatttctttaaaacattacatta 51847884  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||||||||||||||||    
T  51847883 cctcaaaacattcctccatccaaacac 51847857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 947040 - 946931
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    |||||||||||| |||||||| ||||| ||||||| |||||||||||||| |||||||||||||  ||||||||||| | |||||| | ||||||| |||    
T  947040 ttcataaatttctatcattttgaaaatgcttcaaattattatccaaacaatggaattcacctcatagtatttgaatttcctcaaaataatacattccctc 946941  T
Q  120 gaaatattcc 129  Q
     ||| |||||    
T  946940 aaaacattcc 946931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 32128161 - 32128068
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||| ||||||||| |||||||||| ||||||||||||| ||||||  |||||| |||||||||| ||| ||||||||||||| ||||||||||    
T  32128161 atacctcataaattcccatcattttgaaaattcttcaaattattattaaaacaatggaattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 43622921 - 43623046
Alignment:
Q  17 tacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattct 116  Q
    |||||| ||||||| ||||||||| ||||||||||||| |||||| |||| || | |||||||||||| |||||| ||||   ||||||||||||||||     
T  43622921 tacttcgtaaattttcatcattttgaaaattcttcaaattattattcaaataatgaaattcacctcaaagtatttaaattttctcaaaacattacattcc 43623020  T
Q  117 ctcgaaatattcctccatccaaacac 142  Q
     || ||| ||||| ||||||||||||    
T  43623021 atcaaaacattcccccatccaaacac 43623046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 49216280 - 49216373
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||| | |||| ||||||| ||||||||||||| || |||||||    
T  49216280 atacttcataaatttccatcattttgaaaattctttaaattattatcccaacaatgaaatttacctcaaagtatttgaattccctcgaaacatt 49216373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 52135567 - 52135660
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||   |||| |||| ||  |||||||||||| ||||||||||    
T  52135567 atacttcataaatttccatcattttaaaaattcttcaaattatcatccaaacaataaaatttacctaaaaatatttgaattccctcaaaacatt 52135660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 946505 - 946407
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||  ||||||| | ||| |||||| |||||| |||||||| |||||||    
T  946505 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatagaattcatc-caaagtatttaaattccctcaaaacaatacattc 946407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 24273206 - 24273288
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| |||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||| ||||| ||||||||||||    
T  24273206 atccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 24273288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 42230852 - 42230758
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttc-aaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||| ||||  ||||| |||| | ||||||||||    
T  42230852 atacttcataaatttccatcattttaaaaattcttcaaaattattatccaaacaatgaaattcacttcaaaatatttaaattacctcaaaacatt 42230758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 50471881 - 50471791
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaac 106  Q
    |||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||   ||||||||| || ||||||||||||| |||||||    
T  50471881 atacttcaaaaatttccatcattttgaaaattctttaaattattatccaaacaataaaattcacctgaaagtatttgaattccctcaaaac 50471791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 34003588 - 34003511
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattc 97  Q
    ||||||||||||||||||||| | ||||| ||||| ||| |||||||||| |||||||||||||| ||||||||||||    
T  34003588 ttcataaatttccatcattttgataattcatcaaattatcatccaaacaatggaattcacctcaaagtatttgaattc 34003511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 34756511 - 34756428
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacactctc 146  Q
    |||||||  ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||||||    
T  34756511 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactctc 34756428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 35491288 - 35491189
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||  ||||  ||||| |||||  ||||||| || |||||    
T  35491288 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgaaattcatatcaaaatatttaaattctctcaaaacgttgcattc 35491189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 142
Target Start/End: Original strand, 47165197 - 47165280
Alignment:
Q  59 tatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||| ||||||||||| || ||||||||||||| |||||||||||||||  ||| ||| ||| ||||||||||||||    
T  47165197 tatccaaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacac 47165280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 10166636 - 10166532
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| |||||||||||||||| ||| |||| |||||||| |||| ||| || ||||||| | ||||||||| ||  ||||||| ||||||||||||||    
T  10166636 gaataaaatacttcataaatttc-atcgttttgaaaattctccaaattatcattcaaacaatgaaattcacctaaatatatttgagttccttcaaaacat 10166538  T
Q  109 tacatt 114  Q
    ||||||    
T  10166537 tacatt 10166532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 13181719 - 13181630
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaa 105  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||||||| ||   |||| | ||||| ||||||||||||| ||||||    
T  13181719 atacttcataaatttccatcattttgaatattcttcaaattattatccaaaaaatataattaatctcaaagtatttgaattccctcaaaa 13181630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 15034743 - 15034664
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| || ||| ||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  15034743 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 15034664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 15034743 - 15034813
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  15034743 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 15034813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 23536142 - 23536072
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  23536142 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 23536072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 34003504 - 34003414
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatta 110  Q
    ||||||||||||  ||||||| ||||||| ||||| ||| ||||||| || |||||||||||||| |||||||||| || |||||| ||||    
T  34003504 ttcataaatttctctcattttgaaaattcatcaaattatcatccaaataatggaattcacctcaaagtatttgaatgccctcaaaatatta 34003414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 38277489 - 38277420
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||   |||||||||||    
T  38277489 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacac 38277420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 4038150 - 4038229
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| || ||| ||||||||| |||||||||||| ||| ||| ||||||||| ||||||||||||    
T  4038150 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 4038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 50005163 - 50005084
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||||||||| | | ||||||||  |||||||||||||||||||| |||||||||  |||||||||||    
T  50005163 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacac 50005084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 21267756 - 21267841
Alignment:
Q  19 cttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaa 105  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||||||| | |||| | ||||| |||||  |||||| ||||||    
T  21267756 cttcataaatt-ccatcattttgaaaattcttcaaattattatccaaacaatgaaatttatctcaaagtattcaaattccctcaaaa 21267841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 27935569 - 27935639
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||||| ||| ||||||| | |||||||||||||||| ||| ||||||| ||||||||||||||    
T  27935569 gaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacac 27935639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 32201900 - 32201811
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaacta-ttatccaaacaacggaattcacctcaaggtatttgaattccttcaaaa 105  Q
    |||||||| ||||| | |||||||| ||||||||||||| || |||||||||||| ||||||||||| ||   ||||||||||||||||||    
T  32201900 atacttca-aaattccaatcattttgaaaattcttcaaattaattatccaaacaatggaattcaccttaaaacatttgaattccttcaaaa 32201811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 45565469 - 45565399
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| ||  || ||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||    
T  45565469 gaattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacac 45565399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 50005163 - 50005233
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||| ||||||||  || ||||||||| |||||||||||||||  ||| ||||||||||||||||||||||    
T  50005163 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacac 50005233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 23956297 - 23956372
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaa 84  Q
    |||||| |||||| ||||||||||||||| || | |||| |||||| ||| |||||||||| | ||||||||||||    
T  23956297 gaataaaatactttataaatttccatcatattgataatttttcaaattataatccaaacaatgaaattcacctcaa 23956372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 27804340 - 27804419
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||| || || ||| |||||||||||| ||||||||||||  ||| ||| ||||||||||||||||||    
T  27804340 caaacaatagaattcaacttaaagtagttgaattccttctaaacattacatttcctcaaaacattcctccatccaaacac 27804419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 4038146 - 4038080
Alignment:
Q  76 tcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||| ||||||||    
T  4038146 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacac 4038080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 27804340 - 27804270
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||||||  || ||||||||| |||||| ||||||||| ||| ||| ||||| ||||||||||||    
T  27804340 gaattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacac 27804270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 30190220 - 30190290
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||||||  || ||||||| | |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  30190220 gaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacac 30190290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 40264114 - 40264184
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||| ||||||||  || ||||||||| |||||||||||||||  ||| ||||||||| ||||||||||||    
T  40264114 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacac 40264184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 16325161 - 16325122
Alignment:
Q  26 aatttccatcattttaaaaattcttcaaactattatccaa 65  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  16325161 aatttccatcattttaaaaattcttcaaattatcatccaa 16325122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 1902192 - 1902139
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaa 69  Q
    |||| |||| ||||||||||||||||||||||||  ||| ||| ||||||||||    
T  1902192 atacctcatgaatttccatcattttaaaaattctctaaattatcatccaaacaa 1902139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 38277504 - 38277568
Alignment:
Q  77 cacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||  || ||||||||| |||||||||||||||  ||| ||||||||| ||||||||||||    
T  38277504 cacctcaaaataattgaattccctcaaaacattacattacctcaaaatattcc-ccatccaaacac 38277568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 5474474 - 5474526
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||  |||||||||| || ||| ||||||||| ||||||||||||||||    
T  5474474 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattc 5474526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 32573024 - 32573072
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaa 138  Q
    ||||||||| |||||||||||||||  ||| ||||||||| ||||||||    
T  32573024 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaa 32573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 5e-49; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 7302477 - 7302351
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  7302477 atacttcataaatttccatcattttgaaaattcttcaaactattatccaaacaatggaattcacctcaaggtatctgaattccttcaaaacattacattc 7302378  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
    |||| ||| |||||  |||||||||||    
T  7302377 tctcaaaacattccctcatccaaacac 7302351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 47767563 - 47767437
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  47767563 atacttcataaatttccatcattttgaaaattcttcaaactattatccaaacaatgtaattcacctcaaggtatttgaattccttcaaaacattacattc 47767464  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  47767463 cctcaaaacattcccccatccaaacac 47767437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 37054525 - 37054399
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  37054525 atacttcataaatttccatcattttgaaaattcttcaaactattacccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattc 37054426  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||  ||| ||||| ||||||||||||    
T  37054425 ccttaaaacattcccccatccaaacac 37054399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 42005894 - 42006020
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  42005894 atacttcataaattttcatcattttgaaaattcttcaaactattacccaaacaatgaaattcacctcaaggtatttaaattccttcaaaacattacattc 42005993  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  42005994 cctcaaaacattcccccatccaaacac 42006020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 30766684 - 30766571
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30766684 atacttcataaatttctatctttttgaaaattcttcaaactattatccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattc 30766585  T
Q  116 tctcgaaatattcc 129  Q
     ||| ||| |||||    
T  30766584 cctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 21307466 - 21307599
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| |||||||||||||||| |||||||| |||||| | |||| |||||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  21307466 gaataaaatacttcataaatttctatcattttgaaaattttacaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacat 21307565  T
Q  109 tacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| | | ||| ||||| ||||||||||||    
T  21307566 tacattcccgcaaaacattcccccatccaaacac 21307599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 53129784 - 53129925
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||| ||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| | ||||||||||||||    
T  53129784 atacttcataaattttcatcattttgaaaatacttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattc 53129883  T
Q  116 tctcgaaatattcctccatccaaacactctcagagaaaatga 157  Q
     ||||||| |||||  ||||||||||| |||  |||||||||    
T  53129884 cctcgaaacattccctcatccaaacacactcttagaaaatga 53129925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 7976679 - 7976580
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||    
T  7976679 atacttcataaatttccatcattttaaaaattctttaaattattatccaaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattc 7976580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 34088702 - 34088576
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||| |||||||||| ||| ||||||||||||| |||||||| |||||||    
T  34088702 atacttcataaatttccatcattttgaaaatgcttcaaattattatcctaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattc 34088603  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||| ||||||||||||||    
T  34088602 cctcaaaacatttctccatccaaacac 34088576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 36397930 - 36398056
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||| |||||||||| ||| ||||||||||||| |||||||| |||||||    
T  36397930 atacttcataaatttccatcattttgaaaatgcttcaaattattatccgaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattc 36398029  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  36398030 cctcaaaacattcccccatccaaacac 36398056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 48947736 - 48947610
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||  |||||||| |||||||    
T  48947736 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattctctcaaaacaatacattc 48947637  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| |||| |||||||||||||    
T  48947636 cctcaaaacattcttccatccaaacac 48947610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 671560 - 671700
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||| |||||||| |||||||||| ||| |||| |||||||| |||||||| |||||||    
T  671560 atacttcataaatttccatcattttgaaaatgcttcaaattattacccaaacaatggaattcaccccaaagtatctgaattccctcaaaacaatacattc 671659  T
Q  116 tctcgaaatattcctccatccaaacactctcagagaaaatg 156  Q
     ||| ||| ||||| | ||||||| || |||  ||||||||    
T  671660 cctcaaaacattcccctatccaaaaacactcttagaaaatg 671700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 53470370 - 53470510
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| | |||||||| ||| ||||||||||||| |||||||| || ||||    
T  53470370 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatgaaattcaccccaaagtatttgaattccctcaaaacaatagattc 53470469  T
Q  116 tctcgaaatattcctccatccaaacactctcagagaaaatg 156  Q
     ||| ||| ||| |  ||||||||||| |||  ||||||||    
T  53470470 cctcaaaacatttcctcatccaaacacactctaagaaaatg 53470510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 46706783 - 46706682
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtattt--gaattccttcaaaacattacat 113  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||  ||||||  || |||||||||||    
T  46706783 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttaagaattctctcgaaacattacat 46706684  T
Q  114 tc 115  Q
    ||    
T  46706683 tc 46706682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 52527167 - 52527041
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||| | |||||||| |||||| ||||||| |||||||||||||| || |||||||||| |    
T  52527167 atacttcataaatttccattattttgaaaattcttcaaattatcaaccaaacaatggaatttacctcaaagtatttgaattcctccataacattacatcc 52527068  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
      || ||| ||||| ||||||||||||    
T  52527067 cttcaaaacattcccccatccaaacac 52527041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 2104865 - 2104772
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||||| |||| ||||||||||||| || |||||||    
T  2104865 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatagaattcacatcaaagtatttgaattccctcgaaacatt 2104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 38506817 - 38506910
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||  |||||||||||| ||||||||||    
T  38506817 atactttataaatttccatcattttgaaaattcttcaaattattattcaaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 30767236 - 30767112
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacc-tcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||| |  | ||||||||||||||||| ||||||| |||    
T  30767236 atacttcataaatttccatcattttgaaaattcttcaaattattacccaaacaatggaattcaccttttaagtatttgaattccttcataacattagatt 30767137  T
Q  115 ctctcgaaatattcctccatccaaa 139  Q
    | ||| ||| ||| | |||||||||    
T  30767136 ccctcaaaacattaccccatccaaa 30767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 47284137 - 47284233
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaa 105  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||  |||| ||||||||||||| ||||||    
T  47284137 gaataaaatacttcataaatttccatcattttgaaaattcttcaaattattattcaaacaatggaattcatatcaaagtatttgaattccctcaaaa 47284233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 26323487 - 26323394
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||| ||  ||| |||||||||||||||||||||||||| || ||||||||||| | ||||||||||    
T  26323487 atacttcataaatttccatcattttgaaaatcctataaattattatccaaacaacggaattcacctaaaagtatttgaattacctcaaaacatt 26323394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 43863892 - 43863979
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaa 104  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| |||||    
T  43863892 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcacc-caaagtatttgaattccctcaaa 43863979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 21731028 - 21730936
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacat 113  Q
    |||||||||||||||||||||||||||| || ||| |||||| ||||||| | |||||| |||||  |||||||||||||||||||||||||||    
T  21731028 ttcataaatttccatcattttaaaaattgtttaaattattattcaaacaatgaaattcatctcaa-atatttgaattccttcaaaacattacat 21730936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 31021811 - 31021728
Alignment:
Q  16 atacttcataaatttccatcatttt-aaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattcc 98  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||| |||||||  |||||||| |||| |||||||||||||    
T  31021811 atacttcataaatttccatcattttgaaaaattcttcaaattattatgcaaacaatagaattcacatcaaagtatttgaattcc 31021728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 19475903 - 19475824
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaa 139  Q
    |||||||||| |||||||||||||| ||||||||||| | ||| |||||||||||| ||| ||| |||||||||||||||    
T  19475903 atccaaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 35279863 - 35279926
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcac 79  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | |||||||    
T  35279863 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgtaattcac 35279926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 44692906 - 44692976
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  44692906 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 44692976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 46672800 - 46672870
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  46672800 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 46672870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 47337012 - 47336914
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    |||||||||||||||| |||||||| ||||||||  ||| ||| |||||||||| ||||||||||| ||  ||||| ||||   |||||||||||||||    
T  47337012 atacttcataaatttctatcatttttaaaattctataaattatcatccaaacaatggaattcacctaaacatatttaaattatctcaaaacattacatt 47336914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 26547146 - 26547093
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaa 69  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  26547146 atacttcataaatttccatcattttgaaaattcttcaaattattatccgaacaa 26547093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 55460471 - 55460378
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||| ||||||||||||||||| |||||||| | || ||| |||||||| | ||||||||| |  | ||||||||||||| ||||||||||    
T  55460471 atacttcgtaaatttccatcattttgaaaattctcctaattatcatccaaacgatggaattcacttacaagtatttgaattccctcaaaacatt 55460378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 50168553 - 50168649
Alignment:
Q  18 acttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||| |||||||||| |||| |||||||| || | |||||||||||||| |||||||| || ||  ||||||| || | |||||||||||||||    
T  50168553 acttcattaatttccatccttttgaaaattctccatattattatccaaacaatggaattcagctaaaattatttgagtttcctcaaaacattacatt 50168649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 5415858 - 5415937
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| || ||| ||||||||| |||||||||||| ||| ||| ||||||||| ||||||||||||    
T  5415858 caaacaatagaattcaccttaaagtagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacac 5415937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 6837003 - 6837081
Alignment:
Q  19 cttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattc 97  Q
    ||||||||||||| |||||||| ||||||||||||| |||||| ||||||| | | |||| |||||  |||||||||||    
T  6837003 cttcataaatttctatcattttgaaaattcttcaaattattattcaaacaatgaatttcaactcaaactatttgaattc 6837081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 9129428 - 9129498
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| |||||  |||||||||||    
T  9129428 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 9129498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 9137535 - 9137605
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| |||||  |||||||||||    
T  9137535 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 9137605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 27251978 - 27252048
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| || || ||||||||||||    
T  27251978 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacac 27252048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 31189338 - 31189436
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||| |||||||||| ||||||||| || ||| ||| | |||||| |   |||| ||||||| ||||||||||||  |||||||||||||||    
T  31189338 atacttcataagtttccatcatcttaaaaattatttaaattatcacccaaacgataaaatttacctcaaagtatttgaattctctcaaaacattacatt 31189436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 44288400 - 44288525
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||| ||  |||||||| ||||| |||| ||| ||||||| || | |||||     || ||||||||||||| ||||||||||| |||     
T  44288400 atacttcataaattttcaatattttaaagattctccaaattatcatccaaataatgtaattcgttcaaaagtatttgaattccatcaaaacattatatta 44288499  T
Q  116 tctcgaaatattcctccatccaaaca 141  Q
     ||| ||| |||||||||||||||||    
T  44288500 cctcaaaacattcctccatccaaaca 44288525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 31070490 - 31070415
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaa 139  Q
    |||||||  ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| |||||||||    
T  31070490 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc-ccatccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 8762213 - 8762154
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    |||||||||| ||||||||| |||| ||||||||||||| ||| ||||||||||| ||||    
T  8762213 atccaaacaatggaattcacatcaaagtatttgaattccctcataacattacattatctc 8762154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 9007430 - 9007489
Alignment:
Q  50 tcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||| |||||||||||||| | ||||||||| || |||||||||||| |||||||||||    
T  9007430 tcaaattattatccaaacaatgaaattcacctaaaagtatttgaattcgttcaaaacatt 9007489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 5415854 - 5415788
Alignment:
Q  76 tcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||| || ||| ||||||||| |||||||||||||||| ||| ||||||||| | ||||||||||    
T  5415854 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacac 5415788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 46429480 - 46429550
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||| ||||||||  || |||||||||||||||||||||||||  ||| |||||||||  |||||||||||    
T  46429480 gaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaatattccctcatccaaacac 46429550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 49457418 - 49457348
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| || ||  ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  49457418 gaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 49457348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 28092289 - 28092220
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaaca 141  Q
    ||||||||||||| ||| ||||||||| ||||||||| |||||  ||| ||| ||||| |||||||||||    
T  28092289 gaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaaca 28092220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 34396451 - 34396530
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattcc 98  Q
    |||||||||||||| |||||||||| ||   |||||||| ||| ||||||| || | |||| ||||||| |||||||||||||    
T  34396451 atacttcataaattcccatcattttgaa---tcttcaaattatcatccaaagaatgaaatttacctcaaagtatttgaattcc 34396530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 9129428 - 9129349
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||| || || ||| ||||||||| |||||||||||||||| ||| ||||| ||  ||||||||||||    
T  9129428 caaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacac 9129349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 9137535 - 9137456
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||| || || ||| ||||||||| |||||||||||||||| ||| ||||| ||  ||||||||||||    
T  9137535 caaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacac 9137456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 44436342 - 44436263
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| ||  || ||||||| | |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  44436342 caaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacac 44436263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 44692906 - 44692827
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| || ||  ||||||||| |||||||||||| ||| ||| ||| ||||| ||||||||||||    
T  44692906 caaacaatagaattcaccttaaagtggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacac 44692827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 32666016 - 32665978
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaa 54  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  32666016 atacttcataaattttcagcattttaaaaattcttcaaa 32665978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 36636010 - 36635976
Alignment:
Q  19 cttcataaatttccatcattttaaaaattcttcaa 53  Q
    ||||||||||||||||||||||||||||| |||||    
T  36636010 cttcataaatttccatcattttaaaaattattcaa 36635976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 39110469 - 39110399
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||||| ||| |||||||||  ||||||||||||||| ||| ||| ||| || |||||||||||    
T  39110469 gaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacac 39110399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 44436342 - 44436384
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||    
T  44436342 gaattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 54761549 - 54761598
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||||||||| |||||| || |||| ||||||||||||| ||||||||||    
T  54761549 atccaaacaatggaatttacatcaaagtatttgaattccctcaaaacatt 54761598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 1796165 - 1796209
Alignment:
Q  10 aataatatacttcataaatttccatcattttaaaaattcttcaaa 54  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||||    
T  1796165 aataaaatactttataaattttcatcattttaaaaattcatcaaa 1796209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 28182187 - 28182215
Alignment:
Q  17 tacttcataaatttccatcattttaaaaa 45  Q
    |||||||||||||||||||||||||||||    
T  28182187 tacttcataaatttccatcattttaaaaa 28182215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 37321626 - 37321558
Alignment:
Q  71 ggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaa 139  Q
    ||||||||||| || ||| ||||||| | |||||||||||| ||  ||| ||||||||| |||||||||    
T  37321626 ggaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaa 37321558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 46199275 - 46199239
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttca 52  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  46199275 atactttataaatttcaatcattttaaaaattcttca 46199239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 24045091 - 24044965
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24045091 atacttcataaatttccatcattttgaaaattcttcaaactattacccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattc 24044992  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| |||||  |||||||||||    
T  24044991 cctcaaaacattccctcatccaaacac 24044965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 28324614 - 28324740
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  28324614 atacctcataaatttccatcattttgaaaattcttcaaactattatccaaacaatgtaattcagctcaaggtatttgaattccttcaaaacattacattc 28324713  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||||||||||||||||    
T  28324714 cctcaaaacattcctccatccaaacac 28324740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 26520384 - 26520484
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  26520384 gaataaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacat 26520483  T
Q  109 t 109  Q
    |    
T  26520484 t 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 29257303 - 29257429
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| | |||||| |||||||    
T  29257303 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattc 29257402  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  29257403 cctcaaaacattcccccatccaaacac 29257429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 29482759 - 29482885
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| |||||||| ||| |||    
T  29482759 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacgttc 29482858  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  29482859 cctcaaaacattcccccatccaaacac 29482885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 44346630 - 44346756
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| | |||||| |||||||    
T  44346630 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattc 44346729  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  44346730 cctcaaaacattcccccatccaaacac 44346756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 44889485 - 44889359
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||| ||||||| | |||||||| |||| |||||||||||||| ||||||||| |||| ||||||||||||| ||||||||||| ||||    
T  44889485 atacttcataaattttcatcattatgaaaattctacaaattattatccaaacaatggaattcacatcaaagtatttgaattccctcaaaacattatattc 44889386  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||||||||||||||||    
T  44889385 cctcaaaacattcctccatccaaacac 44889359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 33377249 - 33377375
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| |||||||| || ||||    
T  33377249 atacttcgtaaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatatattc 33377348  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  33377349 cctcaaaacattcccccatccaaacac 33377375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 34008912 - 34008819
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  34008912 atacttcataaatttccatcattttgaaaattctttaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 14369 - 14244
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||| | |||||||| ||| ||||||||||||| | ||||||||||||||    
T  14369 atacttcataaatttccatcattttgaaaatacttcaaattattatctaaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattc 14270  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  14269 cctccaaacattcc-ccatccaaacac 14244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 13144714 - 13144616
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||||||  ||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| ||| |||||||||||    
T  13144714 atacttcataaattctcatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 8049385 - 8049272
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||||||||| | |||| ||||||| ||||||||||||| ||||||||||| ||||    
T  8049385 atacttcataaatttcaatcattttgaaaattcttcaaattattatccaaacaatgaaatttacctcaaagtatttgaattccctcaaaacattatattc 8049286  T
Q  116 tctcgaaatattcc 129  Q
     ||| ||| |||||    
T  8049285 cctcaaaacattcc 8049272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 35978959 - 35979082
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||| |||||||||||||| |||   ||| |||||||||||||| |||||||||||||| ||||||||||||| ||  || |||||||||    
T  35978959 atacttcataaattcccatcattttaaaatttc---aaattattatccaaacaatggaattcacctcaaagtatttgaattccctcttaagattacattc 35979055  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||||||||||||||||    
T  35979056 cctcaaaacattcctccatccaaacac 35979082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 1088229 - 1088355
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||||| |||||||| ||||| ||| ||| |||||||||||||| |||||| ||| |||  |||||||||| | |||||||| |||||||    
T  1088229 atacttcataaatttctatcattttgaaaatgcttgaaattattatccaaacaatggaatttaccccaaaatatttgaatttcctcaaaacaatacattc 1088328  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
    |||| ||| ||||||||| ||||||||    
T  1088329 tctcaaaacattcctccacccaaacac 1088355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 9982767 - 9982669
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||||||||||||  ||||| |||||  |||||||||||||||    
T  9982767 atacttcataaattttcatcattttaaaaattcttcaaattattatctaaacaatggaattcacctcaaaatatttaaattctctcaaaacattacatt 9982669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 33986135 - 33986037
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||| | |||||||||||| ||||||||||||  |||||||||||||||    
T  33986135 atacttcatgaatttccatcattttgaaaattcttcaaattattatctaaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacatt 33986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 31976527 - 31976632
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | |||||| |||||  |||||||||| | ||||| |||    
T  31976527 gaataaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgaaattcatctcaaaatatttgaatttcctcaaagcat 31976626  T
Q  109 tacatt 114  Q
    ||||||    
T  31976627 tacatt 31976632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 6416315 - 6416227
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaa 104  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| ||||||||| |||| |||||||||| ||||||||    
T  6416315 atacttcataaatttccatcattttgaaaattcttcaaattattatcaaaacaatggaattcacttcaaagtatttgaatcccttcaaa 6416227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 43167678 - 43167768
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaac 106  Q
    ||||||||||||||| || |||||| ||||||||||||| ||||||| |||||||  |||||||||||| ||||||||||||||| |||||    
T  43167678 atacttcataaattttcaacattttgaaaattcttcaaattattatctaaacaactaaattcacctcaaagtatttgaattcctttaaaac 43167768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 24510229 - 24510322
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||  || || ||| || ||||||||||    
T  24510229 atacttcataaatttccatcattttaaaaattcttcaaattattattcaaacaatggagttcacctcaaaatacttaaatcccctcaaaacatt 24510322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 29611485 - 29611408
Alignment:
Q  32 catcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||| ||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||| ||||||||||    
T  29611485 catcattttgaaaattcttcaaattattatccaaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 34388638 - 34388570
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaa 84  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  34388638 atacttcataaatttccatcattttaaaagttctttaaattattatccaaacaatggaattcacctcaa 34388570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 31980435 - 31980533
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||||||||||||||||| ||||| | ||||| ||||||||||| || | |||||||| |||  |||||||||||| | |||||||||||||    
T  31980435 atacttcataaatttccatcattttgaaaatacatcaaattattatccaaataatgaaattcaccccaaaatatttgaattcccttaaaacattacatt 31980533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 35404694 - 35404792
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    |||||||||||||||| ||||||||||||| ||||  || |||||||||||||    |||||||||||| ||||||||||| | |||||| ||||||||    
T  35404694 atacttcataaatttctatcattttaaaaactcttggaattattatccaaacagtaaaattcacctcaaagtatttgaatttcctcaaaatattacatt 35404792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 36625177 - 36625266
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaa 105  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| ||| ||||| || |  || ||||||||| ||||||    
T  36625177 atacttcataaatttccatcattttgaaaattcttcaaattattatctaaacaatggatttcacatcgaaataattgaattccctcaaaa 36625266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 23011821 - 23011739
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| |||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||| ||||  || |||||||||    
T  23011821 atccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacac 23011739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 36103188 - 36103106
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| | ||||||| |||| ||||||||||| | | |||||||||||||| ||| ||| ||||||||||||||||||    
T  36103188 atccaaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacac 36103106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 40734053 - 40734115
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattca 78  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||| ||||||||    
T  40734053 atacttcataaatttccatcattttgaaaatgcttcaaattattatcaaaacaatggaattca 40734115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 3853700 - 3853621
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||||||||| ||| ||||||| | |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  3853700 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacac 3853621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 3858158 - 3858079
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||||||||| ||| ||||||| | |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  3858158 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacac 3858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 15186769 - 15186872
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||| ||| |||||||||  || ||| | ||||||||  |||||||||| ||  ||||||||||   |||||||||||||||     
T  15186769 atacttcataaatttccatcaatttgaaaattcttttaattatcacccaaacaatagaattcaccttaaactatttgaatttactcaaaacattacatta 15186868  T
Q  116 tctc 119  Q
    ||||    
T  15186869 tctc 15186872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 17110944 - 17111023
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| || ||| ||||||||| |||||||||||||||| ||| ||| ||| ||||||||||||||    
T  17110944 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacac 17111023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 515528 - 515610
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| | ||||||| |||| ||||||||| ||| | ||||||||||||||  || ||| ||||||||||||||||||    
T  515528 atccaaacaatgaaattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacac 515610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 8469628 - 8469535
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||| ||||| ||||||||| |||||| |  ||| |||||||||||||| ||||||||||| |  | | ||||||||| ||||||||||    
T  8469628 atacttcatgaattttcatcattttgaaaattatctaaattattatccaaacaatggaattcacctaataggacttgaattccctcaaaacatt 8469535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 30444929 - 30444978
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  30444929 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 33902724 - 33902672
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  33902724 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 33902672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 40046877 - 40046809
Alignment:
Q  74 attcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||| ||||| ||| ||||||||| |||||||||||||||| ||| ||| |||| |||||||||||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacac 40046809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 4156242 - 4156321
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||| || || ||| ||||||||| |||||||||||||||| ||| ||||||||  ||||||||||||    
T  4156242 caaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacac 4156321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 7079468 - 7079393
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaa 84  Q
    |||||| ||||||| ||||||| |||| |||| ||||||||| ||| |||||||||||||| | |||| |||||||    
T  7079468 gaataaaatacttcttaaattttcatcgttttgaaaattctttaaattattatccaaacaatgaaatttacctcaa 7079393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 17110944 - 17110874
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||||| ||| ||||||||| |||||||||||||||| ||| ||| ||| | ||||||||||||    
T  17110944 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacac 17110874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 42711364 - 42711434
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| | ||||||||||    
T  42711364 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacac 42711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 14800045 - 14800114
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||  | ||| ||||||||| |||||||||||| ||| ||| ||||||||| ||||||||||||    
T  14800045 aattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 14800114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 11744718 - 11744797
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| ||  || ||||||||||||| |||||||||||| ||| ||||||||   |||||||||||    
T  11744718 caaacaatagaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacac 11744797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 13404902 - 13404832
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||| ||||||||  || ||||||||| |||||||||||||||  ||| ||||||| | ||||||||||||    
T  13404902 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacac 13404832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 10593198 - 10593149
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaa 69  Q
    |||||||| ||  |||||||| ||||||||||||| ||||||||||||||    
T  10593198 ttcataaagtttaatcattttgaaaattcttcaaattattatccaaacaa 10593149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 28190680 - 28190780
Alignment:
Q  41 aaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaac 140  Q
    |||||||||| ||  ||||||||||||||  |||||||||||||  ||||||||||| ||   || |||||| || ||||||| |||||  |||||||||    
T  28190680 aaaaattctttaagttattatccaaacaattgaattcacctcaaaatatttgaattcatt-tcaatattacaatcactcgaaacattcccacatccaaac 28190778  T
Q  141 ac 142  Q
    ||    
T  28190779 ac 28190780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 13404912 - 13404968
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcc 129  Q
    |||||| ||||| ||| ||||||||| |||||||||||||||| ||| ||| |||||    
T  13404912 aattcatctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 13404968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 22303809 - 22303935
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  22303809 atacttcataaatttccatcattttgaaaattcttcaaactattacccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattc 22303908  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  22303909 cctcaaaacattcccccatccaaacac 22303935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 32250030 - 32250162
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||||    
T  32250030 gaataaaatacttcataaattaccatcattttaaaaattctttaaattattatccaaacaatggaattcatctcaaggtatttgaattccctcaaaacat 32250129  T
Q  109 tacattctctcgaaatattcctccatccaaacac 142  Q
    ||| ||| ||| ||| ||||| ||||||||||||    
T  32250130 tactttccctcaaaacattcc-ccatccaaacac 32250162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 9894261 - 9894387
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| |   ||||||||||||    
T  9894261 atacttcataaattcccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttgaattccctggtaacattacattc 9894360  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  9894361 cctcaaaacattcccccatccaaacac 9894387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 41762154 - 41762280
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| | |||||| |||||||    
T  41762154 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattc 41762253  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  41762254 cctcaaaacattcccccatccaaacac 41762280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 14834955 - 14834829
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| | |||||||||||| ||||||| ||||| | ||||||||||||||    
T  14834955 atacttcataaattttcatcattttgaaaattcttcaaattattatccaaacaatgaaattcacctcaaagtatttggattcccttaaaacattacattc 14834856  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||||||| ||||  |||| |||||||    
T  14834855 cctcgaaacattctcccatgcaaacac 14834829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 17542300 - 17542393
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  17542300 atacttcataaatttccatcattttaaaaattctttaaattattattcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 33146304 - 33146211
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  33146304 atacttcataaatttccatcattttgaaaattctttaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 37241049 - 37241142
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| |||||| | ||||||||    
T  37241049 atacttcataaatttccatcattttaaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttcaattccctgaaaacatt 37241142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 927432 - 927307
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||| ||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| |||||||| |||||||    
T  927432 atacttcataaatttccat-attttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattc 927334  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||| | ||||||||||||    
T  927333 cctcaaaacatttccccatccaaacac 927307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 15270786 - 15270886
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| ||||||||||||||||||||||||| || ||||| |||| |||||| ||||||| |||||||||||||| ||||||||||||| |||||||||    
T  15270786 gaataaaatacttcataaatttccatcattttgaatattctacaaattattattcaaacaatggaattcacctcaaagtatttgaattccctcaaaacat 15270885  T
Q  109 t 109  Q
    |    
T  15270886 t 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 22305232 - 22305132
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| ||||||||||||||||| ||||||| |||||||| |||| |||||||||||||| |||||||||||||| ||| ||||||||| |||||||||    
T  22305232 gaataaaatacttcataaatttccttcattttgaaaattctacaaattattatccaaacaatggaattcacctcaaagtagttgaattccctcaaaacat 22305133  T
Q  109 t 109  Q
    |    
T  22305132 t 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 22767081 - 22766957
Alignment:
Q  18 acttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctc 117  Q
    ||||| ||||||||||||||| | ||||||||| ||| ||||||||||||||  |||||||||| || ||||||||||||| ||||||||||| |||| |    
T  22767081 acttcgtaaatttccatcattctgaaaattctttaaattattatccaaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccc 22766982  T
Q  118 tcgaaatattcctccatccaaacac 142  Q
    || ||| ||||| ||||||||||||    
T  22766981 tcaaaacattcccccatccaaacac 22766957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 28489593 - 28489513
Alignment:
Q  17 tacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattc 97  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  28489593 tacttcataaatttccatcattttaaaaattctttaaattattatcgaaacaatggaattcacctcaaagtatttgaattc 28489513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 28490115 - 28490031
Alignment:
Q  24 taaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  28490115 taaatttccatcattttgaaaattcctcaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 35111357 - 35111258
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||  ||| |||| ||||  |||||||||||||||||||||||||||||    
T  35111357 atacttcataaattttcatcattttgaaagttcttcaaattattatccaaacaatagaactcacatcaaaatatttgaattccttcaaaacattacattc 35111258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 12480038 - 12479940
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||| | |||||||||||| ||||||||||| | ||||||| |||||||    
T  12480038 atacttcatgaatttccatcattttgaaaattcttcaaattattatctaaacaatgaaattcacctcaaagtatttgaatttcctcaaaactttacatt 12479940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 37722877 - 37722959
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||    
T  37722877 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacac 37722959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 40090381 - 40090479
Alignment:
Q  44 aattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||  ||| ||| ||||| ||||||||||||    
T  40090381 aattctttaaattattatccaaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacac 40090479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 10314780 - 10314655
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||  |||||||| ||||  |||||||||||| | |||| ||||||||     
T  10314780 atacttcataaattttcatcattttgaaaattcttcaaattattatccaaacaatagaattcacatcaaaatatttgaattcccttaaaatattacattt 10314681  T
Q  116 tctcgaaatattcctccatccaaaca 141  Q
      || ||| ||| |||||||||||||    
T  10314680 cttcaaaacatttctccatccaaaca 10314655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 17492587 - 17492679
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    ||||||| ||||||| ||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||  |||||||||||| |||||||||    
T  17492587 atacttcttaaattttcatcattttgaaaattcttcaaattatcatccaaacaatggaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 37241537 - 37241640
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaa----cggaattcacctcaaggtatttgaattccttcaaaacattac 111  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||       |||||| ||||| ||||||||||||| ||||||||||||    
T  37241537 atacttcataaatttccatcattttgaaaattcttcaaaatattatccaaacaaatagatcaattcagctcaaagtatttgaattccctcaaaacattac 37241636  T
Q  112 attc 115  Q
    ||||    
T  37241637 attc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 22302653 - 22302557
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacc-tcaaggtatttgaattccttcaaaacattac 111  Q
    ||||||||||||||||||||||||| |||| |||||||| |||||||||||||| ||||||| || |  | ||||||||||||| ||||||||||||    
T  22302653 atacttcataaatttccatcattttgaaaaatcttcaaattattatccaaacaatggaattcgccttttaagtatttgaattccctcaaaacattac 22302557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 19533890 - 19533972
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| | |||||||||||| ||||||||||||| ||| |||||||||||| ||| ||| ||||||||||||||||||    
T  19533890 atccaaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacac 19533972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 35379473 - 35379349
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||||||| |||||| ||||| ||||||| ||| |||||| |||   ||||||| |||| | ||||||||||| |||||||||||||||     
T  35379473 atacttcataaatttccaccattttgaaaat-cttcaaattatcatccaatcaataaaattcacttcaaagaatttgaattccctcaaaacattacatta 35379375  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
    |||| ||| ||||| ||||||||||||    
T  35379374 tctcaaaacattcc-ccatccaaacac 35379349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 34105202 - 34105109
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||| |||||||| |||||||| ||||||||||||| |||||||||||||| | |||||| ||||| |||||||||||   ||||||||||    
T  34105202 atacttcgtaaatttctatcattttgaaaattcttcaaattattatccaaacaatgaaattcatctcaaagtatttgaattttctcaaaacatt 34105109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 30519134 - 30519036
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||||||||||    |||||||| |||  |||||||||||| ||| ||||||||||||    
T  30519134 atacttcataaattcccatcattttgaaaattcttcaaattattatccaaacataa-aattcaccgcaaaatatttgaattccctcataacattacattc 30519036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 30559474 - 30559376
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||||||||||    |||||||| |||  |||||||||||| ||| ||||||||||||    
T  30559474 atacttcataaattcccatcattttgaaaattcttcaaattattatccaaacataa-aattcaccgcaaaatatttgaattccctcataacattacattc 30559376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 25935273 - 25935355
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| |||||||||||||| ||||||||||| | ||| |||||||||||| ||| ||| ||||| ||||||||||||    
T  25935273 atccaaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacac 25935355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 31316289 - 31316205
Alignment:
Q  19 cttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaa 103  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||||| ||  ||||||| ||||| || |||||||||| ||||    
T  31316289 cttcataaatttccatcatttaaaaaattcttcaaattatcatccaaataatagaattcatctcaaagtgtttgaattccctcaa 31316205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 20523208 - 20523287
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| || ||| ||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||    
T  20523208 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacac 20523287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 9764426 - 9764492
Alignment:
Q  76 tcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| ||| ||||||||| |||||||||||||||| ||||||| ||||| ||||||||||||    
T  9764426 tcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacac 9764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 15374035 - 15373965
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| |||| |||||||||||||    
T  15374035 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacac 15373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 2721557 - 2721625
Alignment:
Q  74 attcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 2721625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 6772152 - 6772245
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattac 111  Q
    |||||||||||||||||||| |||| | |||| |||||| ||| |||||||||| | |||||||||||  |||||| |||||| ||| ||||||||    
T  6772152 atacttcataaatttccatcgttttgataattattcaaattatcatccaaacaatgaaattcacctca--gtatttaaattccctcataacattac 6772245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 8264646 - 8264586
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaa 69  Q
    |||||| |||||||||||||||||||||||||  |||||||||||| ||||||| ||||||    
T  8264646 gaataaaatacttcataaatttccatcattttggaaattcttcaaattattatctaaacaa 8264586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 37145484 - 37145564
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaac 140  Q
    |||||||||| | |||||||||||| ||||||||||||  ||| |||||||||||| ||| ||| ||||| ||||||||||    
T  37145484 atccaaacaatgaaattcacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaac 37145564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 6634089 - 6634168
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||||||||| ||| ||||| ||||| |||| ||||||||| |||||||| |||| ||||||||||||    
T  6634089 caaacaatagaattcacctcaaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacac 6634168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 9764422 - 9764343
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| || ||| ||||||||| |||||||||||| ||| ||| ||||||||| ||||||||||||    
T  9764422 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 9764343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 17493104 - 17493207
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||| |||||||||||||||||| |||||||| |||| ||| |||||||||| |||||||| ||  |  |||||||||| | || |||||||| |||     
T  17493104 atactttataaatttccatcattttgaaaattctccaaattatcatccaaacaatggaattcatctagatatatttgaatttcctccaaacattaaattt 17493203  T
Q  116 tctc 119  Q
    ||||    
T  17493204 tctc 17493207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 11601150 - 11601076
Alignment:
Q  36 attttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatta 110  Q
    ||||| ||||||||||||| ||| ||||||| ||   ||||||||||||  ||||||||||||||||||||||||    
T  11601150 attttgaaaattcttcaaattatcatccaaataataaaattcacctcaaattatttgaattccttcaaaacatta 11601076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 15374035 - 15374114
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| |  ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  15374035 caaacaatagaattcaccttagagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 15374114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 3563352 - 3563282
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| || ||| ||||||||| |||||||||||||||| ||| ||| ||||| | ||||||||||    
T  3563352 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacac 3563282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 141
Target Start/End: Complemental strand, 8255130 - 8255033
Alignment:
Q  43 aaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaaca 141  Q
    |||||||  ||| |||||||||||||| | ||||||||| ||  |||||||||||| |||||||||||||||  ||  || ||||||||||| ||||||    
T  8255130 aaattctctaaattattatccaaacaatgaaattcacctaaaa-tatttgaattccctcaaaacattacattaccttaaagtattcctccattcaaaca 8255033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 15804397 - 15804327
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||||| ||| ||||||||| |||||||| ||||||| ||| ||| ||||| ||||||||||||    
T  15804397 gaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacac 15804327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 23092037 - 23091968
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| || || ||| |||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||    
T  23092037 gaattcaacttaaagtagttgaattccttcaaaacattacattccctcaaaatattcc-ccatcaaaacac 23091968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 26281264 - 26281334
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| || ||| ||||||||| |||||||||||||||| ||| |||  |||| ||||||||||||    
T  26281264 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacac 26281334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 37090395 - 37090281
Alignment:
Q  33 atcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctcc 132  Q
    |||||||| |||||||| ||  ||||||||||||||| ||||||||| | ||  |||||||||| | |||||||||  ||||  ||| ||| |||| ||     
T  37090395 atcattttgaaaattctccatgctattatccaaacaatggaattcacataaaaatatttgaatttcctcaaaacatcgcattacctcaaaacattcttct 37090296  T
Q  133 atccaaacactctca 147  Q
    |||||||||| ||||    
T  37090295 atccaaacacactca 37090281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 40809416 - 40809346
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||||| ||| ||||||||| ||||||||||| |||||||| ||| ||| | ||||||||||||    
T  40809416 gaattcaactcaaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacac 40809346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 32470939 - 32470890
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaa 139  Q
    |||||||||||||||||||||||||| ||| ||| ||| |||||||||||    
T  32470939 ttgaattccttcaaaacattacattccctcaaaacatttctccatccaaa 32470890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 32390056 - 32390112
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattc 128  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||    
T  32390056 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaaattc 32390112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 40643919 - 40643971
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  40643919 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 40643971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 40089756 - 40089799
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactatt 59  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||    
T  40089756 atacttcataaatttccatcattttgaaaattctttaaattatt 40089799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 2316463 - 2316532
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||  |||||||||||||||| ||| ||| |||  |||||||||||||    
T  2316463 gaattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaacatt-ttccatccaaacac 2316532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 11409312 - 11409274
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaa 54  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  11409312 atacttcacaaatttccatcattttaaaaattctccaaa 11409274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 12991276 - 12991338
Alignment:
Q  22 cataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaa 84  Q
    ||||||||| ||| ||||||||||   |||||| ||||||||||||||  |||||||||||||    
T  12991276 cataaattttcattattttaaaaaaatttcaaattattatccaaacaatagaattcacctcaa 12991338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 13064899 - 13064961
Alignment:
Q  22 cataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaa 84  Q
    ||||||||| ||| ||||||||||   |||||| ||||||||||||||  |||||||||||||    
T  13064899 cataaattttcattattttaaaaaaatttcaaattattatccaaacaatagaattcacctcaa 13064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 16515079 - 16515010
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| | | ||||||||| ||||||| |||||||| ||| ||| ||| ||||||||||||||    
T  16515079 gaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaacatt-ctccatccaaacac 16515010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 17444369 - 17444423
Alignment:
Q  16 atacttcataaatttccatcatttt-aaaaattcttcaaactattatccaaacaa 69  Q
    ||||||||||||||||||||||||| |||||||||  |||  |||||||||||||    
T  17444369 atacttcataaatttccatcattttgaaaaattctctaaatcattatccaaacaa 17444423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 20320631 - 20320713
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| |||||||||  ||| ||||||||||||| | |||| |||||||||  || ||| |||| | |||||||||||    
T  20320631 atccaaacaatggaattcacaccaaagtatttgaattcccttaaaatattacattccttcaaaacattcattcatccaaacac 20320713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 20523208 - 20523138
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| ||| || ||||||||| ||| ||| ||||  ||||||||||||    
T  20523208 gaattcacctcaaagtagttgaattccctcagaatattacattccctcaaaacattctcccatccaaacac 20523138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 28828422 - 28828372
Alignment:
Q  92 gaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 28828372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 28828431 - 28828501
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||| ||||||||  || ||||||||| |||||||||||||||  ||| ||||||| | ||||||||||||    
T  28828431 gaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacac 28828501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 12064451 - 12064500
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||||||||| | |||||||||||| |||||| |||||| ||||||||||    
T  12064451 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 12064500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 2316435 - 2316383
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||| ||||||||| ||| ||| ||||| ||||||||||||    
T  2316435 ttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacac 2316383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 6634072 - 6634020
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||||||  ||| |||||| || ||||||||||||    
T  6634072 ttgaattccctcaaaacattacattacctcaaaatatccccccatccaaacac 6634020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 8e-45; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 30698412 - 30698289
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  30698412 atacttcacaaatttccatcattttgaaaattcttcaaactattatccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattc 30698313  T
Q  116 tctcgaaatattcctccatccaaa 139  Q
     ||| ||| ||||| |||||||||    
T  30698312 cctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 7227954 - 7228080
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||||||||||||||||||    
T  7227954 atacttcataaatttccatcattttgaaaattcttcaaactattatccaaacaatgaaatttacctcaaggtatttaaattccttcaaaacattacattc 7228053  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
    |||| ||| ||| | ||||||||||||    
T  7228054 tctcaaaacatttccccatccaaacac 7228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 7167609 - 7167708
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  7167609 atacttcataaatttccatcattttgaaaattcttcaaactattacccaaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattc 7167708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 769167 - 769041
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| | |||||| |||||||    
T  769167 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattc 769068  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  769067 cctcaaaacattcccccatccaaacac 769041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 1583751 - 1583877
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| | |||||| |||||||    
T  1583751 atacttcataaatttccatcattttgaaaatacttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattc 1583850  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  1583851 cctcaaaacattcccccatccaaacac 1583877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 33189199 - 33189325
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| | |||||| |||||||    
T  33189199 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattc 33189298  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  33189299 cctcaaaacattcccccatccaaacac 33189325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 11141436 - 11141310
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| | |||||||| ||| ||||||||||||| | |||||| |||||||    
T  11141436 atacttcataaatttccatcattttgaaaatacttcaaattattatccaaacaatgtaattcaccccaaagtatttgaattcccttaaaacaatacattc 11141337  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  11141336 cctcaaaacattcccccatccaaacac 11141310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 8736383 - 8736476
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  8736383 atacttcataaatttccatcattttgaaaattctttaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 17905780 - 17905659
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||| || ||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  17905780 ttcataaatttccatcattttgaaaatccttcaaattattatccaaa-aatggaattcacctcaaaatatttgaattcctttaaaacattacattctctc 17905682  T
Q  120 gaaatattcctccatccaaacac 142  Q
     ||| |||||  ||||| |||||    
T  17905681 aaaacattccctcatcctaacac 17905659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 28740727 - 28740601
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||| |||||| || |||| ||||||||||||| ||||||||||||||||    
T  28740727 atacttcataaatttccatcattttgaaaattcttcaaattatcatctaaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattc 28740628  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||| | |||| |||||||    
T  28740627 cctcaaaacatttccccattcaaacac 28740601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 3092413 - 3092274
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||||| |||||||| ||||| ||| ||| |||||||||||||| |||||| ||| ||| ||||||||||| | |||||||| |||||||    
T  3092413 atacttcataaatttctatcattttgaaaatgcttgaaattattatccaaacaatggaatttaccccaaagtatttgaatttcctcaaaacaatacattc 3092314  T
Q  116 tctcgaaatattcctccatccaa--acactctcagagaaa 153  Q
     ||| ||| ||||||||||||||  ||||||| |||||||    
T  3092313 cctcaaaacattcctccatccaaatacactcttagagaaa 3092274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 32839590 - 32839689
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||| || |||||||||||  ||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||| ||||||||||||||||    
T  32839590 atacttcatgaaattccatcatttggaaaattcttcaaattattatccaaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattc 32839689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 13017906 - 13017784
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    ||||||||||| ||||||||| ||||| ||||||| |||||||||||||| |||||||||||||| ||||||||||||| | |||| ||||||||| |||    
T  13017906 ttcataaattttcatcattttgaaaatccttcaaattattatccaaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattccctc 13017807  T
Q  120 gaaatattcctccatccaaacac 142  Q
     ||| ||| |  |||||||||||    
T  13017806 aaaacatttccacatccaaacac 13017784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 20935837 - 20935744
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||||||||||||||| |||||||| ||||||||||||| ||| |||||||||| ||||||||| |||| ||||||||||||| ||||||||||    
T  20935837 atacttcataaatttcaatcattttgaaaattcttcaaattatcatccaaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 32840134 - 32840227
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||| | |||||||||||| |||||| |||||| ||||||||||    
T  32840134 atacttcatgaatttccatcattttgaaaattcttcaaattattatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 32840227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 41585632 - 41585725
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||   | ||||| |||| ||||||||||||| ||||||||||    
T  41585632 atacttcataaatttccatcattttaaaaattcttcaaattattatccaaacaataaatttcacttcaaagtatttgaattccctcaaaacatt 41585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 7309705 - 7309804
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||| || |||||||||| ||| ||||||||||||| | |||||| |||||||    
T  7309705 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaataatggaattcaccccaaagtatttgaattcccttaaaacaatacattc 7309804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 44255765 - 44255674
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaaca 107  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  ||||||||| ||| ||||||||||||  ||||||||    
T  44255765 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatagaattcaccccaaagtatttgaattctctcaaaaca 44255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 7611830 - 7611912
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattcc 98  Q
    ||||||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||||| |||| |||||||||||||    
T  7611830 atacttcataaatttccatcattttgaaaattcttcaaattcttatccaaacaatggaattcacatcaaagtatttgaattcc 7611912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 11036473 - 11036375
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | || ||   |||||| ||||| ||||||||||||||| |||||||||||||    
T  11036473 atacttcataaatttccatcattttaaaaattcttcaaattattattctaataataaaattcatctcaatgtatttgaattcctttaaaacattacatt 11036375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 11532239 - 11532321
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||    
T  11532239 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacac 11532321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 35047621 - 35047747
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||| |||||||||||| ||||| ||||| ||||||| |||||||||||||  |||||||||| ||| ||||||||||||| | |||||| ||||||     
T  35047621 atactttataaatttccattattttgaaaatgcttcaaattattatccaaacattggaattcaccccaaagtatttgaattcccttaaaacaatacattt 35047720  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  35047721 cctcaaaacattcccccatccaaacac 35047747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 39630355 - 39630230
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| |||||  |||||| ||||||||||||||  |||||| ||||||  |||||||||||| |||||||| |||||||    
T  39630355 atacttcataaatttccatcattttgaaaatagttcaaattattatccaaacaatagaattcccctcaa-atatttgaattccctcaaaacaatacattc 39630257  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||| |||||| |||||||    
T  39630256 cctcaaaacatttctccattcaaacac 39630230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 45094413 - 45094539
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||||| | || ||| || |||||| ||||||||||| ||||    
T  45094413 atacttcataaatttccatcattttgaaaattcttcaaattcttatccaaacaatggaattcactttaaagtagttaaattccctcaaaacattatattc 45094512  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| |||||  ||| |||||||    
T  45094513 cctcaaaacattccctcattcaaacac 45094539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 11793982 - 11793900
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| |||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||||||||| ||||||||||||    
T  11793982 atccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacac 11793900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 6749288 - 6749206
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattcc 98  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||  ||||| |||| ||| |||||||||    
T  6749288 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgggtttcacatcaaagtaattgaattcc 6749206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 40026192 - 40026070
Alignment:
Q  19 cttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctct 118  Q
    |||||||||||| ||||||||||||||   || |||||||||| |||||||  ||||||||||||| |||||| |||| | ||||||||||| |||  ||    
T  40026192 cttcataaatttacatcattttaaaaaaatttaaaactattattcaaacaatagaattcacctcaaagtatttaaatttcctcaaaacattatattacct 40026093  T
Q  119 cgaaatattcctccatccaaaca 141  Q
    | ||||||||| |||| ||||||    
T  40026092 caaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 21504581 - 21504488
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||  | ||||||| ||||||||||||| |||||| ||||||| |||||||| |||||  |||||||||||| ||||||||||    
T  21504581 atacttcataaattaacttcattttgaaaattcttcaaattattattcaaacaatggaattcatctcaaaatatttgaattccctcaaaacatt 21504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 740835 - 740704
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||| || |||||||   ||||||||||||   || |||||||   ||||||||||||||     
T  740835 atacttcataaatttccattattttgaaaattcttcaaattatcattcaaacaataaaattcacctcaaatgatatgaattctcacaaaacattacatta 740736  T
Q  116 tctcgaaatattcctccatccaaacactctca 147  Q
    |||| ||| |||  ||||||||||||| ||||    
T  740735 tctcaaaacatttatccatccaaacacgctca 740704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 27033574 - 27033495
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||||||||| ||| ||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||    
T  27033574 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacac 27033495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 1730180 - 1730095
Alignment:
Q  19 cttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaa 105  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||||||| | |||||| ||||| |||||| |||||| ||||||    
T  1730180 cttcataaatt-ccatcattttgaaaattcttcaaattattatccaaacaatgaaattcatctcaaagtatttaaattccctcaaaa 1730095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 10480206 - 10480124
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| |||||||||||||| ||||||||||||| ||  |||||||||||| ||| ||| ||||| ||||||||||||    
T  10480206 atccaaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacac 10480124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 44205602 - 44205693
Alignment:
Q  18 acttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||| ||||||||||||  ||| ||||||| ||  ||||| || | || ||||||||||||| ||||||||||    
T  44205602 acttcataaatttccatcattttcaaaattcttcaatttatcatccaaataatagaatttacataaaagtatttgaattccctcaaaacatt 44205693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 11716483 - 11716413
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| |||| |||||||||||||    
T  11716483 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacac 11716413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 14365775 - 14365705
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  14365775 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 14365705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 12263557 - 12263476
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattc 97  Q
    ||||||||||||||||||||||||| ||||   |||||| |||||||||||||| | |||||| |||||  |||||||||||    
T  12263557 atacttcataaatttccatcattttgaaaaaatttcaaattattatccaaacaatgaaattcaactcaaaatatttgaattc 12263476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 784868 - 784947
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| || ||| ||||||||| ||||||||||||||||  || ||||||||| ||||||||||||    
T  784868 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacac 784947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 41461590 - 41461669
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||||||  || ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  41461590 caaacaatagaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 41461669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 14537274 - 14537204
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||| | |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  14537274 gaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacac 14537204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 14365801 - 14365853
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  14365801 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 14365853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 11594899 - 11594840
Alignment:
Q  56 tattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||   |||||||||||| ||||||| |||||||||||| |||||||||    
T  11594899 tattatccaaacaattaaattcacctcaaagtatttgtattccttcaaaatattacattc 11594840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 11607304 - 11607257
Alignment:
Q  64 aaacaacggaattcacctcaaggtatttgaattccttcaaaacattac 111  Q
    |||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 784868 - 784798
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||||| ||| || ||||||||||||||||||||||| ||| ||| |||  |||||||||||||    
T  784868 gaattcaactcaaagtagttaaattccttcaaaacattacattccctcaaaacatttttccatccaaacac 784798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 14306753 - 14306802
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaa 69  Q
    ||||||||||| |||||||||||||||| || ||| ||||||||||||||    
T  14306753 ttcataaattttcatcattttaaaaattatttaaattattatccaaacaa 14306802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 11684656 - 11684604
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  11684656 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 11684604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 2274734 - 2274856
Alignment:
Q  19 cttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctct 118  Q
    |||||||||| ||||||||||| |||| ||| |||  | |||||||||||| |||||| | || ||  |||||||||||| | |||| |||  |||  ||    
T  2274734 cttcataaatctccatcattttgaaaaatctccaat-tcttatccaaacaatggaattgatctaaaaatatttgaattcccttaaaatattgtattacct 2274832  T
Q  119 cgaaatattcctccatccaaacac 142  Q
    ||||| |||||| |||||||||||    
T  2274833 cgaaacattccttcatccaaacac 2274856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 11595402 - 11595355
Alignment:
Q  64 aaacaacggaattcacctcaaggtatttgaattccttcaaaacattac 111  Q
    |||||| ||||||||||||||  |||||||||||| ||||||||||||    
T  11595402 aaacaatggaattcacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 11606804 - 11606745
Alignment:
Q  56 tattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||   |||||||||||| ||||||| ||||||| |||| |||||||||    
T  11606804 tattatccaaacaattaaattcacctcaaagtatttgtattccttgaaaatattacattc 11606745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 17180372 - 17180302
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| |||||  || ||||||||| |||||||||||||||| ||| ||| |||||  |||||||||||    
T  17180372 gaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 17180302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 44256191 - 44256260
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||||||  || | ||||||| |||||||||||||||  ||| ||||||||| ||||||||||||    
T  44256191 gaattcacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaacac 44256260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 11716501 - 11716550
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaa 139  Q
    ||||||||| |||||||||||||||| ||| ||| ||||| |||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 4206 - 4080
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||||    
T  4206 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattc 4107  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
    |||| ||| ||||||  ||||||||||    
T  4106 tctcaaaacattcctttatccaaacac 4080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 2993 - 2872
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  2993 ttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcaa-atatttgaattccctcaaaacattacattctctc 2895  T
Q  120 gaaatattcctccatccaaacac 142  Q
    |||| ||||| ||||| ||||||    
T  2894 gaaacattcccccatctaaacac 2872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 2125988 - 2125862
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| |||||||| |||||||    
T  2125988 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattc 2125889  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||||||||| ||||||||||||    
T  2125888 cctcaaaatattcccccatccaaacac 2125862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 29091268 - 29091169
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||||| |||| ||||||||||||| ||||||||||||||||    
T  29091268 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattc 29091169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 35470253 - 35470127
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| |||||||| |||||||    
T  35470253 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattc 35470154  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||| | ||||| ||||||    
T  35470153 cctcaaaacatttcaccatctaaacac 35470127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 46242486 - 46242580
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatta 110  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||||||||||| ||||||  |||||||||||||||||    
T  46242486 atacttcataaatttccatcattttgaaaattcttcaaattattctccaaacaatggaattcacctcaaagtattttgattccttcaaaacatta 46242580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 1539754 - 1539649
Alignment:
Q  34 tcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctcca 133  Q
    ||||||| |||||||| |||| |||||||||||||| | |||||||||||| ||||||||||||| |||||||||||||||| ||| ||| |||||||||    
T  1539754 tcattttgaaaattctacaaattattatccaaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctcca 1539655  T
Q  134 tccaaa 139  Q
    ||||||    
T  1539654 tccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 53760732 - 53760825
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||| ||||  |||||||||||| ||||||||||    
T  53760732 atacttcataaatttccatcattttaaaaattcttcaaattattatccaaacaatagaattcacatcaaaatatttgaattccctcaaaacatt 53760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 56339264 - 56339171
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||| |||| ||||||||||||| ||||||||||    
T  56339264 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgaaattcacatcaaagtatttgaattccctcaaaacatt 56339171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 40338187 - 40338287
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| ||||||||||||||||||||||||| ||||||||  ||| |||||||||||||| | |||||||||||| ||||||||||||| |||||||||    
T  40338187 gaataaaatacttcataaatttccatcattttgaaaattctgtaaattattatccaaacaatgaaattcacctcaaagtatttgaattccatcaaaacat 40338286  T
Q  109 t 109  Q
    |    
T  40338287 t 40338287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 16516303 - 16516176
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactatta-tccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||||||| ||||||||| ||||||||||||| | ||| ||||||||| ||| ||||| |||| |||||| ||||||||||||||||||||||    
T  16516303 atacttcataaattttcatcattttgaaaattcttcaaattcttaatccaaacaatggagttcacatcaaagtatttaaattccttcaaaacattacatt 16516204  T
Q  115 ctctcgaaatattcctccatccaaacac 142  Q
    |  || ||| ||||| ||||||||||||    
T  16516203 ccgtcaaaacattcccccatccaaacac 16516176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 41139604 - 41139506
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||  |||||||||| || ||||||||||| | |||||||||||||||    
T  41139604 atacttcataaattttcatcattttaaaaattctttaaattattatccaaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacatt 41139506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 42775736 - 42775643
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||| ||||| |||||| || ||| |||||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  42775736 atacttcataaatttccattattttgaaaattatttaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 42776768 - 42776642
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| | ||||||||| || |||||||||||   ||||||||||||||      
T  42776768 atacttcataaatttccatcattttgaaaattcttcaaattatcatccaaacaatgaaattcacctaaaagtatttgaatttactcaaaacattacataa 42776669  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||  ||| |||| |||||||||||||    
T  42776668 cctaaaaacattcttccatccaaacac 42776642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 17727196 - 17727103
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||| ||||||||||| ||||| ||||||||||||| |||||||||||||| | |||||||||||| |||||||||||||  |||||||||    
T  17727196 atacttcgtaaatttccataattttgaaaattcttcaaattattatccaaacaatgaaattcacctcaaagtatttgaattcccacaaaacatt 17727103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 26534624 - 26534525
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||| |||||| |||||||| ||||||||| ||| ||||||||||||||  ||||||||  ||| ||||||||||||| ||||||||||||||||    
T  26534624 atacttcatgaatttctatcattttgaaaattcttgaaattattatccaaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattc 26534525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 27284604 - 27284685
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattc 97  Q
    |||||||||||||||||||||||||||||||| ||||||  ||||| ||||||| | |||||||||||| ||||||||||||    
T  27284604 atacttcataaatttccatcattttaaaaattattcaaatcattatacaaacaatgaaattcacctcaaagtatttgaattc 27284685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 31947722 - 31947628
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattaca 112  Q
    ||||||| |||||||| |||||||| ||||||||||||| |||||||||||||| |||||||||||||  ||||||||||||| ||  |||||||||    
T  31947722 atacttcgtaaatttctatcattttgaaaattcttcaaattattatccaaacaatggaattcacctca--gtatttgaattccctcgtaacattaca 31947628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 40548168 - 40548253
Alignment:
Q  24 taaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||| | ||||||||||    
T  40548168 taaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaatttcctcaaaacatt 40548253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 41498575 - 41498644
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||  || |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  41498575 aattcacctcaaaataattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacac 41498644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 46243032 - 46243130
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| ||||||| ||||||||||||||||| ||||||||| ||| |||||||||||||| |||||| |||||||  |||||||||||  |||||||||    
T  46243032 gaataaaatacttcttaaatttccatcattttgaaaattctttaaattattatccaaacaatggaatt-acctcaa-atatttgaattctctcaaaacat 46243129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 10354473 - 10354375
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    |||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||  ||||||||||| |  ||||| ||||   |||||||||||||||    
T  10354473 atacttcataaattcccatcattttgaaaattcttcaaattattatccaaataagagaattcacctccaaatatttcaattttctcaaaacattacatt 10354375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 10633119 - 10633037
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| | |||||||||||| ||||||||||||| ||| |||||||||||| ||| ||| ||||| ||||||||||||    
T  10633119 atccaaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 10633037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 52294987 - 52295080
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||  ||||||||| ||||||||||||| |||||||||||||| | |||||  |||||  |||||||||||| || |||||||    
T  52294987 atacttcataaattctcatcattttgaaaattcttcaaattattatccaaacaatgaaattcgtctcaaaatatttgaattccctcgaaacatt 52295080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 42776185 - 42776249
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacc 80  Q
    |||||||||||||||| |||||||| ||||| ||||||| |||||||||||||| ||||||||||    
T  42776185 atacttcataaatttctatcattttgaaaatgcttcaaattattatccaaacaatggaattcacc 42776249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 4896715 - 4896786
Alignment:
Q  71 ggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||||||| | ||||||||||||    
T  4896715 ggaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacac 4896786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 19461682 - 19461801
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    ||||||||||||||||||| |||||||||| || | ||||||||||||||  ||||| |  ||||  |||||||||||  |||||||||||||||   ||    
T  19461682 ttcataaatttccatcattctaaaaattctccatattattatccaaacaatagaatttatatcaaattatttgaattcgctcaaaacattacattacttc 19461781  T
Q  120 gaaatattcctccatccaaa 139  Q
     ||||||| | |||||||||    
T  19461782 aaaatatttccccatccaaa 19461801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 31473936 - 31473854
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||   |||||||||||| ||||||||||||| ||| |||||||||||| ||| ||| ||||| ||||||||||||    
T  31473936 atccaaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 31473854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 10128049 - 10128125
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaa 139  Q
    |||||||  ||||||| ||||| ||| ||||||||| |||||||||||||||||||| ||| ||||| |||||||||    
T  10128049 caaacaatagaattcatctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaa 10128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 16300160 - 16300260
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattct-tcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||||||| |||||||| ||||| | | | ||| | ||||| |||||| |||||||||||||| |||||||||||   |||||||||||||||    
T  16300160 atacttcataaattttcatcatttgaaaaaatttctgaaattgttatcaaaacaatggaattcacctcaaagtatttgaattttctcaaaacattacatt 16300259  T
Q  115 c 115  Q
    |    
T  16300260 c 16300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 28845955 - 28845875
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacact 143  Q
    |||||||  |||||||||| || ||| ||||||||| || ||||||||||||| ||| ||| |||||||||||||||||||    
T  28845955 caaacaatagaattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaacattcctccatccaaacact 28845875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 49111396 - 49111466
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||||||  || ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  49111396 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 49111466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 52494054 - 52493958
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||| |||||||| |||||||||||||  ||| ||| |||||||||||| ||||||||| ||  ||||| |||||| || ||||||||||||    
T  52494054 atacttcataa-tttccatccttttaaaaattctcaaaattatcatccaaacaacgaaattcacctaaaaatattttaattccctc-aaacattacatt 52493958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 4490158 - 4490105
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaa 69  Q
    |||| |||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  4490158 atacatcataaatttccatcattttgaaaattctttaaattattatccaaacaa 4490105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 13318601 - 13318654
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaa 69  Q
    ||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  13318601 atacttcataagtttctatcattttgaaaattcttcaaattattatccaaacaa 13318654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 14982354 - 14982285
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| || ||| || |||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  14982354 aattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 14982285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 11041040 - 11040973
Alignment:
Q  74 attcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||| ||| ||||||||  |||||||||||||||| ||| ||||||||| ||||||||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattccctcaaaatattcc-ccatccaaacac 11040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 42844627 - 42844555
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatc 135  Q
    |||||||  ||||||||||||| ||| |||||||||||||||| ||||||||| ||| ||| ||||| |||||    
T  42844627 caaacaatagaattcacctcaaagtagttgaattccttcaaaatattacattccctcaaaacattcccccatc 42844555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 7352896 - 7352817
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| ||  || ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  7352896 caaacaatagaattcaccttaaaatagttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacac 7352817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 15660258 - 15660337
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||| ||||| ||| ||||||||| |||||||||||||||| ||| ||| |||||  |||||||||||    
T  15660258 caaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacac 15660337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 36455991 - 36455912
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| || ||| ||||||||| ||||||||||| |||| ||| ||| ||||| ||||||||||||    
T  36455991 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacac 36455912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 857323 - 857393
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||||| ||| ||||||||| |||||||||||||||| ||| ||| ||| | ||||||||||||    
T  857323 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacac 857393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 10128049 - 10127979
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||| ||||||||  || |||||||||||||||||||||||||   || ||||||||| ||||||||||||    
T  10128049 gaatccacctcaaaataattgaattccttcaaaacattacattacttcaaaatattcccccatccaaacac 10127979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 24705478 - 24705432
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaa 66  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||    
T  24705478 ttcataaatttctatcattttaaaaattcttcaaattattattcaaa 24705432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 36456010 - 36456080
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| || ||| ||||||| | |||||| ||||||||| ||| ||| ||||||||||||||||||    
T  36456010 gaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacac 36456080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 54566306 - 54566210
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaac---aacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||||||||||||||| |||||||||||||   |||||| |||||| |||||   || ||| ||||| |||| ||| ||||||||| ||||||||||    
T  54566306 atacttcataaatttcgatcattttaaaaaaatttcaaattattattcaaacaataatggatttcacatcaaagtaattgaattccctcaaaacatt 54566210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 1112679 - 1112610
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||||| ||| ||||||||| || ||||||||||||  ||| ||| ||||| ||||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacac 1112610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 4441394 - 4441337
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacactctca 147  Q
    ||||||||| |||||||||||||||| ||| ||| ||||| |||||||||||| ||||    
T  4441394 ttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactca 4441337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 47108411 - 47108358
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaa 69  Q
    ||||||||||||||| |||| |||||||||||||||||| | ||||| ||||||    
T  47108411 atacttcataaattttcatcgttttaaaaattcttcaaattgttatctaaacaa 47108358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 1107127 - 1107203
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaa 139  Q
    |||||||  |||||||||| |  ||| ||||||||| ||||||||||| |||| ||| ||||||||| |||||||||    
T  1107127 caaacaatagaattcaccttagagtagttgaattccctcaaaacattatattccctcaaaatattcccccatccaaa 1107203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 4896705 - 4896653
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||||||  ||| ||||||||| ||||||||||||    
T  4896705 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaaacac 4896653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 56118572 - 56118640
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaa 84  Q
    |||||| |||||||||||  ||||| |||||| |||||| |||||| ||||||| | ||||||||||||    
T  56118572 atactttataaatttccactattttgaaaattattcaaattattattcaaacaatgaaattcacctcaa 56118640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 115
Target Start/End: Complemental strand, 1107127 - 1107084
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||| ||||| ||| ||||||||||||||||||||||||||    
T  1107127 gaattcatctcaaagtagttgaattccttcaaaacattacattc 1107084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 5715815 - 5715749
Alignment:
Q  76 tcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||| |||| ||||||||||| | ||||||||||||||| |||| ||| |||||  |||||||||||    
T  5715815 tcacatcaaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacac 5715749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 7352896 - 7352966
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||| ||| ||||||||| |||||||||||||||| ||| ||| ||| | ||||||||||||    
T  7352896 gaattcaattcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacac 7352966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 24062902 - 24062840
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattca 78  Q
    |||||||| |||||||||||||||| ||||||||  ||| ||| |||||| ||| ||||||||    
T  24062902 atacttcacaaatttccatcattttgaaaattctcaaaattatcatccaatcaaaggaattca 24062840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 28845955 - 28846025
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||||| ||| ||||||||| ||||||||||| |||| ||| ||| ||| | ||||||||||||    
T  28845955 gaattcaactcaaagtagttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacac 28846025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 31742876 - 31742918
Alignment:
Q  100 tcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||    
T  31742876 tcaaaacattacattccctcaaaacattcctccatccaaacac 31742918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 1112706 - 1112775
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaaca 141  Q
    ||||||||||||| ||| ||||||||| || ||||||||||||  ||| ||| || || |||||||||||    
T  1112706 gaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaaca 1112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 30303857 - 30303800
Alignment:
Q  11 ataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaaca 68  Q
    |||| ||||||||||||||| ||| ||||| |||||||||||||  || |||||||||    
T  30303857 ataaaatacttcataaattttcattattttgaaaattcttcaaaaaatcatccaaaca 30303800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 857323 - 857271
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||  |||||||||| || ||| ||||||||| ||||||||||||||||    
T  857323 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattc 857271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 15660240 - 15660188
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||||||  ||| ||||||||| | ||||||||||    
T  15660240 ttgaattccctcaaaacattacattacctcaaaatattcccctatccaaacac 15660188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 31742833 - 31742781
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| ||||||||||||| |  ||  ||||||||||||||||||||||    
T  31742833 ttgaattccctcaaaacattacactaccttaaaatattcctccatccaaacac 31742781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 9784859 - 9784990
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| ||| |||||| ||| ||||||||||||| |||||||| |||||||    
T  9784859 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggatttcaccccaaagtatttgaattccctcaaaacaatacattc 9784958  T
Q  116 tctcgaaatattcctccatccaaacactctca 147  Q
     ||| ||| |||||||||||||||||| ||||    
T  9784959 cctcaaaacattcctccatccaaacacactca 9784990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 28539096 - 28539222
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| |||||||| |||||||    
T  28539096 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattc 28539195  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  28539196 cctcaaaacattcccccatccaaacac 28539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 18789189 - 18789300
Alignment:
Q  31 ccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcct 130  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||| ||| ||||||| |||||||| ||||||||||    
T  18789189 ccatcattttgaaaattcttcaaattattatccaaacaatggaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcct 18789288  T
Q  131 ccatccaaacac 142  Q
    ||||||||||||    
T  18789289 ccatccaaacac 18789300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 23455175 - 23455301
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| |||||||| |||||||    
T  23455175 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattc 23455274  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| |||||  |||||||||||    
T  23455275 cctcaaaacattccctcatccaaacac 23455301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 23548539 - 23548665
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||||| |||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||| | |||||||| |||||||    
T  23548539 atacttcataaatttctatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaatttcctcaaaacaatacattc 23548638  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||||||||||||||||    
T  23548639 cctcaaaacattcctccatccaaacac 23548665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 39342570 - 39342696
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| ||||||||||||| | |||||| |||||||    
T  39342570 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattc 39342669  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  39342670 cctcaaaacattcccccatccaaacac 39342696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 14603190 - 14603316
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||| ||| ||| ||||||||||||| | |||||| |||||||    
T  14603190 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattc 14603289  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  14603290 cctcaaaacattcccccatccaaacac 14603316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 35455935 - 35455809
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||| ||| ||| ||||||||||||| | |||||| |||||||    
T  35455935 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattc 35455836  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  35455835 cctcaaaacattcccccatccaaacac 35455809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 43791213 - 43791094
Alignment:
Q  24 taaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaa 123  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||| ||| ||     
T  43791213 taaatttccatcattttgaaaattcttcaaattattatccaaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattccctc-aac 43791115  T
Q  124 tattcctccatccaaacactct 145  Q
    | ||||| ||||||||||||||    
T  43791114 ttttcct-catccaaacactct 43791094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 30524386 - 30524260
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||||||||||||||||||||||||  |||||| |||||||||||||| | |||||| | ||| ||||||||||||| ||||||||||||||||    
T  30524386 atacttcataaatttccatcattttaaaaatatttcaaattattatccaaacaatgaaattcatcccaaagtatttgaattccctcaaaacattacattc 30524287  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
      || ||| ||| ||||||||| ||||    
T  30524286 cttcaaaacattactccatccatacac 30524260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 13814922 - 13815015
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||| || ||||||||| |||| ||||||||||||| ||||||||||    
T  13814922 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaataatggaattcacatcaaagtatttgaattccctcaaaacatt 13815015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 30587831 - 30587924
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| | || ||||||||||||| ||||||||||    
T  30587831 atacttcataaatttccatcattttgaaaatacttcaaactattatccaaacaatggaattcacattaaagtatttgaattccctcaaaacatt 30587924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 32650704 - 32650611
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||   |||||||||||| ||||||||||||| ||||||||||    
T  32650704 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 40495848 - 40495755
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||  |||||||||||| ||||||||||    
T  40495848 atacttcataaatttccatcattttaaaaatgcttcaaattattatccaaacaatggaattcaccccaaaatatttgaattccctcaaaacatt 40495755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 45984471 - 45984378
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||| | ||||||||    
T  45984471 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 45988831 - 45988738
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||| | ||||||||    
T  45988831 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 3905591 - 3905681
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatta 110  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||    
T  3905591 ttcataaattttcatcattttgaaaattcttcaaattattatccaaacaatagaattcacctcaaagtatttgaattccttgaaaacatta 3905681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 25189154 - 25189280
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||| | ||||||| |||| ||||||||||||| |||||||||| ||||     
T  25189154 atacttcgtaaatttccatcattttgaaaattcttcaaattatcatccaaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgcatta 25189253  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| |||||  |||||||||||    
T  25189254 cctcaaaacattcccacatccaaacac 25189280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 30629188 - 30629062
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| | |||||||| ||| |||||| |||||  | |||||| |||||||    
T  30629188 atacttcataaatttccatcattttgaaaatccttcaaattattatccaaacaatgaaattcaccccaaagtatttaaattctcttaaaacaatacattc 30629089  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| ||||| ||||||||||||    
T  30629088 cctcaaaacattcccccatccaaacac 30629062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 18789633 - 18789545
Alignment:
Q  31 ccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||||||| ||||||||||||| ||  ||||||||||||||||    
T  18789633 ccatcattttaaaaattcttcaaattattatctaaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattctctc 18789545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 15991022 - 15990896
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||  ||| ||| |||||||||| | |||| | ||||| |||||||||||||||||| ||||||||||     
T  15991022 atacttcataaatttccatcattttgaaaatactctaaattatcatccaaacaatgcaatttatctcaaagtatttgaattccttcaagacattacatta 15990923  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||||||| ||| ||||||||||    
T  15990922 cctcaaaatattactcaatccaaacac 15990896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 40495361 - 40495279
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattcc 98  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||||| |||| |||||||||||||    
T  40495361 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatagaattcacatcaaagtatttgaattcc 40495279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 26416084 - 26415991
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||||||||| | | |||||||||||| |||||||||||| || ||||||||    
T  26416084 atacttcctaaatttccatcattttgaaaattcttcaaattattatccaaaccatgaaattcacctcaaagtatttgaattcttttaaaacatt 26415991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 30080729 - 30080822
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||| || |||||| |||| | ||||||||||    
T  30080729 atacttcataaatttccatcattttgaaaattcttcaaattatcatccaaacaatggaattcacctgaaagtatttaaatttcctcaaaacatt 30080822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 14790244 - 14790151
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||||| |||||||| ||||||||||||||||||| ||| ||||||||||| ||   |||||||||||| ||||||||||||| ||||||||||    
T  14790244 atactttataaattttcatcattttaaaaattctttaaattattatccaaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 19865482 - 19865575
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    |||||||||||||| |||||||||| ||||||||| ||| ||||||| |||||| | |||||||||||| ||||||||||| | ||||||||||    
T  19865482 atacttcataaattaccatcattttgaaaattctttaaattattatcaaaacaatgaaattcacctcaaagtatttgaatttcctcaaaacatt 19865575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 40667472 - 40667379
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| | |||||| | ||| |||||| |||||| ||||||||||    
T  40667472 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatgaaattcatcccaaagtatttaaattccctcaaaacatt 40667379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 22391516 - 22391614
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||| |||||||||||||||||||| ||||| ||| |||||||||||||| | ||||||||||||  ||||| |||||  ||||||||||||||||    
T  22391516 atacttcagaaatttccatcattttaaaa-ttctttaaattattatccaaacaatgaaattcacctcaaaatatttaaattctctcaaaacattacattc 22391614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 6498737 - 6498819
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| || |||||| |||| ||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  6498737 atccaaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 6498819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 26162109 - 26162191
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| |||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||| ||||| ||||||||||||    
T  26162109 atccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 26162191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 42816680 - 42816598
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattcc 98  Q
    ||||||||||||||| ||||||||| ||||| ||||||| |||||||||||||| |||||||||| ||| |||||| ||||||    
T  42816680 atacttcataaattttcatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttaaattcc 42816598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 31632806 - 31632727
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| |||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||| ||||| ||||||||||||    
T  31632806 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacac 31632727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 5644761 - 5644682
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| |||||||||| |||||||    
T  5644761 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacac 5644682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 29065903 - 29065824
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| |||| |||||||||||||    
T  29065903 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacac 29065824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 35776927 - 35777009
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| || |||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||| |||||  |||||||||||    
T  35776927 atccaaataatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacac 35777009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 36328724 - 36328821
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacc--tcaaggtatttgaattccttcaaaacattac 111  Q
    |||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||  |||||||||  |  | ||||||||||||  ||||||||||||    
T  36328724 atacttcataaattaccatcattttgaaaattcttcaaattattatccaaataatagaattcacctttttaagtatttgaattctctcaaaacattac 36328821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 40110822 - 40110892
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||||||| ||| | ||||||||||||    
T  40110822 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacac 40110892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 33310935 - 33310839
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattaca 112  Q
    ||||||||||||||||||||||||| |||| ||| |||| || ||||||||||| |||||| | || || | ||||||||||  ||||| |||||||    
T  33310935 atacttcataaatttccatcattttgaaaactctacaaattactatccaaacaaaggaattaatctaaaaggatttgaattctctcaaatcattaca 33310839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 2057466 - 2057400
Alignment:
Q  76 tcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  2057466 tcacctcaaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacac 2057400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 40110812 - 40110742
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| || ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  40110812 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 40110742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 41443028 - 41443078
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaa 66  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||||||||    
T  41443028 atactttataaatttccatcattttgaaaattcttcaaattattatccaaa 41443078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 18926749 - 18926811
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattca 78  Q
    ||||||||||||||||||||||||| ||| || |||||| ||| |||||||||| | ||||||    
T  18926749 atacttcataaatttccatcattttgaaattttttcaaattatcatccaaacaatgaaattca 18926811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 21635960 - 21636038
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaaca 141  Q
    |||||||  ||||||| ||||| ||| || ||||||||||||||||||||||| ||| ||| ||| | |||||||||||    
T  21635960 caaacaatagaattcatctcaaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 29195768 - 29195714
Alignment:
Q  88 atttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||| ||||| ||||||||||||||||  ||| ||||||||||||||||||||||    
T  29195768 atttaaattctttcaaaacattacattacctcaaaatattcctccatccaaacac 29195714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 29639187 - 29639269
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| ||||||||||||||  |||||||||| | ||| |||||||||||| ||  ||| ||||| ||||||| ||||    
T  29639187 atccaaacaatggaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacac 29639269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 43955592 - 43955522
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| || || ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  43955592 gaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 43955522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 43955598 - 43955668
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||| ||||| || ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  43955598 gaatgcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 43955668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 44915270 - 44915200
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| ||| ||| ||||   |||||||||||    
T  44915270 gaattcacctcaaagtagttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacac 44915200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 2057480 - 2057549
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||  | ||| ||||||||| |||||||||||| ||| ||| ||||||||| ||||||||||||    
T  2057480 aattcaccttgaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacac 2057549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 34115580 - 34115701
Alignment:
Q  21 tcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcg 120  Q
    ||||||||||  |||||||||||||||||||||||||| | |||||||| |   || || | || | |||||||||   ||||||||||  |||  |||     
T  34115580 tcataaatttttatcattttaaaaattcttcaaactatcacccaaacaatgaggtttacgtaaaaggatttgaattatctcaaaacattttattaactca 34115679  T
Q  121 aaatattcctccatccaaacac 142  Q
    ||| ||||||||||||||||||    
T  34115680 aaacattcctccatccaaacac 34115701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 46069475 - 46069423
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||  ||||||||||||| ||| ||||||||| ||||||||||||||||    
T  46069475 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattc 46069423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 25536821 - 25536855
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaa 54  Q
    |||||||||||| ||||||||||||||||||||||    
T  25536821 ttcataaatttcaatcattttaaaaattcttcaaa 25536855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 29065903 - 29065973
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||| ||||||||  || ||||||||| |||||||||||||||  ||  ||| ||||||||||||||||||    
T  29065903 gaatccacctcaaaataattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacac 29065973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 6498669 - 6498710
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    |||| ||||||| ||||||||||||||||| |||||||||||    
T  6498669 aatttacctcaaagtatttgaattccttcataacattacatt 6498710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 34398938 - 34399003
Alignment:
Q  78 acctcaaggtatttgaattc-cttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||| |||||||| | |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacac 34399003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 45967074 - 45967025
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaa 69  Q
    ||||||||||| ||||||||||||||||||  ||| ||| ||||||||||    
T  45967074 ttcataaattttcatcattttaaaaattctcaaaattatcatccaaacaa 45967025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 49052860 - 49052912
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||  |||||||||| || ||| ||||||||| ||||||||||||||||    
T  49052860 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattc 49052912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 19324 - 19203
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| |||||| ||||||||||||||  |||||||||||| |||||||||||||||| |||    
T  19324 ttcataaatttccatcatttttaaaattcttcaaattattatcgaaacaatggaattcacctcaaaatatttgaattcc-tcaaaacattacattccctc 19226  T
Q  120 gaaatattcctccatccaaacac 142  Q
     ||||| ||| ||||||||||||    
T  19225 aaaatactcccccatccaaacac 19203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 19727 - 19852
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| ||| || | |||||||||||| |||||||||||   | ||||||||||||||    
T  19727 atacttcataaatttccatcattttgaaaattcttcaaattattatctaaataatgtaattcacctcaaagtatttgaattttcttaaaacattacattc 19826  T
Q  116 tctcgaaatattcctccatccaaacac 142  Q
     ||| ||| | ||| ||||||||||||    
T  19827 cctcaaaaca-tcccccatccaaacac 19852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 28918292 - 28918170
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||| | |||||||||||| ||||||||||| | | |||||||||||||| |||    
T  28918292 ttcataaatttccatcattttgaaaatccttcaaattattatccaaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattccctc 28918193  T
Q  120 gaaatattcctccatccaaacac 142  Q
     ||| ||||||||||||||||||    
T  28918192 aaaacattcctccatccaaacac 28918170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 9697593 - 9697494
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||    
T  9697593 atacttcataaattttcatcattttgaaaattcatcaaactattatccaaacaatggaattcacatcaaagtatttgaattccttcaaaacatcacattc 9697494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 1368604 - 1368482
Alignment:
Q  20 ttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctc 119  Q
    ||||||||||||||||||||| ||||| ||||| | ||||||||||||||  |||||||||||||   ||||||||||| | |||| |||||||||||||    
T  1368604 ttcataaatttccatcattttgaaaatccttcatattattatccaaacaatagaattcacctcaaaacatttgaattcccttaaaatattacattctctc 1368505  T
Q  120 gaaatattcctccatccaaacac 142  Q
     ||| ||||||||||||||||||    
T  1368504 aaaacattcctccatccaaacac 1368482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 31413032 - 31412940
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||  |||| ||||||||||||| |||||||||    
T  31413032 atacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcatatcaaagtatttgaattccctcaaaacat 31412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 1195464 - 1195371
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||| |||||||||||||| ||||||||| ||| ||||||||||    
T  1195464 atacttcataaatttccataattttgaaaattcttcaaattattatctaaacaatggaattcacctcaaagtatttgaaatccctcaaaacatt 1195371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 8475292 - 8475199
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacatt 109  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| ||||||||||  || ||||||||||||| ||||||||||    
T  8475292 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcacccaaaagtatttgaattccctcaaaacatt 8475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 15616303 - 15616385
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattcc 98  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||  |||||||||||||  ||||| ||||||    
T  15616303 atacttcataaatttgcatcattttaaaaattctttaaattattatccaaacaatagaattcacctcaaaatatttaaattcc 15616385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 34244966 - 34245048
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| |||||| || |||| ||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  34244966 atccaaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacac 34245048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 29889420 - 29889502
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| || ||||||||| |||| ||||||||||||| ||||||||||||||||  || ||| ||||||||||||||||||    
T  29889420 atccaaataatggaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacac 29889502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 6358200 - 6358291
Alignment:
Q  23 ataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    |||||||||||| ||||| ||||||||||||| |||||| | |||||  ||||||||| ||| |||||| |||||  |||||||||||||||    
T  6358200 ataaatttccattattttgaaaattcttcaaattattattctaacaatagaattcaccacaaagtatttaaattctctcaaaacattacatt 6358291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 10105177 - 10105118
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaaca 68  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  10105177 gaataaaatacttcatacatttccatcattttaaaaatgcttcaaattattatccaaaca 10105118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 6919783 - 6919713
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||  ||||||||||||||||||    
T  6919783 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacac 6919713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 26901706 - 26901804
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    |||||||||||||||| |||||||||||||||||  ||| |||  ||| ||||| | ||||||||| ||  |||||||||||| |||||| ||||||||    
T  26901706 atacttcataaatttctatcattttaaaaattctcaaaattatcctccgaacaatgaaattcacctaaaattatttgaattccctcaaaatattacatt 26901804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 15299510 - 15299578
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||| ||| ||||| ||||||||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacattcc-ccatccaaacac 15299578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 142
Target Start/End: Complemental strand, 15832576 - 15832471
Alignment:
Q  37 ttttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatcc 136  Q
    |||| ||||| ||||||| || ||||||||||| | |||||||| ||| ||||||||||||| | ||||||||||||||  |||||| ||| |  |||||    
T  15832576 ttttgaaaatacttcaaattagtatccaaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatcc 15832477  T
Q  137 aaacac 142  Q
    ||||||    
T  15832476 aaacac 15832471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 9285731 - 9285652
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||| ||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  9285731 caaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 9285652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 10737668 - 10737786
Alignment:
Q  23 ataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaa 122  Q
    ||||||||| |||||||| |||||||| |||||||| ||| |||||| | |||| |||| || | |||| |||||| || ||| | || |||  ||||||    
T  10737668 ataaatttctatcattttgaaaattctccaaactatcatcaaaacaatgaaatttacctaaaagaatttaaattccctcgaaaaaatatattacctcgaa 10737767  T
Q  123 atattcctccatccaaaca 141  Q
    | |||||||||||||||||    
T  10737768 acattcctccatccaaaca 10737786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 13487362 - 13487280
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| | |||||||||||| ||||||||||||| ||| |||| ||||||| ||| ||| ||||| ||||| ||||||    
T  13487362 atccaaacaatgaaattcacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacac 13487280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 9763114 - 9763166
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||||||  ||| ||||||||||||||||||||||    
T  9763114 ttgaattccctcaaaacattacattacctcaaaatattcctccatccaaacac 9763166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 9763096 - 9763017
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||| | || |||||||||    
T  9763096 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacac 9763017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 34364830 - 34364775
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    |||||||||| |||||||||||||| |||||| |||||| ||| ||||||||||||    
T  34364830 atccaaacaatggaattcacctcaaagtatttaaattccctcataacattacattc 34364775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 15299471 - 15299412
Alignment:
Q  75 ttcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccat 134  Q
    |||||||||| ||| ||||||||  |||||||||||||||| ||| ||| ||||||||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctcaaaacattcctccat 15299412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 29889352 - 29889393
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    |||| ||||||| ||||||||||||||||| |||||||||||    
T  29889352 aattaacctcaaagtatttgaattccttcataacattacatt 29889393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 413623 - 413691
Alignment:
Q  23 ataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtattt 91  Q
    |||||||| ||| |||||||||||| |||||| ||||||  ||| || | |||||||||||| ||||||    
T  413623 ataaattttcattattttaaaaattattcaaattattataaaaaaaatgaaattcacctcaaagtattt 413691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 6919809 - 6919861
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||| ||| ||| ||| ||||| ||||||||||||    
T  6919809 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacac 6919861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 8574752 - 8574700
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||||||| ||| ||| ||| | ||||||||||||    
T  8574752 ttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacac 8574700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 8574767 - 8574819
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||||||| ||| ||| ||| | ||||||||||||    
T  8574767 ttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacac 8574819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 7289 - 7156
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| ||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||  ||| ||||||||||||| | ||||||     
T  7289 gaataaaatacttcgtaaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcactccaaagtatttgaattcccttaaaacaa 7190  T
Q  109 tacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||| ||| ||| ||||||||||||||||||    
T  7189 tacattccctcaaaacattcctccatccaaacac 7156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 4440 - 4571
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| |||  |||||||||| | ||||||||||| ||||    
T  4440 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattc 4539  T
Q  116 tctcgaaatattcctccatccaaacactctca 147  Q
     ||| ||| |||||  ||||||||||| ||||    
T  4540 cctcaaaacattccctcatccaaacacactca 4571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 5084 - 5215
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| |||  |||||||||| | ||||||||||| ||||    
T  5084 atacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattc 5183  T
Q  116 tctcgaaatattcctccatccaaacactctca 147  Q
     ||| ||| |||||  ||||||||||| ||||    
T  5184 cctcaaaacattccctcatccaaacacactca 5215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 15805 - 15905
Alignment:
Q  13 aatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattaca 112  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||  | ||||||||||||  ||| | |||||||    
T  15805 aatatacttcataaattcccatcattttgaaaattcttcaaattattatccaaacaatggaattcacct--aagtatttgaattctctcatagcattaca 15902  T
Q  113 ttc 115  Q
    |||    
T  15903 ttc 15905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 16316 - 16396
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaatt 96  Q
    |||||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||  ||||||||||    
T  16316 atactttataaatttccatcattttaaaaattcttcaaatgattatccaaacaatggaatttacctcaaaatatttgaatt 16396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 2847 - 2947
Alignment:
Q  13 aatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattaca 112  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||  | ||||||||||||  ||| | |||||||    
T  2847 aatatacttcataaattcccatcattttgaaaattcttcaaattattatccaaacaatggaattcacct--aagtatttgaattctctcatagcattaca 2944  T
Q  113 ttc 115  Q
    |||    
T  2945 ttc 2947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 9528 - 9609
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattc 97  Q
    |||||| |||||||||||||||||| |||||||||||||  ||||||||||||| |||||| ||||||| ||||||||||||    
T  9528 atactttataaatttccatcattttgaaaattcttcaaatgattatccaaacaatggaatttacctcaaagtatttgaattc 9609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 50250 - 50331
Alignment:
Q  17 tacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattcc 98  Q
    |||||||||||||||||||||||| |||| |||||||| |||||| ||||||| ||||||||| |||| |||||||||||||    
T  50250 tacttcataaatttccatcattttgaaaactcttcaaattattattcaaacaatggaattcacatcaaagtatttgaattcc 50331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 109168 - 109069
Alignment:
Q  9 gaataatatacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacat 108  Q
    |||||| |||||| ||||||||| |||||||| ||||||||||||| | |||||||||||| ||||||||| |||| |||||| |||||| |||||||||    
T  109168 gaataaaatactttataaatttc-atcattttgaaaattcttcaaattcttatccaaacaatggaattcacatcaaagtatttaaattccctcaaaacat 109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 221138 - 221236
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    ||||||||||||||||||||||||| ||||| | ||||| ||||||||||| || | |||||||| |||  |||||||||||| | |||||||||||||    
T  221138 atacttcataaatttccatcattttgaaaatacatcaaattattatccaaataatgaaattcaccccaaaatatttgaattcccttaaaacattacatt 221236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 223691 - 223755
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacc 80  Q
    ||||||||||||||||||||||||| ||||| | ||||| ||||||||||| || | ||||||||    
T  223691 atacttcataaatttccatcattttgaaaatacatcaaattattatccaaataatgaaattcacc 223755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 10973 - 10886
Alignment:
Q  60 atccaaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacactctca 147  Q
    |||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||| ||  ||| |||| ||||| ||||||| ||||    
T  10973 atccaaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattcttccattcaaacacactca 10886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 11324 - 11283
Alignment:
Q  73 aattcacctcaaggtatttgaattccttcaaaacattacatt 114  Q
    |||| ||||||| ||||||||||||||||| |||||||||||    
T  11324 aatttacctcaaagtatttgaattccttcataacattacatt 11283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 42072 - 42002
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||| ||| ||| |||||||||| |||||||    
T  42072 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacac 42002  T

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Target: scaffold1562 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 493 - 559
Alignment:
Q  76 tcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  493 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 559  T

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Target: scaffold1562; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 462 - 410
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||  ||| ||| ||||||||| ||||||||||||    
T  462 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacac 410  T

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Target: scaffold1158 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 2100 - 2034
Alignment:
Q  76 tcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| ||| ||||||||| |||||||||||||||| ||| ||| ||||| ||||||||||||    
T  2100 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 2034  T

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Target: scaffold1158; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 2131 - 2183
Alignment:
Q  90 ttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    ||||||||| |||||||||||  ||| ||| ||||||||| ||||||||||||    
T  2131 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacac 2183  T

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Target: scaffold0417 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 11898 - 11974
Alignment:
Q  16 atacttcataaatttccatcattttaaaaattcttcaaactattatccaaacaacggaattcacctcaaggtatttg 92  Q
    ||||||||||||||| ||||||||||||| ||| ||||| ||||   ||||||| |||||| ||||||| |||||||    
T  11898 atacttcataaattttcatcattttaaaatttcatcaaattatttaacaaacaatggaatttacctcaatgtatttg 11974  T

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Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 56349 - 56428
Alignment:
Q  63 caaacaacggaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||  |||||||||| || ||| ||||||||| |||||||||||| ||| ||| |||||||||  |||||||||||    
T  56349 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctcaaaatattccctcatccaaacac 56428  T

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Target: scaffold0048 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 83018 - 82948
Alignment:
Q  72 gaattcacctcaaggtatttgaattccttcaaaacattacattctctcgaaatattcctccatccaaacac 142  Q
    |||||||||| || ||| ||||||||| |||||||||||||||| ||| ||| ||||  ||||||||||||    
T  83018 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacac 82948  T

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