View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16727_high_4 (Length: 627)

Name: NF16727_high_4
Description: NF16727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16727_high_4
NF16727_high_4
[»] chr3 (34 HSPs)
chr3 (16-619)||(51836210-51836812)
chr3 (416-537)||(27177404-27177525)
chr3 (464-537)||(50203848-50203921)
chr3 (464-537)||(35011697-35011770)
chr3 (464-537)||(35011904-35011977)
chr3 (414-537)||(38421975-38422096)
chr3 (434-534)||(44145115-44145215)
chr3 (464-539)||(21832680-21832755)
chr3 (415-537)||(10758999-10759121)
chr3 (335-539)||(12799793-12799985)
chr3 (464-534)||(13769285-13769355)
chr3 (372-537)||(9264077-9264242)
chr3 (464-537)||(19820519-19820592)
chr3 (432-537)||(29763687-29763792)
chr3 (335-544)||(40230419-40230627)
chr3 (464-537)||(44573679-44573752)
chr3 (464-537)||(44573976-44574049)
chr3 (416-537)||(50692518-50692639)
chr3 (464-539)||(4191111-4191186)
chr3 (415-537)||(50692314-50692436)
chr3 (481-526)||(1715598-1715643)
chr3 (464-537)||(4029635-4029708)
chr3 (464-537)||(11414403-11414476)
chr3 (464-537)||(21750515-21750588)
chr3 (464-537)||(22407432-22407505)
chr3 (464-537)||(22407639-22407712)
chr3 (472-537)||(24539202-24539267)
chr3 (464-537)||(34715446-34715519)
chr3 (464-537)||(43101362-43101435)
chr3 (468-537)||(44461332-44461401)
chr3 (464-537)||(45443320-45443393)
chr3 (416-536)||(26926900-26927018)
chr3 (505-537)||(46139313-46139345)
chr3 (464-496)||(48685349-48685381)
[»] chr1 (29 HSPs)
chr1 (415-537)||(1233917-1234039)
chr1 (372-536)||(22892680-22892844)
chr1 (461-539)||(22892422-22892500)
chr1 (416-537)||(5222686-5222807)
chr1 (464-537)||(17419827-17419900)
chr1 (464-537)||(21638257-21638330)
chr1 (464-537)||(33879769-33879842)
chr1 (464-537)||(33964413-33964486)
chr1 (461-539)||(22892884-22892962)
chr1 (464-537)||(2697322-2697395)
chr1 (464-537)||(11018894-11018967)
chr1 (416-537)||(38871146-38871267)
chr1 (464-537)||(45403480-45403553)
chr1 (464-543)||(15392144-15392223)
chr1 (464-535)||(24131874-24131945)
chr1 (486-537)||(34076664-34076715)
chr1 (335-537)||(38870940-38871143)
chr1 (466-536)||(27957801-27957871)
chr1 (475-537)||(35926239-35926301)
chr1 (464-537)||(4022116-4022189)
chr1 (464-537)||(8520084-8520157)
chr1 (436-545)||(10017311-10017420)
chr1 (468-537)||(20735566-20735635)
chr1 (464-537)||(31305751-31305824)
chr1 (464-537)||(37600912-37600985)
chr1 (416-537)||(39649075-39649196)
chr1 (464-537)||(43361543-43361616)
chr1 (466-530)||(3774061-3774125)
chr1 (416-496)||(24382392-24382472)
[»] chr6 (31 HSPs)
chr6 (335-537)||(24558699-24558901)
chr6 (416-537)||(15102615-15102737)
chr6 (439-536)||(15293866-15293963)
chr6 (466-542)||(25999065-25999141)
chr6 (466-542)||(26098796-26098872)
chr6 (335-530)||(11316959-11317154)
chr6 (466-537)||(26098590-26098661)
chr6 (348-537)||(15102745-15102931)
chr6 (416-537)||(26098334-26098455)
chr6 (464-537)||(12134474-12134547)
chr6 (416-537)||(25998809-25998930)
chr6 (464-536)||(10733430-10733502)
chr6 (464-537)||(1744833-1744906)
chr6 (372-537)||(11313373-11313538)
chr6 (335-408)||(30526954-30527027)
chr6 (461-533)||(10418333-10418405)
chr6 (372-448)||(18494354-18494430)
chr6 (335-494)||(29742470-29742627)
chr6 (464-535)||(8144057-8144128)
chr6 (423-537)||(30526836-30526951)
chr6 (479-537)||(12124695-12124753)
chr6 (423-537)||(19291909-19292023)
chr6 (432-526)||(23591537-23591631)
chr6 (423-537)||(30539419-30539533)
chr6 (464-537)||(16877001-16877074)
chr6 (464-537)||(17096689-17096762)
chr6 (464-537)||(19054533-19054606)
chr6 (464-533)||(19712604-19712673)
chr6 (464-537)||(24055100-24055173)
chr6 (464-537)||(28149833-28149906)
chr6 (479-535)||(22875131-22875187)
[»] chr7 (30 HSPs)
chr7 (335-496)||(6751537-6751698)
chr7 (423-537)||(13310416-13310530)
chr7 (335-537)||(16565010-16565211)
chr7 (335-537)||(16600451-16600652)
chr7 (416-542)||(33855683-33855809)
chr7 (456-537)||(43565996-43566076)
chr7 (335-537)||(4257991-4258192)
chr7 (461-539)||(40703400-40703478)
chr7 (416-537)||(16564886-16565007)
chr7 (416-537)||(16600655-16600776)
chr7 (464-539)||(29780187-29780262)
chr7 (335-537)||(6813069-6813271)
chr7 (464-537)||(1661182-1661255)
chr7 (434-539)||(40703848-40703953)
chr7 (416-496)||(6751741-6751821)
chr7 (461-536)||(40703644-40703719)
chr7 (372-537)||(6782986-6783151)
chr7 (464-537)||(28910072-28910145)
chr7 (464-537)||(34590568-34590641)
chr7 (465-537)||(8585132-8585204)
chr7 (464-539)||(257256-257331)
chr7 (415-537)||(6813274-6813396)
chr7 (464-530)||(24426792-24426858)
chr7 (464-537)||(12578451-12578524)
chr7 (335-408)||(23821450-23821523)
chr7 (464-537)||(31374805-31374878)
chr7 (335-407)||(258545-258617)
chr7 (416-536)||(33833942-33834061)
chr7 (464-528)||(36092599-36092663)
chr7 (486-534)||(40792806-40792854)
[»] chr4 (34 HSPs)
chr4 (335-537)||(29113360-29113562)
chr4 (418-523)||(20441461-20441566)
chr4 (335-530)||(28245904-28246099)
chr4 (414-537)||(53863895-53864018)
chr4 (464-537)||(56511544-56511617)
chr4 (335-537)||(1922982-1923184)
chr4 (335-481)||(17076987-17077132)
chr4 (464-537)||(56511337-56511410)
chr4 (466-537)||(10390466-10390537)
chr4 (335-408)||(400490-400563)
chr4 (464-537)||(991244-991317)
chr4 (464-537)||(29669354-29669427)
chr4 (464-537)||(29669669-29669742)
chr4 (464-537)||(45427243-45427316)
chr4 (464-537)||(52214655-52214728)
chr4 (464-537)||(53740222-53740295)
chr4 (465-537)||(6778667-6778739)
chr4 (466-529)||(10390675-10390738)
chr4 (414-537)||(25753596-25753719)
chr4 (471-537)||(10390286-10390352)
chr4 (335-369)||(27272746-27272780)
chr4 (464-537)||(990587-990660)
chr4 (464-537)||(13254423-13254496)
chr4 (464-537)||(23018510-23018583)
chr4 (416-537)||(23350791-23350911)
chr4 (464-537)||(27048399-27048472)
chr4 (416-537)||(33629651-33629772)
chr4 (335-408)||(33629775-33629848)
chr4 (464-529)||(35269051-35269116)
chr4 (416-537)||(43943665-43943786)
chr4 (464-537)||(45426927-45427000)
chr4 (464-537)||(51469521-51469594)
chr4 (464-537)||(53386103-53386176)
chr4 (469-537)||(34205984-34206052)
[»] chr8 (22 HSPs)
chr8 (434-539)||(36037200-36037305)
chr8 (423-537)||(36039785-36039899)
chr8 (464-537)||(7621934-7622007)
chr8 (478-537)||(30066036-30066095)
chr8 (416-537)||(10989025-10989146)
chr8 (416-537)||(10989232-10989353)
chr8 (464-537)||(18905896-18905969)
chr8 (464-537)||(20298507-20298580)
chr8 (464-537)||(21085139-21085212)
chr8 (416-537)||(30176455-30176576)
chr8 (464-537)||(32931441-32931514)
chr8 (464-537)||(36997206-36997279)
chr8 (461-537)||(22451385-22451461)
chr8 (464-535)||(34248399-34248470)
chr8 (335-537)||(15010812-15011017)
chr8 (464-534)||(23027822-23027892)
chr8 (464-530)||(42228811-42228877)
chr8 (464-537)||(20760651-20760724)
chr8 (464-537)||(22277564-22277637)
chr8 (464-533)||(34248117-34248186)
chr8 (464-537)||(43599351-43599424)
chr8 (464-537)||(43984307-43984380)
[»] scaffold1138 (1 HSPs)
scaffold1138 (338-537)||(1864-2064)
[»] chr5 (24 HSPs)
chr5 (371-537)||(18914152-18914318)
chr5 (416-537)||(18914359-18914480)
chr5 (416-534)||(20720544-20720662)
chr5 (416-494)||(36878318-36878396)
chr5 (337-539)||(18107745-18107947)
chr5 (466-530)||(2716385-2716449)
chr5 (416-508)||(39268010-39268102)
chr5 (414-533)||(38376721-38376840)
chr5 (416-537)||(13413576-13413697)
chr5 (464-537)||(28358026-28358099)
chr5 (464-537)||(38131804-38131877)
chr5 (416-537)||(39268218-39268339)
chr5 (464-539)||(24918201-24918276)
chr5 (335-481)||(3015464-3015609)
chr5 (415-513)||(10668351-10668449)
chr5 (464-537)||(1028084-1028157)
chr5 (416-537)||(2908760-2908881)
chr5 (464-537)||(4465176-4465249)
chr5 (464-537)||(12965237-12965310)
chr5 (464-537)||(13843737-13843810)
chr5 (464-537)||(24994109-24994182)
chr5 (464-537)||(28156278-28156351)
chr5 (466-526)||(24792124-24792184)
chr5 (486-534)||(30770058-30770106)
[»] chr2 (25 HSPs)
chr2 (335-537)||(32667094-32667296)
chr2 (464-537)||(6183357-6183430)
chr2 (464-537)||(10429779-10429852)
chr2 (464-537)||(41002273-41002346)
chr2 (432-535)||(5721539-5721642)
chr2 (335-539)||(17727313-17727519)
chr2 (467-537)||(39108398-39108468)
chr2 (416-537)||(12431890-12432011)
chr2 (416-537)||(12432097-12432218)
chr2 (464-537)||(21214192-21214265)
chr2 (464-537)||(29684259-29684332)
chr2 (416-537)||(31761124-31761245)
chr2 (464-537)||(42768325-42768398)
chr2 (464-537)||(43195824-43195897)
chr2 (434-526)||(44266310-44266402)
chr2 (434-493)||(10862316-10862375)
chr2 (335-537)||(31761248-31761444)
chr2 (475-537)||(5424773-5424835)
chr2 (416-537)||(8044536-8044658)
chr2 (464-534)||(10849485-10849555)
chr2 (464-533)||(3976466-3976535)
chr2 (464-537)||(23054366-23054439)
chr2 (464-537)||(27545108-27545180)
chr2 (464-536)||(11969092-11969164)
chr2 (505-537)||(15820103-15820135)
[»] scaffold0339 (1 HSPs)
scaffold0339 (423-496)||(15684-15757)
[»] scaffold0785 (1 HSPs)
scaffold0785 (464-523)||(3125-3184)
[»] scaffold1112 (1 HSPs)
scaffold1112 (464-518)||(1245-1299)
[»] scaffold0989 (1 HSPs)
scaffold0989 (464-537)||(2938-3011)
[»] scaffold0032 (1 HSPs)
scaffold0032 (498-535)||(45345-45382)
[»] scaffold0166 (1 HSPs)
scaffold0166 (466-526)||(34507-34567)
[»] scaffold0007 (1 HSPs)
scaffold0007 (416-448)||(193047-193079)


Alignment Details
Target: chr3 (Bit Score: 450; Significance: 0; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 16 - 619
Target Start/End: Complemental strand, 51836812 - 51836210
Alignment:
Q  16 catatgatatatgcgctcatcttctagccttgagtggtcctaaaattcaactaagggactaataactaatcaaaatacaccacattaatctgcttggcca 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51836812 catatgatatatgcgctcatcttctagccttgagtggtcctaaaattcaaataagggactaataactaatcaaaatacaccacattaatctgcttggcca 51836713  T
Q  116 taaccnnnnnnnnnnnnnnnncaccagtactgtagaatctgattcagccatatatgcacatggttgcgtaagtgtgtttgcttacgacgtggctaactag 215  Q
    |||||                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51836712 taaccttttattttgttttttcaccagtactgtagaatctgattcagccatatatgcacatggttgcgtaagtgtgtttgcttacgacgtggctaactag 51836613  T
Q  216 ctatcgagtttcagttaactaattgtttgcggttggtacaagtatatataatgtgcacatagcatccgtggtcttatttttggaatgattcgcccctttt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51836612 ctatcgagtttcagttaactaattgtttgcggttggtacaagtatatataatgtgcacatagcattcgtggtcttatttttggaatgattcgcccctttt 51836513  T
Q  316 cttttagcctcccaaacattggtatcagag-tttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagt 414  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| |||    
T  51836512 cttttaacctcccaaatattggtatcagagttttgtcgaattcaaagatcacctacttattcacgcacaaagcctaaatagtattggacgtgagaagagt 51836413  T
Q  415 atattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataaga 514  Q
     |||||| |||||||||||||||| ||  ||||||| |||||||||||  |||||||||||||||||||||||||||||||| ||  || ||||||||||    
T  51836412 gtattgggaaaaacctaaatcccatattggatagttgagattttttat--gagtttataaataggagacactcctcacctcacaagttggttttataaga 51836315  T
Q  515 atgagttagaccccaaatttcaataaacatgcgaattggttctctttaatttcgatcaagtagttcatgagctcataacaaaaagatattgataatattc 614  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  51836314 atgaattagaccccaaatttcaacaaacatgcgaatcggttctctttaatttcgatcaagtagttcatgagctcataacaaaaagatattgataatattt 51836215  T
Q  615 ttcga 619  Q
    |||||    
T  51836214 ttcga 51836210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 27177404 - 27177525
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||||||||||  ||||| |||||||||||| | ||| | ||||| |||||||||| | | |||||| |||||| ||||||| | | |||| |||| |    
T  27177404 tattggaaaaaactcaaatctcacatcagatagatgagactctttataagagtttatatagatgagacagtcctcatctcataagccggttttgtaagga 27177503  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    ||| |||| |||||||||||||    
T  27177504 tgatttaggccccaaatttcaa 27177525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 50203921 - 50203848
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| |||||| | |||| |||| ||||||||| |||||||||||||    
T  50203921 agagtttataaagaggaggcactcctcaccttataaaccggttttgtaaggatgagttaggccccaaatttcaa 50203848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 35011697 - 35011770
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||| ||||||| |||||||||||||||||| || ||| | |||| |||| ||||||||| |||||||||||||    
T  35011697 agagattataaagaggagacactcctcaccttatgaaccggttttgtaaggatgagttaggccccaaatttcaa 35011770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 35011904 - 35011977
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| || ||| | |||| |||| ||||||||| |||||||||||||    
T  35011904 agagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaggccccaaatttcaa 35011977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 537
Target Start/End: Original strand, 38421975 - 38422096
Alignment:
Q  414 tatattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataag 513  Q
    |||||||| |||||||||| ||||||||| ||||| | ||| | || || ||||||||||  |||||| || | ||||||| | || | |||||| ||||    
T  38421975 tatattgggaaaaacctaagtcccacatcggatagataagactattaataagagtttata--taggaggcagttctcaccttacaagccgattttgtaag 38422072  T
Q  514 aatgagttagaccccaaatttcaa 537  Q
      ||||||||||||||||||||||    
T  38422073 gttgagttagaccccaaatttcaa 38422096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 534
Target Start/End: Complemental strand, 44145215 - 44145115
Alignment:
Q  434 tcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatt 533  Q
    ||||||||||||||| | ||| | || || | |||||||||| |||||||| | ||||||| ||||  || ||||||||| |||| ||||||||||||||    
T  44145215 tcccacatcagatagataagactcttgataatagtttataaagaggagacaatactcaccttataagttggttttataaggatgatttagaccccaaatt 44145116  T
Q  534 t 534  Q
    |    
T  44145115 t 44145115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 539
Target Start/End: Complemental strand, 21832755 - 21832680
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaata 539  Q
    |||||||||||  |||||||| ||||||||| |||  ||| |||| |||| ||||||||| |||||||||||||||    
T  21832755 agagtttataaggaggagacaatcctcaccttatatgctggttttgtaaggatgagttaggccccaaatttcaata 21832680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 537
Target Start/End: Complemental strand, 10759121 - 10758999
Alignment:
Q  415 atattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataaga 514  Q
    |||||| ||||||| ||| | ||||||| ||||| | |||||||| |  ||| | |||||||||||| || | ||||||||| ||   | |||| ||||     
T  10759121 atattgaaaaaaacttaagttccacatcggatagataagatttttgagaagaatatataaataggaggcaattctcacctcacaagtcggttttgtaagg 10759022  T
Q  515 atgagttagaccccaaatttcaa 537  Q
    |||||||||||||||||||||||    
T  10759021 atgagttagaccccaaatttcaa 10758999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 539
Target Start/End: Original strand, 12799793 - 12799985
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||| | ||| ||| ||||| |||||| ||||| ||| ||| |||| | |||  |  ||||||||||||||||  || |    
T  12799793 tggtatcagagcttgtcgaattcaagggtcatctacttatttacgcaccaagcccaaagagtgttggacatga--agggtatattggaaaaaactcaagt 12799890  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||| ||||| |          || |||||||||||| || || || ||||||||| | ||||||||||| || | ||||||||  ||||||||||    
T  12799891 cccacatcggatagat----------ataagagtttataaagagaaggcaatcctcaccttacaaactgattttgtatggatgagttaagccccaaattt 12799980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 13769355 - 13769285
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||||||| ||||| |||||||||||| | || ||| |||| |||| ||||||||| ||||||||||    
T  13769355 agagtttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagttaggccccaaattt 13769285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 537
Target Start/End: Complemental strand, 9264242 - 9264077
Alignment:
Q  372 tattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagttta 471  Q
    ||||||||||| ||||| ||| |||  ||||||||||    || |||||| ||||||| || ||||||||| ||||| | ||| | || |  ||||| ||    
T  9264242 tattcacgcaccaagcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtata 9264143  T
Q  472 taaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||| ||||| || ||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  9264142 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 9264077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 19820592 - 19820519
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||||| ||||||||| | |||| | |||| |||| ||||||||| || ||||||||||    
T  19820592 agagtttataaagaggagacaatcctcaccttacaaaccggttttgtaaggatgagttaggcctcaaatttcaa 19820519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 432 - 537
Target Start/End: Complemental strand, 29763792 - 29763687
Alignment:
Q  432 aatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaa 531  Q
    ||||||||||| ||||| | ||| | || || |||||||||||| |||||||||||| || || || ||| | |||| |||| |||| |||||||| |||    
T  29763792 aatcccacatcggatagataagactcttgataagagtttataaagaggagacactccccatcttatgaaccggttttgtaaggatgaattagaccctaaa 29763693  T
Q  532 tttcaa 537  Q
    ||||||    
T  29763692 tttcaa 29763687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 544
Target Start/End: Complemental strand, 40230627 - 40230419
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    |||||||| || ||||||||||||  |  ||||||  ||||||||||| ||||| ||| |||  ||||||| ||    || |||||| ||||||| || |    
T  40230627 tggtatcaaagcttgtcgaattcaggggccacctacctattcacgcaccaagcccaaagagtgatgggcgttaggggggtgtattgggaaaaacccaagt 40230528  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
     ||||||| ||||| | ||| | || ||||||||||||||| ||||| || ||||||||| |  | | | |||| ||||  |||||||| ||||||||||    
T  40230527 tccacatcggatagatgagactcttgatgagagtttataaagaggag-caatcctcaccttacgagccggttttgtaaggttgagttaggccccaaattt 40230429  T
Q  535 caataaacat 544  Q
    ||| ||||||    
T  40230428 caacaaacat 40230419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 44573679 - 44573752
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  44573679 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 44573752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 44573976 - 44574049
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  44573976 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 44574049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 50692518 - 50692639
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| |||||   ||| | || || |||||||||||| ||||| || ||||||||| | || | | |||| |||| |    
T  50692518 tattgggaaaaacccaagtcccacatcggatagacaagactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 50692617  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||||||||||||    
T  50692618 tgagttaggccccaaatttcaa 50692639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 539
Target Start/End: Complemental strand, 4191186 - 4191111
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaata 539  Q
    |||||||||||| |||||||| |||| |||| | || | | |||| |||| ||||||||| |||||||||||||||    
T  4191186 agagtttataaagaggagacaatcctgaccttacaagccggttttgtaaggatgagttaggccccaaatttcaata 4191111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 537
Target Start/End: Original strand, 50692314 - 50692436
Alignment:
Q  415 atattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataaga 514  Q
    ||||||| ||||||| || ||||||||| |||||   ||| | || |  |||||||||||| ||||| || ||||||||| | || | | |||| ||||     
T  50692314 atattgggaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagg 50692413  T
Q  515 atgagttagaccccaaatttcaa 537  Q
    ||||||||| |||||||||||||    
T  50692414 atgagttaggccccaaatttcaa 50692436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 526
Target Start/End: Original strand, 1715598 - 1715643
Alignment:
Q  481 gacactcctcacctcataaactgattttataagaatgagttagacc 526  Q
    |||||||||||||| || |||||||||| |||| ||||||||||||    
T  1715598 gacactcctcaccttatgaactgattttgtaaggatgagttagacc 1715643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 4029708 - 4029635
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||| ||| || |||||| | |||| | |||| |||| ||||||||| |||||||||||||    
T  4029708 agagtttataaagaggatacaatcttcaccttacaaaccggttttgtaaggatgagttaggccccaaatttcaa 4029635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 11414403 - 11414476
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||||| ||||||||| | || | | |||| |||| ||||||||| || ||||||||||    
T  11414403 agagtttataaagaggagacaatcctcaccttagaagccggttttgtaaggatgagttaggcctcaaatttcaa 11414476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 21750515 - 21750588
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || |   |||| |||| ||||||||| |||||||||||||    
T  21750515 agagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttaggccccaaatttcaa 21750588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 22407505 - 22407432
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||| |||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  22407505 agagtatataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 22407432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 22407712 - 22407639
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||| |||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  22407712 agagtatataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 22407639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 537
Target Start/End: Original strand, 24539202 - 24539267
Alignment:
Q  472 taaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||| |||||||||||||||||| | || | |||||| |||| ||||||||| ||||||| |||||    
T  24539202 taaagaggagacactcctcaccttacaagccgattttgtaaggatgagttaggccccaaacttcaa 24539267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 34715519 - 34715446
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||  |||||||||||||    
T  34715519 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttatgccccaaatttcaa 34715446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 43101435 - 43101362
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | |||  | |||| |||| ||||||| | |||||||||||||    
T  43101435 agagtttataaagaggaggcactcctcaccttacaaatcggttttgtaaggatgagtttggccccaaatttcaa 43101362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 537
Target Start/End: Original strand, 44461332 - 44461401
Alignment:
Q  468 tttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||| |||||||||||||||||| || |||   |||||||||||| |||||  ||| |||||||||    
T  44461332 tttataaagaggagacactcctcaccttatgaaccagttttataagaattagttaagccctaaatttcaa 44461401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 45443320 - 45443393
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| ||||| |||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  45443320 agagtttataaagaggaggcactcttcaccttacaagccggttttttaaggatgagttaggccccaaatttcaa 45443393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 536
Target Start/End: Original strand, 26926900 - 26927018
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||||||||||| |  ||||||||||||||| | ||| | || || |||||||||| | |||||||| ||||||||| || ||| | |||| |||| |    
T  26926900 tattggaaaaaacc-atgtcccacatcagatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaaccggtttt-taagga 26926997  T
Q  516 tgagttagaccccaaatttca 536  Q
    |||||||| || | |||||||    
T  26926998 tgagttaggcctccaatttca 26927018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 46139313 - 46139345
Alignment:
Q  505 ttttataagaatgagttagaccccaaatttcaa 537  Q
    |||| ||||||||||||||||||||||||||||    
T  46139313 ttttgtaagaatgagttagaccccaaatttcaa 46139345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 496
Target Start/End: Complemental strand, 48685381 - 48685349
Alignment:
Q  464 agagtttataaataggagacactcctcacctca 496  Q
    |||||||||||| ||||||||||||||||||||    
T  48685381 agagtttataaagaggagacactcctcacctca 48685349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 3e-22; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 415 - 537
Target Start/End: Original strand, 1233917 - 1234039
Alignment:
Q  415 atattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataaga 514  Q
    ||||||| ||||||| || ||||||||| ||||| | ||| | || ||||||||||||||| |||||||||||||||||||| || ||| |||| | |      
T  1233917 atattggtaaaaacccaagtcccacatcggatagatgagactcttgatgagagtttataaagaggagacactcctcacctcacaagctggttttgtgatg 1234016  T
Q  515 atgagttagaccccaaatttcaa 537  Q
    |||||||||||||||||||||||    
T  1234017 atgagttagaccccaaatttcaa 1234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 536
Target Start/End: Complemental strand, 22892844 - 22892680
Alignment:
Q  372 tattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagttta 471  Q
    |||||| |||| ||||| ||| ||| ||||||||||   | || |||||| ||||||| || |||||||||| |||  | ||| | || |||||| ||||    
T  22892844 tattcatgcaccaagcccaaagagtgttgggcgtgacggaggtgtattgggaaaaacccaagtcccacatcaaataaatgagactcttgatgagacttta 22892745  T
Q  472 taaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttca 536  Q
    |||| |||||||||||||| ||||| || | | |||| |||| ||||||||| ||||||||||||    
T  22892744 taaagaggagacactcctcgcctcacaagccggttttgtaaggatgagttaggccccaaatttca 22892680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 461 - 539
Target Start/End: Complemental strand, 22892500 - 22892422
Alignment:
Q  461 atgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaata 539  Q
    ||||||||||||||| ||||| |||||||||||||| || | | |||| |||| ||||||||| |||||||||||||||    
T  22892500 atgagagtttataaagaggaggcactcctcacctcacaatccggttttgtaaggatgagttaggccccaaatttcaata 22892422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 5222686 - 5222807
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| |||||||||| ||||||||| ||||| | ||| | || || |||||||||  | |||||||| ||||||||| | || | | ||||||||| |    
T  5222686 tattgggaaaaacctaagtcccacatctgatagataagactcttgataagagtttatgtagaggagacaatcctcaccttacaagccggttttataagga 5222785  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||||||    
T  5222786 tgagttagaccctaaatttcaa 5222807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 17419827 - 17419900
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| |||||||||||||||||||||||    
T  17419827 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttagaccccaaatttcaa 17419900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 21638330 - 21638257
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||||||||||||||| | ||  || |||| |||| ||||||||| |||||||||||||    
T  21638330 agagtttataaagaggagacactcctcaccttacaagatggttttgtaaggatgagttaggccccaaatttcaa 21638257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 33879842 - 33879769
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || ||| |||| |||| ||||||||| |||||||||||||    
T  33879842 agagtttataaagaggagccactcctcaccttacaagctggttttgtaaggatgagttaggccccaaatttcaa 33879769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 33964413 - 33964486
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || ||| |||| |||| ||||||||| |||||||||||||    
T  33964413 agagtttataaagaggagccactcctcaccttacaagctggttttgtaaggatgagttaggccccaaatttcaa 33964486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 539
Target Start/End: Complemental strand, 22892962 - 22892884
Alignment:
Q  461 atgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaata 539  Q
    ||||||||||||||| |||||||||||||||||||| || |||  ||| |||| ||| ||||  ||| |||||||||||    
T  22892962 atgagagtttataaagaggagacactcctcacctcacaagctggatttgtaaggatgcgttacgccctaaatttcaata 22892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 2697395 - 2697322
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| | |||||||||||||||||||||    
T  2697395 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggacgagttagaccccaaatttcaa 2697322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 11018894 - 11018967
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||||| || || ||||| |||  |||||| |||| |||||||||||| ||||||||||    
T  11018894 agagtttataaagaggagacaatcttcccctcacaaatcgattttgtaaggatgagttagacctcaaatttcaa 11018967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 38871267 - 38871146
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||||||||| | ||| | || || | |||||||||| ||||| |||||||||||| |  ||| | |||| |||| |    
T  38871267 tattgggaaaaacccaagtcccacatcagatagataagactcttgataaaagtttataaagaggaggcactcctcaccttaagaaccggttttgtaagga 38871168  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    || ||||| || ||||||||||    
T  38871167 tgcgttaggcctcaaatttcaa 38871146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 45403480 - 45403553
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || ||| |||| |||| ||||||||| || ||||||||||    
T  45403480 agagtttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagttaggcctcaaatttcaa 45403553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 543
Target Start/End: Original strand, 15392144 - 15392223
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaataaaca 543  Q
    ||||| |||||| ||||| || ||||||||| | || | |||||| |||| ||||||||| ||||||||||||| |||||    
T  15392144 agagtatataaagaggaggcaatcctcaccttacaagccgattttgtaaggatgagttaggccccaaatttcaacaaaca 15392223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 535
Target Start/End: Complemental strand, 24131945 - 24131874
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttc 535  Q
    |||||||||||| ||||| || |||||| || | || |   |||||||||||||||||||||||||||||||    
T  24131945 agagtttataaagaggaggcaatcctcaacttacaagccagttttataagaatgagttagaccccaaatttc 24131874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 537
Target Start/End: Original strand, 34076664 - 34076715
Alignment:
Q  486 tcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||||    
T  34076664 tcctcacttcacaaaccgattttataaggatgagttaggccccaaatttcaa 34076715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 537
Target Start/End: Complemental strand, 38871143 - 38870940
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatatt-ggaaaaaacctaaa 433  Q
    ||||||||||| ||||||||||||| |  ||||||  ||| ||||||| ||||| ||| |||  ||| ||||||    || |||| ||||||| || ||     
T  38871143 tggtatcagagcttgtcgaattcaagggccacctacctatccacgcaccaagcccaaagagtgctggacgtgaggggggtgtattgggaaaaaccccaag 38871044  T
Q  434 tcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatt 533  Q
    ||||||||||||| | | ||| | || || | ||||||||||  |||| |||||||||||| |  ||| | |||| |||| ||||||||| || ||||||    
T  38871043 tcccacatcagatcgataagactcttgataaaagtttataaagtggaggcactcctcaccttaagaaccggttttgtaaggatgagttaggcctcaaatt 38870944  T
Q  534 tcaa 537  Q
    ||||    
T  38870943 tcaa 38870940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 27957871 - 27957801
Alignment:
Q  466 agtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttca 536  Q
    |||||||||| ||||||| |||||||||  | || | | |||| |||| ||||||||||||||||||||||    
T  27957871 agtttataaagaggagacgctcctcaccgtacaagccggttttgtaaggatgagttagaccccaaatttca 27957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 537
Target Start/End: Complemental strand, 35926301 - 35926239
Alignment:
Q  475 ataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||||| |||||||||||| | || ||| |||| |||| ||||||||| |||||||||||||    
T  35926301 ataggaggcactcctcaccttacaagctggttttgtaaggatgagttaggccccaaatttcaa 35926239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 4022189 - 4022116
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || |   |||| |||| ||||||||| |||||||||||||    
T  4022189 agagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttaggccccaaatttcaa 4022116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 8520157 - 8520084
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| | ||| |||||||||||| | || | | |||| |||  |||||||||||||||||||||||    
T  8520157 agagtttataaagaagaggcactcctcaccttacaagccggttttgtaaagatgagttagaccccaaatttcaa 8520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 545
Target Start/End: Complemental strand, 10017420 - 10017311
Alignment:
Q  436 ccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttc 535  Q
    ||||||||||||| | ||| | || || |||||||||||| ||||  |||||||||||| || ||| |||||| || |  | |||||| ||| |||||||    
T  10017420 ccacatcagatagataagactcttgataagagtttataaagaggaagcactcctcaccttatgaaccgattttgtacggctaagttaggccctaaatttc 10017321  T
Q  536 aataaacatg 545  Q
    ||| ||||||    
T  10017320 aatcaacatg 10017311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 537
Target Start/End: Original strand, 20735566 - 20735635
Alignment:
Q  468 tttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  20735566 tttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 20735635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 31305751 - 31305824
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| | |||||||||||    
T  31305751 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggctccaaatttcaa 31305824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 37600912 - 37600985
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||| | |||||||||||| |||| | | |||| |||| ||||||||  |||||||||||||    
T  37600912 agagtttataaagaggcggcactcctcaccttataagccggttttgtaaggatgagttaagccccaaatttcaa 37600985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 39649196 - 39649075
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| ||||| | ||| | || |  |||||||||||| ||||| || ||||||||| | || | | |||| |||| |    
T  39649196 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 39649097  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||  |||||||||||||    
T  39649096 tgagttatgccccaaatttcaa 39649075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 43361616 - 43361543
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| || ||||||||| | || | | |||| |||| |||||||||||||| ||||||||    
T  43361616 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttagacccccaatttcaa 43361543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 530
Target Start/End: Complemental strand, 3774125 - 3774061
Alignment:
Q  466 agtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaa 530  Q
    |||||||||| |||||||  || |||||| || ||| ||||||||||  ||||||||||||||||    
T  3774125 agtttataaagaggagaccttcttcaccttatgaaccgattttataaagatgagttagaccccaa 3774061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 496
Target Start/End: Complemental strand, 24382472 - 24382392
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctca 496  Q
    |||||| ||||||| |||||| ||||| ||||  | ||| | || ||||||||||||||| ||||| ||||||||| ||||    
T  24382472 tattgggaaaaacccaaatccaacatcggataaatgagactcttgatgagagtttataaagaggaggcactcctcatctca 24382392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 7e-20; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 335 - 537
Target Start/End: Original strand, 24558699 - 24558901
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||  |  ||||||   |||||||||| ||||| ||| |||  |||||||||     || ||||||||||||||||  |    
T  24558699 tggtatcagagcttgtcgaattcatgggccacctaccgattcacgcaccaagcccaaagagtgctgggcgtgacgggggtgtattggaaaaaacctatgt 24558798  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    | |||||| ||||| | ||| | ||||  |||||||||||| |||||||| ||||||||| | || ||| |||| |||| ||||||||| ||||||||||    
T  24558799 ctcacatcggatagataagactctttagaagagtttataaagaggagacaatcctcaccttacaagctggttttgtaaggatgagttaggccccaaattt 24558898  T
Q  535 caa 537  Q
    |||    
T  24558899 caa 24558901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 15102737 - 15102615
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaa-ctgattttataaga 514  Q
    |||||| ||||||| || |||||||||| |||| | ||| | || ||||||||||||||| ||||| |||||||||| ||| ||| | | |||| ||||     
T  15102737 tattgggaaaaacccaagtcccacatcaaatagatgagactcttgatgagagtttataaagaggaggcactcctcacttcacaaagccggttttgtaagg 15102638  T
Q  515 atgagttagaccccaaatttcaa 537  Q
    |||||||||||||||||||||||    
T  15102637 atgagttagaccccaaatttcaa 15102615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 439 - 536
Target Start/End: Complemental strand, 15293963 - 15293866
Alignment:
Q  439 catcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttca 536  Q
    |||||||||| ||||||| || |||||||||||||||   |||||| ||||||||||| || | | ||||||||| |||| |||||||||||||||||    
T  15293963 catcagatagattagattcttgatgagagtttataaagcagagacattcctcacctcacaagccggttttataaggatgaattagaccccaaatttca 15293866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 466 - 542
Target Start/End: Original strand, 25999065 - 25999141
Alignment:
Q  466 agtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaataaac 542  Q
    |||||||||| |||||||||||||||||| || ||| | |||| |||||||||||||| ||||||||||||| ||||    
T  25999065 agtttataaagaggagacactcctcaccttatgaaccggttttgtaagaatgagttaggccccaaatttcaacaaac 25999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 466 - 542
Target Start/End: Original strand, 26098796 - 26098872
Alignment:
Q  466 agtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaataaac 542  Q
    |||||||||| |||||||||||||||||| || ||| | |||| |||||||||||||| ||||||||||||| ||||    
T  26098796 agtttataaagaggagacactcctcaccttatgaaccggttttgtaagaatgagttaggccccaaatttcaacaaac 26098872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 530
Target Start/End: Original strand, 11316959 - 11317154
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||| |  ||||||  ||||||||||| ||||| ||| |||  ||||||||||    || |||||| ||||||| || |    
T  11316959 tggtatcagagcttgtcgaattcaagggccacctacctattcacgcaccaagcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagt 11317058  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaa 530  Q
    |||||||| ||||| | | | | || ||||||||||||||| ||| | |||||||||| ||| || | | |||| ||||  |||||||| ||||||    
T  11317059 cccacatcggatagatgaaactcttgatgagagtttataaagagggggcactcctcacttcacaagccggttttgtaaggttgagttagcccccaa 11317154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 466 - 537
Target Start/End: Original strand, 26098590 - 26098661
Alignment:
Q  466 agtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||| |||||||||||||||||| || ||| | |||| |||||||||||||| |||||||||||||    
T  26098590 agtttataaagaggagacactcctcaccttatgaaccgcttttgtaagaatgagttaggccccaaatttcaa 26098661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 348 - 537
Target Start/End: Complemental strand, 15102931 - 15102745
Alignment:
Q  348 tgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaatcccacatcagata 447  Q
    |||||||||||| |  ||||||   |||||||||| || || ||| ||| |||||||||| |   || |||||| ||||||| || ||| ||||||||||    
T  15102931 tgtcgaattcaagggccacctaccgattcacgcaccaaacccaaagagtgttgggcgtgacaggggtgtattgggaaaaacccaagtcc-acatcagata 15102833  T
Q  448 gtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    | | ||| | || ||||||||||||||| ||||| |||||||||| ||| |||| | |||| |||| ||||||  |||||||||||||||    
T  15102832 gatgagactcttgatgagagtttataaagaggagtcactcctcacttcacaaaccggttttgtaaggatgagt--gaccccaaatttcaa 15102745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 26098334 - 26098455
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| ||||| | ||| |  | || | |||||||||| |||||||||||||||||| || ||| | |||| |||| |    
T  26098334 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccgcttttgtaagga 26098433  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||||||||||||    
T  26098434 tgagttaggccccaaatttcaa 26098455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 12134547 - 12134474
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||||||||||| |||| | |||| | |||| |||| ||||||||| |||||||||||||    
T  12134547 agagtttataaagaggagacactcctaaccttacaaaccggttttgtaaggatgagttaggccccaaatttcaa 12134474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 25998809 - 25998930
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| ||||| | ||| |  | || | |||||||||| |||||||||||||||||| || ||| | |||| |||| |    
T  25998809 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccgcttttgtaagga 25998908  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    ||| |||| |||||||||||||    
T  25998909 tgatttaggccccaaatttcaa 25998930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 536
Target Start/End: Complemental strand, 10733502 - 10733430
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttca 536  Q
    |||||||||||| |||||||||||||||||| | || | | |||| |||| ||||||||| ||||||||||||    
T  10733502 agagtttataaagaggagacactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttca 10733430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 1744906 - 1744833
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  1744906 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 1744833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 537
Target Start/End: Complemental strand, 11313538 - 11313373
Alignment:
Q  372 tattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagttta 471  Q
    ||||||||||| ||||| ||| |||  ||||||||||    || |||||| ||||||| |||||||||||| ||||| | ||| | || |  ||||| ||    
T  11313538 tattcacgcaccaagcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaaatcccacatcggatagataagactcttgagaagagtata 11313439  T
Q  472 taaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||| ||||| || ||||||||| | || |   |||| |||| ||||||||| |||||||||||||    
T  11313438 taaagaggaggcaatcctcaccttacaagccagttttgtaaggatgagttaggccccaaatttcaa 11313373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 30526954 - 30527027
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgag 408  Q
    ||||||||||||||||||||||||| |  ||||||  ||||||||||| ||||| ||| ||| |||| ||||||    
T  30526954 tggtatcagagtttgtcgaattcaagggacacctaactattcacgcaccaagcccaaagagtgttggacgtgag 30527027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 533
Target Start/End: Complemental strand, 10418405 - 10418333
Alignment:
Q  461 atgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatt 533  Q
    ||||||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||    
T  10418405 atgagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatt 10418333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 448
Target Start/End: Complemental strand, 18494430 - 18494354
Alignment:
Q  372 tattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaatcccacatcagatag 448  Q
    ||||||||||| ||||||||| |||  ||||||||||    || |||||| ||||||| ||||||||||||||||||    
T  18494430 tattcacgcaccaagcctaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaaatcccacatcagatag 18494354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 494
Target Start/End: Complemental strand, 29742627 - 29742470
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||| |  ||| ||  ||||||||||| ||||| ||| ||| |||||||||||    || |||| | |||||| ||| |    
T  29742627 tggtatcagagcttgtcgaattcaagggccacttacctattcacgcaccaagcccaaagagtgttgggcgtgaggggggtgtattaggaaaaacttaagt 29742528  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacct 494  Q
    |||||||| |||  || ||| | || |||| |||||||||| ||||| || |||||||||    
T  29742527 cccacatcggat--ttaagactcttgatgaaagtttataaagaggaggcaatcctcacct 29742470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 535
Target Start/End: Original strand, 8144057 - 8144128
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttc 535  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||    
T  8144057 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttc 8144128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 537
Target Start/End: Original strand, 30526836 - 30526951
Alignment:
Q  423 aaaaacctaaa-tcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagtt 521  Q
    ||||||||||| ||||||||| ||||| | ||| | || ||||||||||||||| ||| |  ||||||||| ||| || ||| |||| ||||  ||||||    
T  30526836 aaaaacctaaagtcccacatcggatagatgagactcttgatgagagtttataaagagggggaactcctcacttcacaagctggttttgtaaggttgagtt 30526935  T
Q  522 agaccccaaatttcaa 537  Q
    || |||| ||||||||    
T  30526936 aggcccccaatttcaa 30526951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 537
Target Start/End: Complemental strand, 12124753 - 12124695
Alignment:
Q  479 gagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||||||||||| || | || |||||||| |||| ||||||||| |||||||||||||    
T  12124753 gagacactcctcatcttacaagctgattttgtaaggatgagttaggccccaaatttcaa 12124695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 537
Target Start/End: Complemental strand, 19292023 - 19291909
Alignment:
Q  423 aaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagtta 522  Q
    ||||||| || ||||||||| ||||| | ||| | || || ||||||| || | |||||||| ||||||||| ||||  || |||| |||| ||||||||    
T  19292023 aaaaaccaaagtcccacatcggatagataagactcttgataagagtttgtatagaggagacaatcctcaccttataagttggttttgtaaggatgagtta 19291924  T
Q  523 gaccccaaatttcaa 537  Q
    | | |||||||||||    
T  19291923 ggctccaaatttcaa 19291909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 526
Target Start/End: Original strand, 23591537 - 23591631
Alignment:
Q  432 aatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagacc 526  Q
    ||||||||||||||||| | ||||| || |  | |||||||| | ||||||||||| |||||| | || | |||||| |||| ||||||||||||    
T  23591537 aatcccacatcagatagataagattcttgagaaaagtttatataaaggagacactcttcaccttacaagccgattttgtaaggatgagttagacc 23591631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 537
Target Start/End: Original strand, 30539419 - 30539533
Alignment:
Q  423 aaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagtta 522  Q
    ||||||| || ||||||||| ||||| | ||| |||| || ||||||||||||   ||| ||||||||| || |||| | | |||| |||| ||| ||||    
T  30539419 aaaaacccaagtcccacatcggatagataagacttttgataagagtttataaaggtgaggcactcctcatcttataacccggttttgtaaggatgggtta 30539518  T
Q  523 gaccccaaatttcaa 537  Q
    | |||||||||||||    
T  30539519 ggccccaaatttcaa 30539533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 16877074 - 16877001
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| || ||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  16877074 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 16877001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 17096762 - 17096689
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||| ||||||| ||  | || | | |||| |||| |||||||||||||||||||||||    
T  17096762 agagtttataaagaggagaaactcctcgccgtacaagccggttttgtaaggatgagttagaccccaaatttcaa 17096689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 19054533 - 19054606
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| | ||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  19054533 agagtttataaagatgaggcactcctcaccttacaagccggttttgtaaggatgagttagtccccaaatttcaa 19054606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 533
Target Start/End: Complemental strand, 19712673 - 19712604
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatt 533  Q
    |||||||||||| ||||| || ||||||||| | || ||| |||| |||| ||||||||| |||||||||    
T  19712673 agagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggccccaaatt 19712604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 24055173 - 24055100
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| | ||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  24055173 agagtttataaagacgaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 24055100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 28149833 - 28149906
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| || ||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  28149833 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 28149906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 535
Target Start/End: Complemental strand, 22875187 - 22875131
Alignment:
Q  479 gagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttc 535  Q
    |||||||||||||||| ||||   | |||| |||||||||||||||||| |||||||    
T  22875187 gagacactcctcaccttataagtcggttttgtaagaatgagttagaccctaaatttc 22875131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 3e-19; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 496
Target Start/End: Complemental strand, 6751698 - 6751537
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||| | |||||||  ||||||||||| ||||| ||| |||  ||||||||||    || |||||| ||||||| || |    
T  6751698 tggtatcagagcttgtcgaattcaagggtcacctacctattcacgcaccaagcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagt 6751599  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctca 496  Q
    |||| ||| ||||| | ||| | || ||||||||||| ||| ||||| ||||||||||||||    
T  6751598 cccaaatcggatagatgagactcttgatgagagtttacaaagaggaggcactcctcacctca 6751537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 423 - 537
Target Start/End: Complemental strand, 13310530 - 13310416
Alignment:
Q  423 aaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagtta 522  Q
    ||||||| || |||||| |||||||| | ||| | || | ||||||||||||| |||||||||||||||| ||| |||| | |||| |||| ||||||||    
T  13310530 aaaaacccaagtcccacgtcagatagatgagactcttgacgagagtttataaagaggagacactcctcacttcacaaaccggttttgtaaggatgagtta 13310431  T
Q  523 gaccccaaatttcaa 537  Q
    | |||||||||||||    
T  13310430 ggccccaaatttcaa 13310416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 537
Target Start/End: Original strand, 16565010 - 16565211
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| || |||||||||| |  ||||||   || |||| || ||||| ||| ||| |||||||||||    || |||||| ||||||| || |    
T  16565010 tggtatcagagcttatcgaattcaagggccacctaccaatccacggaccaagcccaaagagtgttgggcgtgagggg-gtgtattgggaaaaacccaagt 16565108  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||| ||||| | ||| | || || |||||||||||||||||| |||||||||||| || ||| |||||| || | ||||||||| || |||||||    
T  16565109 cccacatcggatagataagactcttgataagagtttataaataggaggcactcctcaccttatgaaccgattttttacggatgagttaggcctcaaattt 16565208  T
Q  535 caa 537  Q
    |||    
T  16565209 caa 16565211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 537
Target Start/End: Complemental strand, 16600652 - 16600451
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| || |||||||||| |  ||||||   || |||| || ||||| ||| ||| |||||||||||    || |||||| ||||||| || |    
T  16600652 tggtatcagagcttatcgaattcaagggccacctaccaatccacggaccaagcccaaagagtgttgggcgtgagggg-gtgtattgggaaaaacccaagt 16600554  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||| ||||| | ||| | || || |||||||||||||||||| |||||||||||| || ||| |||||| || | ||||||||| || |||||||    
T  16600553 cccacatcggatagataagactcttgataagagtttataaataggaggcactcctcaccttatgaaccgattttttacggatgagttaggcctcaaattt 16600454  T
Q  535 caa 537  Q
    |||    
T  16600453 caa 16600451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 416 - 542
Target Start/End: Original strand, 33855683 - 33855809
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| ||||| | ||| |  | || | |||||||||| |||||||||||||||||| || ||| | |||| ||||||    
T  33855683 tattgggaaaaacccaagtcccacatcggatagataagactcatgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaagaa 33855782  T
Q  516 tgagttagaccccaaatttcaataaac 542  Q
    |||||||| ||||||||||||| ||||    
T  33855783 tgagttaggccccaaatttcaacaaac 33855809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 456 - 537
Target Start/End: Original strand, 43565996 - 43566076
Alignment:
Q  456 tttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||| ||||||||||||||| ||| |||||||||||||| |||| | |||||| |||||||| |||||||||||||||||||    
T  43565996 ttttgatgagagtttataaa-aggtgacactcctcaccttataagccgattttgtaagaatgggttagaccccaaatttcaa 43566076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 335 - 537
Target Start/End: Complemental strand, 4258192 - 4257991
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||| |  ||||||  ||| |||| || ||||| ||| ||| |||||||||||    || |||||| ||||||| || |    
T  4258192 tggtatcagagcttgtcgaattcaagggccacctacctatccacgtaccaagcccaaagagtgttgggcgtgagggg-gtgtattgggaaaaacccaagt 4258094  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    | |||||| ||||| | ||| | || || ||||||||| |||||||| |||||||||||| || |||   |||| |||| ||||||||| || |||||||    
T  4258093 ctcacatcggatagataagactcttgataagagtttatcaataggaggcactcctcaccttatgaaccagttttttaaggatgagttaggcctcaaattt 4257994  T
Q  535 caa 537  Q
    |||    
T  4257993 caa 4257991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 461 - 539
Target Start/End: Complemental strand, 40703478 - 40703400
Alignment:
Q  461 atgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaata 539  Q
    ||||||||||||||| ||||| |||||||||||||| || | | |||| |||| ||||||||| |||||||||||||||    
T  40703478 atgagagtttataaagaggaggcactcctcacctcacaagccggttttgtaaggatgagttaggccccaaatttcaata 40703400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 16564886 - 16565007
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| ||||| | ||| | || || |||||||||||||||||| |||||||||||| || ||| | |||| |||| |    
T  16564886 tattgggaaaaacccaagtcccacatcggatagataagactcttaataagagtttataaataggaggcactcctcaccttatgaaccggttttttaagga 16564985  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| ||  |||||||||    
T  16564986 tgagttaggccttaaatttcaa 16565007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 16600776 - 16600655
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| ||||| | ||| | || || |||||||||||||||||| |||||||||||| || ||| | |||| |||| |    
T  16600776 tattgggaaaaacccaagtcccacatcggatagataagactcttaataagagtttataaataggaggcactcctcaccttatgaaccggttttttaagga 16600677  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| ||  |||||||||    
T  16600676 tgagttaggccttaaatttcaa 16600655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 539
Target Start/End: Original strand, 29780187 - 29780262
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaata 539  Q
    |||||||||||| |||||||||||||||||| | ||   | ||||||||| ||||||||| |||||||||||||||    
T  29780187 agagtttataaagaggagacactcctcaccttacaagtcggttttataaggatgagttaggccccaaatttcaata 29780262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 537
Target Start/End: Complemental strand, 6813271 - 6813069
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||| |  ||||||  ||||||||||| ||||| ||| |||  ||||| |||     || | |||| ||||||  || |    
T  6813271 tggtatcagagcttgtcgaattcaagggccacctacatattcacgcaccaagcccaaagagtgctgggcatgaagggggtgtgttgggaaaaacacaagt 6813172  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||| ||||| |  || | || ||||||||||||||| ||||| ||||||||| |||| || | | |||| | || ||||||||| ||||||||||    
T  6813171 cccacatcggatagatgggactcttgatgagagtttataaagaggaggcactcctcaactcacaagccggttttgtgaggatgagttaggccccaaattt 6813072  T
Q  535 caa 537  Q
    |||    
T  6813071 caa 6813069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 1661255 - 1661182
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||||||||||||| |||||||||||||    
T  1661255 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaagaatgagttaggccccaaatttcaa 1661182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 434 - 539
Target Start/End: Complemental strand, 40703953 - 40703848
Alignment:
Q  434 tcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatt 533  Q
    ||||||||| ||||| | ||| | || ||||||||||||||| |||||||||||||||||||| ||   |  ||| |||| ||||||||  |||||||||    
T  40703953 tcccacatcggatagatgagactcttgatgagagtttataaagaggagacactcctcacctcacaagtcggatttgtaaggatgagttatgccccaaatt 40703854  T
Q  534 tcaata 539  Q
    ||||||    
T  40703853 tcaata 40703848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 496
Target Start/End: Complemental strand, 6751821 - 6751741
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctca 496  Q
    |||||| ||||||| || ||||||||| ||||| | ||||| || ||||||||||| ||| ||||| ||||||||||||||    
T  6751821 tattgggaaaaacccaagtcccacatcggatagatgagattcttgatgagagtttacaaagaggaggcactcctcacctca 6751741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 461 - 536
Target Start/End: Complemental strand, 40703719 - 40703644
Alignment:
Q  461 atgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttca 536  Q
    |||||| |||||||| |||||||||||||||||||| || | | |||| |||| ||||||||| |||| |||||||    
T  40703719 atgagactttataaagaggagacactcctcacctcacaagccggttttgtaaggatgagttaggcccctaatttca 40703644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 537
Target Start/End: Original strand, 6782986 - 6783151
Alignment:
Q  372 tattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagttta 471  Q
    ||||||||||| ||||| ||| |||  ||||||||||    || |||||| ||||||| || || |||||| ||||| | ||| | || |  ||||||||    
T  6782986 tattcacgcaccaagcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagtctcacatcggatagataagactcttgagaagagttta 6783085  T
Q  472 taaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||| ||||| || ||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  6783086 taaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 6783151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 28910072 - 28910145
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  28910072 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttagcccccaaatttcaa 28910145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 34590568 - 34590641
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| || ||| | |||| |||| ||||||||  |||||||||||||    
T  34590568 agagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaagccccaaatttcaa 34590641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 537
Target Start/End: Original strand, 8585132 - 8585204
Alignment:
Q  465 gagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||||||||| |||   |||||||||||| | || ||| |||| |||| |||||||||||||||||||||||    
T  8585132 gagtttataaagagggagcactcctcaccttacaagctggttttgtaaggatgagttagaccccaaatttcaa 8585204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 539
Target Start/End: Complemental strand, 257331 - 257256
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaata 539  Q
    |||||||||||| ||||| |||||||||||| |  | | | |||| |||| ||||||||| |||||||||||||||    
T  257331 agagtttataaagaggaggcactcctcaccttactagccggttttgtaaggatgagttaggccccaaatttcaata 257256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 537
Target Start/End: Complemental strand, 6813396 - 6813274
Alignment:
Q  415 atattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataaga 514  Q
    ||||||| |||| || || |||| |||||||||| |  || | || ||||||||||||||| ||||| |||||||||||||| || | | |||| | ||     
T  6813396 atattgggaaaaccccaagtcccgcatcagatagatgggactcttgatgagagtttataaagaggaggcactcctcacctcacaagccggttttgtgagg 6813297  T
Q  515 atgagttagaccccaaatttcaa 537  Q
    |  |||||| |||||||||||||    
T  6813296 acaagttaggccccaaatttcaa 6813274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 24426792 - 24426858
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaa 530  Q
    |||||||||||| || ||| | ||||||||| ||||||   |||||||||| |||||||||||||||    
T  24426792 agagtttataaagagaagatattcctcaccttataaaccagttttataagagtgagttagaccccaa 24426858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 12578524 - 12578451
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||| ||| ||||| |||||||| ||| | ||   |||||| |||| |||||||||||||||||||||||    
T  12578524 agagtttagaaagaggaggcactcctcgccttacaattcgattttgtaaggatgagttagaccccaaatttcaa 12578451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 23821523 - 23821450
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgag 408  Q
    |||||| |||||||||||||||||| | | |||||  ||||||||||| ||||| ||| |||  ||||||||||    
T  23821523 tggtattagagtttgtcgaattcaagggttacctacctattcacgcaccaagcccaaagagtgatgggcgtgag 23821450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 31374805 - 31374878
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| || ||||||||| | || | | |||| |||| |||||||||||||| ||||||||    
T  31374805 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttagaccccgaatttcaa 31374878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 258545 - 258617
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtga 407  Q
    ||||||||||| ||||||||||||| |  ||||||   |||||||||| ||||| ||| ||| ||||||||||    
T  258545 tggtatcagagcttgtcgaattcaagggccacctaccgattcacgcaccaagcccaaagagtgttgggcgtga 258617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 536
Target Start/End: Original strand, 33833942 - 33834061
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||||||||||| |  ||||||||| ||||| | ||| | || || |||||||||| | |||||||| ||||||||| || ||| | |||| |||| |    
T  33833942 tattggaaaaaacccatgtcccacatcggatagataagactcttgataagagtttatatagaggagacaatcctcaccttatgaaccggtttt-taagga 33834040  T
Q  516 tgagttagaccccaaatttca 536  Q
    |||||||| || | |||||||    
T  33834041 tgagttaggcctccaatttca 33834061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 528
Target Start/End: Complemental strand, 36092663 - 36092599
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagacccc 528  Q
    |||||||||| | ||||| |||||||||||| | || ||| |||| |||| ||||||||||||||    
T  36092663 agagtttatagagaggaggcactcctcaccttacaagctggttttgtaaggatgagttagacccc 36092599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 40792854 - 40792806
Alignment:
Q  486 tcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    ||||||||||| || | |||||| |||| ||||||||||||||||||||    
T  40792854 tcctcacctcacaagccgattttgtaaggatgagttagaccccaaattt 40792806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 537
Target Start/End: Original strand, 29113360 - 29113562
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||  ||||||||||||| |  |||||| | |||||||||| ||||| ||| |||  |||||||||     || |||||| ||||||| |  |    
T  29113360 tggtatcagaacttgtcgaattcaagggccacctactgattcacgcaccaagcccaaagagtgctgggcgtgacgggggtgtattgggaaaaacccatgt 29113459  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||||||||| | ||| | || |  |||||||||||| ||||| || ||||||||| | || ||| |||| |||| ||||||||| ||||||||||    
T  29113460 cccacatcagatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggccccaaattt 29113559  T
Q  535 caa 537  Q
    |||    
T  29113560 caa 29113562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 418 - 523
Target Start/End: Complemental strand, 20441566 - 20441461
Alignment:
Q  418 ttggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatg 517  Q
    |||||||||||| || |||||||| |||||| | ||||| || ||||||||||||||| | ||||||||||| |||||| || ||  ||||||||| |||    
T  20441566 ttggaaaaaacccaagtcccacattagatagatgagattcttaatgagagtttataaagaagagacactccttacctcacaagctagttttataaggatg 20441467  T
Q  518 agttag 523  Q
    ||||||    
T  20441466 agttag 20441461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 530
Target Start/End: Original strand, 28245904 - 28246099
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||| |  ||||||  ||||||||||| || || ||| |||  ||||||||||    || |||||| ||||||| || |    
T  28245904 tggtatcagagcttgtcgaattcaagggccacctacctattcacgcaccaaacccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaagt 28246003  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaa 530  Q
    |||||||| ||||| | ||| | || ||||||||||||||| || || || |||||||||   |||| | |||| |||| ||||||||| ||||||    
T  28246004 cccacatcggatagatgagactcttgatgagagtttataaagagaaggcaatcctcaccttgcaaaccggttttgtaaggatgagttaggccccaa 28246099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 414 - 537
Target Start/End: Original strand, 53863895 - 53864018
Alignment:
Q  414 tatattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataag 513  Q
    |||||||  ||||||| || ||| ||||| ||||| | ||| |||| || | |||||||||| |||||||||||||||||| || ||| | |||| ||||    
T  53863895 tatattgagaaaaacccaagtccaacatcggatagataagacttttgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaag 53863994  T
Q  514 aatgagttagaccccaaatttcaa 537  Q
     |||||||||||| ||||||||||    
T  53863995 gatgagttagaccacaaatttcaa 53864018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 56511544 - 56511617
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| || ||| |||||| |||| ||||||||| |||||||||||||    
T  56511544 agagtttataaagaggaggcactcctcaccttatgaaccgattttgtaaggatgagttaggccccaaatttcaa 56511617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 537
Target Start/End: Complemental strand, 1923184 - 1922982
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||| ||||||| |  |||||| | |||||||||| ||||| ||| ||| ||||||||||     || |||||| ||||||| |  |    
T  1923184 tggtatcagagcttgtccaattcaagggccacctaatgattcacgcaccaagcccaaagagtgttgggcgtgacgggggtgtattgggaaaaacccatgt 1923085  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||||||||| | ||| | || |  |||||||||||| ||||  || || |||||  | || | | ||||||||| |||||| |||||||||||||    
T  1923084 cccacatcagatagataagactcttgagaagagtttataaagaggaagcaatcatcaccatacaagccggttttataaggatgagtcagaccccaaattt 1922985  T
Q  535 caa 537  Q
    |||    
T  1922984 caa 1922982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 17077132 - 17076987
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||| |  ||||||  ||||||||||| ||||||||| |||  ||||||||||    || |||||| ||||||| || |    
T  17077132 tggtatcagagcttgtcgaattcaagggccacctacctattcacgcaccaagcctaaagagtgatgggcgtgag-gtggtgtattgggaaaaacccaagt 17077034  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggag 481  Q
    |||||||| ||||| | ||| | || ||||||||| ||||| |||||    
T  17077033 cccacatcggatagatgagactcttgatgagagttcataaagaggag 17076987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 56511337 - 56511410
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| || ||| | |||| |||| ||||||||| |||||||||||||    
T  56511337 agagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaggccccaaatttcaa 56511410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 466 - 537
Target Start/End: Complemental strand, 10390537 - 10390466
Alignment:
Q  466 agtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||| |||||||| ||||||||| || |||   |||| |||| |||||||||||||||||||||||    
T  10390537 agtttataaagaggagacattcctcaccttatgaaccagttttgtaaggatgagttagaccccaaatttcaa 10390466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 400563 - 400490
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgag 408  Q
    ||||||||||| ||||||||||||| | ||||||| || ||||||||| ||||| ||| | | |||||||||||    
T  400563 tggtatcagagcttgtcgaattcaagggtcacctacttcttcacgcaccaagcccaaagaatgttgggcgtgag 400490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 991244 - 991317
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||  ||||| |||||||||||| | || | | |||| |||| |||||||||||||||||||||||    
T  991244 agagtttataatgaggaggcactcctcaccttacaagccggttttgtaaggatgagttagaccccaaatttcaa 991317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 29669427 - 29669354
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  29669427 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 29669354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 29669742 - 29669669
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| |||||||| ||||||||||||||    
T  29669742 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaaaccccaaatttcaa 29669669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 45427316 - 45427243
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  45427316 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 45427243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 52214655 - 52214728
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  52214655 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 52214728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 53740222 - 53740295
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  53740222 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 53740295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 537
Target Start/End: Complemental strand, 6778739 - 6778667
Alignment:
Q  465 gagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||||||||| |||||||| ||||||||||| || | | |||| ||||  ||||||||||| ||||||||||    
T  6778739 gagtttataaagaggagacaatcctcacctcacaagccggttttgtaaggttgagttagacctcaaatttcaa 6778667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 529
Target Start/End: Complemental strand, 10390738 - 10390675
Alignment:
Q  466 agtttataaataggagacactcctcacctcataaactgattttataagaatgagttagacccca 529  Q
    |||||||||| |||||||||||||||||| || |||   ||||||||| ||||||||| |||||    
T  10390738 agtttataaagaggagacactcctcaccttatcaaccagttttataaggatgagttaggcccca 10390675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 537
Target Start/End: Complemental strand, 25753719 - 25753596
Alignment:
Q  414 tatattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataag 513  Q
    |||||||| ||||||| || ||||||||| |||||   ||| | || || |||||||||||| ||||| || ||||||||| | || | | |||| ||||    
T  25753719 tatattgggaaaaacccaagtcccacatcggatagacaagactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaag 25753620  T
Q  514 aatgagttagaccccaaatttcaa 537  Q
     |||||||||  ||||||||||||    
T  25753619 gatgagttaggtcccaaatttcaa 25753596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 537
Target Start/End: Complemental strand, 10390352 - 10390286
Alignment:
Q  471 ataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||| || ||||||||||||||| || ||||  |||| |||| ||||||||||| |||||||||||    
T  10390352 ataaagagaagacactcctcaccttatgaactagttttgtaaggatgagttagactccaaatttcaa 10390286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 27272746 - 27272780
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcaccta 369  Q
    |||||||||||| ||||||||||||||||||||||    
T  27272746 tggtatcagagtctgtcgaattcaatgatcaccta 27272780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 990587 - 990660
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | ||   | |||| |||| ||||||||| |||||||||||||    
T  990587 agagtttataaagaggaggcactcctcaccttacaagtcggttttgtaaggatgagttaggccccaaatttcaa 990660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 13254423 - 13254496
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| | ||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  13254423 agagtttataaagatgaggcactcctcaccttacaacccggttttgtaagcatgagttaggccccaaatttcaa 13254496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 23018510 - 23018583
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| || ||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  23018510 agagtttataaagaggaggcattcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 23018583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 23350791 - 23350911
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| |||||||||||| ||||  | ||| | || || ||||| |||||| |||||||| ||||||||| | || |   ||||||||| |    
T  23350791 tattgggaaaaacccaaatcccacatcggataaataagactcttgataagagtatataaagaggagacaatcctcaccttacaagcccgttttataag-a 23350889  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||  |||||||||||||    
T  23350890 tgagttaatccccaaatttcaa 23350911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 27048472 - 27048399
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| |||||||||  ||||||||||||    
T  27048472 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggtcccaaatttcaa 27048399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 33629651 - 33629772
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || | ||||||  ||||| | ||| | || |||||||||||||||||||||  ||||||||| ||| || | | |||| | |  |    
T  33629651 tattgggaaaaacccaagttccacattggatagatgagactcttgatgagagtttataaataggaggtactcctcacatcacaagccggttttgtgacga 33629750  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||||||||||||    
T  33629751 tgagttaggccccaaatttcaa 33629772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 33629775 - 33629848
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgag 408  Q
    ||||||||||| ||||||| ||||| || ||||||  ||||||||||| ||||| ||| |||  ||||||||||    
T  33629775 tggtatcagagcttgtcgacttcaaggaccacctacctattcacgcaccaagcccaaagagtgctgggcgtgag 33629848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 529
Target Start/End: Original strand, 35269051 - 35269116
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagacccca 529  Q
    |||||||||||| ||||  |||||||||||| | || |||||||| |||| ||||||||| |||||    
T  35269051 agagtttataaagaggaagcactcctcaccttacaagctgattttgtaaggatgagttaggcccca 35269116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 43943665 - 43943786
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| ||||| | ||| | || |  |||||||||||| ||||| || ||||||||| | || | | |||| |||| |    
T  43943665 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 43943764  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||| ||||||||    
T  43943765 tgagttaggcccccaatttcaa 43943786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 45427000 - 45426927
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | ||   | |||| |||| ||||||||| |||||||||||||    
T  45427000 agagtttataaagaggaggcactcctcaccttacaagtcggttttgtaaggatgagttaggccccaaatttcaa 45426927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 51469521 - 51469594
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | || | |||| ||||||||| |||||||||||||    
T  51469521 agagtttataaagaggaggcactcctcaccttacaagccggttgtgtaaggatgagttaggccccaaatttcaa 51469594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 53386176 - 53386103
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||||| ||||||||| | ||   | |||| |||| |||||||||||| ||||||||||    
T  53386176 agagtttataaagaggagacattcctcaccttacaagtcggttttgtaaggatgagttagacctcaaatttcaa 53386103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 537
Target Start/End: Complemental strand, 34206052 - 34205984
Alignment:
Q  469 ttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||||| ||||| |||||||||||| | || ||| |||| |||| |||||||||  ||||||||||||    
T  34206052 ttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagttaggtcccaaatttcaa 34205984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 434 - 539
Target Start/End: Original strand, 36037200 - 36037305
Alignment:
Q  434 tcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatt 533  Q
    ||||||||| ||||| | ||| | || ||||||||||||||| ||||  |||||||||||||| || | | |||| |||| |||||||||||||||||||    
T  36037200 tcccacatcggatagatgagactcttgatgagagtttataaagaggatgcactcctcacctcacaagccggttttgtaaggatgagttagaccccaaatt 36037299  T
Q  534 tcaata 539  Q
    ||||||    
T  36037300 tcaata 36037305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 537
Target Start/End: Complemental strand, 36039899 - 36039785
Alignment:
Q  423 aaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagtta 522  Q
    ||||||| ||||| |||||| ||||| | ||| | || ||||||||||||||| ||||  |||| ||||||||| || | | |||| |||| ||||||||    
T  36039899 aaaaacccaaatctcacatcggatagatgagactcttgatgagagtttataaagaggatgcactactcacctcacaagccggttttgtaaggatgagtta 36039800  T
Q  523 gaccccaaatttcaa 537  Q
    |||||||||||||||    
T  36039799 gaccccaaatttcaa 36039785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 7621934 - 7622007
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||| | |||||||||||||| ||| ||||  ||||||| |||| ||||||||| |||||||||||||    
T  7621934 agagtttatagagaggagacactcctctccttataagttgattttgtaaggatgagttaggccccaaatttcaa 7622007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 478 - 537
Target Start/End: Original strand, 30066036 - 30066095
Alignment:
Q  478 ggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||||||||||||||| || ||||| |||| |||| ||||||||| |||||||||||||    
T  30066036 ggagacactcctcaccttatgaactggttttgtaaggatgagttaggccccaaatttcaa 30066095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 10989146 - 10989025
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||||||||||| || ||||||||||| |||   ||| | || |  |||||||||||| ||||| || ||||||||| | || | | |||| |||| |    
T  10989146 tattggaaaaaacccaagtcccacatcaggtagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 10989047  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||||||||||||    
T  10989046 tgagttaggccccaaatttcaa 10989025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 10989353 - 10989232
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||||||||||| || ||||||||| |||||   ||| | || |  |||||||||||| ||||| || ||||||||| | || | | |||| |||| |    
T  10989353 tattggaaaaaacccaagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 10989254  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||||||||||||    
T  10989253 tgagttaggccccaaatttcaa 10989232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 18905896 - 18905969
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  18905896 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 18905969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 20298580 - 20298507
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || ||| |||| |||  ||||||||| |||||||||||||    
T  20298580 agagtttataaagaggaggcactcctcaccttacaagctggttttgtaatgatgagttaggccccaaatttcaa 20298507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 21085212 - 21085139
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || ||| |||| |||  ||||||||| |||||||||||||    
T  21085212 agagtttataaagaggaggcactcctcaccttacaagctggttttgtaatgatgagttaggccccaaatttcaa 21085139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 30176576 - 30176455
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||  || ||||||||| |||||   ||| | || ||||||||||||||| ||||| ||||| |||||||| || | | |||| |||| |    
T  30176576 tattgggaaaaactcaagtcccacatcggatagacgagactcttgatgagagtttataaagaggaggcactcttcacctcacaagccggttttgtaagga 30176477  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||| ||||||||    
T  30176476 tgagttaggccccgaatttcaa 30176455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 32931441 - 32931514
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  32931441 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 32931514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 36997206 - 36997279
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  36997206 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 36997279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 537
Target Start/End: Original strand, 22451385 - 22451461
Alignment:
Q  461 atgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||| |||||||| |||||||||| ||||||||| || | | |||| |||| ||||||||  |||||||||||||    
T  22451385 atgagaatttataaagaggagacacttctcacctcacaagccggttttgtaaggatgagttatgccccaaatttcaa 22451461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 535
Target Start/End: Original strand, 34248399 - 34248470
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttc 535  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||    
T  34248399 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttc 34248470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 537
Target Start/End: Complemental strand, 15011017 - 15010812
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcaccta--tttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaa 432  Q
    ||||||||||| ||||||||||||| |  | ||||  | ||||||||||| ||||| ||| |||  ||||||||||    || |||||| |||||||  |    
T  15011017 tggtatcagagcttgtcgaattcaagggccgcctaaatctattcacgcaccaagcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccca 15010918  T
Q  433 a-tcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaa 531  Q
    | ||||||||| |||||   ||| | || |  ||| |||||||| ||||| || ||||||||| | || | | ||||||||| ||||||||| |||||||    
T  15010917 agtcccacatcggatagacaagactcttgagaagaatttataaagaggaggcaatcctcaccttacaagccggttttataaggatgagttaggccccaaa 15010818  T
Q  532 tttcaa 537  Q
    ||||||    
T  15010817 tttcaa 15010812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 23027892 - 23027822
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||| ||||||| ||||| |||||||||||| | || | | |||| |||||||||||||| ||||||||||    
T  23027892 agagcttataaagaggaggcactcctcaccttacaagccggttttttaagaatgagttaggccccaaattt 23027822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 42228811 - 42228877
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaa 530  Q
    |||||||||||| ||||| || ||||||||| | || | |||||| |||| ||||||||||||||||    
T  42228811 agagtttataaagaggaggcaatcctcaccttacaagccgattttgtaaggatgagttagaccccaa 42228877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 20760724 - 20760651
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| | ||| || ||||||||| | |||| | |||| |||| ||||||||| |||||||||||||    
T  20760724 agagtttataaagatgaggcaatcctcaccttacaaaccggttttgtaaggatgagttaggccccaaatttcaa 20760651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 22277564 - 22277637
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||||||| ||||||| | || | | |||| |||| ||||||||  |||||||||||||    
T  22277564 agagtttataaagaggagacactactcaccttacaagccggttttgtaaggatgagttaatccccaaatttcaa 22277637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 533
Target Start/End: Original strand, 34248117 - 34248186
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatt 533  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||    
T  34248117 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatt 34248186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 43599351 - 43599424
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| || ||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  43599351 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 43599424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 43984380 - 43984307
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||  | || | | |||| |||| ||||||||| |||||||||||||    
T  43984380 agagtttataaagaggaggcactcctcaccatacaagccggttttgtaaggatgagttaggccccaaatttcaa 43984307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 537
Target Start/End: Complemental strand, 2064 - 1864
Alignment:
Q  338 tatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattg-gaaaaaacctaaatcc 436  Q
    |||||||||||||||||||||| | |||||||   |||||||||| ||||| ||| ||| |||||||||||    || ||||| ||||||||| || ||     
T  2064 tatcagagtttgtcgaattcaagggtcacctaccgattcacgcaccaagcccaaagagtgttgggcgtgaggggggtgtattgagaaaaaacccaagtct 1965  T
Q  437 cacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttca 536  Q
    |||||| ||||| | ||| | || || ||||||||||   ||||| ||||| |||||| | || | | |||| |||| |||||||||||| |||||||||    
T  1964 cacatcggatagataagactcttgataagagtttataccgaggaggcactcttcaccttacaagccggttttgtaagcatgagttagacctcaaatttca 1865  T
Q  537 a 537  Q
    |    
T  1864 a 1864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 537
Target Start/End: Complemental strand, 18914318 - 18914152
Alignment:
Q  371 ttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagttt 470  Q
    |||||||||||| ||||| ||| |||  ||||||||||    || |||||| ||||||| || ||||||||| ||||||  ||| | || |  | |||||    
T  18914318 ttattcacgcaccaagcccaaaaagtgctgggcgtgaggggggtgtattgggaaaaacccaagtcccacatcggatagtcaagactcttgagaaaagttt 18914219  T
Q  471 ataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||| |||||||| ||||||||| | ||  || |||| |||||||||||||| |||||||||||||    
T  18914218 ataaaaaggagacaatcctcaccttacaagttggttttgtaagaatgagttaggccccaaatttcaa 18914152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 18914480 - 18914359
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| ||||||  ||| | || |  | |||||||||| |||||||| ||||||||| | || ||| |||| ||||||    
T  18914480 tattgggaaaaacccaagtcccacatcggatagtcaagactcttgagaaaagtttataaaaaggagacaatcctcaccttacaagctggttttgtaagaa 18914381  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||||||||||||    
T  18914380 tgagttaggccccaaatttcaa 18914359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 416 - 534
Target Start/End: Complemental strand, 20720662 - 20720544
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||  || ||||||||||||||| | ||||| || || ||||||| |||| ||||| |||||||||| | | || | | |||| |||| |    
T  20720662 tattgggaaaaactcaagtcccacatcagatagataagattcttgataagagtttgtaaaaaggaggcactcctcactttacaagccggttttgtaagga 20720563  T
Q  516 tgagttagaccccaaattt 534  Q
    |||||||||||||||||||    
T  20720562 tgagttagaccccaaattt 20720544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 416 - 494
Target Start/End: Original strand, 36878318 - 36878396
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacct 494  Q
    |||||| ||||||| || ||||||||||||||| | ||| |||| || |||||||||||| |||||||| |||||||||    
T  36878318 tattgggaaaaaccaaagtcccacatcagatagataagacttttgataagagtttataaacaggagacaatcctcacct 36878396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 539
Target Start/End: Original strand, 18107745 - 18107947
Alignment:
Q  337 gtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaa--tagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||| ||||||||||||| || ||||||  ||| ||||||| ||||| |||  |||   |||||||||||   || |||||| ||||||| || |    
T  18107745 gtatcagagcttgtcgaattcaaggaccacctacctatccacgcaccaagcccaaaaatagagatgggcgtgagagg-gtgtattgggaaaaacccaatt 18107843  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    ||||||||  || | | ||| | || || ||| |||||||| ||||| |||||||||||| |||||| | |||| |||| |||| ||||||||| |||||    
T  18107844 cccacatcgaatcgataagactcttgataagaatttataaagaggaggcactcctcaccttataaaccggttttgtaaggatgaattagacccc-aattt 18107942  T
Q  535 caata 539  Q
    |||||    
T  18107943 caata 18107947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 530
Target Start/End: Original strand, 2716385 - 2716449
Alignment:
Q  466 agtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaa 530  Q
    |||||||||| |||||||||||||||||| |||| ||| |||| |||| ||||||||| ||||||    
T  2716385 agtttataaagaggagacactcctcaccttataagctggttttgtaaggatgagttaggccccaa 2716449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 39268010 - 39268102
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgatttt 508  Q
    |||||| ||||||| || ||||||||| ||||| | ||| | || || |||||||||||||||||| |||||||||||| || ||||| ||||    
T  39268010 tattgggaaaaacccaagtcccacatcggatagataagactcttgataagagtttataaataggaggcactcctcaccttatgaactggtttt 39268102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 533
Target Start/End: Original strand, 38376721 - 38376840
Alignment:
Q  414 tatattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataag 513  Q
    |||||||| ||||||| || ||||||||| ||||| | ||| | || |  |||||||||||| |||||||| ||||||||| | || | | |||| ||||    
T  38376721 tatattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaag 38376820  T
Q  514 aatgagttagaccccaaatt 533  Q
     ||||||||| |||||||||    
T  38376821 gatgagttaggccccaaatt 38376840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 13413576 - 13413697
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || |||||||||| |||| | ||| | || |  |||||||||||| ||||| || ||||||||| | || | | |||| |||| |    
T  13413576 tattgggaaaaacccaagtcccacatcaaatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 13413675  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||||||||||||    
T  13413676 tgagttaggccccaaatttcaa 13413697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 28358099 - 28358026
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||||| ||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  28358099 agagtttataaagaggagacaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 28358026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 38131804 - 38131877
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||||| ||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  38131804 agagtttataaagaggagacattcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 38131877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 39268218 - 39268339
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| ||||| | | | | || || ||||||||||||| |||| |||||||||||| || ||| | |||| |||| |    
T  39268218 tattgggaaaaacccaagtcccacatcggatagataaaactcttgataagagtttataaattggaggcactcctcaccttatgaaccggttttttaagga 39268317  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| ||  |||||||||    
T  39268318 tgagttaggcctaaaatttcaa 39268339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 539
Target Start/End: Original strand, 24918201 - 24918276
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaata 539  Q
    |||||||||||| ||||| |||| ||||||| | || | | |||| |||| ||||||||| |||||||||||||||    
T  24918201 agagtttataaagaggaggcactactcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaata 24918276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 3015609 - 3015464
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||| |  ||||||  ||||||||||| ||||| ||| |||  ||||||||||    || |||||| ||||||| ||      
T  3015609 tggtatcagagcttgtcgaattcaagggccacctacctattcacgcaccaagcccaaagagtgatgggcgtgag-ggggtgtattgggaaaaacccaagc 3015511  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggag 481  Q
    |||||||| ||||| | ||| | || ||||||||| ||||| |||||    
T  3015510 cccacatcggatagatgagactcttgatgagagttcataaagaggag 3015464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 513
Target Start/End: Original strand, 10668351 - 10668449
Alignment:
Q  415 atattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataag 513  Q
    ||||||| ||||||| || |||||||||| |||| | | | | || || |||||||| ||| |||||||||||||||||| |||| ||| |||| ||||    
T  10668351 atattgggaaaaacccaagtcccacatcaaatagataaaactcttgataagagtttacaaagaggagacactcctcaccttataagctggttttgtaag 10668449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 1028157 - 1028084
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | |||| | |||| | |  ||||||||| |||||||||||||    
T  1028157 agagtttataaagaggaggcactcctcaccttacaaaccggttttgtgacgatgagttaggccccaaatttcaa 1028084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 2908881 - 2908760
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||| | || |||||||||||||||   ||| |||| |  | |||||||||| ||||| || ||||||||| | || | | |||| |||| |    
T  2908881 tattgggaaaaatccaagtcccacatcagatagacaagacttttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaagga 2908782  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||||||||||||    
T  2908781 tgagttaggccccaaatttcaa 2908760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 4465249 - 4465176
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||||||  || |||||||||||||||||| | || ||| |||| |||| ||||||||  |||||||||||||    
T  4465249 agagtttactaagaggagacactcctcaccttaaaagctggttttgtaaggatgagttaagccccaaatttcaa 4465176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 12965310 - 12965237
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||  |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  12965310 agagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 12965237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 13843737 - 13843810
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| | |||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  13843737 agagtttataaagaggaggcgctcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 13843810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 24994109 - 24994182
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||| ||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  24994109 agagtttataaagaggaggcactactcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 24994182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 28156278 - 28156351
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| || ||||||||| | || ||| || | |||| |||||||||| ||||||||||||    
T  28156278 agagtttataaagaggaggcaatcctcaccttacaagctggttatgtaaggatgagttagaacccaaatttcaa 28156351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 24792184 - 24792124
Alignment:
Q  466 agtttataaataggagacactcctcacctcataaactgattttataagaatgagttagacc 526  Q
    |||||||||| |||||||||||||||||  | || | | |||| |||||||||||||||||    
T  24792184 agtttataaagaggagacactcctcaccgtacaagccggttttgtaagaatgagttagacc 24792124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 30770106 - 30770058
Alignment:
Q  486 tcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||||||||||| | |||| |||| ||||||||| ||||||||||    
T  30770106 tcctcacctcataaaccggttttgtaaggatgagttaggccccaaattt 30770058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 537
Target Start/End: Original strand, 32667094 - 32667296
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    ||||||||||| ||||||||||||| |  || |||   |||||||||| ||||| ||| |||  |||||||||     || |||||| ||||||| || |    
T  32667094 tggtatcagagcttgtcgaattcaagggccatctaccgattcacgcaccaagcccaaagagtgctgggcgtgacgggggtgtattgggaaaaaccgaagt 32667193  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||||||||| | ||| | || || |||||||||| | ||||| || |||| |||| | || | | |||| |||| ||||||||| ||||||||||    
T  32667194 cccacatcagatagataagactcttgataagagtttatatagaggaggcaatccttaccttacaagccggttttgtaaggatgagttaggccccaaattt 32667293  T
Q  535 caa 537  Q
    |||    
T  32667294 caa 32667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 6183430 - 6183357
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| |||||||||| ||||||| | || | | |||| |||| |||||||||||||||||||||||    
T  6183430 agagtttataaagaggagacacttctcaccttacaagccggttttgtaaggatgagttagaccccaaatttcaa 6183357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 10429779 - 10429852
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||||||||||||| || | || | | |||| |||| |||||||||||||||||||||||    
T  10429779 agagtttataaagaggagacactcctcatcttacaagccggttttgtaaggatgagttagaccccaaatttcaa 10429852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 41002273 - 41002346
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| | |||||| | ||||||| |||||| ||||||||||| ||||||||  |||||||||||||    
T  41002273 agagtttataaagatgagacatttctcaccttataaaccgattttataaggatgagttatgccccaaatttcaa 41002346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 432 - 535
Target Start/End: Original strand, 5721539 - 5721642
Alignment:
Q  432 aatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaa 531  Q
    |||| ||||||| |||| | ||||||||||| |||||||||||| | |||||||||| ||||| || ||    ||||||||| |||| ||||||| ||||    
T  5721539 aatcacacatcatatagataagattttttataagagtttataaagaagagacactccccaccttatgaatcagttttataaggatgaattagacctcaaa 5721638  T
Q  532 tttc 535  Q
    ||||    
T  5721639 tttc 5721642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 539
Target Start/End: Original strand, 17727313 - 17727519
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatt--tattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaa 432  Q
    ||||||||||| ||||||||||||| |  ||||||    ||||||||||| ||||| ||| |||  ||||||||||    || |||||| ||||||| ||    
T  17727313 tggtatcagagcttgtcgaattcaagggccacctaaacctattcacgcaccaagcccaaagagtgctgggcgtgaggggggtgtattgggaaaaacccaa 17727412  T
Q  433 atcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaat 532  Q
     ||||||||| ||||| | ||| | || |  |||||||||||| || || || ||||||||| | || | | |||| |||| ||||||||| ||||||||    
T  17727413 gtcccacatcggatagataagactcttgagaagagtttataaagagaaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaat 17727512  T
Q  533 ttcaata 539  Q
    || ||||    
T  17727513 tttaata 17727519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 537
Target Start/End: Original strand, 39108398 - 39108468
Alignment:
Q  467 gtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||||| | |||||||| ||||||||| |||||| | |||| |||| ||||||||||||||| |||||||    
T  39108398 gtttatatagaggagacaatcctcaccttataaaccggttttgtaaggatgagttagaccccatatttcaa 39108468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 12431890 - 12432011
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| ||||||| || ||||||||| ||||| | ||| | || |  |||||||||||| |||||||| ||||||||| | || | | |||| |||| |    
T  12431890 tattgggaaaaacccaagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaagga 12431989  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||| ||| |||||||||||||    
T  12431990 tgagctaggccccaaatttcaa 12432011  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 12432097 - 12432218
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||||||||| | || ||||||||| ||||| | ||| | || |  |||||||||||| ||||| || ||||||||| | ||| || |||| |||| |    
T  12432097 tattggaaaaaatccaagtcccacatcggatagataagaatcttgagaagagtttataaagaggaggcaatcctcaccttacaaattggttttttaagga 12432196  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    ||||||||  ||||||||||||    
T  12432197 tgagttaggtcccaaatttcaa 12432218  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 21214265 - 21214192
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  21214265 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 21214192  T

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Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 29684259 - 29684332
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    ||||| |||||| ||||| || ||||||||| | |||  ||||||||||||||||||||| || ||||||||||    
T  29684259 agagtatataaagaggaggcaatcctcaccttacaaaacgattttataagaatgagttaggcctcaaatttcaa 29684332  T

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Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 537
Target Start/End: Original strand, 31761124 - 31761245
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaa 515  Q
    |||||| |||||||||| ||||||||| ||||| | ||| |||| |  |||||||||| | | ||| || ||||||||| | ||  || |||| |||| |    
T  31761124 tattgggaaaaacctaagtcccacatcggatagataagacttttgagaagagtttatatagaagaggcaatcctcaccttacaagttggttttgtaagga 31761223  T
Q  516 tgagttagaccccaaatttcaa 537  Q
    |||||||| |||||||||||||    
T  31761224 tgagttaggccccaaatttcaa 31761245  T

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Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 42768398 - 42768325
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  42768398 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 42768325  T

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Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 43195824 - 43195897
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||||||    
T  43195824 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 43195897  T

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Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 434 - 526
Target Start/End: Complemental strand, 44266402 - 44266310
Alignment:
Q  434 tcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagacc 526  Q
    ||||||||||||||| | |||||||| |  |||||||||||| ||||||||||| ||| |  | || |||||||| || | ||||||||||||    
T  44266402 tcccacatcagatagataagatttttgagaagagtttataaagaggagacactcatcatcatacaagctgattttgtatggatgagttagacc 44266310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 493
Target Start/End: Original strand, 10862316 - 10862375
Alignment:
Q  434 tcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacc 493  Q
    ||||||||| ||||| | ||||||||||  |||||||||||| ||||||||||| |||||    
T  10862316 tcccacatcggatagataagattttttagaagagtttataaagaggagacactcatcacc 10862375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 537
Target Start/End: Original strand, 31761248 - 31761444
Alignment:
Q  335 tggtatcagagtttgtcgaattcaatgatcacctatttattcacgcacaaagcctaaatagtattgggcgtgagaaaagtatattggaaaaaacctaaat 434  Q
    |||| |||||| |||||||||||||||  |||||| | |||||||| | ||||| ||| ||| ||||| |||||   ||| ||      ||||||||| |    
T  31761248 tggtttcagagcttgtcgaattcaatggccacctactgattcacgccccaagcccaaagagtgttgggtgtgaggggagtgta------aaaacctaagt 31761341  T
Q  435 cccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||| | ||| | ||| | || || |||||||||| | ||||| || ||||||||| | || | |||||| |||| ||||||||  ||||||||||    
T  31761342 cccacatcgggtagataagactcttaataagagtttatatagaggaggcaatcctcaccttacaagccgattttgtaaggatgagttaagccccaaattt 31761441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 537
Target Start/End: Complemental strand, 5424835 - 5424773
Alignment:
Q  475 ataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||| ||||||||||||| | || | | |||| |||| |||||||||||||||||||||||    
T  5424835 ataggacacactcctcaccttacaagccggttttgtaaggatgagttagaccccaaatttcaa 5424773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 8044658 - 8044536
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaat-aggagacactcctcacctcataaactgattttataaga 514  Q
    |||||| ||||||| || |||| |||||||||| | ||| | || || ||||||||||||  ||||| |||||||||||| || |||   |||| ||||     
T  8044658 tattgggaaaaacccaagtcccgcatcagatagataagactcttgataagagtttataaaagaggaggcactcctcaccttatgaaccagttttgtaagg 8044559  T
Q  515 atgagttagaccccaaatttcaa 537  Q
    |||||||||  ||||||||||||    
T  8044558 atgagttaggtcccaaatttcaa 8044536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 10849555 - 10849485
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaattt 534  Q
    |||||||||||| ||||| |||||||||||| | ||  || |||| |||| ||||||||| ||||||||||    
T  10849555 agagtttataaagaggaggcactcctcaccttacaagttggttttgtaaggatgagttaggccccaaattt 10849485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 533
Target Start/End: Complemental strand, 3976535 - 3976466
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatt 533  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| |||||||||    
T  3976535 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatt 3976466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 23054366 - 23054439
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| |||||||||||| | ||   | |||| |||| ||||||||| |||||||||||||    
T  23054366 agagtttataaagaggaggcactcctcaccttacaagacggttttgtaaggatgagttaggccccaaatttcaa 23054439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 27545180 - 27545108
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| || ||||||||| | |||| | |||| |||| |||||||||| ||||||||||||    
T  27545180 agagtttataaagaggaggcaatcctcaccttacaaaccggttttgtaaggatgagttaga-cccaaatttcaa 27545108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 536
Target Start/End: Original strand, 11969092 - 11969164
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttca 536  Q
    |||||||||||| ||||| |||||||||||| | || | | |||| |||| ||||||||| ||| ||||||||    
T  11969092 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcccaaaatttca 11969164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 15820135 - 15820103
Alignment:
Q  505 ttttataagaatgagttagaccccaaatttcaa 537  Q
    |||| ||||||||||||||||||||||||||||    
T  15820135 ttttgtaagaatgagttagaccccaaatttcaa 15820103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 423 - 496
Target Start/End: Complemental strand, 15757 - 15684
Alignment:
Q  423 aaaaacctaaatcccacatcagatagtttagattttttatgagagtttataaataggagacactcctcacctca 496  Q
    ||||||| || | |||||||| |||| | |||||||| || |||||||||||||||||||||| ||||| ||||    
T  15757 aaaaacccaagtaccacatcaaatagataagatttttgataagagtttataaataggagacacccctcatctca 15684  T

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Target: scaffold0785 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 523
Target Start/End: Complemental strand, 3184 - 3125
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttag 523  Q
    |||||||||||| |||||||||||||||||  | || ||| ||||||||| |||||||||    
T  3184 agagtttataaagaggagacactcctcaccatagaagctggttttataaggatgagttag 3125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1112 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1112
Description:

Target: scaffold1112; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 1299 - 1245
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatga 518  Q
    |||||||||||| || |||||||| |||||| | ||||||||||| |||||||||    
T  1299 agagtttataaagagaagacactcatcaccttaaaaactgattttgtaagaatga 1245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 3011 - 2938
Alignment:
Q  464 agagtttataaataggagacactcctcacctcataaactgattttataagaatgagttagaccccaaatttcaa 537  Q
    |||||||||||| ||||| || ||||||| | | || ||| |||| |||| ||||||||| |||||||||||||    
T  3011 agagtttataaagaggaggcaatcctcactttacaagctggttttgtaaggatgagttaggccccaaatttcaa 2938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 535
Target Start/End: Original strand, 45345 - 45382
Alignment:
Q  498 aaactgattttataagaatgagttagaccccaaatttc 535  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  45345 aaaccgattttataaggatgagttagaccccaaatttc 45382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 34567 - 34507
Alignment:
Q  466 agtttataaataggagacactcctcacctcataaactgattttataagaatgagttagacc 526  Q
    |||||||||| |||||||||||||||||  | || | | |||| |||||||||||||||||    
T  34567 agtttataaagaggagacactcctcaccgtacaagccggttttgtaagaatgagttagacc 34507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 448
Target Start/End: Original strand, 193047 - 193079
Alignment:
Q  416 tattggaaaaaacctaaatcccacatcagatag 448  Q
    ||||||||||||||||| |||||||||||||||    
T  193047 tattggaaaaaacctaagtcccacatcagatag 193079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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