View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16728_low_7 (Length: 315)
Name: NF16728_low_7
Description: NF16728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16728_low_7 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 7241566 - 7241658
Alignment:
| Q |
11 |
caaaggagttcatcaaacgtcaaataatagtccatgaaccatgttttgctccctggtcgtggatctattaaaaagaacgtcacaagataaata |
103 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7241566 |
caaaggagttcatcaaacgtaaaatgatagtccatgaaccatgttttgctccctggtcgtggatctattaaaaagaacgtcacaagataaata |
7241658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University