View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16730_low_18 (Length: 247)
Name: NF16730_low_18
Description: NF16730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16730_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 34012358 - 34012129
Alignment:
| Q |
1 |
taataccttactcaatgaaaaagaagatgaacaacgtttttgtggctgtttggtttcttctttttcataatcttcttcgtagtgatactgatactcgtcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
34012358 |
taataccttactcaatgaaaaagaagatgaacaacgtttttgtggctgtttggtttcttctttttcatcatcttcttcgtagtgatactgatactcgtcc |
34012259 |
T |
|
| Q |
101 |
tcctcgtactcgtcgctatcgttaacaacctcgttgttgacgatatcgtcgatgtcatcatcagtggtgttgtagtaatagtgttgcatgtttgaattaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34012258 |
tcctcgtactcgtcgctatcgttaacaacctcgttgttgacgatatcgtcgatgtcatcatcagtggtgttgtagtaatagtgttgcatgtttgaattaa |
34012159 |
T |
|
| Q |
201 |
aacttgagtgatgttgatcgggggccatgg |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
34012158 |
aacttgagtgatgttgatcgggggccatgg |
34012129 |
T |
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