View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16731_high_21 (Length: 292)
Name: NF16731_high_21
Description: NF16731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16731_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 18 - 282
Target Start/End: Complemental strand, 40254296 - 40254032
Alignment:
| Q |
18 |
acacattatttggacatttcataattagaatttgacagaataagtgcagttttgcttagtgtatatgagactaaagaacaaaaatacgttacaattcaac |
117 |
Q |
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| T |
40254296 |
acacattatttggacatttcataattagaatttgacagaataagtgcagttttgcttagtgtatatgagactaaagaacaaaaatacgttacaattcaac |
40254197 |
T |
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| Q |
118 |
cttgtgttagtttttgtgtgtatcaaatatattttctgttgcaagaaaacgtaactgcgttgaactggttcctatagattaaccatattgagctttaggt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40254196 |
cttgtgttagtttttgtgtgtatcaaatatattttctgttgcaagaaaacgtaactgcgttgaactggttcctatagattaaccatattgagctttaggt |
40254097 |
T |
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| Q |
218 |
ttctgtttgagatattattgttttttctttgtaacaaacagaaatattctaccttatgacctatg |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
40254096 |
ttctgtttgagatattattgttttttctttgtaacaaacataaatattctaccttatgacctatg |
40254032 |
T |
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