View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16731_low_26 (Length: 283)
Name: NF16731_low_26
Description: NF16731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16731_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 49765962 - 49766229
Alignment:
| Q |
1 |
ccccaactctttccaccacggttttgagaaactgtaacagaaccttgttttcctcctccatttacagcatcatcagcagaattagaagaaacccaataag |
100 |
Q |
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| T |
49765962 |
ccccaactctttccaccacggttttgagaaactgtaacagaaccttgttttcctcctccatttacagcatcatcagcagaattagaagaaacccaataag |
49766061 |
T |
|
| Q |
101 |
atgaagtagatgaatttgaagatgaagatgatgtcatcatgaaaccactgaatattcctccacaccttctaagtactctctctttcatgcaatgatggtg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49766062 |
atgaagtagatgaatttgaagatgaagatgatgtcatcatgaaaccactgaatattcctccacaccttctaagtactctctctttcatgcaatgatggtg |
49766161 |
T |
|
| Q |
201 |
atggtggtggtggtcttgagcacggttcacagaagcaataccattagaattagcaactactccctttg |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
49766162 |
atggtggtggtggtcttgagcacggttcacagaagcaataccattagaactagcaactactccctttg |
49766229 |
T |
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