View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16732_high_1 (Length: 1001)
Name: NF16732_high_1
Description: NF16732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16732_high_1 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 520; Significance: 0; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 520; E-Value: 0
Query Start/End: Original strand, 144 - 691
Target Start/End: Complemental strand, 28586089 - 28585542
Alignment:
| Q |
144 |
catgatgctacaggcataaggtcttttgagcgagctacgtatgatataagaactaggattaaagacattgttaaaatatcttggtgatgatggctaactc |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28586089 |
catgatgctacaggcataaggtcttttgagcgagctacgtatgatataagaactaggattaaagacattgttaaaatatcttggtgatgatggctaactc |
28585990 |
T |
 |
| Q |
244 |
agactcaaaaagtgaaattggacatgttaatgctccgaggaagcctcgaattctacttggttgttgtggaagtgtagctgctatgaaatttggacttgtt |
343 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28585989 |
agactcaaaaagtgcaattggacatgttaatgctccgaggaagcctcgaattctacttggttgttgtggaagtgtagctgctatgaaatttggacttgtt |
28585890 |
T |
 |
| Q |
344 |
tttaatgctttttcagaatgggcagaagtaagagcagttgttacagaaacatctttgcaatttcttgttcatgagaaagcagaatcgttgttcacacaca |
443 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
28585889 |
tttaatgctttttcagaatgggcagaagtaagagcagttgttacagaaacatctttgcaatttcttgttcatgagaaagcagaatcattgttcacacaca |
28585790 |
T |
 |
| Q |
444 |
ggcatgacatatataaagacgattctgagtggaaaaattggaaaaagattggtgattctgtgcttcacattgaacttgctaattgggctgacatcatggt |
543 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28585789 |
ggcatgacatatataaagacgattctgagtggaaaaattggaaaaagataggtgattctgtgcttcacattgaacttgctaattgggctgacatcatggt |
28585690 |
T |
 |
| Q |
544 |
cattgctcccttatcagcacatactctttctaaggtaatcgatccgaacagttcttactttctactgtcatatgatgaacaatgttgccaagtttacatt |
643 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28585689 |
catttctcccttatcagcacatactctttctaaggtaatcaatcccaacagctcttactttctactgtcatatgatgaacaatgttgccaagtttacatt |
28585590 |
T |
 |
| Q |
644 |
tcataattattttaaactacattgaggttttgattagttgtgctcctg |
691 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28585589 |
tcataattattttaaactacattgaggttttgattagttgtgctcctg |
28585542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 144 - 568
Target Start/End: Original strand, 28403707 - 28404131
Alignment:
| Q |
144 |
catgatgctacaggcataaggtcttttgagcgagctacgtatgatataagaactaggattaaagacattgttaaaatatcttggtgatgatggctaactc |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28403707 |
catgatgctacaggcataaggtcttttgagcgagctacgtatgatataagaactaggattaaagacattgttaaaatatcttggtgatgatggctaactc |
28403806 |
T |
 |
| Q |
244 |
agactcaaaaagtgaaattggacatgttaatgctccgaggaagcctcgaattctacttggttgttgtggaagtgtagctgctatgaaatttggacttgtt |
343 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28403807 |
agactcaaaaagtgcaattggacatgttaatgctccgaggaagcctcgaattctacttggttgttgtggaagtgtagctgctatgaaatttggacttgtt |
28403906 |
T |
 |
| Q |
344 |
tttaatgctttttcagaatgggcagaagtaagagcagttgttacagaaacatctttgcaatttcttgttcatgagaaagcagaatcgttgttcacacaca |
443 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
28403907 |
tttaatgctttttcagaatgggcagaagtaagagcagttgttacagaaacatctttgcaatttcttgttcatgagaaagcagaatcattgttcacacaca |
28404006 |
T |
 |
| Q |
444 |
ggcatgacatatataaagacgattctgagtggaaaaattggaaaaagattggtgattctgtgcttcacattgaacttgctaattgggctgacatcatggt |
543 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28404007 |
ggcatgacatatataaagacgattctgagtggaaaaattggaaaaagataggtgattctgtgcttcacattgaacttgctaattgggctgacatcatggt |
28404106 |
T |
 |
| Q |
544 |
cattgctcccttatcagcacatact |
568 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
28404107 |
cattgctcccttatcagcacatact |
28404131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 749 - 985
Target Start/End: Complemental strand, 28585484 - 28585248
Alignment:
| Q |
749 |
atagtagtttatatttcatgtatacattacaagtcgatttgacatagacgaaacaagtttgtccttgtgatttttacatccttaactgttttgaggaatg |
848 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28585484 |
atagtagtatatatttcatgtatacattacaagtcgatttgacatagacaaaacaagtttgcccttgtgatttttacatccttaactgttttgaggaatg |
28585385 |
T |
 |
| Q |
849 |
gtgttgtgttgtagattgctggagggttgtgtgacaatctgttgacaagcattgtgagagcatgggactacgagaagccgatgtttgttgcaccatcaat |
948 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28585384 |
gtgttgtgttgtagatttctggagggttgtgtgacaatctgttgacaagcattgtgagagcatgggactacgagaagccgatgtttgttgcaccatcaat |
28585285 |
T |
 |
| Q |
949 |
ggatggttgtatgtggagaaaccctttcacagaacag |
985 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28585284 |
ggatggttgtatgtggagaaaccctttcacagaacag |
28585248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 766 - 985
Target Start/End: Original strand, 28404332 - 28404551
Alignment:
| Q |
766 |
atgtatacattacaagtcgatttgacatagacgaaacaagtttgtccttgtgatttttacatccttaactgttttgaggaatggtgttgtgttgtagatt |
865 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28404332 |
atgtatacattacaagtcgatttgacatagacgaaacaagtttgtccttgtgatttttacatccttaactgttttgaggaatggtgttgtgttgtagatt |
28404431 |
T |
 |
| Q |
866 |
gctggagggttgtgtgacaatctgttgacaagcattgtgagagcatgggactacgagaagccgatgtttgttgcaccatcaatggatggttgtatgtgga |
965 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
28404432 |
gctggagggttgtgtgacaatctgttgacaagcattgtgagagcatgggactacgagaagccgatgttcgttgcaccatcaatggatggttgtatgtgga |
28404531 |
T |
 |
| Q |
966 |
gaaaccctttcacagaacag |
985 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
28404532 |
gaaaccctttcacagaacag |
28404551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 852 - 985
Target Start/End: Original strand, 28417853 - 28417986
Alignment:
| Q |
852 |
ttgtgttgtagattgctggagggttgtgtgacaatctgttgacaagcattgtgagagcatgggactacgagaagccgatgtttgttgcaccatcaatgga |
951 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28417853 |
ttgtgttgtagattgctggagggttgtgtgacaatctattgacaagcattgtgagagcatgggactacgagaagccgatgttcgttgcaccatcaatgga |
28417952 |
T |
 |
| Q |
952 |
tggttgtatgtggagaaaccctttcacagaacag |
985 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
28417953 |
tggttgtatgtggagaaaccctttcacagaacag |
28417986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 280 - 568
Target Start/End: Original strand, 28417400 - 28417679
Alignment:
| Q |
280 |
gaggaagcctcgaattctacttggttgttgtggaagtgtagctgctatgaaatttggacttgtttttaatgctttttcagaatgggcagaagtaagagca |
379 |
Q |
| |
|
|||||||||||| ||| |||||||| |||||||||||||||||| |||||||||||||||||| || |||||| ||||||||||||||||||| ||| |
|
|
| T |
28417400 |
gaggaagcctcggattgtacttggtgcttgtggaagtgtagctgccatgaaatttggacttgttcttcgtgctttatcagaatgggcagaagtaaaagct |
28417499 |
T |
 |
| Q |
380 |
gttgttacagaaacatctttgcaatttcttgttcatgagaaagcagaatcgttgttcacacacaggcatgacatatataaagacgattctgagtggaaaa |
479 |
Q |
| |
|
||||| ||| ||||| |||| |||||||||| | |||||||||||||||| ||||| | | |||| |||||| ||| ||||||| |
|
|
| T |
28417500 |
gttgtcacaaaaacagctttacaatttcttgctaatgagaaagcagaatcaatgttc---------gaagtaatattctgcgacgatcatgactggaaaa |
28417590 |
T |
 |
| Q |
480 |
attggaaaaagattggtgattctgtgcttcacattgaacttgctaattgggctgacatcatggtcattgctcccttatcagcacatact |
568 |
Q |
| |
|
|| |||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
28417591 |
ataggaaaaagataggtgattctgtgcttcacattgagcttgctaagtgggctgatatcatcgtcattgctcccttatcagcacatact |
28417679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 829 - 984
Target Start/End: Complemental strand, 28580405 - 28580249
Alignment:
| Q |
829 |
cttaactgttttgaggaatggtgtt-gtgttgtagattgctggagggttgtgtgacaatctgttgacaagcattgtgagagcatgggactacgagaagcc |
927 |
Q |
| |
|
||||||| ||||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||| | |||||| |||||||||||||||||||||| |
|
|
| T |
28580405 |
cttaactattttgagacatggtgtttgtgttgtagattgctggggggtttagtgacaatctgttgacgactattgtgcgagcatgggactacgagaagcc |
28580306 |
T |
 |
| Q |
928 |
gatgtttgttgcaccatcaatggatggttgtatgtggagaaaccctttcacagaaca |
984 |
Q |
| |
|
||||||||||||||| |||||| ||| | ||||||||||| |||||||||||||| |
|
|
| T |
28580305 |
gatgtttgttgcaccgtcaatgaatgatgccatgtggagaaatcctttcacagaaca |
28580249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 28403544 - 28403685
Alignment:
| Q |
15 |
atagtttattccattttattctcagaacaattattta--------tactcaataagataattacagttttttatctgaaccagt-gtgtatattaaagaa |
105 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||| | ||||||||||||||| |
|
|
| T |
28403544 |
atagtctattccattttattctcagaacaattatttaatattcaataatcaatatgataattacagtttttgatctgaaccatttgtgtatattaaagaa |
28403643 |
T |
 |
| Q |
106 |
cttgtgacagttgattttgacatatgttgcattgtattcatg |
147 |
Q |
| |
|
||||||| |||| ||||| ||||||||| |||| ||||||| |
|
|
| T |
28403644 |
cttgtgatggttggttttgtcatatgttgtattgcattcatg |
28403685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 28586252 - 28586111
Alignment:
| Q |
15 |
atagtttattccattttattctcagaacaattattta--------tactcaataagataattacagttttttatctgaaccagt-gtgtatattaaagaa |
105 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| || |||||| || ||||||||||||| |||||||||| | ||||||||||||||| |
|
|
| T |
28586252 |
atagtctattccattttattctcagaacaattatttaatattcaataatcaatatgacaattacagtttttgatctgaaccatttgtgtatattaaagaa |
28586153 |
T |
 |
| Q |
106 |
cttgtgacagttgattttgacatatgttgcattgtattcatg |
147 |
Q |
| |
|
||||||| |||| ||||| ||||||||| |||| ||||||| |
|
|
| T |
28586152 |
cttgtgatggttggttttgtcatatgttgtattgcattcatg |
28586111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 857 - 982
Target Start/End: Original strand, 28420253 - 28420378
Alignment:
| Q |
857 |
ttgtagattgctggagggttgtgtgacaatctgttgacaagcattgtgagagcatgggactacgagaagccgatgtttgttgcaccatcaatggatggtt |
956 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||| | ||||| ||||||||| ||||| |||| ||||||| |||||||| |||||||||||| ||| | |
|
|
| T |
28420253 |
ttgtagattggtggagggttgtgtgataatctgctaacaagtattgtgagatcatggaactataagaagccaatgtttgtagcaccatcaatgaatgatg |
28420352 |
T |
 |
| Q |
957 |
gtatgtggagaaaccctttcacagaa |
982 |
Q |
| |
|
||||||||||| ||||| |||||| |
|
|
| T |
28420353 |
caatgtggagaaatcctttgacagaa |
28420378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 486 - 583
Target Start/End: Complemental strand, 28580672 - 28580575
Alignment:
| Q |
486 |
aaaagattggtgattctgtgcttcacattgaacttgctaattgggctgacatcatggtcattgctcccttatcagcacatactctttctaaggtaatc |
583 |
Q |
| |
|
||||||| |||||||||||||||| |||||| ||||| | ||||||||||||||||| ||||||||||||||||||| ||| | || | ||||||||| |
|
|
| T |
28580672 |
aaaagataggtgattctgtgcttcccattgagcttgcaagttgggctgacatcatggacattgctcccttatcagcagatattgttgccaaggtaatc |
28580575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 857 - 982
Target Start/End: Complemental strand, 28581937 - 28581812
Alignment:
| Q |
857 |
ttgtagattgctggagggttgtgtgacaatctgttgacaagcattgtgagagcatgggactacgagaagccgatgtttgttgcaccatcaatggatggtt |
956 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||| | ||||| ||||||||| ||||| |||| ||||||| |||||||| |||||||||||| ||| | |
|
|
| T |
28581937 |
ttgtagattggtggagggttgtgtgataatctgctaacaagtattgtgagatcatggaactataagaagccaatgtttgtagcaccatcaatgaatgatg |
28581838 |
T |
 |
| Q |
957 |
gtatgtggagaaaccctttcacagaa |
982 |
Q |
| |
|
||||||||||| ||||| |||||| |
|
|
| T |
28581837 |
caatgtggagaaatcctttgacagaa |
28581812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 837 - 948
Target Start/End: Complemental strand, 27834870 - 27834771
Alignment:
| Q |
837 |
ttttgaggaatggtgttgtgttgtagattgctggagggttgtgtgacaatctgttgacaagcattgtgagagcatgggactacgagaagccgatgtttgt |
936 |
Q |
| |
|
||||||| ||| ||||||| |||||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
27834870 |
ttttgagagatgatgttgtgctgtagattgctgcagggttgtgtgacaatcttttgac------------agcaagggactacgagaagccggtgtttgt |
27834783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 280 - 373
Target Start/End: Original strand, 28419851 - 28419944
Alignment:
| Q |
280 |
gaggaagcctcgaattctacttggttgttgtggaagtgtagctgctatgaaatttggacttgtttttaatgctttttcagaatgggcagaagta |
373 |
Q |
| |
|
|||||||||||| ||| | ||||| ||||||||||||||||||||||||||| ||||| ||| || ||||||| ||||||||||||||| |
|
|
| T |
28419851 |
gaggaagcctcggattgtgattggtgcttgtggaagtgtagctgctatgaaattcggactcgttcttcgtgcttttatggaatgggcagaagta |
28419944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 28582339 - 28582246
Alignment:
| Q |
280 |
gaggaagcctcgaattctacttggttgttgtggaagtgtagctgctatgaaatttggacttgtttttaatgctttttcagaatgggcagaagta |
373 |
Q |
| |
|
|||||||||||| ||| | ||||| ||||||||||||||||||||||||||| ||||| ||| || ||||||| ||||||||||||||| |
|
|
| T |
28582339 |
gaggaagcctcggattgtgattggtgcttgtggaagtgtagctgctatgaaattcggactcgttcttcgtgcttttatggaatgggcagaagta |
28582246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 508 - 583
Target Start/End: Original strand, 28420067 - 28420142
Alignment:
| Q |
508 |
tcacattgaacttgctaattgggctgacatcatggtcattgctcccttatcagcacatactctttctaaggtaatc |
583 |
Q |
| |
|
||||||| | ||||| ||||||||||| ||| || |||||||||||||||| || ||||||||| | ||||||||| |
|
|
| T |
28420067 |
tcacattaagcttgcgaattgggctgatatcttgctcattgctcccttatctgctcatactcttgccaaggtaatc |
28420142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 508 - 583
Target Start/End: Complemental strand, 28582123 - 28582048
Alignment:
| Q |
508 |
tcacattgaacttgctaattgggctgacatcatggtcattgctcccttatcagcacatactctttctaaggtaatc |
583 |
Q |
| |
|
||||||| | ||||| ||||||||||| ||| || |||||||||||||||| || ||||||||| | ||||||||| |
|
|
| T |
28582123 |
tcacattaagcttgcgaattgggctgatatcttgctcattgctcccttatctgctcatactcttgccaaggtaatc |
28582048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 8047415 - 8047370
Alignment:
| Q |
175 |
gagctacgtatgatataagaactaggattaaagacat-tgttaaaa |
219 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8047415 |
gagctacatatgatataagaactaggattaaagacatatgttaaaa |
8047370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 265
Target Start/End: Original strand, 28417270 - 28417363
Alignment:
| Q |
175 |
gagctacgtatgatataagaactaggattaaagacattgttaaaa---tatcttggtgatgatggctaactcagactcaaaaagtgaaattgga |
265 |
Q |
| |
|
||||| ||| ||||||||||| | |||| ||| ||||||||||| ||| |||| ||||||||||||||||||||| | ||||| ||||||| |
|
|
| T |
28417270 |
gagctgcgtgtgatataagaatcaagattgaaggcattgttaaaaaaatatattggcgatgatggctaactcagactctacaagtgcaattgga |
28417363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000004; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 855 - 888
Target Start/End: Complemental strand, 12983618 - 12983585
Alignment:
| Q |
855 |
tgttgtagattgctggagggttgtgtgacaatct |
888 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
12983618 |
tgttgtagattgctggaggattgtgtgacaatct |
12983585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 502 - 571
Target Start/End: Complemental strand, 12984829 - 12984760
Alignment:
| Q |
502 |
tgtgcttcacattgaacttgctaattgggctgacatcatggtcattgctcccttatcagcacatactctt |
571 |
Q |
| |
|
||||||||||||||| ||| || |||||||| ||||||||||||||||| || |||||| | |||||| |
|
|
| T |
12984829 |
tgtgcttcacattgagcttcgcaaatgggctgatatcatggtcattgctccattgtcagcaaacactctt |
12984760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University