View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16732_high_53 (Length: 223)

Name: NF16732_high_53
Description: NF16732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16732_high_53
NF16732_high_53
[»] chr8 (58 HSPs)
chr8 (25-223)||(18305972-18306170)
chr8 (25-223)||(7466332-7466530)
chr8 (25-223)||(32497522-32497720)
chr8 (25-223)||(14782136-14782344)
chr8 (25-223)||(44725811-44726019)
chr8 (25-223)||(16362193-16362391)
chr8 (25-223)||(42305796-42305994)
chr8 (25-223)||(19717882-19718090)
chr8 (25-223)||(9288458-9288666)
chr8 (33-223)||(18958736-18958936)
chr8 (33-223)||(39467477-39467677)
chr8 (25-222)||(10295381-10295589)
chr8 (25-223)||(31623692-31623880)
chr8 (25-223)||(26856063-26856272)
chr8 (40-223)||(4031294-4031467)
chr8 (25-223)||(43166691-43166899)
chr8 (30-223)||(4403104-4403307)
chr8 (25-195)||(37857144-37857314)
chr8 (29-223)||(41479094-41479288)
chr8 (29-223)||(26374435-26374639)
chr8 (29-223)||(24501818-24502022)
chr8 (29-223)||(2704824-2705028)
chr8 (29-223)||(42938122-42938326)
chr8 (33-223)||(10392246-10392446)
chr8 (29-223)||(43959655-43959848)
chr8 (87-223)||(32711355-32711491)
chr8 (29-223)||(42937350-42937552)
chr8 (29-223)||(5576625-5576830)
chr8 (29-223)||(7506904-7507108)
chr8 (29-223)||(42735282-42735486)
chr8 (29-223)||(23115174-23115377)
chr8 (92-223)||(39189892-39190022)
chr8 (77-148)||(13478313-13478384)
chr8 (74-223)||(41069941-41070091)
chr8 (79-142)||(8410463-8410526)
chr8 (156-223)||(18958911-18958978)
chr8 (167-223)||(14782330-14782386)
chr8 (167-223)||(19718076-19718132)
chr8 (167-223)||(44726005-44726061)
chr8 (90-148)||(4950092-4950150)
chr8 (167-223)||(7466290-7466346)
chr8 (91-139)||(9770497-9770545)
chr8 (159-223)||(9770962-9771026)
chr8 (167-223)||(18306156-18306212)
chr8 (167-223)||(42305980-42306036)
chr8 (164-223)||(32497438-32497497)
chr8 (156-223)||(42735461-42735528)
chr8 (169-223)||(4031455-4031509)
chr8 (169-223)||(5576818-5576872)
chr8 (169-223)||(23115365-23115419)
chr8 (169-223)||(32711479-32711533)
chr8 (169-223)||(42938314-42938368)
chr8 (169-223)||(43959613-43959667)
chr8 (167-200)||(4302813-4302846)
chr8 (167-223)||(4403062-4403118)
chr8 (167-223)||(16362151-16362207)
chr8 (164-200)||(37567365-37567401)
chr8 (167-223)||(39467663-39467718)
[»] chr5 (38 HSPs)
chr5 (25-223)||(4240463-4240661)
chr5 (25-223)||(40013713-40013911)
chr5 (25-223)||(5949106-5949303)
chr5 (25-223)||(1461149-1461347)
chr5 (25-223)||(14000106-14000314)
chr5 (25-223)||(1152104-1152312)
chr5 (25-223)||(13925928-13926136)
chr5 (33-223)||(4550266-4550466)
chr5 (30-220)||(7947579-7947779)
chr5 (25-223)||(22746294-22746494)
chr5 (25-223)||(37013911-37014099)
chr5 (25-193)||(39852372-39852550)
chr5 (29-223)||(21147064-21147268)
chr5 (28-223)||(139270-139475)
chr5 (28-223)||(5272923-5273128)
chr5 (29-223)||(9220722-9220916)
chr5 (29-223)||(7016744-7016948)
chr5 (90-223)||(14465303-14465436)
chr5 (29-223)||(33656046-33656252)
chr5 (79-223)||(32157962-32158107)
chr5 (80-223)||(6460789-6460932)
chr5 (79-223)||(27459015-27459158)
chr5 (43-195)||(849172-849334)
chr5 (90-223)||(9689657-9689787)
chr5 (167-223)||(40013897-40013953)
chr5 (81-123)||(1511409-1511451)
chr5 (169-223)||(5273116-5273170)
chr5 (167-223)||(4550452-4550508)
chr5 (167-223)||(14000300-14000356)
chr5 (167-223)||(37013869-37013925)
chr5 (169-223)||(21147022-21147076)
chr5 (169-223)||(33656240-33656294)
chr5 (164-197)||(26806578-26806611)
chr5 (29-98)||(27458955-27459024)
chr5 (167-223)||(4240647-4240703)
chr5 (167-223)||(5949064-5949120)
chr5 (167-223)||(16894055-16894111)
chr5 (164-200)||(17518474-17518510)
[»] chr3 (95 HSPs)
chr3 (25-223)||(10728653-10728851)
chr3 (25-223)||(37454857-37455055)
chr3 (30-223)||(39038036-39038229)
chr3 (25-223)||(44906515-44906723)
chr3 (25-223)||(36674132-36674340)
chr3 (25-221)||(48379155-48379361)
chr3 (25-223)||(50762062-50762260)
chr3 (25-223)||(11431522-11431730)
chr3 (25-223)||(34484032-34484240)
chr3 (66-223)||(10660531-10660688)
chr3 (30-223)||(40897140-40897343)
chr3 (25-223)||(17946284-17946492)
chr3 (25-223)||(32580173-32580380)
chr3 (25-223)||(52810374-52810582)
chr3 (25-223)||(23753409-23753596)
chr3 (25-220)||(26107260-26107465)
chr3 (25-223)||(52617973-52618175)
chr3 (25-223)||(31646288-31646494)
chr3 (25-223)||(54628839-54629048)
chr3 (25-223)||(18749608-18749816)
chr3 (40-223)||(51737743-51737937)
chr3 (25-223)||(50903242-50903453)
chr3 (33-223)||(44276385-44276571)
chr3 (34-223)||(20832988-20833187)
chr3 (29-223)||(19253823-19254027)
chr3 (29-223)||(20498205-20498409)
chr3 (43-223)||(6975745-6975922)
chr3 (25-223)||(6035055-6035263)
chr3 (29-223)||(996092-996296)
chr3 (29-223)||(3999651-3999855)
chr3 (29-223)||(10139152-10139356)
chr3 (30-148)||(39842501-39842619)
chr3 (29-223)||(33807804-33808009)
chr3 (29-223)||(6589560-6589764)
chr3 (25-223)||(37820479-37820687)
chr3 (90-195)||(539481-539586)
chr3 (29-195)||(3206211-3206387)
chr3 (29-223)||(40246840-40247044)
chr3 (29-196)||(27899367-27899534)
chr3 (79-223)||(29030002-29030145)
chr3 (29-223)||(33996547-33996751)
chr3 (33-223)||(35337731-35337930)
chr3 (25-223)||(44762039-44762247)
chr3 (25-223)||(54625588-54625796)
chr3 (45-214)||(15492889-15493061)
chr3 (29-223)||(25418362-25418566)
chr3 (29-223)||(29448864-29449068)
chr3 (77-221)||(53929192-53929336)
chr3 (81-223)||(1440020-1440163)
chr3 (90-223)||(52114524-52114658)
chr3 (159-223)||(18749566-18749630)
chr3 (90-223)||(51699557-51699689)
chr3 (119-223)||(12103625-12103729)
chr3 (68-148)||(23535866-23535946)
chr3 (67-143)||(52080003-52080079)
chr3 (81-206)||(55235198-55235322)
chr3 (25-87)||(45862983-45863045)
chr3 (29-142)||(5825139-5825262)
chr3 (79-223)||(22057757-22057902)
chr3 (29-98)||(6131239-6131308)
chr3 (178-223)||(27240408-27240453)
chr3 (167-223)||(6131325-6131381)
chr3 (167-223)||(10660489-10660545)
chr3 (175-223)||(27899382-27899430)
chr3 (167-223)||(36674326-36674382)
chr3 (169-223)||(3206394-3206448)
chr3 (169-223)||(23753584-23753638)
chr3 (174-223)||(44276343-44276392)
chr3 (167-223)||(11431480-11431536)
chr3 (167-223)||(18749524-18749580)
chr3 (167-223)||(27240439-27240495)
chr3 (164-200)||(27593198-27593234)
chr3 (164-200)||(36786017-36786053)
chr3 (167-223)||(44906709-44906765)
chr3 (167-223)||(50762246-50762302)
chr3 (167-223)||(50903439-50903495)
chr3 (167-223)||(54628797-54628853)
chr3 (167-214)||(6975712-6975759)
chr3 (169-223)||(1440151-1440204)
chr3 (169-223)||(10139344-10139398)
chr3 (169-223)||(19253781-19253835)
chr3 (169-223)||(35337689-35337743)
chr3 (169-223)||(37820675-37820729)
chr3 (169-223)||(44762235-44762289)
chr3 (133-223)||(996248-996337)
chr3 (164-197)||(10216163-10216196)
chr3 (164-197)||(10225671-10225704)
chr3 (167-223)||(2024161-2024217)
chr3 (167-223)||(6131367-6131423)
chr3 (171-223)||(6589518-6589570)
chr3 (167-223)||(31646480-31646536)
chr3 (164-200)||(39338299-39338335)
chr3 (167-223)||(44276301-44276357)
chr3 (156-196)||(51737912-51737952)
chr3 (171-223)||(54625546-54625598)
[»] chr2 (59 HSPs)
chr2 (25-223)||(28740297-28740495)
chr2 (50-223)||(7026602-7026775)
chr2 (25-223)||(13833436-13833634)
chr2 (25-223)||(28844553-28844761)
chr2 (25-223)||(3463669-3463868)
chr2 (25-223)||(18177265-18177473)
chr2 (25-223)||(25288157-25288365)
chr2 (25-223)||(33135621-33135828)
chr2 (25-223)||(10657404-10657612)
chr2 (25-223)||(26788782-26788989)
chr2 (25-223)||(10125304-10125504)
chr2 (30-223)||(6224576-6224760)
chr2 (89-223)||(3574845-3574979)
chr2 (29-223)||(16269689-16269893)
chr2 (29-223)||(24776353-24776557)
chr2 (33-223)||(378935-379125)
chr2 (25-223)||(12407378-12407586)
chr2 (29-223)||(20605234-20605438)
chr2 (29-223)||(31170632-31170836)
chr2 (32-223)||(215249-215437)
chr2 (29-223)||(14198585-14198789)
chr2 (29-223)||(22551771-22551975)
chr2 (29-223)||(43847644-43847848)
chr2 (28-223)||(35317060-35317265)
chr2 (29-223)||(305473-305677)
chr2 (29-223)||(5093055-5093259)
chr2 (79-223)||(44765773-44765917)
chr2 (28-223)||(32125248-32125456)
chr2 (66-223)||(26601255-26601412)
chr2 (79-223)||(1789440-1789584)
chr2 (29-223)||(9120124-9120328)
chr2 (25-131)||(43078653-43078769)
chr2 (167-223)||(20605150-20605206)
chr2 (92-148)||(21370631-21370687)
chr2 (156-223)||(13833609-13833676)
chr2 (167-223)||(7026560-7026616)
chr2 (167-223)||(26788740-26788796)
chr2 (79-223)||(8172134-8172278)
chr2 (167-222)||(10125490-10125545)
chr2 (169-223)||(24776311-24776365)
chr2 (167-223)||(215423-215479)
chr2 (164-200)||(11534881-11534917)
chr2 (167-223)||(28844511-28844567)
chr2 (167-223)||(33135579-33135635)
chr2 (164-200)||(34028935-34028971)
chr2 (165-223)||(19145021-19145082)
chr2 (169-223)||(5093247-5093301)
chr2 (169-223)||(12407336-12407390)
chr2 (169-223)||(16269647-16269701)
chr2 (169-223)||(20605108-20605162)
chr2 (169-223)||(20605192-20605246)
chr2 (169-223)||(31170824-31170878)
chr2 (167-223)||(3574803-3574859)
chr2 (164-196)||(7026545-7026577)
chr2 (171-223)||(14198779-14198830)
chr2 (164-200)||(20157759-20157795)
chr2 (164-200)||(24193595-24193631)
chr2 (167-223)||(28740481-28740537)
chr2 (171-223)||(32125206-32125258)
[»] chr7 (100 HSPs)
chr7 (25-223)||(509647-509845)
chr7 (33-223)||(44121919-44122109)
chr7 (25-223)||(23101289-23101497)
chr7 (25-223)||(28342338-28342546)
chr7 (25-223)||(29614765-29614973)
chr7 (25-223)||(39784090-39784298)
chr7 (25-223)||(40460718-40460916)
chr7 (28-223)||(33892264-33892459)
chr7 (33-223)||(37327918-37328108)
chr7 (25-223)||(46405442-46405640)
chr7 (25-223)||(3022917-3023125)
chr7 (25-223)||(9882238-9882445)
chr7 (25-223)||(18838380-18838588)
chr7 (25-223)||(29585506-29585703)
chr7 (25-223)||(7993133-7993341)
chr7 (25-223)||(28034806-28035014)
chr7 (33-223)||(33382628-33382828)
chr7 (25-221)||(8675326-8675532)
chr7 (25-223)||(39028088-39028286)
chr7 (30-223)||(19251530-19251723)
chr7 (25-223)||(12740364-12740571)
chr7 (29-223)||(3797072-3797266)
chr7 (30-223)||(17001049-17001232)
chr7 (29-223)||(9179871-9180065)
chr7 (58-223)||(32883773-32883948)
chr7 (30-223)||(47066694-47066878)
chr7 (29-223)||(973182-973386)
chr7 (29-223)||(30440794-30440998)
chr7 (29-223)||(43581095-43581299)
chr7 (25-223)||(47914264-47914472)
chr7 (79-223)||(12963692-12963836)
chr7 (29-223)||(40996654-40996858)
chr7 (33-223)||(44256775-44256975)
chr7 (33-223)||(10068457-10068658)
chr7 (25-223)||(41827305-41827503)
chr7 (33-223)||(44623295-44623485)
chr7 (29-223)||(7719265-7719469)
chr7 (29-223)||(12893406-12893610)
chr7 (29-223)||(18914740-18914944)
chr7 (29-223)||(20275268-20275472)
chr7 (29-223)||(34695271-34695475)
chr7 (29-223)||(44343401-44343605)
chr7 (25-223)||(47879166-47879374)
chr7 (29-201)||(7718367-7718549)
chr7 (92-223)||(10676498-10676629)
chr7 (25-139)||(19810874-19810988)
chr7 (43-223)||(727510-727691)
chr7 (79-223)||(34009010-34009155)
chr7 (118-223)||(29893072-29893177)
chr7 (76-223)||(31638873-31639020)
chr7 (79-222)||(25805684-25805827)
chr7 (25-143)||(32142918-32143046)
chr7 (25-128)||(37972868-37972981)
chr7 (29-223)||(39219382-39219586)
chr7 (33-142)||(43187366-43187485)
chr7 (79-143)||(43679492-43679556)
chr7 (167-223)||(48117746-48117802)
chr7 (90-223)||(1470309-1470441)
chr7 (90-145)||(447852-447907)
chr7 (90-143)||(7113530-7113583)
chr7 (167-223)||(19251488-19251544)
chr7 (167-223)||(29614959-29615015)
chr7 (167-223)||(34695187-34695243)
chr7 (167-223)||(39784048-39784104)
chr7 (167-223)||(8078393-8078450)
chr7 (167-220)||(12963653-12963706)
chr7 (174-223)||(43187545-43187594)
chr7 (167-223)||(9882431-9882487)
chr7 (167-223)||(10068415-10068471)
chr7 (159-207)||(10616955-10617003)
chr7 (167-223)||(17001218-17001274)
chr7 (171-223)||(18914934-18914986)
chr7 (167-223)||(23101247-23101303)
chr7 (167-223)||(28342296-28342352)
chr7 (167-223)||(37327876-37327932)
chr7 (164-200)||(40097140-40097176)
chr7 (167-223)||(48117788-48117844)
chr7 (156-223)||(7113412-7113479)
chr7 (164-223)||(41827263-41827322)
chr7 (169-223)||(12893364-12893418)
chr7 (164-198)||(28034997-28035031)
chr7 (169-223)||(30440752-30440806)
chr7 (169-223)||(34008968-34009022)
chr7 (169-223)||(34695229-34695283)
chr7 (169-223)||(43581287-43581341)
chr7 (169-223)||(44343593-44343647)
chr7 (169-223)||(47879124-47879178)
chr7 (169-223)||(47914222-47914276)
chr7 (86-123)||(28762618-28762655)
chr7 (86-123)||(28854104-28854141)
chr7 (174-223)||(32143121-32143170)
chr7 (171-223)||(727468-727520)
chr7 (164-196)||(3022902-3022934)
chr7 (167-223)||(3797252-3797308)
chr7 (167-223)||(7993091-7993147)
chr7 (171-223)||(31638831-31638883)
chr7 (167-223)||(33382586-33382642)
chr7 (167-223)||(39028046-39028102)
chr7 (164-200)||(39301247-39301283)
chr7 (167-223)||(46405626-46405682)
[»] chr4 (97 HSPs)
chr4 (25-223)||(23987210-23987408)
chr4 (25-223)||(5441400-5441608)
chr4 (25-223)||(27768052-27768260)
chr4 (25-223)||(54341140-54341348)
chr4 (25-223)||(30967311-30967509)
chr4 (25-223)||(32322087-32322295)
chr4 (25-223)||(37828404-37828612)
chr4 (25-223)||(49501521-49501721)
chr4 (25-223)||(49507586-49507786)
chr4 (33-223)||(50018247-50018437)
chr4 (25-223)||(51320917-51321125)
chr4 (30-223)||(12913220-12913413)
chr4 (25-223)||(54853470-54853678)
chr4 (25-195)||(28483923-28484092)
chr4 (33-223)||(37915823-37916023)
chr4 (25-223)||(49834835-49835023)
chr4 (33-223)||(32684018-32684197)
chr4 (33-223)||(5799973-5800164)
chr4 (25-223)||(36479244-36479441)
chr4 (79-211)||(29649733-29649865)
chr4 (30-223)||(41725121-41725321)
chr4 (25-221)||(55302841-55303047)
chr4 (29-223)||(31314748-31314938)
chr4 (29-223)||(46635654-46635852)
chr4 (29-223)||(25331127-25331331)
chr4 (79-223)||(9163072-9163216)
chr4 (32-223)||(44770862-44771064)
chr4 (29-223)||(41881088-41881293)
chr4 (29-223)||(1112889-1113093)
chr4 (25-223)||(7007370-7007578)
chr4 (25-223)||(32950838-32951046)
chr4 (29-223)||(40537166-40537355)
chr4 (30-223)||(12112941-12113144)
chr4 (29-223)||(22202011-22202215)
chr4 (79-223)||(19740974-19741118)
chr4 (25-148)||(48261198-48261331)
chr4 (25-142)||(56445357-56445474)
chr4 (79-223)||(28541694-28541838)
chr4 (29-223)||(39479361-39479567)
chr4 (29-223)||(1044805-1045007)
chr4 (29-223)||(3436589-3436793)
chr4 (90-223)||(28370920-28371053)
chr4 (29-195)||(42786708-42786884)
chr4 (25-223)||(34228585-34228793)
chr4 (79-223)||(25446047-25446190)
chr4 (29-223)||(37046456-37046662)
chr4 (25-148)||(41320881-41321014)
chr4 (97-223)||(39307337-39307463)
chr4 (25-223)||(30009679-30009887)
chr4 (99-223)||(23464951-23465075)
chr4 (79-223)||(25504705-25504849)
chr4 (79-223)||(53275835-53275979)
chr4 (159-223)||(20021340-20021404)
chr4 (79-148)||(7249831-7249900)
chr4 (167-223)||(24131126-24131182)
chr4 (25-98)||(8711997-8712070)
chr4 (30-98)||(24736466-24736534)
chr4 (167-223)||(37915781-37915837)
chr4 (160-223)||(11090345-11090408)
chr4 (164-223)||(37915739-37915798)
chr4 (28-216)||(41581794-41581991)
chr4 (167-223)||(5441358-5441414)
chr4 (29-105)||(11090428-11090504)
chr4 (167-223)||(30967495-30967551)
chr4 (172-223)||(29855677-29855728)
chr4 (169-223)||(41881281-41881335)
chr4 (90-143)||(27454155-27454208)
chr4 (133-223)||(40537307-40537397)
chr4 (167-223)||(27768010-27768066)
chr4 (164-200)||(40143822-40143858)
chr4 (167-223)||(54341098-54341154)
chr4 (164-200)||(54509760-54509796)
chr4 (167-223)||(54853664-54853720)
chr4 (156-223)||(25504824-25504891)
chr4 (169-223)||(1044764-1044817)
chr4 (169-223)||(19741106-19741160)
chr4 (169-223)||(20021298-20021352)
chr4 (169-223)||(22201969-22202023)
chr4 (29-98)||(24130987-24131057)
chr4 (169-223)||(24131170-24131224)
chr4 (169-223)||(25331085-25331139)
chr4 (169-223)||(28541652-28541706)
chr4 (169-223)||(32951034-32951088)
chr4 (169-223)||(37046650-37046704)
chr4 (169-223)||(39479555-39479609)
chr4 (167-209)||(41320788-41320830)
chr4 (164-197)||(28100584-28100617)
chr4 (164-197)||(50018189-50018222)
chr4 (167-223)||(7249926-7249982)
chr4 (164-200)||(26336123-26336159)
chr4 (167-223)||(37828598-37828654)
chr4 (164-208)||(41762017-41762061)
chr4 (175-223)||(42786722-42786770)
chr4 (164-200)||(47685190-47685226)
chr4 (167-223)||(49835009-49835065)
chr4 (167-223)||(50018205-50018261)
chr4 (167-223)||(51320875-51320931)
[»] chr1 (76 HSPs)
chr1 (25-223)||(29396390-29396598)
chr1 (25-223)||(38536101-38536299)
chr1 (25-223)||(38558319-38558517)
chr1 (25-223)||(6312564-6312772)
chr1 (33-223)||(51701570-51701770)
chr1 (34-223)||(5495117-5495306)
chr1 (31-223)||(18798481-18798663)
chr1 (25-223)||(25612147-25612355)
chr1 (25-223)||(29219278-29219474)
chr1 (25-223)||(9322502-9322710)
chr1 (25-223)||(15835055-15835263)
chr1 (25-223)||(48177464-48177672)
chr1 (31-223)||(46328032-46328234)
chr1 (25-223)||(28387395-28387603)
chr1 (33-223)||(48668795-48668982)
chr1 (33-223)||(45272577-45272765)
chr1 (91-223)||(49230876-49231008)
chr1 (29-223)||(21222137-21222341)
chr1 (29-223)||(35279662-35279866)
chr1 (29-223)||(19451814-19452018)
chr1 (79-223)||(9577498-9577642)
chr1 (29-223)||(33025502-33025697)
chr1 (33-223)||(50192560-50192761)
chr1 (29-223)||(28824379-28824582)
chr1 (25-223)||(35679130-35679338)
chr1 (29-223)||(6304258-6304463)
chr1 (29-223)||(45760015-45760220)
chr1 (25-223)||(47780701-47780909)
chr1 (29-223)||(49198275-49198478)
chr1 (79-223)||(32589019-32589163)
chr1 (79-223)||(730138-730283)
chr1 (128-223)||(8141243-8141338)
chr1 (43-223)||(45535934-45536124)
chr1 (67-223)||(47784377-47784532)
chr1 (29-223)||(47654357-47654562)
chr1 (25-223)||(37014642-37014850)
chr1 (29-223)||(49418074-49418278)
chr1 (29-145)||(31572203-31572329)
chr1 (81-223)||(29556094-29556236)
chr1 (52-223)||(48524309-48524490)
chr1 (67-140)||(955823-955896)
chr1 (126-223)||(22183360-22183457)
chr1 (81-145)||(31622527-31622591)
chr1 (167-223)||(953809-953865)
chr1 (90-148)||(51085860-51085918)
chr1 (167-223)||(15835249-15835305)
chr1 (167-223)||(19452046-19452102)
chr1 (167-223)||(25612105-25612161)
chr1 (169-223)||(28824570-28824624)
chr1 (169-223)||(49198466-49198519)
chr1 (164-201)||(10896845-10896882)
chr1 (164-200)||(1928406-1928442)
chr1 (167-223)||(18798439-18798495)
chr1 (167-223)||(29219236-29219292)
chr1 (164-200)||(36402293-36402329)
chr1 (167-223)||(49230834-49230890)
chr1 (167-223)||(51701528-51701584)
chr1 (164-223)||(48524267-48524326)
chr1 (169-223)||(730096-730150)
chr1 (169-223)||(953767-953821)
chr1 (169-223)||(14494157-14494211)
chr1 (185-223)||(14494199-14494237)
chr1 (169-223)||(19452006-19452060)
chr1 (169-223)||(28387591-28387645)
chr1 (169-223)||(35679326-35679380)
chr1 (86-123)||(17994704-17994741)
chr1 (167-223)||(6312522-6312578)
chr1 (167-223)||(8141324-8141380)
chr1 (191-223)||(25831084-25831116)
chr1 (164-200)||(29208801-29208837)
chr1 (167-223)||(29396584-29396640)
chr1 (164-200)||(33243312-33243348)
chr1 (164-200)||(33263485-33263521)
chr1 (165-197)||(42657763-42657795)
chr1 (171-223)||(45535892-45535944)
chr1 (167-223)||(46327990-46328046)
[»] chr6 (27 HSPs)
chr6 (25-223)||(30385070-30385266)
chr6 (25-223)||(31895692-31895900)
chr6 (30-223)||(34773405-34773608)
chr6 (25-223)||(14262434-14262642)
chr6 (25-223)||(34759051-34759260)
chr6 (25-145)||(31067567-31067687)
chr6 (25-223)||(7497072-7497279)
chr6 (29-223)||(6197483-6197687)
chr6 (29-223)||(2300743-2300947)
chr6 (25-128)||(4200438-4200541)
chr6 (77-217)||(7051847-7051987)
chr6 (29-223)||(1391620-1391824)
chr6 (79-223)||(28002661-28002805)
chr6 (81-223)||(29076594-29076737)
chr6 (81-223)||(29111567-29111711)
chr6 (87-223)||(3848208-3848342)
chr6 (119-223)||(656962-657065)
chr6 (167-223)||(31895650-31895706)
chr6 (167-223)||(34773363-34773419)
chr6 (164-200)||(10644016-10644052)
chr6 (164-200)||(30877898-30877934)
chr6 (169-223)||(1391578-1391632)
chr6 (169-223)||(2300935-2300989)
chr6 (169-223)||(6197675-6197729)
chr6 (86-123)||(34527615-34527652)
chr6 (171-223)||(3848118-3848170)
chr6 (167-223)||(14262628-14262684)
[»] scaffold0306 (1 HSPs)
scaffold0306 (25-223)||(13879-14077)
[»] scaffold0152 (2 HSPs)
scaffold0152 (25-223)||(21250-21448)
scaffold0152 (25-108)||(28463-28547)
[»] scaffold0543 (2 HSPs)
scaffold0543 (25-223)||(10557-10765)
scaffold0543 (167-223)||(10515-10571)
[»] scaffold0922 (3 HSPs)
scaffold0922 (90-223)||(4197-4330)
scaffold0922 (167-223)||(4155-4211)
scaffold0922 (164-201)||(4135-4172)
[»] scaffold0110 (1 HSPs)
scaffold0110 (25-223)||(39619-39827)
[»] scaffold1504 (2 HSPs)
scaffold1504 (25-223)||(860-1068)
scaffold1504 (167-223)||(818-874)
[»] scaffold0037 (1 HSPs)
scaffold0037 (29-223)||(100208-100412)
[»] scaffold0400 (2 HSPs)
scaffold0400 (29-223)||(15039-15243)
scaffold0400 (169-223)||(15231-15285)
[»] scaffold0365 (2 HSPs)
scaffold0365 (29-223)||(15682-15886)
scaffold0365 (169-223)||(15874-15928)
[»] scaffold0347 (1 HSPs)
scaffold0347 (25-112)||(14878-14965)
[»] scaffold0042 (1 HSPs)
scaffold0042 (25-223)||(58078-58286)
[»] scaffold0054 (2 HSPs)
scaffold0054 (25-195)||(36909-37089)
scaffold0054 (175-223)||(37027-37075)
[»] scaffold0004 (1 HSPs)
scaffold0004 (29-223)||(102090-102296)
[»] scaffold0151 (1 HSPs)
scaffold0151 (29-195)||(38611-38786)
[»] scaffold0113 (1 HSPs)
scaffold0113 (29-223)||(38901-39105)
[»] scaffold0276 (2 HSPs)
scaffold0276 (29-223)||(545-749)
scaffold0276 (169-223)||(737-791)
[»] scaffold0010 (5 HSPs)
scaffold0010 (162-223)||(233734-233795)
scaffold0010 (162-223)||(234582-234643)
scaffold0010 (162-223)||(222566-222627)
scaffold0010 (167-223)||(233692-233748)
scaffold0010 (167-223)||(234540-234596)
[»] scaffold0839 (1 HSPs)
scaffold0839 (40-98)||(3709-3767)
[»] scaffold0007 (1 HSPs)
scaffold0007 (90-140)||(199905-199955)


Alignment Details
Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 18305972 - 18306170
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18305972 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatctttcgaaattt 18306071  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18306072 gaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 18306170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 7466530 - 7466332
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  7466530 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaattcttcaaaattt 7466431  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7466430 gaatgattttgaataccacaagactttttttaagcgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 7466332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 32497720 - 32497522
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32497720 atctcaagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatcattcgaaattt 32497621  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32497620 gaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtattgattgaata 32497522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 14782136 - 14782344
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  14782136 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 14782235  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782236 ttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 14782335  T
Q  215 gattgaata 223  Q
    |||||||||    
T  14782336 gattgaata 14782344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 44725811 - 44726019
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  44725811 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 44725910  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725911 ttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 44726010  T
Q  215 gattgaata 223  Q
    |||||||||    
T  44726011 gattgaata 44726019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 16362391 - 16362193
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||| || |||||  ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  16362391 atctcaagaaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaattt 16362292  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||| ||||       || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16362291 gaatgattttgaataccacgagactttttttaagtaatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 16362193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 42305796 - 42305994
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||    
T  42305796 atctcaagaaatctcattttttcatgaatgactttttcttgttaaaattacactacaaaatccattaaaatccaattgattaaacaatccttcgaaattt 42305895  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||| ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42305896 gaattattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 42305994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 19717882 - 19718090
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||          |||||||||||||| |    
T  19717882 atctcaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaattc 19717981  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19717982 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 19718081  T
Q  215 gattgaata 223  Q
    |||||||||    
T  19718082 gattgaata 19718090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 9288458 - 9288666
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||          |||||||||||||||||||||    
T  9288458 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatcc 9288557  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  9288558 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaatttttgattgaatacctcaagacttttttaaaatgacaaagagtctt 9288657  T
Q  215 gattgaata 223  Q
    |||||||||    
T  9288658 gattgaata 9288666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 18958736 - 18958936
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaat 122  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||    
T  18958736 aaatctaatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaatccttcgaaat 18958835  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18958836 ttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgataaagagtcttgattgaat 18958935  T
Q  223 a 223  Q
    |    
T  18958936 a 18958936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 39467477 - 39467677
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaat 122  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||||||||||||| ||||||||          ||||||||||||||||||||||||    
T  39467477 aaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcgaaat 39467576  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39467577 ttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 39467676  T
Q  223 a 223  Q
    |    
T  39467677 a 39467677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 25 - 222
Target Start/End: Original strand, 10295381 - 10295589
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa-----------atccaatttattaaacaatc 113  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||           ||||||||||||||||||||    
T  10295381 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaaatccatcaaaatccaatttattaaacaatc 10295480  T
Q  114 cttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtct 213  Q
    |||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||| || |||| ||||||||    
T  10295481 cttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttttaagtgacgaagagtct 10295580  T
Q  214 tgattgaat 222  Q
    |||||||||    
T  10295581 tgattgaat 10295589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 31623880 - 31623692
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||| |||||||||||||| || ||||||| ||||||||||||||||||||||          |||||||||||||||||||||||||||    
T  31623880 atctcaagaaatcttatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcc----------aatttattaaacaatccttcgaaattt 31623791  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31623790 gaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 31623692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 26856272 - 26856063
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||| || ||||  |||||||| ||||||| |||||||||||||||||||||||||||||||||          |||||||||||||| |    
T  26856272 atctcaagaaatcttatttttttctgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatac 26856173  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctc-aagacttttttaaaatgacaaagagtct 213  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26856172 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaagacttttttaaaatgacaaagagtct 26856073  T
Q  214 tgattgaata 223  Q
    ||||||||||    
T  26856072 tgattgaata 26856063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 223
Target Start/End: Original strand, 4031294 - 4031467
Alignment:
Q  40 atcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaata 139  Q
    ||||||||||||||||| ||||||| |||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  4031294 atcttttcatgaaagactttttcttgttaaaattacactacaa----------aatccaatttattaaacaatccttcgaaatttgaatgattttgaata 4031383  T
Q  140 ccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||       || | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4031384 ccacaagactttttttaatttatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagattcttgattgaata 4031467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 43166691 - 43166899
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatcc 114  Q
    |||| |||||||||||||||||||||||| || ||||||| |||||||||||| |||||||||||||||          |||||||||||||||||||||    
T  43166691 atctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 43166790  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       ||||||  || ||||||||||||||||| |||||||||||| ||||  |||| ||||||    
T  43166791 ttcgaaatttgaatgattttgaataccacaagacttttttaaaatgacaaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtctt 43166890  T
Q  215 gattgaata 223  Q
    |||||||||    
T  43166891 gattgaata 43166899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 4403307 - 4403104
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 119  Q
    |||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||          |||||||||||||||||||||    
T  4403307 aagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttattaaacaatccttcga 4403208  T
Q  120 aatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 219  Q
    |||||||||||||||||||||||| |||        || ||||||||| |||| ||||||||| |||||| ||||||||||||| || ||||||||||||    
T  4403207 aatttgaatgattttgaataccacgagattttttttaagtgatgaaaaatcttaattgaatacttcaagatttttttaaaatgaaaatgagtcttgattg 4403108  T
Q  220 aata 223  Q
    ||||    
T  4403107 aata 4403104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 37857314 - 37857144
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||  ||||||| || |||||||||||||||||||  |||||||||||||||||||||||||||  ||||||    
T  37857314 atctcaagaaatctcatcttttcatgaaagattttttcttgttcaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttaaaattt 37857215  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttt 195  Q
    |||||| |||||||||||||||||       || ||||||||| |||| |||||||||||||| |||||||    
T  37857214 gaatgaatttgaataccacaagactttttttaagtgatgaaaaatcttaattgaatacctcaaaacttttt 37857144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 41479288 - 41479094
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaat 128  Q
    ||||||||||||| |||||||||||||  ||||| |  |||||||  |||| ||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  41479288 taagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaaaatctgatttattaaacaatcattcgaaatttgaat 41479189  T
Q  129 gattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||  ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  41479188 gattttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaata 41479094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 26374435 - 26374639
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  26374435 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcg 26374534  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  26374535 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 26374634  T
Q  219 gaata 223  Q
    |||||    
T  26374635 gaata 26374639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 24501818 - 24502022
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  24501818 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 24501917  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||| ||||| ||||||||    
T  24501918 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgataaagaatcttgatt 24502017  T
Q  219 gaata 223  Q
    |||||    
T  24502018 gaata 24502022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 2704824 - 2705028
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||  ||||| ||||||||||||||||||          ||||||||||||||| ||||    
T  2704824 taagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaaaatccatcaaaatttgatttattaaacaatcattcg 2704923  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  2704924 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 2705023  T
Q  219 gaata 223  Q
    |||||    
T  2705024 gaata 2705028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 42938122 - 42938326
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| |||||    ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  42938122 taagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 42938221  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||| | ||||||||    
T  42938222 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaataatcttgatt 42938321  T
Q  219 gaata 223  Q
    |||||    
T  42938322 gaata 42938326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 10392246 - 10392446
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaat 122  Q
    ||||||||| |||||||||||||  ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||||||    
T  10392246 aaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 10392345  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    |||||||||| |||||||||| ||||       || |||| |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||||||    
T  10392346 ttgaatgattctgaataccactagacttttcttaagtgattaaaagtcttgattgaatatcacaagaattttttaaaatgacaaagaatcttgattgaat 10392445  T
Q  223 a 223  Q
    |    
T  10392446 a 10392446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 43959848 - 43959655
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaat 128  Q
    ||||||||||||| |||| || |||||| ||||| |  ||||||| ||| |||||||||  |||||||  ||||||||||||||| ||||||||||||||    
T  43959848 taagaaatctcatgttttaattaaagactttttcatgctaaaatttcaccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaat 43959749  T
Q  129 gattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| || |       || |||| || | ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  43959748 gattttgaataccactagtcttttttgaagtgattaagaatcttgattgaata-cacaagacttttttaaaatgacaaagaatcttgattgaata 43959655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 32711355 - 32711491
Alignment:
Q  87 ccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctca 186  Q
    ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||    
T  32711355 ccacaaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccaca 32711454  T
Q  187 agacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||| |||||||||||| |||||||||||||    
T  32711455 agactttttttaaatgacaaagaatcttgattgaata 32711491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 42937552 - 42937350
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||  |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  42937552 taagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 42937453  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||  ||||||||||| |||||||||||| |||||||||| | ||||||||    
T  42937452 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtc--gattgaataccacaagactttttttaaatgacaaaaaatcttgatt 42937355  T
Q  219 gaata 223  Q
    |||||    
T  42937354 gaata 42937350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 5576625 - 5576830
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaa----------tttattaaacaatccttcg 118  Q
    ||||||||||||| ||||||| |||||| ||||| |  ||||||| ||||| ||||||||||||||||||           ||||||||||||| |||||    
T  5576625 taagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctggtttattaaacaattcttcg 5576724  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaa-tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgat 217  Q
    |||||||||||||||||||||||||  |||        || |||| || ||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  5576725 aaatttgaatgattttgaataccacttgacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgat 5576824  T
Q  218 tgaata 223  Q
    ||||||    
T  5576825 tgaata 5576830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 7506904 - 7507108
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| ||| |||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          |||||||||||||||||||     
T  7506904 taagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttca 7507003  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||| ||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||| | ||||||||| || ||| ||||    
T  7507004 aaatttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacttttcttaaatgacaaggaatctcgatt 7507103  T
Q  219 gaata 223  Q
    |||||    
T  7507104 gaata 7507108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 42735282 - 42735486
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||| ||||||||| |||||    ||||||| ||||| ||||||||||||||||||          |||||||||||||| |||||    
T  42735282 taagaaatctcatgtttttatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatacttcg 42735381  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || |||||| |||||||||| |||| ||||||| |||||| ||||| ||||||||    
T  42735382 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccacaagtctttttttaaatgataaagaatcttgatt 42735481  T
Q  219 gaata 223  Q
    |||||    
T  42735482 gaata 42735486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 23115174 - 23115377
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||| |||||||| |||||||||||||| ||||| |   |||||| || || ||||||||||||||||||          |||||||||||||||||||     
T  23115174 taaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcc 23115273  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||| ||||||||| ||||       || |||| || ||||||||||||||||| |||||| ||||| |||||||||||| ||||||||    
T  23115274 aaatttgaatgattt-gaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacattttttaaatgacaaagaatcttgatt 23115372  T
Q  219 gaata 223  Q
    |||||    
T  23115373 gaata 23115377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 39189892 - 39190022
Alignment:
Q  92 aaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagact 191  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| ||  ||||       ||||||| || ||| || |||||||||| |||||||    
T  39189892 aaattcaatttattaaacaatccttcgaaatttgaatgatgttgaata-catgagactttttttaaatgataaagagtttttattgaataccacaagact 39189990  T
Q  192 tttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| ||||  ||||||||||||||||||||    
T  39189991 ttttttaaattgcaaagagtcttgattgaata 39190022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 13478313 - 13478384
Alignment:
Q  77 ctacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 148  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||||| || |||||||||||| |||||||    
T  13478313 ctacaaaatccaacgaaatctaatttattaaacaatccttcgaaatttaaaagattttgaatactacaagac 13478384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 41070091 - 41069941
Alignment:
Q  74 acactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaaga-cnnnnnnnaaatgatgaaaagtctt 172  Q
    |||||| ||||||||| ||||| |||||||| |||||||| || |||||| |||||||||| ||||||||||||         |||| ||||| ||||||    
T  41070091 acactagaaaatcccagaaaattcaatttatcaaacaatcatttgaaattggaatgattttaaataccacaagatttttttttaaattatgaagagtctt 41069992  T
Q  173 gattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    | ||||||||| ||| |||||||  |||||||  | |||||||||||||||    
T  41069991 ggttgaataccacaaaactttttataaatgacgtaaagtcttgattgaata 41069941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 8410463 - 8410526
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacca 142  Q
    |||||||||  |||| ||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  8410463 acaaaatccatcaaagtccaatttagtaaacaatccttccaaatttcaatgattttgaatacca 8410526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 18958911 - 18958978
Alignment:
Q  156 aaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||| || ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  18958911 aaatgataaagagtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 18958978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 14782330 - 14782386
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  14782330 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 14782386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 19718076 - 19718132
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  19718076 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 19718132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 44726005 - 44726061
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  44726005 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 44726061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 4950092 - 4950150
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 148  Q
    ||||||| ||||||||||| |||| || |||| ||||||||||||||||||| ||||||    
T  4950092 caaaatctaatttattaaataatcttttgaaacttgaatgattttgaataccccaagac 4950150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 7466346 - 7466290
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  7466346 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 7466290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 9770497 - 9770545
Alignment:
Q  91 aaaatccaatttattaaacaatccttcgaaatttgaatgattttgaata 139  Q
    |||||||||||||||||| ||| ||| ||||||||||| ||||||||||    
T  9770497 aaaatccaatttattaaataattctttgaaatttgaattattttgaata 9770545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 9770962 - 9771026
Alignment:
Q  159 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||| |||||||||||||||||||  |  ||||||||| |||||| ||||| |||||||||||||    
T  9770962 tgataaaaagtcttgattgaatacaacgtgactttttttaaatgagaaagattcttgattgaata 9771026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 18306156 - 18306212
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  18306156 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 18306212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 42305980 - 42306036
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| | |||||||||||||    
T  42305980 agtcttgattgaataccacaagactttttttaaattgcaaaaattcttgattgaata 42306036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 32497497 - 32497438
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||| |||||||||||| || |   ||| |||||||||||||||    
T  32497497 aaaagtcttgattgaataccacaagactttttttaagttgtaaaaagtcttgattgaata 32497438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 42735461 - 42735528
Alignment:
Q  156 aaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||| || | ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  42735461 aaatgataaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 42735528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 4031455 - 4031509
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| |||||||||||| ||||  |||| ||||||||| |||||    
T  4031455 tcttgattgaataccacaagactttttttaaattgcaaaaagtcttgatcgaata 4031509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 5576818 - 5576872
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  5576818 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 5576872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 23115365 - 23115419
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  23115365 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 23115419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 32711479 - 32711533
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  32711479 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 32711533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 42938314 - 42938368
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  42938314 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 42938368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 43959667 - 43959613
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  43959667 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 43959613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 4302813 - 4302846
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaa 200  Q
    |||||||||||||||||| |||||||||||||||    
T  4302813 agtcttgattgaatacctaaagacttttttaaaa 4302846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 4403118 - 4403062
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| ||| |||||||||||    
T  4403118 agtcttgattgaataccacaagactttttttaagttgcaaaaagttttgattgaata 4403062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 16362207 - 16362151
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| | ||||| |||||| || | ||||| |||||||||||||||    
T  16362207 agtcttgattgaatatcacaagattttttttaagttacaaaaagtcttgattgaata 16362151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 37567365 - 37567401
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  37567365 aaaagtcttaattgaatacctaaagacttttttaaaa 37567401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 39467663 - 39467718
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||||||||||||||  ||  ||| |||||||||||||||    
T  39467663 agtcttgattgaataccacaagacttttttaagttg-taaaaagtcttgattgaata 39467718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 2e-79; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 4240463 - 4240661
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  4240463 atctcaagaaatctcatctattcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaattt 4240562  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4240563 gaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 4240661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 40013713 - 40013911
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||    
T  40013713 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccattaaaatccaattgattaaacaatccttcgaaattt 40013812  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40013813 gaatgattttgaataacacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 40013911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 5949303 - 5949106
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  5949303 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaattt 5949204  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||||||        || ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5949203 gaatgattttgaataccacaaga-tttttttaagtgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 5949106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 1461149 - 1461347
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  1461149 atctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacagtacaaaatccatcaaaatccaatttattaaacaatccttcgaaattt 1461248  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| | ||||||       || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1461249 gaatgattttgaatagcgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaattacaaagagtcttgattgaata 1461347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 14000106 - 14000314
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  14000106 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 14000205  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14000206 ttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagactttttaaaaatgacaaagagtctt 14000305  T
Q  215 gattgaata 223  Q
    |||||||||    
T  14000306 gattgaata 14000314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 1152104 - 1152312
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  1152104 atcttaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 1152203  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
     |||||||||||||||||||||||||||||||||       || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1152204 ctcgaaatttgaatgattttgaataccacaagactttttttaagtgataaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 1152303  T
Q  215 gattgaata 223  Q
    |||||||||    
T  1152304 gattgaata 1152312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 13926136 - 13925928
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  13926136 atctcaagaaatatcatcttttcttgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 13926037  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13926036 ttcgaaatttgaatgattttgaataccacaagactttttttaagtaatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 13925937  T
Q  215 gattgaata 223  Q
    |||||||||    
T  13925936 gattgaata 13925928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 4550266 - 4550466
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatccttcgaaat 122  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||||||| |||||||          |||||||||||||||||||||||||||||    
T  4550266 aaatctcatcttttcatgaaagactctttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 4550365  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  4550366 ttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagcctttgttaaaatgacaaagagtcttgattgaat 4550465  T
Q  223 a 223  Q
    |    
T  4550466 a 4550466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 30 - 220
Target Start/End: Original strand, 7947579 - 7947779
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 119  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||          |||||||||||||||||||||    
T  7947579 aagaaatctcttcttttcatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcga 7947678  T
Q  120 aatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 219  Q
    |||||||||||||||||||| | ||||||       || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7947679 aatttgaatgattttgaatatcgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 7947778  T
Q  220 a 220  Q
    |    
T  7947779 a 7947779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 22746494 - 22746294
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattaca--ctacaaaatcccacaaaatccaatttattaaacaatccttcgaaat 122  Q
    |||||||||||||| ||||||||||||||||  ||||||| |||||||||||  | |||||||||  |||||| ||||||||||||||||| ||||||||    
T  22746494 atcttaagaaatcttatcttttcatgaaagagtttttcttgttaaaattacatcccacaaaatccatcaaaattcaatttattaaacaatcattcgaaat 22746395  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||||||||||||| ||||||||       || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22746394 ttgaatgattttgaatatcacaagactttttttaagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagttttgattgaat 22746295  T
Q  223 a 223  Q
    |    
T  22746294 a 22746294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 37014099 - 37013911
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||          |||||||||||||| ||||||||||||    
T  37014099 atctcaagaaatctcatctttttatgaaagactttttcttgttaaaattatactacaaaatcc----------aatttattaaacaacccttcgaaattt 37014010  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||||||       || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37014009 gaatgattttgaataccgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttaaaaatgacaaagagtcttgattgaata 37013911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 25 - 193
Target Start/End: Complemental strand, 39852550 - 39852372
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatccca----------caaaatccaatttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||          |||||||||||||| ||||||||||    
T  39852550 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttagtaaacaatcc 39852451  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttt 193  Q
    ||||||||||||||||||||||||||||||||||       ||||||||| ||||||||||||||||||||||||||||    
T  39852450 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgagaagtcttgattgaatacctcaagacttt 39852372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 21147268 - 21147064
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  21147268 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 21147169  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  21147168 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 21147069  T
Q  219 gaata 223  Q
    |||||    
T  21147068 gaata 21147064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 223
Target Start/End: Complemental strand, 139475 - 139270
Alignment:
Q  28 ttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaa----------tttattaaacaatccttc 117  Q
    |||||||||||||| |||| ||||||||| ||||| |||||||||| ||||  ||||||| ||||||||||           ||||||||||||||||||    
T  139475 ttaagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatccatcaaaatctggtttattaaacaatccttc 139376  T
Q  118 gaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgat 217  Q
    |||||||||||||||||||||||||| ||||       || |||| |||||||||||||||||||| || ||||||||| |||||||||||| |||||||    
T  139375 gaaatttgaatgattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacatgactttttttaaatgacaaagaatcttgat 139276  T
Q  218 tgaata 223  Q
    ||||||    
T  139275 tgaata 139270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 223
Target Start/End: Original strand, 5272923 - 5273128
Alignment:
Q  28 ttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttc 117  Q
    |||||||||||||| |||| ||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||| |||    
T  5272923 ttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattc 5273022  T
Q  118 gaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgat 217  Q
    |||||||||||||||||||||||||| ||||       ||||||| || |||||||||||||||||  ||||||||||| |||||||||||| |||||||    
T  5273023 gaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccataagactttttttaaatgacaaagaatcttgat 5273122  T
Q  218 tgaata 223  Q
    ||||||    
T  5273123 tgaata 5273128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 9220722 - 9220916
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaat 128  Q
    |||||||| |||| |||||| ||||||| ||||| | ||||||||  |||| ||||||| ||||| || |||| |||||||||||||| |||||||||||    
T  9220722 taagaaatatcatgttttcacgaaagactttttcgtgttaaaattttactataaaatcctacaaattctaattcattaaacaatccttagaaatttgaat 9220821  T
Q  129 gattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| || |||||       || |||| || ||||||||||||||| | |||||||||||  |||||||||||||| |||||||||||    
T  9220822 gattttgaatatcataagactttttttaagtgataaagagtcttgattgaatatcacaagactttttctaaatgacaaagagttttgattgaata 9220916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 7016744 - 7016948
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||| ||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  7016744 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 7016843  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||  |||||||||||| ||||   ||||||||||||||    
T  7016844 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaagactttttttaaattgaaaagagtcttgatt 7016943  T
Q  219 gaata 223  Q
    |||||    
T  7016944 gaata 7016948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 14465303 - 14465436
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaaga 189  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||       ||  |||||| |||||||||||||||||  || |    
T  14465303 caaaatccgatttattaaacaatctttcgaaatttgaatgattttgaataccacaagactttttttaagcgatgaagagtcttgattgaataccagaaaa 14465402  T
Q  190 cttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||| ||||||||||||||||||||||||||    
T  14465403 ctttttttaaatgacaaagagtcttgattgaata 14465436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 33656046 - 33656252
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  33656046 taagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 33656145  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgac--aaagagtcttga 216  Q
    ||||||||||||||||||||||||  |||        || |||| || ||||||||||||||||| |||||||||||| |||||||  ||||| ||||||    
T  33656146 aaatttgaatgattttgaataccattagattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaaaagaatcttga 33656245  T
Q  217 ttgaata 223  Q
    |||||||    
T  33656246 ttgaata 33656252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 32157962 - 32158107
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac-nnnnnnnaaatgatgaaaagtcttgattg 177  Q
    |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||        || |||| |   ||||||||||    
T  32157962 acaaaatccgtcaaaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaggggtcttgattg 32158061  T
Q  178 aatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||    
T  32158062 aataccacaagactttttttaaatgacaaagaatcttgattgaata 32158107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 6460932 - 6460789
Alignment:
Q  80 caaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaa 179  Q
    ||||||||  |||||||  ||||||||||||| ||||||||||||||||||||||||||||||| |||        ||||||| || |||||||||||||    
T  6460932 caaaatccatcaaaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccactagattttttttaaatgattaagagtcttgattgaa 6460833  T
Q  180 tacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||  || ||||||||| |||||||||||| |||||||||||||    
T  6460832 tacgacatgactttttttaaatgacaaagaatcttgattgaata 6460789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 27459015 - 27459158
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  ||||||| |||||||||||||||||||| |||| |||||||||||||||||||| ||||       || |||| || ||||||||||||    
T  27459015 acaaaatccatcaaaatctaatttattaaacaatccttcaaaatctgaatgattttgaataccactagac-ttttttaagtgattaagagtcttgattga 27459113  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||  |||||||||||| |||||||||||| |||| ||||||||    
T  27459114 atactacaagactttttttaaatgacaaagaatcttaattgaata 27459158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 43 - 195
Target Start/End: Complemental strand, 849334 - 849172
Alignment:
Q  43 ttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaatttgaatgatt 132  Q
    |||||||||||||| ||||| |  ||||||| ||||| |||||||||||||||| |          ||||||||||||||||||||||||||||||||||    
T  849334 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 849235  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttt 195  Q
    ||||||||||  ||||       || |||| || ||||||||||||||||| |||||||||||    
T  849234 ttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaagacttttt 849172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 9689787 - 9689657
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaaga 189  Q
    ||||||| ||||||| |||||||| |||||||||| ||||||||| |||||||||||||       || ||||||| ||||||||||||||||| | |      
T  9689787 caaaatctaatttatcaaacaatcattcgaaattt-aatgattttaaataccacaagactttttttaagtgatgaagagtcttgattgaataccacga-t 9689690  T
Q  190 cttttttaaaatgacaaagagtcttgattgaata 223  Q
     |||||| ||||||| ||||||||||||||||||    
T  9689689 gtttttttaaatgac-aagagtcttgattgaata 9689657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 40013897 - 40013953
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  40013897 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 40013953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 1511409 - 1511451
Alignment:
Q  81 aaaatcccacaaaatccaatttattaaacaatccttcgaaatt 123  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  1511409 aaaatcccacaaaatccaatctattaaacaattcttcgaaatt 1511451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 5273116 - 5273170
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| |||||||||| | |||||||||||||    
T  5273116 tcttgattgaatagcacaagactttttttaaatgacaaaaaatcttgattgaata 5273170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 4550452 - 4550508
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  4550452 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 4550508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 14000300 - 14000356
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||||| |||||| ||||  |||| |||||||||||||||    
T  14000300 agtcttgattgaataccacaagattttttttaaattgcaaaaagtcttgattgaata 14000356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 37013925 - 37013869
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  37013925 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 37013869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 21147076 - 21147022
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  21147076 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 21147022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 33656240 - 33656294
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  33656240 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 33656294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 26806578 - 26806611
Alignment:
Q  164 aaaagtcttgattgaatacctcaagactttttta 197  Q
    |||||||||||||||||||| |||||||||||||    
T  26806578 aaaagtcttgattgaataccacaagactttttta 26806611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 27458955 - 27459024
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca 98  Q
    |||||||| |||| |||||||||| ||  ||||| |  ||||||| ||||| ||||||||||||||||||    
T  27458955 taagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccacaaaatcca 27459024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 4240647 - 4240703
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||||| |||||| || |  |||| |||||||||||||||    
T  4240647 agtcttgattgaataccacaagattttttttaagttgcaaaaagtcttgattgaata 4240703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 5949120 - 5949064
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| ||| |||||||||||    
T  5949120 agtcttgattgaataccacaagactttttttaagttgcaaaaagttttgattgaata 5949064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 16894055 - 16894111
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||   ||||| | |||||||||||    
T  16894055 agtcttgattgaataccacaagactttttttaaattggaaagaattttgattgaata 16894111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 17518510 - 17518474
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  17518510 aaaaatcttgattgaataccacaagacttttttaaaa 17518474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 10728653 - 10728851
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  10728653 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttccaaattt 10728752  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||| |||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10728753 gaatgattttaaataccacaagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 10728851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 37455055 - 37454857
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  37455055 atctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaattcaatttattaaacaatcattcgaaattt 37454956  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  37454955 gaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagaatcttgattgaata 37454857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 39038229 - 39038036
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 129  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  39038229 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaattcttcgaaatttgaatg 39038130  T
Q  130 attttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||| ||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39038129 attttggataccacaagacttttttaaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 39038036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 44906515 - 44906723
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaat----------ccaatttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||          |||||||||||||||||||    
T  44906515 atctcaagaaatctcatcttttcatgaaagacattttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatcc 44906614  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44906615 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 44906714  T
Q  215 gattgaata 223  Q
    |||||||||    
T  44906715 gattgaata 44906723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 36674132 - 36674340
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  36674132 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 36674231  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674232 ttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 36674331  T
Q  215 gattgaata 223  Q
    |||||||||    
T  36674332 gattgaata 36674340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 48379361 - 48379155
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  48379361 atctcaagaaatctgatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatcc 48379262  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48379261 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtctagattgaatacctcaagacttttttaaaatgacaaagagtctt 48379162  T
Q  215 gattgaa 221  Q
    |||||||    
T  48379161 gattgaa 48379155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 50762062 - 50762260
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||| |||||||||     
T  50762062 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttatcaaacaatcattcgaaatta 50762161  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       |||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50762162 gaatgattttgaataccacaagactttttttaaattatgaaaagtcatgattgaatatctcaagacttttttaaaatgacaaagagtcttgattgaata 50762260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 11431730 - 11431522
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  11431730 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaatccaatttattaaacaatcc 11431631  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11431630 ttcgaaatttaaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 11431531  T
Q  215 gattgaata 223  Q
     ||||||||    
T  11431530 tattgaata 11431522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 34484032 - 34484240
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  34484032 atctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 34484131  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34484132 ttcgaaatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 34484231  T
Q  215 gattgaata 223  Q
    |||||||||    
T  34484232 gattgaata 34484240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 10660688 - 10660531
Alignment:
Q  66 ttaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaa 165  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||    
T  10660688 ttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaatactttttttaaatgatgaa 10660589  T
Q  166 aagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10660588 aagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 10660531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 40897343 - 40897140
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 119  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||          |||||||||||||||||||||    
T  40897343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 40897244  T
Q  120 aatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 219  Q
    ||||||||||||||||||||||| |||||       || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40897243 aatttgaatgattttgaataccataagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgaatg 40897144  T
Q  220 aata 223  Q
    ||||    
T  40897143 aata 40897140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 17946492 - 17946284
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  17946492 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 17946393  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    || |||||||||||||||||||||| ||| ||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17946392 tttgaaatttgaatgattttgaatatcacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatctt 17946293  T
Q  215 gattgaata 223  Q
    |||||||||    
T  17946292 gattgaata 17946284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 32580380 - 32580173
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||          ||||||||||||||||    
T  32580380 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccctcaaaatccatcaaaatccaatttattaaacaatcc 32580281  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  32580280 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtctt-attgaatacctcaagacttttttaaaatgacaaagagcctt 32580182  T
Q  215 gattgaata 223  Q
    ||| |||||    
T  32580181 gatcgaata 32580173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 52810582 - 52810374
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||||||||||||||||          |||||||||||||||     
T  52810582 atctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacgctacaaaatcccacaaaatccatcaaaattcaatttattaaacaatca 52810483  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52810482 ttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtctt 52810383  T
Q  215 gattgaata 223  Q
    |||||||||    
T  52810382 gattgaata 52810374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 23753409 - 23753596
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||          |||||||||||||||||||||||||||    
T  23753409 atctcaagaaatctcatcttt-catgaaagactttttcttgttaaaattacactacaaaatcc----------aatttattaaacaatccttcgaaattt 23753497  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23753498 gaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattgaata 23753596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 26107465 - 26107260
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||| |||||| || ||||||| ||||||||||||||||||||| |||||||||||          ||||||||||||||||    
T  26107465 atctcaagaaatctcatctttttatgaaatactttttcttgttaaaattacactacaaaatcacacaaaatccatcaaaatccaatttattaaacaatcc 26107366  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26107365 ttcgaaatttgaatgattttgaataccacaagactttttttaattgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatctt 26107266  T
Q  215 gattga 220  Q
    ||||||    
T  26107265 gattga 26107260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 52617973 - 52618175
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||| |||||||||      || |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  52617973 atctcaagaaatctcatctttttatgaaagac------ttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 52618066  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52618067 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 52618166  T
Q  215 gattgaata 223  Q
    |||||||||    
T  52618167 gattgaata 52618175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 31646288 - 31646494
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||| |||||||||||     
T  31646288 atctcaagaaatctcat--tttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattcattaaacaatct 31646385  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  31646386 ttcgaaatttgaatgattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacgtcaagacttttttaaaataacaaagagtctt 31646485  T
Q  215 gattgaata 223  Q
    |||||||||    
T  31646486 gattgaata 31646494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 54629048 - 54628839
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  54629048 atctcaagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 54628949  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaa-tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtct 213  Q
    || ||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54628948 tttgaaatttgaatgattttgaataccacaagatttttttttttgtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtct 54628849  T
Q  214 tgattgaata 223  Q
    ||||||||||    
T  54628848 tgattgaata 54628839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 18749816 - 18749608
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  18749816 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 18749717  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||| || |||||||||||||||||||||||||| |||  || ||| ||    
T  18749716 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtttttattgaatacctcaagacttttttaaagtgatgaaaagtttt 18749617  T
Q  215 gattgaata 223  Q
    |||||||||    
T  18749616 gattgaata 18749608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 40 - 223
Target Start/End: Original strand, 51737743 - 51737937
Alignment:
Q  40 atcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatccttcgaaatttgaatg 129  Q
    ||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  51737743 atctttttatgaaagactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 51737842  T
Q  130 attttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagac-ttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||       || |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  51737843 attttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttttaaaatgataaagagtcttgattgaata 51737937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 50903242 - 50903453
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| |||||||||||| ||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  50903242 atctcaagaaatctcatattttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 50903341  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnn---aaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagt 211  Q
    |||  |||||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50903342 ttcttaatttgaatgattttgaataccacaagacttttttttttaaatgataaaaagtcttgattgaataccttaagacttttttaaaatgacaaagagt 50903441  T
Q  212 cttgattgaata 223  Q
    ||||||||||||    
T  50903442 cttgattgaata 50903453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 44276571 - 44276385
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgatt 132  Q
    ||||||||| | |||||||||||  ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||    |||||||||||||    
T  44276571 aaatctcatgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatccaatttattaaacaatcct----aatttgaatgatt 44276476  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||  ||||       || ||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  44276475 ttgaataccatgagactttttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagttttaattgaata 44276385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 34 - 223
Target Start/End: Complemental strand, 20833187 - 20832988
Alignment:
Q  34 aatctcatcttttcatgaaagacattttcttattaaaattacacta----------caaaatcccacaaaatccaatttattaaacaatccttcgaaatt 123  Q
    ||||| |||||||||||||| || ||||||| ||||||||||||||          ||||||||  ||||||||||||||||||||||||||||  ||||    
T  20833187 aatcttatcttttcatgaaatactttttcttgttaaaattacactaataaatctcacaaaatccatcaaaatccaatttattaaacaatccttccgaatt 20833088  T
Q  124 tgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||||||||       || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20833087 tgaatgattttgaataccacaagactttttttaagtgatgaaaattcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattaaata 20832988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 19254027 - 19253823
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  19254027 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcg 19253928  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  19253927 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 19253828  T
Q  219 gaata 223  Q
    |||||    
T  19253827 gaata 19253823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 20498409 - 20498205
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  20498409 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 20498310  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  20498309 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 20498210  T
Q  219 gaata 223  Q
    |||||    
T  20498209 gaata 20498205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 6975922 - 6975745
Alignment:
Q  43 ttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacca 142  Q
    ||||||||||||||  |||| |  | |||||  |||| ||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  6975922 ttttcatgaaagactgtttcatgctcaaattttactagaaaatcccacaaattccaatttagtaaataattcttcgaaatttgaatgattttgaatacca 6975823  T
Q  143 caagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||       |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  6975822 caagacttttt--aaatgatgaaaagtcttgattgaatacctcaagact-ttttaaaataacaaagagtcttgattgaata 6975745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 6035055 - 6035263
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||| ||||||||| ||||| |  |||||||  |||| ||||||||||||||||||          |||||||||||| | |    
T  6035055 atcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctaatttattaaacattgc 6035154  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||| ||| ||||       || ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  6035155 ttcgaaatttgaatgattttgaatatcacgagactttttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagactctt 6035254  T
Q  215 gattgaata 223  Q
    |||||||||    
T  6035255 gattgaata 6035263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 996092 - 996296
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  996092 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 996191  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || | ||||||||||||||| |||||||||||| |||||| ||||| ||||||||    
T  996192 aaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaagacttttttgaaatgataaagaatcttgatt 996291  T
Q  219 gaata 223  Q
    |||||    
T  996292 gaata 996296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 3999651 - 3999855
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||| ||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  3999651 taagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 3999750  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| |||        || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  3999751 aaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 3999850  T
Q  219 gaata 223  Q
    |||||    
T  3999851 gaata 3999855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 10139152 - 10139356
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  10139152 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 10139251  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||| || || ||||||||    
T  10139252 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgataaggaatcttgatt 10139351  T
Q  219 gaata 223  Q
    |||||    
T  10139352 gaata 10139356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 39842501 - 39842619
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 129  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||  ||||||| ||||||||||||||| ||||||||||||||||    
T  39842501 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacattacaaaatccgtcaaaatctaatttattaaacaattcttcgaaatttgaatg 39842600  T
Q  130 attttgaataccacaagac 148  Q
    |||||||||| ||| ||||    
T  39842601 attttgaatatcacgagac 39842619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 33807804 - 33808009
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  33807804 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 33807903  T
Q  119 aaatttgaatgattttgaataccacaagac-nnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgat 217  Q
    ||||||||||||||||||||||||| ||||        || |||| || ||||||||||||||||| |||||||||||| |||||||||||| |||| ||    
T  33807904 aaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttaat 33808003  T
Q  218 tgaata 223  Q
    ||||||    
T  33808004 tgaata 33808009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 6589764 - 6589560
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          |||||||||| ||| |||||    
T  6589764 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaataattcttcg 6589665  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| |||||||||||| ||||||||| || | ||||||    
T  6589664 aaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagactttttttaaatgacaaggaatattgatt 6589565  T
Q  219 gaata 223  Q
    |||||    
T  6589564 gaata 6589560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 37820479 - 37820687
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||| ||||||||| ||||| |  ||||||| ||||  ||||||||||||||||||          ||||||||||||||||    
T  37820479 atcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 37820578  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||| ||||       || |||| || | ||||||||||||||| ||||| |||||| |||||||||||| ||||    
T  37820579 ttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaagaatttttttaaatgacaaagaatctt 37820678  T
Q  215 gattgaata 223  Q
    |||||||||    
T  37820679 gattgaata 37820687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 539481 - 539586
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaaga 189  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||    
T  539481 caaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaaga 539580  T
Q  190 cttttt 195  Q
    ||||||    
T  539581 cttttt 539586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 195
Target Start/End: Original strand, 3206211 - 3206387
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| |||||||  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  3206211 taagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 3206310  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttt 195  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||    
T  3206311 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacttttt 3206387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 40247044 - 40246840
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||| |||||||| |||||||||||||| ||||| |   |||||| ||||| ||||||||||||||||||          |||||||||||||||||||     
T  40247044 taaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcc 40246945  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||| |||||||| |||||||||||| ||||||||    
T  40246944 aaatttgaatgattttgaataccactagactttttttaactgattaatagtcttgattgaataccacaaaactttttttaaatgacaaagaatcttgatt 40246845  T
Q  219 gaata 223  Q
    |||||    
T  40246844 gaata 40246840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 27899534 - 27899367
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaat 128  Q
    |||||||| |||| |||||||||||||| ||||| |  ||||||| ||||| ||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  27899534 taagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatctgatttattaaacaatccttcgaaatttgaat 27899435  T
Q  129 gattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagactttttt 196  Q
    ||||||||||||||| ||||       ||||||  || |||||||||||||||||  | |||||||||    
T  27899434 gattttgaataccaccagactttttttaaatgacaaagagtcttgattgaataccatatgactttttt 27899367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 29030145 - 29030002
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||       || |||| || ||||||||||||    
T  29030145 acaaaatccatcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac-ttttttaagtgattaagagtcttgattga 29030047  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||    
T  29030046 ataccacaagactttttttaaatgacaaagagtcttaattgaata 29030002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 33996547 - 33996751
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||| || |||||| ||||| |  ||||||| ||||| |||||||| |||||||||          ||||||||||||||||||||    
T  33996547 taagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcg 33996646  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||||||||||||||||||||||  ||        || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  33996647 aaatttgaatgattttgaataccactggattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 33996746  T
Q  219 gaata 223  Q
    |||||    
T  33996747 gaata 33996751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 35337930 - 35337731
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaat 122  Q
    ||||||||| ||||||||||| || ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||||||    
T  35337930 aaatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 35337832  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||  ||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||||||||||||| || ||||||||||||    
T  35337831 ttgaatttttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacttttttaaaatgacaaggaatcttgattgaat 35337732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 44762039 - 44762247
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| ||||||| |||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||    
T  44762039 atcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 44762138  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||| |||||| ||||| |||||||| ||||       || |||| || ||||||||||||||||  || ||||||||| |||||||||||| ||||    
T  44762139 ttcgaaacttgaataattttaaataccactagactttttttaagtgattaagagtcttgattgaatactacatgactttttttaaatgacaaagaatctt 44762238  T
Q  215 gattgaata 223  Q
    |||||||||    
T  44762239 gattgaata 44762247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 54625796 - 54625588
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| ||||||||||| || ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||    
T  54625796 atcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 54625697  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||||||| |||||||||||||| ||||       || |||| || ||||||||||||||||  ||||| |||||| ||||||||| || | ||    
T  54625696 ttcgaaatttgaataattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaagattttttttaaatgacaacgaatatt 54625597  T
Q  215 gattgaata 223  Q
    |||||||||    
T  54625596 gattgaata 54625588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 15492889 - 15493061
Alignment:
Q  45 ttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcg----aaatttgaatgattttgaatac 140  Q
    |||||||||||  ||||||| |||||||| ||||| || |||| |||||||||||||||||||| ||| |||      ||||||||||||||||||||||    
T  15492889 ttcatgaaagattttttcttgttaaaatttcactagaatatcctacaaaatccaatttattaaataattcttaattaaaaatttgaatgattttgaatac 15492988  T
Q  141 cacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||  ||||       || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15492989 catgagacattttt-aagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtctt 15493061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 25418566 - 25418362
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||| |||||||| ||||||||||| || ||||| |   |||||| ||||| ||||||||||||||||||          ||||||||||||||||||      
T  25418566 taaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttc 25418467  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||| | |||        || |||| |||||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  25418466 aaatttgaatgattttgaataccgctagattttttgtaagtgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 25418367  T
Q  219 gaata 223  Q
    |||||    
T  25418366 gaata 25418362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 29448864 - 29449068
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||  |  |||||||  |||| ||||||||||||||||||          ||||||||||||||||||||    
T  29448864 taagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 29448963  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || ||||  | ||||||||||||||| | |||||||||||  ||||||||| || ||||||||    
T  29448964 aaatttgaatgattttgaataccactagactttttttaagtgattgagagtcttgattgaatatcacaagactttttgtaaatgacaaggaatcttgatt 29449063  T
Q  219 gaata 223  Q
    |||||    
T  29449064 gaata 29449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 53929192 - 53929336
Alignment:
Q  77 ctacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgatt 176  Q
    |||||||||||  |||||||  ||||||||||||||| ||||| |||| |||||||||||||||||| ||||       || |||| || ||||||||||    
T  53929192 ctacaaaatccatcaaaatcttatttattaaacaatcgttcgatatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgatt 53929291  T
Q  177 gaatacctcaagacttttttaaaatgacaaagagtcttgattgaa 221  Q
    ||||||| |||||||||||| |||||||||||| |||||||||||    
T  53929292 gaataccacaagactttttttaaatgacaaagaatcttgattgaa 53929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 1440020 - 1440163
Alignment:
Q  81 aaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaat 180  Q
    |||||||  |||||||  |||||||||||||||||| |||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||    
T  1440020 aaaatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaat 1440119  T
Q  181 acctcaagac-ttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||| ||| || |||||| |||||||||||| |||||||||||||    
T  1440120 accacaaaacttttttttaaatgacaaagaatcttgattgaata 1440163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 52114658 - 52114524
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaa-tgatgaaaagtcttgattgaatacctcaag 188  Q
    |||||||  ||||||||||||||||| |||||||||||| |||||||||||||| ||||        || |||| |||||||||||||||||||| ||||    
T  52114658 caaaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccactagacttttttttaagtgattaaaagtcttgattgaataccacaag 52114559  T
Q  189 acttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||| |||||||||||| ||||| |||||||    
T  52114558 actttttttaaatgacaaagaatcttggttgaata 52114524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 18749630 - 18749566
Alignment:
Q  159 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749630 tgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 18749566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 51699557 - 51699689
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaaga 189  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||| |||        || |||| || ||||||||||||||||| |||||    
T  51699557 caaaatcttatttattaaccaatccttcgaaatttgaatgattttgaataccactaga-tttttttaagtgattaagagtcttgattgaataccacaaga 51699655  T
Q  190 cttttttaaaatgacaaagagtcttgattgaata 223  Q
     |||||| |||||||||||| |||||||||||||    
T  51699656 ttttttttaaatgacaaagaatcttgattgaata 51699689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 12103729 - 12103625
Alignment:
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||  ||||       || ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  12103729 aaatttgaatgattttgaataccatgagactttttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagaatcttaatt 12103630  T
Q  219 gaata 223  Q
    |||||    
T  12103629 gaata 12103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 23535866 - 23535946
Alignment:
Q  68 aaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 148  Q
    |||||| ||||| |||||||||| ||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23535866 aaaatttcactagaaaatcccactaaatctaattaattaaacgatccttctaaatttgaatgattttgaataccacaagac 23535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 52080079 - 52080003
Alignment:
Q  67 taaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 143  Q
    ||||||| || || ||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  52080079 taaaatttcattagaaaatcccacaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccac 52080003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 206
Target Start/End: Complemental strand, 55235322 - 55235198
Alignment:
Q  81 aaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaat 180  Q
    |||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||  ||||       || ||||||| ||| ||||||||||    
T  55235322 aaaatccatcaaaaaccaatttattaaacaatctttcgaaatttgaatgattttgaatatcatgagac-ttttttaattgatgaagagttttgattgaat 55235224  T
Q  181 acctcaagacttttttaaaatgacaa 206  Q
    |||||  |||||||||||||||||||    
T  55235223 acctcgtgacttttttaaaatgacaa 55235198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 45863045 - 45862983
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcc 87  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  45863045 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 45862983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 5825262 - 5825139
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaa----------aatccaatttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||| | ||||| |  || |||| ||||| ||||||||||||          |||||||||||||||||||||||||     
T  5825262 taagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaaacaatccttca 5825163  T
Q  119 aaatttgaatgattttgaatacca 142  Q
    ||||||||||||||||||||||||    
T  5825162 aaatttgaatgattttgaatacca 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 22057902 - 22057757
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||  |||||||||||||||| ||||||||||||||||||| |||||||| |||        || |||| || ||||||||| ||    
T  22057902 acaaaatccatcaaaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccactagattttttttaagtgatcaagagtcttgatgga 22057803  T
Q  179 atacctcaag-acttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| ||||   |||||| |||||||||||| |||||||||||||    
T  22057802 ataccacaagttttttttttaaatgacaaagaatcttgattgaata 22057757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 6131239 - 6131308
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca 98  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||    
T  6131239 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 6131308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 27240408 - 27240453
Alignment:
Q  178 aatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  27240408 aatacctcaaaacttttttaaaatgacaaagagtcttgattgaata 27240453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 6131325 - 6131381
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||||    
T  6131325 agtcttgattgaataccacaaaactttttttaaatgacaatgagtcttgattgaata 6131381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 10660545 - 10660489
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  10660545 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 10660489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 27899430 - 27899382
Alignment:
Q  175 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  27899430 ttgaataccaccagactttttttaaatgacaaagagtcttgattgaata 27899382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 36674326 - 36674382
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  36674326 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 36674382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 3206394 - 3206448
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| |||||||||||| ||||   |||||||||||||||||||    
T  3206394 tcttgattgaataccacaagactttttttaaattgaaaagagtcttgattgaata 3206448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 23753584 - 23753638
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  23753584 tcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 23753638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 44276392 - 44276343
Alignment:
Q  174 attgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||| |||||||||||| |||| |||||||||||| ||||||||    
T  44276392 attgaataccacaagactttttttaaattacaaagagtcttaattgaata 44276343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 11431536 - 11431480
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||| |||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  11431536 agtctttattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 11431480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 18749580 - 18749524
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  18749580 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 18749524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 27240439 - 27240495
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  27240439 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 27240495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 27593234 - 27593198
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  27593234 aaaagtcttgattgaatacctaaagacttttttaaaa 27593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 36786053 - 36786017
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  36786053 aaaagtcttgattgaatacctaaagacttttttaaaa 36786017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 44906709 - 44906765
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  44906709 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 44906765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 50762246 - 50762302
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  50762246 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 50762302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 50903439 - 50903495
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  50903439 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 50903495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 54628853 - 54628797
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  54628853 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 54628797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 6975759 - 6975712
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||| |||||||||||| || | ||||||||||||    
T  6975759 agtcttgattgaataccacaagactttttttaagttacaaagagtctt 6975712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 1440151 - 1440204
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | ||||||||||||||| ||| ||| |||||||||||||||    
T  1440151 tcttgattgaataacacaagacttttttaaattga-aaatagtcttgattgaata 1440204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 10139344 - 10139398
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  10139344 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 10139398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 19253835 - 19253781
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  19253835 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 19253781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 35337743 - 35337689
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  35337743 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 35337689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 37820675 - 37820729
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  37820675 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 37820729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 44762235 - 44762289
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  44762235 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 44762289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 996248 - 996337
Alignment:
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||       ||||||| || | ||||||||||||| | |||||||||||| || ||  |||||||||||||||||||    
T  996248 ttgaataccacaagacttttttgaaatgataaagaatcttgattgaataacacaagactttttttaattg-gaaagagtcttgattgaata 996337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 10216163 - 10216196
Alignment:
Q  164 aaaagtcttgattgaatacctcaagactttttta 197  Q
    |||||||||||||||||||| |||||||||||||    
T  10216163 aaaagtcttgattgaataccacaagactttttta 10216196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 10225671 - 10225704
Alignment:
Q  164 aaaagtcttgattgaatacctcaagactttttta 197  Q
    |||||||||||||||||||| |||||||||||||    
T  10225671 aaaagtcttgattgaataccacaagactttttta 10225704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 2024217 - 2024161
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||| |||| | ||||| | |||| |||||||||| |||||||||||||||    
T  2024217 agtcttgattaaatatcacaagattatttttaaatgacaaatagtcttgattgaata 2024161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 6131367 - 6131423
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| | ||| |||||||| ||||||||| |  |||||||||||||    
T  6131367 agtcttgattgaataacacaaaactttttttaaatgacaatggatcttgattgaata 6131423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 6589570 - 6589518
Alignment:
Q  171 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| | |||||||||||| |||| | |||||||||| ||||||||    
T  6589570 ttgattgaataacacaagactttttttaaattagaaagagtcttaattgaata 6589518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 31646480 - 31646536
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||  ||||||||||| || |  |||| |||||||||||||||    
T  31646480 agtcttgattgaataccataagactttttttaagttgcaaaaagtcttgattgaata 31646536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 39338299 - 39338335
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  39338299 aaaagtctttattgaatacctaaagacttttttaaaa 39338335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 44276357 - 44276301
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||| |||||||||| || ||||||||| |||| ||||| ||| |||||||||||    
T  44276357 agtcttaattgaataccacatgactttttttaaattacaaaaagttttgattgaata 44276301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 51737912 - 51737952
Alignment:
Q  156 aaatgatgaaaagtcttgattgaatacctcaagactttttt 196  Q
    ||||||| || ||||||||||||||||| ||||||||||||    
T  51737912 aaatgataaagagtcttgattgaataccacaagactttttt 51737952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 54625598 - 54625546
Alignment:
Q  171 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  54625598 ttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 54625546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 4e-77; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 28740297 - 28740495
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  28740297 atctcaagaaatctcatctttttatgaaagactttttcttgttaaaattacaccacaaaatccatcaaaatccaatttattaaacaatccttcgaaattt 28740396  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28740397 gaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 28740495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 50 - 223
Target Start/End: Complemental strand, 7026775 - 7026602
Alignment:
Q  50 gaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacn 149  Q
    ||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7026775 gaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagact 7026676  T
Q  150 nnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7026675 ttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 7026602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 13833436 - 13833634
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13833436 atctcaagaaatctcatcttgtcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcaaaattt 13833535  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||| |||||       || |||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||||    
T  13833536 gaatgattttgaataccagaagactttttttaagtgatgaaaagtcttgattgaatatatcaagacttttttaaaatgataaaaagtcttgattgaata 13833634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 28844761 - 28844553
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||          ||||||||||||||||    
T  28844761 atctcaagaaatctcatctttttatgaaagactttttcttattaaaattacactacaaaattccacaaaatccatcaaaatctaatttattaaacaatcc 28844662  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28844661 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 28844562  T
Q  215 gattgaata 223  Q
    |||||||||    
T  28844561 gattgaata 28844553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 3463868 - 3463669
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||| ||    
T  3463868 atctcaagaaatctcatattttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttgaaaatt 3463769  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagag-tcttgattgaata 223  Q
    |||||||||| |||||||||||||       |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  3463768 gaatgattttaaataccacaagactttttttaaatgatgaaaagtcttgattgaacacctcaagacttttttaaaatgacaaagagttcttgattgaata 3463669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 18177473 - 18177265
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||| || |||||| ||||||| |||||||||||||||||||||||||||||||||          ||| ||||||||||||    
T  18177473 atctcaagaaatctcatctttttattaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatcc 18177374  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18177373 ttcgaaatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 18177274  T
Q  215 gattgaata 223  Q
    |||||||||    
T  18177273 gattgaata 18177265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 25288365 - 25288157
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaat----------ccaatttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||          |||||||||||||||||||    
T  25288365 atctcaagaaatctcatcttttcatgaaagacgttctcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatcc 25288266  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||||||||||||||||||||||||||        || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25288265 ttcgaaatttgaatgattttgaataccacaagattttttttaagtgatgaaaagtcttgaatgaatacctcaagacttttttaaaatgacaaagagtctt 25288166  T
Q  215 gattgaata 223  Q
    |||||||||    
T  25288165 gattgaata 25288157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 33135828 - 33135621
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| |||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  33135828 atctcaagaaatctcatttttt-atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 33135730  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||| ||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33135729 ttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 33135630  T
Q  215 gattgaata 223  Q
    |||||||||    
T  33135629 gattgaata 33135621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 10657612 - 10657404
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||| |||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||          |||||||||||||||     
T  10657612 atctcaagaaatttcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatca 10657513  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||    
T  10657512 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaaggatctt 10657413  T
Q  215 gattgaata 223  Q
    |||||||||    
T  10657412 gattgaata 10657404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 26788989 - 26788782
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| |||||||||||||||   ||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  26788989 atctcaagaaatctcatctt---atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 26788893  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnna--aatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtc 212  Q
    ||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26788892 ttcaaaatttgaatgattttgaataccacaagactttttttttgaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtc 26788793  T
Q  213 ttgattgaata 223  Q
    |||||||||||    
T  26788792 ttgattgaata 26788782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 10125304 - 10125504
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    ||||||||||||||| | |||| ||||||||| ||||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||    
T  10125304 atcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcactaaaaaatcccacaaaattcaatttattaaacaatcctttgaaattt 10125403  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctc--aagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||||||||||| ||  ||||       || ||||||||||| ||||||||||| |||  |||||||||||||||||||||||||||||||||||||    
T  10125404 gaatgattttgaatatcatgagactttttttaagtgatgaaaagttttgattgaatatctcaaaagacttttttaaaatgacaaagagtcttgattgaat 10125503  T
Q  223 a 223  Q
    |    
T  10125504 a 10125504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 6224576 - 6224760
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 129  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||          ||||||||||| |||||||||||||||||||     
T  6224576 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc----------aatttattaaataatccttcgaaatttgaata 6224665  T
Q  130 attttgaataccacaagacnnnnnnnaaa-tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||       ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6224666 attttgaataccacaagactttttttaaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattaaata 6224760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 89 - 223
Target Start/End: Complemental strand, 3574979 - 3574845
Alignment:
Q  89 acaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaag 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       || ||||||||||||||||||||||||||||||    
T  3574979 acaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagactttttttaagtgatgaaaagtcttgattgaatacctcaag 3574880  T
Q  189 acttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||  |||||||||||||||    
T  3574879 acttttttaaaatgacaattagtcttgattgaata 3574845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 16269893 - 16269689
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  16269893 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 16269794  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  16269793 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 16269694  T
Q  219 gaata 223  Q
    |||||    
T  16269693 gaata 16269689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 24776557 - 24776353
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  24776557 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 24776458  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  24776457 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 24776358  T
Q  219 gaata 223  Q
    |||||    
T  24776357 gaata 24776353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 379125 - 378935
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgatt 132  Q
    |||||||||||||||||||| ||  ||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||    
T  379125 aaatctcatcttttcatgaacgattttttcttgttaaaattacactacaaaatctatcaaaatccaatttattaaacaatccttcaaaatttgaatgatt 379026  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||  | ||       ||||||  |||||| ||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  379025 ttgaataccatgaaactttttttaaatgagaaaaagttttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 378935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 12407586 - 12407378
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||    
T  12407586 atcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 12407487  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||| ||||||||||||||||||||||||| ||||       || |||| || ||||| ||||||||||| |||||||||||| |||||||||||| ||||    
T  12407486 ttcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaagactttttttaaatgacaaagaatctt 12407387  T
Q  215 gattgaata 223  Q
    |||||||||    
T  12407386 gattgaata 12407378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 20605438 - 20605234
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  20605438 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 20605339  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  20605338 aaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 20605239  T
Q  219 gaata 223  Q
    |||||    
T  20605238 gaata 20605234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 31170632 - 31170836
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          |||||||||||||||||| |    
T  31170632 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttgg 31170731  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  31170732 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 31170831  T
Q  219 gaata 223  Q
    |||||    
T  31170832 gaata 31170836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 215249 - 215437
Alignment:
Q  32 gaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgat 131  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||||||||| |   | |  ||   || ||||||||||| ||| ||||||||||    
T  215249 gaaatctcatcttttcatgaaagactttttctg-ttaaaattacactacaaaatccaatttatt--aaacaatcaaacaatcctttgaagtttgaatgat 215345  T
Q  132 tttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||| ||||       || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  215346 tttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttaaaattgacaaagagtcttgattgaata 215437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 14198585 - 14198789
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||  ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  14198585 taagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 14198684  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||||||||||||||||||||||  |||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| | ||||||    
T  14198685 aaatttgaatgattttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaattttgatt 14198784  T
Q  219 gaata 223  Q
    |||||    
T  14198785 gaata 14198789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 22551771 - 22551975
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| ||||||||||| || ||||| |  ||||||| ||||| ||||||||||||||||||          ||||| ||||||||| ||||    
T  22551771 taagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttaataaacaatcattcg 22551870  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||||||| |||||||||||||| ||||       || |||| |||||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  22551871 aaatttgaataattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 22551970  T
Q  219 gaata 223  Q
    |||||    
T  22551971 gaata 22551975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 43847848 - 43847644
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| ||||||||| |||| ||||| |  ||||||| ||||| ||||| ||||||||||||          ||||||||||||||||||||    
T  43847848 taagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaattctgatttattaaacaatccttcg 43847749  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||||||||||||||||||| || ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  43847748 aaatttgaatgattttgaatacaactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 43847649  T
Q  219 gaata 223  Q
    |||||    
T  43847648 gaata 43847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 223
Target Start/End: Complemental strand, 35317265 - 35317060
Alignment:
Q  28 ttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttc 117  Q
    ||||||||||| || |||||||||||||| ||||| |  ||||||| ||||| ||||| ||||||||||||          |||||||||||||||||||    
T  35317265 ttaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttc 35317166  T
Q  118 gaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgat 217  Q
    |||||||||||||||||||||||||| ||||       || |||| || |||||||||||||||   |||||||||||| |||||||||||| |||||||    
T  35317165 gaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatattacaagactttttttaaatgacaaagaatcttgat 35317066  T
Q  218 tgaata 223  Q
    ||||||    
T  35317065 tgaata 35317060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 305473 - 305677
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| |||||| |||||||||||          ||||||||||||||| |||     
T  305473 taagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaatccatcgaaatctgatttattaaacaatcattca 305572  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||| | ||||||||    
T  305573 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacttttttcaaatgacaaataatcttgatt 305672  T
Q  219 gaata 223  Q
    |||||    
T  305673 gaata 305677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 5093055 - 5093259
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||| ||||||||| ||||| |  ||||||| || || ||||||||||||||||||          |||||||||||||||||||     
T  5093055 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttca 5093154  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||||||||||||||||||| || ||||       || |||| ||  |||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  5093155 aaatttgaatgattttgaatactactagactttttttaagtgattaagcgtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 5093254  T
Q  219 gaata 223  Q
    |||||    
T  5093255 gaata 5093259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 44765917 - 44765773
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||       || |||| || ||||| ||||||    
T  44765917 acaaaatccatcaaaatcttatttattaaacaatctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattga 44765818  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||    
T  44765817 ataccacaagactttttttaaatgacaaagaatcttgattgaata 44765773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 223
Target Start/End: Complemental strand, 32125456 - 32125248
Alignment:
Q  28 ttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttc 117  Q
    |||||||||||||| |||||||||||||| ||||| |  |||||||  |||| ||||||||||||||||||          |||||||||||||||||||    
T  32125456 ttaagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttc 32125357  T
Q  118 gaaatttgaatgattttgaataccacaagacnnnnnnnaaatg---atgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||  |||       |||||   || || ||||||||||||||||| || ||||||||| |||||||||||| | ||    
T  32125356 gaaatttgaatgattttgaataccacttgactttttttaaatgatcattaagagtcttgattgaataccacatgactttttttaaatgacaaagaatttt 32125257  T
Q  215 gattgaata 223  Q
    |||||||||    
T  32125256 gattgaata 32125248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 26601255 - 26601412
Alignment:
Q  66 ttaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaa 165  Q
    ||||| || ||||| ||||||||||||||||  ||||||||||||| | |||||||||||||||||||||||||||||  |||       || |||| ||    
T  26601255 ttaaagtttcactagaaaatcccacaaaatctgatttattaaacaaacattcgaaatttgaatgattttgaataccacgtgactttttttaagtgattaa 26601354  T
Q  166 aagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
     ||||||||||||||||  ||||||||||||  |||||||||||||||||||| ||||    
T  26601355 gagtcttgattgaatactacaagacttttttttaatgacaaagagtcttgattaaata 26601412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 1789584 - 1789440
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       || |||| || ||| ||||||||    
T  1789584 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagttttgattga 1789485  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||| |  ||||||||||| |||||||||||| |||||||||||||    
T  1789484 atatcataagactttttttaaatgacaaagaatcttgattgaata 1789440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 9120328 - 9120124
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcc----------aatttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||  ||| | || ||||||| ||||| |||||||||||||||||          |||||||||||||||||||      
T  9120328 taagaaatctcatgttttcatgaaagatttttccatactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttta 9120229  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||| |||||||||||||||| ||| |||        || |||| || | ||||||||||||| | |||||||||||||||||   ||||||||||||||    
T  9120228 aaatctgaatgattttgaatatcactagattttttttaagtgattaagaatcttgattgaataacacaagacttttttaaaattggaaagagtcttgatt 9120129  T
Q  219 gaata 223  Q
    |||||    
T  9120128 gaata 9120124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 43078769 - 43078653
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaa----------tccaatttattaaacaatcc 114  Q
    |||| ||||||||| ||||||| ||||||||| ||||| | |||||||||||||| ||||||||||||||          |||||||||||||||||||     
T  43078769 atctcaagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaaaatccatgaaaatccaatttattaaacaatca 43078670  T
Q  115 ttcgaaatttgaatgat 131  Q
    |||||||||||||||||    
T  43078669 ttcgaaatttgaatgat 43078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 20605206 - 20605150
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  20605206 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaata 20605150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 21370631 - 21370687
Alignment:
Q  92 aaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 148  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  21370631 aaatccaatttatcaaacaatacttcaaaatttgaatgattttgaataccacaagac 21370687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 13833609 - 13833676
Alignment:
Q  156 aaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||| |||||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  13833609 aaatgataaaaagtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 13833676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 7026616 - 7026560
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  7026616 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 7026560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 26788796 - 26788740
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  26788796 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 26788740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 8172278 - 8172134
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||| ||||||||||||||||||||  |||||||| ||||  ||||| ||| ||||||||||  ||       || |||  || |||||||||| |    
T  8172278 acaaaatctcacaaaatccaatttattaagaaatccttcaaaatcagaatgttttcgaataccacataacttttttgaagtgacaaagagtcttgattaa 8172179  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| |||||||||| | || ||| ||||||| |||||| ||||    
T  8172178 ataccacaagacttttcttaagtgataaagagtattgattaaata 8172134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 10125490 - 10125545
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||||||||||||| ||| |||||||| ||||  |||||||||||||||||||    
T  10125490 agtcttgattgaataccacaaaactttttttaaattgcaaagagtcttgattgaat 10125545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 24776365 - 24776311
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| |||| | |||||||||||||||||||    
T  24776365 tcttgattgaataacacaagactttttttaaattagaaagagtcttgattgaata 24776311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 215423 - 215479
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  215423 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 215479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 11534917 - 11534881
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11534917 aaaagtcttgattgaatacctaaagacttttttaaaa 11534881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 28844567 - 28844511
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  28844567 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 28844511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 33135635 - 33135579
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||| |||||||| ||||  |||| |||||||||||||||    
T  33135635 agtcttgattgaataccacaatactttttttaaattgcaaaaagtcttgattgaata 33135579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 34028935 - 34028971
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34028935 aaaagtcttgattgaatacctaaagacttttttaaaa 34028971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 19145082 - 19145021
Alignment:
Q  165 aaagtcttgattgaatacctcaagacttttttaaaatgacaaagag---tcttgattgaata 223  Q
    ||||||||||||||||||| |||| ||||||| |||||| ||||||   |||||||||||||    
T  19145082 aaagtcttgattgaataccacaagtctttttttaaatgataaagagtactcttgattgaata 19145021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 5093247 - 5093301
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  5093247 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 5093301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 12407390 - 12407336
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||||||||   ||||| |||||||||||||    
T  12407390 tcttgattgaataacacaagacttttttaaaattgaaaagaatcttgattgaata 12407336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 16269701 - 16269647
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  16269701 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 16269647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 20605162 - 20605108
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  20605162 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 20605108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 20605246 - 20605192
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  20605246 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 20605192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 31170824 - 31170878
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  31170824 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 31170878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 3574859 - 3574803
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||| |||||||| || |  |||| |||||||||||||||    
T  3574859 agtcttgattgaataccacaaaactttttttaagttgcaaaaagtcttgattgaata 3574803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 7026577 - 7026545
Alignment:
Q  164 aaaagtcttgattgaatacctcaagactttttt 196  Q
    |||||||||||||||||||| ||||||||||||    
T  7026577 aaaagtcttgattgaataccacaagactttttt 7026545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 14198779 - 14198830
Alignment:
Q  171 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| | |||||||||||| |||| | |||||||||||||||||||    
T  14198779 ttgattgaataacacaagactttttt-aaattagaaagagtcttgattgaata 14198830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 20157759 - 20157795
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  20157759 aaaagtcttgattgaatacctaaagacttctttaaaa 20157795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 24193631 - 24193595
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  24193631 aaaaatcttgattgaataccccaagacttttttaaaa 24193595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 28740481 - 28740537
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| ||| |||||||||||    
T  28740481 agtcttgattgaataccacaagactttttttaagttgcaaaaagttttgattgaata 28740537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 32125258 - 32125206
Alignment:
Q  171 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  32125258 ttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 32125206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 100)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 509845 - 509647
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  509845 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaatcccactacaaaatccatcaaaatccaatttattaaacaatcgttcgaaattt 509746  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  509745 gaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaatagtcttgattgaata 509647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 44121919 - 44122109
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgatt 132  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  44121919 aaatctcatcttttcattaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgatt 44122018  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||        || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44122019 ttgaataccacaagattttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 44122109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 23101497 - 23101289
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  23101497 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 23101398  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23101397 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 23101298  T
Q  215 gattgaata 223  Q
    |||||||||    
T  23101297 gattgaata 23101289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 28342546 - 28342338
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  28342546 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 28342447  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28342446 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtctcgattgaatacctcaagacttttttaaaatgacaaagagtctt 28342347  T
Q  215 gattgaata 223  Q
    |||||||||    
T  28342346 gattgaata 28342338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 29614765 - 29614973
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  29614765 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 29614864  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614865 ttcgaaatttgaatgattttgaatatcacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 29614964  T
Q  215 gattgaata 223  Q
    |||||||||    
T  29614965 gattgaata 29614973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 39784298 - 39784090
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  39784298 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 39784199  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784198 ttcgaaatttaaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 39784099  T
Q  215 gattgaata 223  Q
    |||||||||    
T  39784098 gattgaata 39784090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 40460718 - 40460916
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||| |||||||||||||  ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  40460718 atctcaagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcattcgaaattt 40460817  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  40460818 gaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagagtcttaattgaata 40460916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 28 - 223
Target Start/End: Original strand, 33892264 - 33892459
Alignment:
Q  28 ttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaa 127  Q
    |||| |||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |   ||||||||||||||| ||||||| |||||||||||||    
T  33892264 ttaaaaaatctcatcttttaatgaaagactttttcttgttaaaattacactacaaaattcataaaaatccaatttatttaacaatcattcgaaatttgaa 33892363  T
Q  128 tgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33892364 tgattttgaataccacaagactttgtttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtgttgattgaata 33892459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 37328108 - 37327918
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgatt 132  Q
    |||||| ||||||||||||||||| |||| || ||||||||| ||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||    
T  37328108 aaatcttatcttttcatgaaagacttttttttgttaaaattatactacaaaatccatcaaaattcaatttattaaacaatcctttgaaatttgaatgatt 37328009  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||       || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37328008 ttgaataccacaagactttttttaagtaatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 37327918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 46405442 - 46405640
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||| || ||| || ||||||| |||||||||||| |||||||||  |||||||||||||||||||||||| || |||||||    
T  46405442 atctcaagaaatctcatctttttattaaatactttttcttgttaaaattacaccacaaaatccatcaaaatccaatttattaaacaatcatttgaaattt 46405541  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46405542 gaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaacgacaaagagtcttgattgaata 46405640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 3023125 - 3022917
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  3023125 atctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 3023026  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  3023025 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaaaagtctt 3022926  T
Q  215 gattgaata 223  Q
    |||||||||    
T  3022925 gattgaata 3022917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 9882238 - 9882445
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| |||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||          |||||||||||||||     
T  9882238 atctcaagaaatctcatttttt-atgaaagactttttcttcttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatca 9882336  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9882337 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 9882436  T
Q  215 gattgaata 223  Q
    |||||||||    
T  9882437 gattgaata 9882445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 18838588 - 18838380
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||          |||||||||||||||     
T  18838588 atctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatct 18838489  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       ||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18838488 ttcgaaatttgaatgattttgaataccacaagactttttttaagcgatgaaaagtcttgattgaatacctcaagacttttttaaaattacaaagagtctt 18838389  T
Q  215 gattgaata 223  Q
    |||||||||    
T  18838388 gattgaata 18838380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 29585703 - 29585506
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||||  |||||||||| ||||||||||||||||| ||||||    
T  29585703 atctcaagaaatttcatctttttatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaaattattaaacaatccttcaaaattt 29585604  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||| |||||       || |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29585603 gaatgattttgaataccagaagactttttttaagtgat-aaaagttttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattgaata 29585506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 7993341 - 7993133
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||          ||||||||||||||||    
T  7993341 atctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacacaatccatcaaaattcaatttattaaacaatcc 7993242  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||||||||||||||||||||| |||||       || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  7993241 ttcgaaatttgaatgattttgaataccataagactttttttaagtgatgaaaagttttgattgaatacctcaagacttttttaaaatggcaaagagtctt 7993142  T
Q  215 gattgaata 223  Q
    |||||||||    
T  7993141 gattgaata 7993133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 28034806 - 28035014
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  28034806 atctcaagaaatctcatcttttcatgaaagacttttttttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 28034905  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    || ||||||||||| |||||||||||||||||||       || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  28034906 tttgaaatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaaaagtctt 28035005  T
Q  215 gattgaata 223  Q
    |||||||||    
T  28035006 gattgaata 28035014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 33382828 - 33382628
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaat 122  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||    
T  33382828 aaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 33382729  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    || |||||||||||||||||  ||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33382728 ttaaatgattttgaataccatgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 33382629  T
Q  223 a 223  Q
    |    
T  33382628 a 33382628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 8675532 - 8675326
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| |||||||||||||||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  8675532 atctcaagaaatctcatcttttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 8675433  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||| ||| |||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8675432 ttcgaagtttaaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtttt 8675333  T
Q  215 gattgaa 221  Q
    |||||||    
T  8675332 gattgaa 8675326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 39028286 - 39028088
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||   ||||||||||| || ||||||| ||||| ||||||||||||||||  |||||||||||||||||||||||| |||| |||||    
T  39028286 atctcaagaaatctctgtttttcatgaaaaactttttcttgttaaagttacactacaaaatccatcaaaatccaatttattaaacaatctttcgtaattt 39028187  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||| ||||||||||| ||||||||       || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39028186 gaacgattttgaataacacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagagtcttgattgaata 39028088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 19251723 - 19251530
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 129  Q
    ||||||| |||  |||||||||||||| |||| ||  ||||||| ||| | |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  19251723 aagaaatttcaggttttcatgaaagactttttattgctaaaatttcacaagaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 19251624  T
Q  130 attttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||| ||||       || ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19251623 attttgaataccacgagactttttttaagtgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 19251530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 12740571 - 12740364
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca---------atttattaaacaatcct 115  Q
    |||||||||||||||||||||| ||||||||| || |||| |||||||||||||| |||||||||||||||| |         |||||||||||||||||    
T  12740571 atcttaagaaatctcatctttttatgaaagactttctcttgttaaaattacactataaaatcccacaaaatctatcaaaatccatttattaaacaatcct 12740472  T
Q  116 tcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttg 215  Q
    | |||||||||||||||||||||||||| ||||       |||||||||||| |||||||| |||||||||||||||||| ||||||||||||| |||||    
T  12740471 ttgaaatttgaatgattttgaataccacgagactttttttaaatgatgaaaaatcttgattaaatacctcaagactttttaaaaatgacaaagaatcttg 12740372  T
Q  216 attgaata 223  Q
    ||||||||    
T  12740371 attgaata 12740364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 3797072 - 3797266
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatccca-caaaatccaatttattaaacaatccttcgaaatttgaa 127  Q
    |||||||||| || ||||| | |||||| ||||| |  ||||||| ||||| ||||||||| ||||||| |||||||||||||||||||| |||||| ||    
T  3797072 taagaaatct-atgttttcttaaaagactttttcatgctaaaatttcactagaaaatcccatcaaaatctaatttattaaacaatccttcaaaattttaa 3797170  T
Q  128 tgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||| ||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3797171 tgatcttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 3797266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 17001049 - 17001232
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 129  Q
    |||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||    
T  17001049 aagaaatctcatattttcatgaaagactttttcttgttataattacactacaaaatcc----------aatttattaaacaatccttcgaaatttgaatg 17001138  T
Q  130 attttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||| | |        || |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17001139 attttgaataccacgatattttttttaagtgatgaaaagtctttattgaatacctcaagactttttaaaaatgacaaagagtcttgattgaata 17001232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 9180065 - 9179871
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaat 128  Q
    ||||||||||||| |||||||||||||| ||||  |  ||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||||| | |    
T  9180065 taagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatcccacaaaatccaatttattaaacaatccttcggaatttaagt 9179966  T
Q  129 gattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||| ||||||||||||       || ||||||| ||||||||||||||||  ||| |||||||| |||||||||||| |||||||||||||    
T  9179965 gattttgtataccacaagactttttttaagtgatgaagagtcttgattgaatacgacaaaactttttttaaatgacaaagaatcttgattgaata 9179871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 58 - 223
Target Start/End: Complemental strand, 32883948 - 32883773
Alignment:
Q  58 ttttcttattaaaattacactacaaaatcccac----------aaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaaga 147  Q
    ||||||| |||||||||||||||||||||||||          ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  32883948 ttttcttgttaaaattacactacaaaatcccacgaaatccatcaaaatccaatttaataaacaatcattcgaaatttgaatgattttgaataccacaaga 32883849  T
Q  148 cnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |       || |||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  32883848 ctttttttaagtgatgaaaagtcttaattgaatacttcaagacttttttaaaatgacaaaaagtcttgattgaata 32883773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 47066878 - 47066694
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 129  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||          ||||||||||||||||||||||||||||||||    
T  47066878 aagaaatctcatcttttcatgaaatattttttcttgttaaaattacactacaaaatcc----------aatttattaaacaatccttcgaaatttgaatg 47066789  T
Q  130 attttgaataccacaagac-nnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||        || ||||||||  | |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  47066788 attttgaataccacaagacttttttttaagtgatgaaattttttgattgaatacgtcaagacttttttaaaatgacaaagagttttgattgaata 47066694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 973386 - 973182
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| |||||||  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  973386 taagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 973287  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| | |        || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  973286 aaatttgaatgattttgaataccactaaattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 973187  T
Q  219 gaata 223  Q
    |||||    
T  973186 gaata 973182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 30440998 - 30440794
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||| ||||||| ||||| || ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  30440998 taagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 30440899  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||| |||||| |||||||||||| ||||||||    
T  30440898 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagattttttttaaatgacaaagaatcttgatt 30440799  T
Q  219 gaata 223  Q
    |||||    
T  30440798 gaata 30440794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 43581095 - 43581299
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  43581095 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 43581194  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||  |||||||||||| |||||||||||| ||||||||    
T  43581195 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaagactttttttaaatgacaaagaatcttgatt 43581294  T
Q  219 gaata 223  Q
    |||||    
T  43581295 gaata 43581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 47914472 - 47914264
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||    
T  47914472 atcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatcc 47914373  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||| ||| ||||       || |||| || ||||||||||||||||| || ||||||||| |||||||||||| ||||    
T  47914372 ttcgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacaaagaatctt 47914273  T
Q  215 gattgaata 223  Q
    |||||||||    
T  47914272 gattgaata 47914264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 12963836 - 12963692
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||       || | ||||||| ||||||||||    
T  12963836 acaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattttggataccacgagactttttttaagtaatgaaaaatcttgattga 12963737  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  12963736 atatctcaagacttttttaaaatgacaaagagtcttgattgaata 12963692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 40996654 - 40996858
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||| ||||||||||          ||||||||||||||||||||    
T  40996654 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatctgatttattaaacaatccttcg 40996753  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       ||  ||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  40996754 aaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 40996853  T
Q  219 gaata 223  Q
    |||||    
T  40996854 gaata 40996858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 44256775 - 44256975
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaat----------ccaatttattaaacaatccttcgaaat 122  Q
    ||||||||| |||| |||||| || ||||||| ||||||||||||| |||||||| |||||||          |||||||||||||||||| ||||||||    
T  44256775 aaatctcatattttgatgaaaaactttttcttgttaaaattacactgcaaaatccaacaaaattcatccaaatccaatttattaaacaatcattcgaaat 44256874  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||||||||||||||||| | ||       || |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| |||    
T  44256875 ttgaatgattttgaataccacgatactttttttaagtgatgaaaagtcttgattgaataccttaagatttttttaaaatgacaaaaagtcttgattaaat 44256974  T
Q  223 a 223  Q
    |    
T  44256975 a 44256975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 10068658 - 10068457
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaat 122  Q
    ||||||||| |||| |||||| || ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||| ||||    
T  10068658 aaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttattaaacaatccttcaaaat 10068559  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctc-aagacttttttaaaatgacaaagagtcttgattgaa 221  Q
    ||||||||||||||||||||||||||       || ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||    
T  10068558 ttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacctcaaagacttttttaaaatggcaaagagtcttgattaaa 10068459  T
Q  222 ta 223  Q
    ||    
T  10068458 ta 10068457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 41827503 - 41827305
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaa----------tccaatttattaaacaatcc 114  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||          ||||||||||||||||||||    
T  41827503 atctcaagaaatctcatattttcatgaaagacattttcttgttaaaattacactacacaatcccacaaaatccatcaaaatccaatttattaaacaatcc 41827404  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||| |          |||||||||||||||||||       || | ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  41827403 ttcaa----------attttgaataccacaagactttttttaagttatgaaaagtcttgattgaacacctcaagatttttttaaaatgacaaaaagtctt 41827314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 44623295 - 44623485
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgatt 132  Q
    |||| |||| |||| |||| |||| ||||| |  ||||||| ||||| ||||| ||||||||| |||||||||||||| || || ||||| |||||||||    
T  44623295 aaatatcatatttttatgagagactttttcattctaaaatttcactagaaaattccacaaaattcaatttattaaacagtctttagaaatatgaatgatt 44623394  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||| ||| ||||       || ||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||    
T  44623395 ttgaatatcacgagacctttttaaagtgatgaagagtcttgattaaataccacaagactttttttaaatgacaaagagtcttgattgaata 44623485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 7719265 - 7719469
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||| ||||    
T  7719265 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcg 7719364  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| |||        || |||| || ||||||||||||||||| |||||||||||| |||||||||| | | ||||||    
T  7719365 aaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaataatattgatt 7719464  T
Q  219 gaata 223  Q
    |||||    
T  7719465 gaata 7719469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 12893610 - 12893406
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| |||||| |||||||||||          |||||||||||||| |||||    
T  12893610 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaattcttcg 12893511  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||  ||||       || |||| || |||||||||| |||||| |||||||||||| |||||||||||| ||||||||    
T  12893510 aaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattaaataccacaagactttttttaaatgacaaagaatcttgatt 12893411  T
Q  219 gaata 223  Q
    |||||    
T  12893410 gaata 12893406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 18914740 - 18914944
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||| |||| |    
T  18914740 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaaacctttg 18914839  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| ||| |||||||| | ||||||    
T  18914840 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaaggacaaagaattttgatt 18914939  T
Q  219 gaata 223  Q
    |||||    
T  18914940 gaata 18914944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 20275268 - 20275472
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||||||||||||  |||||||| |||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  20275268 taagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 20275367  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||||||||||||||||||||| |||||       || |||| || |||||||||||||||||  ||||||||||| ||||||||| || ||||||||    
T  20275368 aaatttgaatgattttgaataccataagactttttttaagtgattaagagtcttgattgaataccataagactttttttaaatgacaaggaatcttgatt 20275467  T
Q  219 gaata 223  Q
    |||||    
T  20275468 gaata 20275472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 34695475 - 34695271
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  34695475 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 34695376  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||| |||||||||||||  |||       || |||| || ||||||||||||||||| ||| |||||||| ||||||||| || ||||||||    
T  34695375 aaatttgaatggttttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaaaactttttttaaatgacaaggaatcttgatt 34695276  T
Q  219 gaata 223  Q
    |||||    
T  34695275 gaata 34695271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 44343401 - 44343605
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| ||||| |||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  44343401 taagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 44343500  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||||||||||||| |||||||| | ||       || |||| || ||||||||||||||| | |||||||||||| |||||||||||| ||||||||    
T  44343501 aaatttgaatgattttaaataccactaaactttttttaagtgattaagagtcttgattgaatatcacaagactttttttaaatgacaaagaatcttgatt 44343600  T
Q  219 gaata 223  Q
    |||||    
T  44343601 gaata 44343605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 47879374 - 47879166
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||| ||||||||||||          ||||||||||||||||    
T  47879374 atcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcc 47879275  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||  ||||||||||||||||||||| ||| ||||       || |||| || ||||||||||||||||| || ||||||||| |||||||||||| ||||    
T  47879274 ttttaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacaaagaatctt 47879175  T
Q  215 gattgaata 223  Q
    |||||||||    
T  47879174 gattgaata 47879166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 7718367 - 7718549
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||  ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  7718367 taagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 7718466  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaat 201  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| ||||    
T  7718467 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaat 7718549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 10676498 - 10676629
Alignment:
Q  92 aaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagact 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||       || ||||||||||||||||||||||||| ||||||     
T  10676498 aaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacaatgagactttttttaagtgatgaaaagtcttgattgaataccacaagacc 10676597  T
Q  192 tttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| ||||  ||||||||||||||| ||||    
T  10676598 ttttttaaattgcaaagagtcttgattaaata 10676629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 19810988 - 19810874
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||| |||||||||||||||||||  |  ||||||| ||||| ||||| ||||||||||||||||||||||||||| || |||||||    
T  19810988 atctcaagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatccaatttattaaacaatcatttgaaattt 19810889  T
Q  125 gaatgattttgaata 139  Q
    |||||||||||||||    
T  19810888 gaatgattttgaata 19810874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 727691 - 727510
Alignment:
Q  43 ttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacca 142  Q
    |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| |    
T  727691 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatacta 727592  T
Q  143 caaga-cnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    | |||         || |||| || ||| ||||||||||| | |||||||||||| |||||||||||| | |||||||||||    
T  727591 ctagatttttttttaagtgataaagagttttgattgaatatcacaagactttttttaaatgacaaagaattttgattgaata 727510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 34009155 - 34009010
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac-aagacnnnnnnnaaatgatgaaaagtcttgattg 177  Q
    |||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||||||||| | |||       || |||| || ||| |||||||    
T  34009155 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaggactttttttaagtgattaagagtgttgattg 34009056  T
Q  178 aatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||| |||||||||||| |||||||||| | |||||||||||||    
T  34009055 aataccacaagactttttttaaatgacaaataatcttgattgaata 34009010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 29893177 - 29893072
Alignment:
Q  118 gaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgat 217  Q
    ||||||||||| ||||| ||||| |||||||       || |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  29893177 gaaatttgaattattttaaatactacaagactttttttaagtgatgaaaagtcttgattgaatacctcatgactgttttaaaatgacaaagagtcttgat 29893078  T
Q  218 tgaata 223  Q
    ||||||    
T  29893077 tgaata 29893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 76 - 223
Target Start/End: Complemental strand, 31639020 - 31638873
Alignment:
Q  76 actacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgat 175  Q
    |||| |||||||  |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||       || |||| || |||||||||    
T  31639020 actagaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgat 31638921  T
Q  176 tgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
     ||||||| ||  | |||||| |||||||||||| | |||||||||||    
T  31638920 agaataccacacaagtttttttaaatgacaaagaattttgattgaata 31638873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 79 - 222
Target Start/End: Complemental strand, 25805827 - 25805684
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  || ||| ||||||||||||||||||| |||||||||||||||||||||||||||||          || ||||||||| | ||||||||    
T  25805827 acaaaatccatcataattcaatttattaaacaatcctacgaaatttgaatgattttgaataccacaaatttttttttaagtgatgaaaaattttgattga 25805728  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||| | ||| |||||| |||| ||||||| ||||||||||||    
T  25805727 ataccactagattttttttaaattacaaagaatcttgattgaat 25805684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 32142918 - 32143046
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||| ||| ||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||    
T  32142918 atcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 32143017  T
Q  115 ttcgaaatttgaatgattttgaataccac 143  Q
    ||| |||||||||||||||||||||||||    
T  32143018 ttcaaaatttgaatgattttgaataccac 32143046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 37972868 - 37972981
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacacta----------caaaatcccacaaaatccaatttattaaacaatcc 114  Q
    |||| ||||| ||||||||||||||||||||| ||||||| ||||||||||||||          ||||||||  ||||||||||||||||||| |||||    
T  37972868 atctcaagaagtctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccgcaaaatccatcaaaatccaatttattaaataatcc 37972967  T
Q  115 ttcgaaatttgaat 128  Q
    ||||||||||||||    
T  37972968 ttcgaaatttgaat 37972981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 39219382 - 39219586
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||| ||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          |||||||||||||| | ||     
T  39219382 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat-catca 39219480  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagac-ttttttaaaatgacaaagagtcttgat 217  Q
    ||||||||||||||||||||||||  ||||       || |||| || ||||||||||||||| | |||||| |||||| ||||   |||||||||||||    
T  39219481 aaatttgaatgattttgaataccaatagactttttttaagtgattaagagtcttgattgaataacacaagacttttttttaaattggaaagagtcttgat 39219580  T
Q  218 tgaata 223  Q
    ||||||    
T  39219581 tgaata 39219586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 43187366 - 43187485
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatccttcgaaat 122  Q
    ||||||||| | |||||||||||| ||||||| |||||||| ||||| ||||||| |||||          ||||||||||||||||||| |||| ||||    
T  43187366 aaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaattcatcaaaatccaatttattaaacaatgcttcaaaat 43187465  T
Q  123 ttgaatgattttgaatacca 142  Q
    ||||||||||||||||||||    
T  43187466 ttgaatgattttgaatacca 43187485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 43679556 - 43679492
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 143  Q
    |||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  43679556 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccac 43679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 48117746 - 48117802
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  48117746 agtcttgattgaatacctcaagacttttcaaaaatgacaaagagtcttgattgaata 48117802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 1470309 - 1470441
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaaga 189  Q
    ||||||| |||| |||||||||| |||  ||||||||| ||||||||||||||||| ||       |||||||||||||| |  |||||||| | |||||    
T  1470309 caaaatctaattcattaaacaatgctttaaaatttgaacgattttgaataccacaatactttttt-aaatgatgaaaagtttatattgaatatcacaaga 1470407  T
Q  190 cttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||| |||||||||| |||||| ||||||||    
T  1470408 ctttttttaaatgacaaatagtcttaattgaata 1470441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 447907 - 447852
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaa 145  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  447907 caaaatccaattaattaaacaatcattcgaaatttgaatgattttaaataccacaa 447852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 7113583 - 7113530
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 143  Q
    |||||||  ||||||||||||||||| |||||||||||| ||||||||||||||    
T  7113583 caaaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccac 7113530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 19251544 - 19251488
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  ||||||||||||||||||||    
T  19251544 agtcttgattgaataccacaagactttttttaagttgcaaagagtcttgattgaata 19251488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29614959 - 29615015
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  29614959 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 29615015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 34695243 - 34695187
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||   |||||||||||||||||||    
T  34695243 agtcttgattgaataccacaagactttttttaaattggaaagagtcttgattgaata 34695187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 39784104 - 39784048
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  39784104 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 39784048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 8078450 - 8078393
Alignment:
Q  167 agtcttgattgaatacctcaagact-tttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||||| | ||||| |||||||||||| |||||||||||||    
T  8078450 agtcttgattgaataccacaagattcttttttaaatgacaaagaatcttgattgaata 8078393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 12963706 - 12963653
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattga 220  Q
    ||||||||||||||||| |||||||||||| || |  |||||||||||||||||    
T  12963706 agtcttgattgaataccacaagactttttttaagttgcaaagagtcttgattga 12963653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 43187545 - 43187594
Alignment:
Q  174 attgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||  ||||||||||| |||| |||||||||||||||||||||    
T  43187545 attgaataccataagactttttttaaattacaaagagtcttgattgaata 43187594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 9882431 - 9882487
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||| |||||||| ||||  |||| |||||||||||||||    
T  9882431 agtcttgattgaataccacaaaactttttttaaattgcaaaaagtcttgattgaata 9882487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 10068471 - 10068415
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||| |||||| |||||||||||| ||||  |||||||| |||||||||||    
T  10068471 agtcttgattaaataccacaagactttttttaaattgcaaagagttttgattgaata 10068415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 10617003 - 10616955
Alignment:
Q  159 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 207  Q
    ||||| ||| ||||||| ||||||||||||||||||| |||||||||||    
T  10617003 tgatggaaaatcttgatcgaatacctcaagactttttaaaaatgacaaa 10616955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 17001218 - 17001274
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  17001218 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 17001274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 18914934 - 18914986
Alignment:
Q  171 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| | |||||||||||||||||   |||||||||||||||||||    
T  18914934 ttgattgaataacacaagacttttttaaaattggaaagagtcttgattgaata 18914986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 23101303 - 23101247
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| | |||||||||||||    
T  23101303 agtcttgattgaataccacaagactttttttaaattgcaaaaattcttgattgaata 23101247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 28342352 - 28342296
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| | |||||||||||||    
T  28342352 agtcttgattgaataccacaagactttttttaaattgcaaaaaatcttgattgaata 28342296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 37327932 - 37327876
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  37327932 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 37327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 40097176 - 40097140
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  40097176 aaaagtcttgattgaatacctaaagacttttttaaaa 40097140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 48117788 - 48117844
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  48117788 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 48117844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 7113479 - 7113412
Alignment:
Q  156 aaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||| |||| |||| |||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  7113479 aaatgataaaaaatcttaattgaataacacaagactttttttaaattggaaagagtcttgattgaata 7113412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 41827322 - 41827263
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||| |||||||||||| || |  |||| | |||||||||||||    
T  41827322 aaaagtcttgattgaataccacaagactttttttaagttgcaaaaattcttgattgaata 41827263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 12893418 - 12893364
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  12893418 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 12893364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 28034997 - 28035031
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaa 198  Q
    |||||||||||||||||||| ||||||||||||||    
T  28034997 aaaagtcttgattgaataccacaagacttttttaa 28035031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 30440806 - 30440752
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  30440806 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 30440752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 34009022 - 34008968
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  34009022 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 34008968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 34695283 - 34695229
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  34695283 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 34695229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 43581287 - 43581341
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  43581287 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 43581341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 44343593 - 44343647
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  44343593 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 44343647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 47879178 - 47879124
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||||||||   ||||||| |||||||||||    
T  47879178 tcttgattgaataacacaagacttttttaaaattgaaaagagtattgattgaata 47879124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 47914276 - 47914222
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||||||||   ||||||| |||||||||||    
T  47914276 tcttgattgaataacacaagacttttttaaaattgaaaagagtattgattgaata 47914222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 28762655 - 28762618
Alignment:
Q  86 cccacaaaatccaatttattaaacaatccttcgaaatt 123  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  28762655 cccacaaaatacaatttattaaacaatccttcaaaatt 28762618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 28854104 - 28854141
Alignment:
Q  86 cccacaaaatccaatttattaaacaatccttcgaaatt 123  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  28854104 cccacaaaatacaatttattaaacaatccttcaaaatt 28854141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 32143121 - 32143170
Alignment:
Q  174 attgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||| | |||||||||||| |||| | |||||||||||||||||||    
T  32143121 attgaataacacaagactttttttaaattagaaagagtcttgattgaata 32143170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 727520 - 727468
Alignment:
Q  171 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  727520 ttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 727468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 3022934 - 3022902
Alignment:
Q  164 aaaagtcttgattgaatacctcaagactttttt 196  Q
    |||||||||||||||||||| ||||||||||||    
T  3022934 aaaagtcttgattgaataccacaagactttttt 3022902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 3797252 - 3797308
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| |  | ||||||||| ||||  ||||||||||||||||||||    
T  3797252 agtcttgattgaatatcagatgactttttttaaattgcaaagagtcttgattgaata 3797308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 7993147 - 7993091
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| | |||||||||| || |  |||| |||||||||||||||    
T  7993147 agtcttgattgaataccacgagactttttttaagttgcaaaaagtcttgattgaata 7993091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 31638883 - 31638831
Alignment:
Q  171 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  31638883 ttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 31638831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 33382642 - 33382586
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||| ||||||| || |  |||| |||||||||||||||    
T  33382642 agtcttgattgaataccacaaggctttttttaagttgcaaaaagtcttgattgaata 33382586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 39028102 - 39028046
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||||| |||||| || |  |||| |||||||||||||||    
T  39028102 agtcttgattgaataccacaagattttttttaagttgcaaaaagtcttgattgaata 39028046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 39301247 - 39301283
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  39301247 aaaagtcttgattaaatacctaaagacttttttaaaa 39301283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 46405626 - 46405682
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||||| |||||| || |  |||| |||||||||||||||    
T  46405626 agtcttgattgaataccgcaagattttttttaagttgcaaaaagtcttgattgaata 46405682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 23987408 - 23987210
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  23987408 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatctaatttattaaacaatccttcgaaattt 23987309  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23987308 gaatgattttgaataccacaagactttttttaagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtattgattgaata 23987210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 5441608 - 5441400
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  5441608 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 5441509  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441508 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 5441409  T
Q  215 gattgaata 223  Q
    |||||||||    
T  5441408 gattgaata 5441400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 27768260 - 27768052
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  27768260 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 27768161  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768160 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 27768061  T
Q  215 gattgaata 223  Q
    |||||||||    
T  27768060 gattgaata 27768052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 54341348 - 54341140
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  54341348 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 54341249  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54341248 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 54341149  T
Q  215 gattgaata 223  Q
    |||||||||    
T  54341148 gattgaata 54341140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 30967311 - 30967509
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||| || |||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30967311 atctcaagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatcctttgaaattt 30967410  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30967411 gaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaata 30967509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 32322295 - 32322087
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  32322295 atctcaagaaatctcatctttttatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatcc 32322196  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32322195 ttcgaaatttgaatgattttgaataccacaagactatttttaagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 32322096  T
Q  215 gattgaata 223  Q
    |||| ||||    
T  32322095 gattaaata 32322087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 37828404 - 37828612
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||          |||||||||||||||||||||    
T  37828404 atctcaagaaatctcatcttttcatgaaagactttttctttttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 37828503  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  37828504 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagactttttaaaaatgacaaagagtctt 37828603  T
Q  215 gattgaata 223  Q
    |||||||||    
T  37828604 gattgaata 37828612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 49501521 - 49501721
Alignment:
Q  25 atcttaagaaatctcatcttttcat--gaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaat 122  Q
    |||| ||||||||||||||||| ||  ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  49501521 atctcaagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccaatttattaaacaatcattcgaaat 49501620  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    |||||||||||||||| |||||||||       || ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  49501621 ttgaatgattttgaatgccacaagacattttttaagtgatgaaaagtcttgattgaatacctcaagatttatttaaaatgacaaagagtcttgattgaat 49501720  T
Q  223 a 223  Q
    |    
T  49501721 a 49501721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 49507586 - 49507786
Alignment:
Q  25 atcttaagaaatctcatcttttcat--gaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaat 122  Q
    |||| ||||||||||||||||| ||  ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  49507586 atctcaagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccaatttattaaacaatcattcgaaat 49507685  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    |||||||||||||||| |||||||||       || ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  49507686 ttgaatgattttgaatgccacaagacattttttaagtgatgaaaagtcttgattgaatacctcaagatttatttaaaatgacaaagagtcttgattgaat 49507785  T
Q  223 a 223  Q
    |    
T  49507786 a 49507786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 50018437 - 50018247
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgatt 132  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||   ||||| ||||||||||||||||||||| |||||||||||||     
T  50018437 aaatctcatcttttcttgaaagactttttcttgttaaaattacactacaaaatccattaaaattcaatttattaaacaatccttcaaaatttgaatgatc 50018338  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||       |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50018337 ttgaataccacaagactttttttaaatgaagaaaagtcttgatggaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 50018247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 51321125 - 51320917
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacacta----------caaaatcccacaaaatccaatttattaaacaatcc 114  Q
    |||| |||||||||||||||||||||||| || ||||||| ||||||||||||||          ||||||||  |||||||||||||||||||||||||    
T  51321125 atctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactataaaattacacaaaatccatcaaaatccaatttattaaacaatcc 51321026  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51321025 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 51320926  T
Q  215 gattgaata 223  Q
    |||||||||    
T  51320925 gattgaata 51320917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 12913413 - 12913220
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 129  Q
    |||||||||||| | ||||||||| || ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12913413 aagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatcccacaaaatccaatttattaaacaatccttcaaaatttgaatg 12913314  T
Q  130 attttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||  ||||       ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  12913313 attttgaataccatgagactttttttaaatgatgaaaaagcttgattgaatacctcaagacttttttaaaatgacaaagagtcttaattaaata 12913220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 54853470 - 54853678
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  54853470 atctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 54853569  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    || ||||||||||| |||||||||||||||||||       || |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  54853570 tttgaaatttgaataattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacttcaagacttttttaaaatgaaaaagagtctt 54853669  T
Q  215 gattgaata 223  Q
    |||||||||    
T  54853670 gattgaata 54853678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 28484092 - 28483923
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  28484092 atcttaagaaatctcgtcttttcatgaaagactttttcttgttaaa-ttacactacaaaatcctacaaaatccaatttattaaataatccttcgaaattt 28483994  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttt 195  Q
    ||||||||||||||||||| ||||       || |||||||||||||||||||||||||||||||||||||    
T  28483993 gaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttt 28483923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 37916023 - 37915823
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaat 122  Q
    |||||| ||||||||||||| ||| ||||||| |||||| ||||||||||||||||||||||||||          ||||||||||||||||||||||||    
T  37916023 aaatcttatcttttcatgaatgactttttcttgttaaaagtacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 37915924  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  37915923 ttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgatagagagtcttgattgaat 37915824  T
Q  223 a 223  Q
    |    
T  37915823 a 37915823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 49834835 - 49835023
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||| ||||||||| | ||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||    
T  49834835 atctcaagaaatctcatcttttaatgaaagacttcttcttgttaaaattacactacaa----------aatccaatttattaaacaatccttcgaaattt 49834924  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  49834925 gaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagcctttgttaaaatgacaaagagtcttgattgaata 49835023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 32684018 - 32684197
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgatt 132  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||    
T  32684018 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacaa----------aatccaatttattaaacaatccttcgaaatttgaatgatt 32684107  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||       |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  32684108 ttgaataccacaagac-ttttttaaatgatgaaaagtcttgattgaatacctcaatacttttttaaaatgacaaagaatcttaattgaata 32684197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 5800164 - 5799973
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgatt 132  Q
    |||||| |||||||||| |||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  5800164 aaatcttatcttttcattaaagactttttcttgttaaaattactctacaaaatctcacaaaatccaatttattaaacaatcctttgaaatttgaatgatt 5800065  T
Q  133 ttgaataccacaagac-nnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||        || ||||||||||| |||||  ||||| ||||   |||||||||||||||||||||||||||||||||    
T  5800064 ttgaataccacaagacttttttttaagtgatgaaaagttttgatgaaatacatcaaattttttttaaaatgacaaagagtcttgattgaata 5799973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 36479244 - 36479441
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||| ||||||| |||||| |||| ||  ||||||| ||||| |||||||  ||||||||||||||||||| |||||||||||||||    
T  36479244 atctcaagaaatctcatgttttcataaaagacttttttttgctaaaatttcacta-aaaatccatcaaaatccaatttattaaataatccttcgaaattt 36479342  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||| |||||||||||||| ||||       || ||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36479343 gaataattttgaataccacgagactttttttaagtgatgaaaaatcttaattgaatacctcaagacttttttaaaatgacaaagagttttgattgaata 36479441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 29649733 - 29649865
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||    
T  29649733 acaaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 29649832  T
Q  179 atacctcaagacttttttaaaatgacaaagagt 211  Q
    |||||||||||||||||||||||||||||||||    
T  29649833 atacctcaagacttttttaaaatgacaaagagt 29649865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 41725321 - 41725121
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca-----attta--ttaaacaatccttcgaaat 122  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||| ||||||||||||||| ||     ||  |  |||||||||||||| ||||    
T  41725321 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactataaaatcccacaaaattcatcaaaatccaatttaaacaatccttcaaaat 41725222  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||||||||||||| ||||||||       |  ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||    
T  41725221 ttgaatgattttgaatatcacaagactttttttaggtgatgaaaagtcttgattgcatacatcaagacttttttaaaatgacaaagagtattgattgaat 41725122  T
Q  223 a 223  Q
    |    
T  41725121 a 41725121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 55303047 - 55302841
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| |||||||||||| |||||          ||||||||||||||||    
T  55303047 atcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaatatccatcaaaatctgatttattaaacaatcc 55302948  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| || |||||||||||||||||||||| ||||    
T  55302947 ttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgacttttttaaaatgacaaagaatctt 55302848  T
Q  215 gattgaa 221  Q
    |||||||    
T  55302847 gattgaa 55302841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 31314748 - 31314938
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaat 128  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  31314748 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctgatttattaaacaatccttcgaaatttgaat 31314847  T
Q  129 gattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| ||||       || |||| || ||||    ||||||||| |||||||||||| |||||||||||| |||||||| ||||    
T  31314848 gattttgaataccactagactttttttaagtgattaagagtc----ttgaataccacaagactttttttaaatgacaaagaatcttgattaaata 31314938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 46635654 - 46635852
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----atttattaaacaatccttcgaaattt 124  Q
    ||||||||||||| |||| ||||||||| ||||| |  ||||||| ||||| |||||||||||||||| |    ||||||||||||||||||||||||||    
T  46635654 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatcaatcttatttattaaacaatccttcgaaattt 46635753  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||| || | ||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  46635754 gaatgattttgaatactactaaactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaata 46635852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 25331331 - 25331127
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          |||||||||||||||||| |    
T  25331331 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttg 25331232  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||| ||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  25331231 aaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 25331132  T
Q  219 gaata 223  Q
    |||||    
T  25331131 gaata 25331127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 9163216 - 9163072
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||       |  ||||||||| ||||||||||    
T  9163216 acaaaatccatcaaaatttaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagactttttttatgtgatgaaaaatcttgattga 9163117  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||    
T  9163116 ataccacaagactttttttaaatgacaaagagtcttgattgaata 9163072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 44770862 - 44771064
Alignment:
Q  32 gaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatccttcgaaa 121  Q
    |||||||||| |  ||||||||||| ||||||| |||||||| ||||| |||||||||||||          |||||||||||||||||||||||| |||    
T  44770862 gaaatctcatgtcgtcatgaaagactttttcttcttaaaatttcactagaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcaaaa 44770961  T
Q  122 tttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaa-tacctcaagacttttttaaaatgacaaagagtcttgattga 220  Q
    |||||||||||||||||||||  |||        || ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  44770962 tttgaatgattttgaataccatgagattttttttaagtgatgaaaaatcttgattgaattacctcaagatttttttaaaatgacaaagagtcttgattga 44771061  T
Q  221 ata 223  Q
    |||    
T  44771062 ata 44771064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 41881088 - 41881293
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  41881088 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 41881187  T
Q  119 aaatttgaatgattttgaataccacaagac-nnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgat 217  Q
    ||||||||||||||||||||||||| | ||        || |||| || ||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  41881188 aaatttgaatgattttgaataccactaaacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgat 41881287  T
Q  218 tgaata 223  Q
    ||||||    
T  41881288 tgaata 41881293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 1113093 - 1112889
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| | ||||||||  ||||  |||||||||||||||||          ||||||||||||||| || |    
T  1113093 taagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgatttattaaacaatcatttg 1112994  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  1112993 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 1112894  T
Q  219 gaata 223  Q
    |||||    
T  1112893 gaata 1112889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 7007578 - 7007370
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| ||||||||||| | |||||| |  ||||||| ||||| ||||||||||||||| ||          ||||||||||||||||    
T  7007578 atcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatcc 7007479  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| || ||||||||| |||||||| ||| ||||    
T  7007478 ttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacagagaatctt 7007379  T
Q  215 gattgaata 223  Q
    |||||||||    
T  7007378 gattgaata 7007370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 32950838 - 32951046
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||||||||||||  ||||| |  ||||||| ||||| ||||||||||||||| ||          ||||||||||||||||    
T  32950838 atcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatcc 32950937  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| || ||||||||| |||||||||| | ||||    
T  32950938 ttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacaaataatctt 32951037  T
Q  215 gattgaata 223  Q
    |||||||||    
T  32951038 gattgaata 32951046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 40537166 - 40537355
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaat 128  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||| |||||||||  |||||||  ||||||||||||||| |||||||||| |||    
T  40537166 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcaccacaaaatccatcaaaatcagatttattaaacaatcattcgaaatttaaat 40537265  T
Q  129 gattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||           || |||| || ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  40537266 gattttgaataccaca-----ttttttaagtgattaagagttttgattgaataccacaagactttttttaaatgacaaagagtcttgattgaata 40537355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 12113144 - 12112941
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 119  Q
    |||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||| ||||||||||||          |||||||||||||||||||||    
T  12113144 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccattaaaatctgatttattaaacaatccttcga 12113045  T
Q  120 aatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 219  Q
    |||||||||||||||||||||||  ||||       || |||| || ||| ||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  12113044 aatttgaatgattttgaataccattagactttttttaagtgattaagagttttgattgaataccacaagactttttttaaatgacaaagaatcttgattg 12112945  T
Q  220 aata 223  Q
    ||||    
T  12112944 aata 12112941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 22202215 - 22202011
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||||||||| || |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||| || |    
T  22202215 taagaaatctaatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaattttatttattaaacaatcttttg 22202116  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  22202115 aaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 22202016  T
Q  219 gaata 223  Q
    |||||    
T  22202015 gaata 22202011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 19740974 - 19741118
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||       || |||| ||||||||||| |||    
T  19740974 acaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgatttttaataccacaagactttttttaagtgattaaaagtcttgactga 19741073  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| || ||||||||  |||||||||||| |||||||||||||    
T  19741074 ataccacatgactttttataaatgacaaagaatcttgattgaata 19741118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 48261331 - 48261198
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| |||||||||||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  48261331 atctcaagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 48261232  T
Q  115 ttcgaaatttgaatgattttgaataccacaagac 148  Q
    ||| ||||||||||||||||||||||||||||||    
T  48261231 ttcaaaatttgaatgattttgaataccacaagac 48261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 56445357 - 56445474
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||| | || ||||||||| |||||||  |||| || ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  56445357 atctcaagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatcccacaaaatccaatttattaaacaatcattcgaaattt 56445456  T
Q  125 gaatgattttgaatacca 142  Q
    ||||||||||||||||||    
T  56445457 gaatgattttgaatacca 56445474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 28541838 - 28541694
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||    
T  28541838 acaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 28541739  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| | |||||||||| |||||||||||| |||||||||||||    
T  28541738 ataccacgagactttttttaaatgacaaagaatcttgattgaata 28541694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 39479361 - 39479567
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||||||||||||  ||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          |||||||||||||| |||||    
T  39479361 taagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaattcttcg 39479460  T
Q  119 aaatttgaatgattttgaataccacaagac--nnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttga 216  Q
    |||||||||||||||||||||||||||| |         || |||| || ||||||||||||||||| |||||||||||| ||||||||| || ||||||    
T  39479461 aaatttgaatgattttgaataccacaagtctttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaggaatcttga 39479560  T
Q  217 ttgaata 223  Q
    |||||||    
T  39479561 ttgaata 39479567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 1045007 - 1044805
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||||||||| || |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  1045007 taagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 1044908  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||| ||||||| ||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||  ||||||||| || ||||||||    
T  1044907 aaagttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacttttt--aaatgacaaggaatcttgatt 1044810  T
Q  219 gaata 223  Q
    |||||    
T  1044809 gaata 1044805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 3436793 - 3436589
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||||||||| || ||||||||||| || ||||| | |||||||| ||||||||||||||||||||| ||          ||||||||||||||||||||    
T  3436793 taagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaaaattcatcaaaatctgatttattaaacaatccttcg 3436694  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||  |||        ||||||| || ||||||||||||||| | ||||| |||||| ||| |||||| | ||||||||    
T  3436693 aaatttgaatgattttgaataccattagattttttttaaatgattaagagtcttgattgaatatcacaagattttttttaaacgacaaaaaatcttgatt 3436594  T
Q  219 gaata 223  Q
    |||||    
T  3436593 gaata 3436589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 28371053 - 28370920
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaaga 189  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||||||  ||||       || |||| |||||| ||||||||||| |||||||    
T  28371053 caaaattcaatttattaaacaatcctttaaaatttgaatgattttgaataccatgagactttatttaagtgataaaaagttttgattgaatatctcaaga 28370954  T
Q  190 cttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| |||||||||| |||||||||||    
T  28370953 cttttttaaaacgacaaagagttttgattgaata 28370920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 195
Target Start/End: Complemental strand, 42786884 - 42786708
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||  |  ||||||| ||||| ||||| ||||||||||||          ||||||||||||||||||||    
T  42786884 taagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatccttcg 42786785  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttt 195  Q
    ||||||||||||||||||||||||| ||||       ||||||| || ||||||||||||||||| |||||||||||    
T  42786784 aaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagacttttt 42786708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 34228585 - 34228793
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacacta----------caaaatcccacaaaatccaatttattaaacaatcc 114  Q
    ||||||||||||||||| |||||||||||||| ||||| |  ||||||| |||||          ||||||||  |||||||  |||||||||||||||     
T  34228585 atcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatctgatttattaaacaatca 34228684  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||| |||||||||||||||||| ||||       || |||| || | | ||||||||||||| || ||||||||| |||||||||||| ||||    
T  34228685 ttcgaaatttcaatgattttgaataccactagactttttttaagtgattaagaattttgattgaataccacatgactttttttaaatgacaaagaatctt 34228784  T
Q  215 gattgaata 223  Q
    |||||||||    
T  34228785 gattgaata 34228793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 25446190 - 25446047
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||       || |||| || ||||||||||||    
T  25446190 acaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattga 25446091  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| ||||| |||||| |||||||||| | |||||||||||||    
T  25446090 ataccacaagaatttttttaaatgacaaa-aatcttgattgaata 25446047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 37046456 - 37046662
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaatta-cactacaaaatcccacaaaatcca----------atttattaaacaatccttc 117  Q
    ||||||||||||| |||||||||||||| ||||| |  |||||||  ||||| ||||| ||||||||||||          |||||||||||||||||||    
T  37046456 taagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttc 37046555  T
Q  118 gaaatttgaatgattttgaataccacaagac-nnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttga 216  Q
    ||||||||||||||||| |||| ||| ||||        || |||| || ||||||||||||||||| ||| |||||||| |||||||||||| ||||||    
T  37046556 gaaatttgaatgattttaaatatcactagacttttttttaagtgattaagagtcttgattgaataccacaaaactttttttaaatgacaaagaatcttga 37046655  T
Q  217 ttgaata 223  Q
    |||||||    
T  37046656 ttgaata 37046662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 41321014 - 41320881
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||| ||||||||| ||||| || ||||||| ||||| || |||||||||||||||          ||||||||||||||||    
T  41321014 atcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaaaatccatcaaaatctgatttattaaacaatcc 41320915  T
Q  115 ttcgaaatttgaatgattttgaataccacaagac 148  Q
    ||||||||||||||||||||||||||||| ||||    
T  41320914 ttcgaaatttgaatgattttgaataccactagac 41320881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 39307337 - 39307463
Alignment:
Q  97 caatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagactttttt 196  Q
    ||||| |||||| |||| || ||||||||||||||| |||||||||||||||       |||||||||| | ||||||||||||||| ||||||||||||    
T  39307337 caattcattaaataatctttagaaatttgaatgattatgaataccacaagactttttttaaatgatgaagaatcttgattgaataccacaagactttttt 39307436  T
Q  197 aaaatgacaaagagtcttgattgaata 223  Q
    |||||| |||| | |||||||||||||    
T  39307437 aaaatggcaaaaaatcttgattgaata 39307463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 30009679 - 30009887
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||||||||||||| ||||| |  |||||||  |||| ||||||||||||||||||          |||||||||||||||     
T  30009679 atcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatca 30009778  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||  |||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||||| || ||||||||| |||||| ||||| | ||    
T  30009779 tttaaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaggactttttttaaatgataaagaatttt 30009878  T
Q  215 gattgaata 223  Q
    |||| ||||    
T  30009879 gattaaata 30009887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 23465075 - 23464951
Alignment:
Q  99 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaa 198  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||       || |||| || |||||||||||||||   ||| |||||||| |    
T  23465075 atttattaaacaatccttcgaaatttgaatggttttgaataccactagacttattttaagtgattaagagtcttgattgaatattacaaaacttttttta 23464976  T
Q  199 aatgacaaagagtcttgattgaata 223  Q
    |||||||| || |||||||||||||    
T  23464975 aatgacaaggaatcttgattgaata 23464951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 25504705 - 25504849
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||||| |||  |||       || |||| || ||||||||||||    
T  25504705 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactggactttttttaagtgattaagagtcttgattga 25504804  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||| | ||||| |||||| ||||||  |||| |||||||||||||    
T  25504805 atatcacaagaatttttttaaatgatcaagaatcttgattgaata 25504849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 53275979 - 53275835
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||  |||||||| ||||||||||||||||||||||||||| |||| ||| ||||       || |||| |||| ||||||||||    
T  53275979 acaaaatccatcaaaatctgatttattacacaatccttcgaaatttgaatgattttaaatatcactagactttttttaagtgattaaaaatcttgattga 53275880  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||  |||||||||||| |||||||||| | |||| ||||||||    
T  53275879 atactacaagactttttttaaatgacaaataatctttattgaata 53275835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 20021404 - 20021340
Alignment:
Q  159 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  20021404 tgatgaaaagtcttgattgaatacttcaagatttttttaaaatgacaaagaatcttgattgaata 20021340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 7249831 - 7249900
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 148  Q
    |||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7249831 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 7249900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 24131126 - 24131182
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  24131126 agtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaata 24131182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 8712070 - 8711997
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca 98  Q
    |||| |||||||||||| |||| ||||||||| |||||||  ||||||| ||||| ||||||||||||||||||    
T  8712070 atctcaagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcccacaaaatcca 8711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 24736534 - 24736466
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca 98  Q
    |||||||||||| |||||||||||||| | ||||| |||||||| ||||| |||||| |||||||||||    
T  24736534 aagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatctcacaaaatcca 24736466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 37915837 - 37915781
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || ||||||| |||||||||||||||    
T  37915837 agtcttgattgaataccacaagactttttttaagtgacaaaaagtcttgattgaata 37915781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 11090408 - 11090345
Alignment:
Q  160 gatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||||||| ||| |||||||| || || |||||| |||||||||||||    
T  11090408 gatgaaaagtcttgattgaataccacaaaactttttttaagtggcaaagattcttgattgaata 11090345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 37915798 - 37915739
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||| |||||||||||| || | ||||| |||||||||||||||    
T  37915798 aaaagtcttgattgaataccacaagactttttttaagttacaaaaagtcttgattgaata 37915739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 216
Target Start/End: Original strand, 41581794 - 41581991
Alignment:
Q  28 ttaagaaatctcatcttttcatgaaagacatttt-cttattaaaattacactacaaaatcccacaaaat--------ccaatttattaaacaatccttcg 118  Q
    |||||||||||||| ||| ||||||| |  |||| | | |||||||| ||||| |||||||||||||||        |||||||||||||||||  |||     
T  41581794 ttaagaaatctcatgtttacatgaaatatttttttcatgttaaaatttcactagaaaatcccacaaaatatatcaatccaatttattaaacaattattca 41581893  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttga 216  Q
    |||||||||||| | | |||||||| ||||       || | | ||||| |||| | |||||||| |||||||||||||||||||||||  |||||||    
T  41581894 aaatttgaatgactctaaataccacgagactttttttaagttaagaaaattcttaactgaataccacaagacttttttaaaatgacaaaatgtcttga 41581991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 5441414 - 5441358
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  5441414 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 5441358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 11090504 - 11090428
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttatt 105  Q
    ||||||||||||| |||| || |||||| ||||  |  ||||||| ||||| |||||||||||||||||||||||||    
T  11090504 taagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcccacaaaatccaatttatt 11090428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 30967495 - 30967551
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  30967495 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 30967551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 29855728 - 29855677
Alignment:
Q  172 tgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||| | ||||||||||||||||| |||||||||| ||||    
T  29855728 tgattgaatacctcaaaatttttttaaaatgacaaacagtcttgattaaata 29855677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 41881281 - 41881335
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||||||||   |||||||||||||||||||    
T  41881281 tcttgattgaataacacaagacttttttaaaattggaaagagtcttgattgaata 41881335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 27454155 - 27454208
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 143  Q
    |||||||  |||||||||| |||| ||| |||||||||||||||||||||||||    
T  27454155 caaaatctgatttattaaataatctttcaaaatttgaatgattttgaataccac 27454208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 40537307 - 40537397
Alignment:
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||       ||||||  || ||||||||||||||| | |||||||||||| |||| | |||||||||| ||||||||    
T  40537307 ttgaataccacaagactttttttaaatgacaaagagtcttgattgaataacacaagactttttttaaattagaaagagtcttaattgaata 40537397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 27768066 - 27768010
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| | |||||||||||||    
T  27768066 agtcttgattgaataccacaagactttttttaaattgcaaaaaatcttgattgaata 27768010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 40143858 - 40143822
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  40143858 aaaagtcttgattgaatacctaaagacttttttaaaa 40143822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 54341154 - 54341098
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||  ||||||||||| ||||  |||| |||||||||||||||    
T  54341154 agtcttgattgaataccataagactttttttaaattgcaaaaagtcttgattgaata 54341098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 54509796 - 54509760
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  54509796 aaaagtcttgattgaatacctaaagacttttttaaaa 54509760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 54853664 - 54853720
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  54853664 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 54853720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 25504824 - 25504891
Alignment:
Q  156 aaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||| || | ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  25504824 aaatgatcaagaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 25504891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 1044817 - 1044764
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | ||||||||||||||| ||  |||||||||||||||||||    
T  1044817 tcttgattgaataacacaagacttttttaaattg-gaaagagtcttgattgaata 1044764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 19741106 - 19741160
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  19741106 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 19741160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 20021352 - 20021298
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| ||| |||||||| ||||  ||||||||||||||| ||||    
T  20021352 tcttgattgaataccacaaaactttttttaaattgcaaagagtcttgattaaata 20021298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 22202023 - 22201969
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  22202023 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 22201969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 24130987 - 24131057
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacatttt-cttattaaaattacactacaaaatcccacaaaatcca 98  Q
    ||||||||||||| |||||||||||||  |||| | |  ||||||| ||||| ||||||||||||||||||    
T  24130987 taagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccacaaaatcca 24131057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 24131170 - 24131224
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  24131170 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 24131224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 25331139 - 25331085
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  25331139 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 25331085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 28541706 - 28541652
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  28541706 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 28541652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 32951034 - 32951088
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  32951034 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 32951088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 37046650 - 37046704
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  37046650 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 37046704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 39479555 - 39479609
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  39479555 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 39479609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 41320830 - 41320788
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaaga 209  Q
    ||||||||||||||||| |||||||||||| |||||| |||||    
T  41320830 agtcttgattgaataccacaagactttttttaaatgataaaga 41320788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 28100584 - 28100617
Alignment:
Q  164 aaaagtcttgattgaatacctcaagactttttta 197  Q
    |||||||||||||||||||| |||||||||||||    
T  28100584 aaaagtcttgattgaataccacaagactttttta 28100617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 50018222 - 50018189
Alignment:
Q  164 aaaagtcttgattgaatacctcaagactttttta 197  Q
    |||||||||||||||||||| |||||||||||||    
T  50018222 aaaagtcttgattgaataccacaagactttttta 50018189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 7249926 - 7249982
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||| ||||||| |||||  ||||| ||||||| |||| |||||||||||||    
T  7249926 agtcttgatcgaataccacaagatattttttaaatgactaagaatcttgattgaata 7249982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 26336159 - 26336123
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  26336159 aaaagtcttgattgaatacctaaagacatttttaaaa 26336123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 37828598 - 37828654
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||||| |||||| || |  |||| |||||||||||||||    
T  37828598 agtcttgattgaataccacaagattttttttaatttgcaaaaagtcttgattgaata 37828654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 41762061 - 41762017
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaag 208  Q
    ||||||||||||| |||||| ||||||||||||| ||| ||||||    
T  41762061 aaaagtcttgattcaataccacaagacttttttataatcacaaag 41762017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 42786770 - 42786722
Alignment:
Q  175 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||| | |||||||||| ||||||  ||||||||||||||||||    
T  42786770 ttgaataccactagactttttttaaatgattaagagtcttgattgaata 42786722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 47685226 - 47685190
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  47685226 aaaagtcttgattgaatacctaaagatttttttaaaa 47685190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 49835009 - 49835065
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| ||| |||||||||||    
T  49835009 agtcttgattgaataccacaagactttttttaagttgcaaaaagttttgattgaata 49835065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 50018261 - 50018205
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||  ||||||||||| ||||   ||| |||||||||||||||    
T  50018261 agtcttgattgaataccataagactttttttaaattgtaaaaagtcttgattgaata 50018205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 51320931 - 51320875
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||| |||||||| || |  |||| |||||||||||||||    
T  51320931 agtcttgattgaataccacaaaactttttttaagttgcaaaaagtcttgattgaata 51320875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 4e-74; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 29396390 - 29396598
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  29396390 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 29396489  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29396490 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 29396589  T
Q  215 gattgaata 223  Q
    |||||||||    
T  29396590 gattgaata 29396598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 38536101 - 38536299
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||    
T  38536101 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttgaaattt 38536200  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||| |||||||||||||||||||       || | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38536201 gaataattttgaataccacaagacttttgttaagtaatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaata 38536299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 38558319 - 38558517
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||    
T  38558319 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttgaaattt 38558418  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||| |||||||||||||||||||       || | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38558419 gaataattttgaataccacaagacttttgttaagtaatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaata 38558517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 6312772 - 6312564
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  6312772 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 6312673  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312672 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 6312573  T
Q  215 gattgaata 223  Q
     ||||||||    
T  6312572 aattgaata 6312564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 51701770 - 51701570
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaat 122  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||    
T  51701770 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 51701671  T
Q  123 ttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 222  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51701670 ttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaat 51701571  T
Q  223 a 223  Q
    |    
T  51701570 a 51701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 5495117 - 5495306
Alignment:
Q  34 aatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattt 133  Q
    |||||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  5495117 aatctcatcttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaataatcctttgaaatttaaatgattt 5495216  T
Q  134 tgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||| ||||       || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5495217 tgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttaattgaata 5495306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 31 - 223
Target Start/End: Complemental strand, 18798663 - 18798481
Alignment:
Q  31 agaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatga 130  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||    
T  18798663 agaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc----------aatttattaaacaatccttcgaaatttgaatga 18798574  T
Q  131 ttttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18798573 ttttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 18798481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 25612355 - 25612147
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||          ||||||||||||||||    
T  25612355 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 25612256  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    || |||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25612255 tttgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 25612156  T
Q  215 gattgaata 223  Q
    |||||||||    
T  25612155 gattgaata 25612147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 29219474 - 29219278
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||    
T  29219474 atctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcttaattt 29219375  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  29219374 gaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgac--agagtcttgattgaata 29219278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 9322502 - 9322710
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||          ||||||||||||||||    
T  9322502 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcc 9322601  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||| |||||||||||||||||||||||||| |||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9322602 ttctaaatttgaatgattttgaataccacaggactttttttaaatgatgaaaagtcttgatcgaatacctcaagacttttttaaaatgacaaagagtctt 9322701  T
Q  215 gattgaata 223  Q
    |||||||||    
T  9322702 gattgaata 9322710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 15835055 - 15835263
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatccca----------caaaatccaatttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||          |||||||||||||||||||||||||    
T  15835055 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatcc 15835154  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    || | ||||||||||||||||||||||||||||        ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15835155 tttgcaatttgaatgattttgaataccacaagattttttttaaatgatgagaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 15835254  T
Q  215 gattgaata 223  Q
    |||||||||    
T  15835255 gattgaata 15835263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 48177464 - 48177672
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||          ||||||||||||||||||||     
T  48177464 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatca 48177563  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       || ||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||    
T  48177564 ttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaagagtatt 48177663  T
Q  215 gattgaata 223  Q
    |||||||||    
T  48177664 gattgaata 48177672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 31 - 223
Target Start/End: Complemental strand, 46328234 - 46328032
Alignment:
Q  31 agaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaa 120  Q
    |||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||| ||||||||||||||||||    
T  46328234 agaaatcttatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcgaa 46328135  T
Q  121 atttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattga 220  Q
    ||||||||||||||||||||||| ||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46328134 atttgaatgattttgaataccacgagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattga 46328035  T
Q  221 ata 223  Q
    |||    
T  46328034 ata 46328032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 28387395 - 28387603
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||| ||||||||| |||| || ||||||||| |||||||||||||||||||||||          ||||||||||||||||    
T  28387395 atctcaagaaatctcatctttttatgaaagacttttttttgttaaaattaaactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 28387494  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28387495 ttcgaaatttgaatgaatttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatctt 28387594  T
Q  215 gattgaata 223  Q
    |||||||||    
T  28387595 gattgaata 28387603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 48668795 - 48668982
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgatt 132  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  48668795 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacagaatcccacaaaatccaatttattaaacaatctttcgaaatttgaataatt 48668894  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||  |||       || |||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  48668895 ttgaataccacgtgactttttttaagtgatgaaaa---atgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaata 48668982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 33 - 223
Target Start/End: Complemental strand, 45272765 - 45272577
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgatt 132  Q
    |||||||||||||| || |||||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||| |||    
T  45272765 aaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatctcacaaaatccaatttattaaac-atccttcgaaatttaaataatt 45272667  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| |||        || |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  45272666 ttgaataccacgagattttttttaagtgatgaaaagtcttgattgaatacctcaagac-tttttaaaatgacaaagagttttgattgaata 45272577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 49231008 - 49230876
Alignment:
Q  91 aaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagac 190  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  49231008 aaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 49230909  T
Q  191 ttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||||||||||||||||    
T  49230908 ttttttaaaatgacaaagagtcttgattgaata 49230876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 21222341 - 21222137
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  21222341 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcg 21222242  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||| | ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  21222241 aaatttgaatgattttgaatacctctagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 21222142  T
Q  219 gaata 223  Q
    |||||    
T  21222141 gaata 21222137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 35279866 - 35279662
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| | || ||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  35279866 taagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 35279767  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||| |||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  35279766 aaatttaaatgattttgaataccactagactttttttaagtgattaatagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 35279667  T
Q  219 gaata 223  Q
    |||||    
T  35279666 gaata 35279662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 19451814 - 19452018
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||| ||||||||    
T  19451814 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacgatccttcg 19451913  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || |||||||||| |||||| |||||||||||| |||||||||||| ||||||||    
T  19451914 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattaaataccacaagactttttttaaatgacaaagaatcttgatt 19452013  T
Q  219 gaata 223  Q
    |||||    
T  19452014 gaata 19452018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 9577498 - 9577642
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||       || |||| |||||| |||||| |    
T  9577498 acaaaatccatcaaaatccaatttattaaacaatccttctaaatttgaatgattttgaatatcacaagactttttttaagtgataaaaagttttgattta 9577597  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||    
T  9577598 atatctcaagacttttttaaaatgacaaagggtcttgattgaata 9577642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 33025697 - 33025502
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaat 128  Q
    ||||||||||||| |||||||||||||| ||||| |  |||||||  | || ||||||||||||||||  || |||||||||||||||| ||||||||||    
T  33025697 taagaaatctcatgttttcatgaaagactttttcatgctaaaattttattagaaaatcccacaaaatctgatgtattaaacaatccttcaaaatttgaat 33025598  T
Q  129 gattttgaataccacaagacnnnnnnnaaatgatgaaaag-tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||       || |||| || || | ||||||||||||| ||||| ||||| |||||| |||||| |||||||||||||    
T  33025597 gattttgaataccacaagactttttttaagtgattaagagtttttgattgaataccacaagaatttttaaaaatgtcaaagaatcttgattgaata 33025502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 223
Target Start/End: Original strand, 50192560 - 50192761
Alignment:
Q  33 aaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaat 122  Q
    ||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||| ||||    
T  50192560 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcaaaat 50192659  T
Q  123 ttgaatgattttgaataccacaagac-nnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaa 221  Q
    ||||||||||||||||||||| ||||        || |||| || ||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  50192660 ttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaagacttttttaaaatgacaaggaatcttgattgaa 50192759  T
Q  222 ta 223  Q
    ||    
T  50192760 ta 50192761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 28824379 - 28824582
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||| || |||||| ||||| | |||||||| | ||| ||||||||||||||||||          ||||||||||||||| ||||    
T  28824379 taagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc-ttcg 28824477  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||||||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||| | ||||||||    
T  28824478 aaatttgaatgattttgaataccacaagactgtttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaataatcttgatt 28824577  T
Q  219 gaata 223  Q
    |||||    
T  28824578 gaata 28824582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 35679130 - 35679338
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| | |||||||||||| ||||| |  ||||||| ||||| |||||||||  |||||||          ||||||||||||||||    
T  35679130 atcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatccatcaaaatctgatttattaaacaatcc 35679229  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||||||||||||||||||||||| |||       || |||| || ||||||||||||||||  ||||| |||||| |||||||||||| ||||    
T  35679230 ttcgaaatttgaatgattttgaataccacatgactttttttaagtgattaagagtcttgattgaatactacaagattttttttaaatgacaaagaatctt 35679329  T
Q  215 gattgaata 223  Q
    |||||||||    
T  35679330 gattgaata 35679338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 6304258 - 6304463
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||||||| |||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  6304258 taagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 6304357  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaag-tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgat 217  Q
    ||||||||||||||||||||||||| ||||       || |||| || || | ||| ||||||||| |||||||||||| |||||||||||| |||||||    
T  6304358 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtttttggttgaataccacaagactttttttaaatgacaaagaatcttgat 6304457  T
Q  218 tgaata 223  Q
    ||||||    
T  6304458 tgaata 6304463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 45760015 - 45760220
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| ||||||| ||| || ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  45760015 taagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 45760114  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagac-ttttttaaaatgacaaagagtcttgat 217  Q
    || |||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| || ||| ||||||||| ||||||||| |||||||    
T  45760115 aagtttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaattgacaaagaatcttgat 45760214  T
Q  218 tgaata 223  Q
    ||||||    
T  45760215 tgaata 45760220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 47780909 - 47780701
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| ||||||||||| || ||||| | |||||||| ||||| ||||||||||||||||||          ||||||||||||||||    
T  47780909 atcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcc 47780810  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||  || |||||||||||||||||| ||| ||||       || |||| || ||||||||||||||||| || ||||||||| |||||||| | | ||||    
T  47780809 ttttaattttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacatataatctt 47780710  T
Q  215 gattgaata 223  Q
    |||||||||    
T  47780709 gattgaata 47780701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 49198275 - 49198478
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||||||| |||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  49198275 taagaaatatcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 49198374  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||||||||||||||||||||||   ||       || |||| || |||||| |||||||||| ||| |||||||| |||||||||||| ||||||||    
T  49198375 aaatttgaatgattttgaataccactgaactttttttaagtgattaagagtctt-attgaataccacaaaactttttttaaatgacaaagaatcttgatt 49198473  T
Q  219 gaata 223  Q
    |||||    
T  49198474 gaata 49198478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 32589019 - 32589163
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||       || ||||||| ||||||||||||    
T  32589019 acaaaatccatcaaaatccgatttattaaacaatccttcaaaatttgaatgattttgaataccacaagacttcttttaagtgatgaagagtcttgattga 32589118  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    || || ||||| | || |  ||||| |||||||||||||||||||    
T  32589119 atgccacaagattcttgtttaatgataaagagtcttgattgaata 32589163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 730283 - 730138
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaa-tgatgaaaagtcttgattg 177  Q
    |||||||||  |||||||  |||||||||||||| | |||||||||||||||||||||||||||| ||||        || |||| || |||||||||||    
T  730283 acaaaatccatcaaaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattg 730184  T
Q  178 aatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||    
T  730183 aataccacaagactttttttaaatgacaaagaatcttgattgaata 730138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 8141243 - 8141338
Alignment:
Q  128 tgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||| ||||||       || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8141243 tgattttgaatacctcaagactttttttaagtgatgaatagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 8141338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 45536124 - 45535934
Alignment:
Q  43 ttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaatttgaatgatt 132  Q
    |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||| ||||||||||||||||||    
T  45536124 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatctttcgaaatttgaatgatt 45536025  T
Q  133 ttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| ||||       ||  ||| || ||||||||||||||||| ||| ||||| || |||||||||||| | |||||||||||    
T  45536024 ttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaacactttgtttaaatgacaaagaatattgattgaata 45535934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 223
Target Start/End: Complemental strand, 47784532 - 47784377
Alignment:
Q  67 taaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaa 166  Q
    |||||||  |||| |||||| |||||||||||||||||||||||||| || ||| ||||||| |||||||||||||||||||       ||||||  ||     
T  47784532 taaaatttaactagaaaatctcacaaaatccaatttattaaacaatctttagaagtttgaataattttgaataccacaagac-ttttttaaatgacaaag 47784434  T
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  47784433 agtcttgattgaataccacaagactttttttaacttgcaaaaagtcttgattgaata 47784377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 47654357 - 47654562
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| ||||||||||| || ||||| |  ||||||| | ||| ||||| ||||||||||||          ||||||||||||||||||||    
T  47654357 taagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcg 47654456  T
Q  119 aaatttgaatgattttgaataccacaagac-nnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgat 217  Q
    |||||||||| |||||||||||||| ||||        || |||| || ||| ||||||||||||| |||||||| ||| |||||||||||| |||||||    
T  47654457 aaatttgaataattttgaataccactagacttttttttaagtgattaagagttttgattgaataccacaagacttcttttaaatgacaaagaatcttgat 47654556  T
Q  218 tgaata 223  Q
    ||||||    
T  47654557 tgaata 47654562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 37014642 - 37014850
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    ||||||||||||||||| |||| |||| |||| ||||| |  ||||||| ||||| ||||||| ||||||||||          |||||| ||||||||     
T  37014642 atcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaaattcaatttataaaacaatct 37014741  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    || |||||||||||||||||||||| ||||||||       || ||||||| | | ||||||||||||| |||||||| ||  |||||||||||||||||    
T  37014742 ttagaaatttgaatgattttgaatatcacaagactttttttaagtgatgaagaatattgattgaataccacaagacttcttctaaatgacaaagagtctt 37014841  T
Q  215 gattgaata 223  Q
     ||||||||    
T  37014842 aattgaata 37014850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 49418278 - 49418074
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||  ||||| |  ||||||| || || ||||||||||||||||||          |||||||||||||||||| |    
T  49418278 taagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttg 49418179  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || |||||| |||||||||| ||  | |||||| ||||||||| || ||||||||    
T  49418178 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccacataattttttttaaatgacaatgaatcttgatt 49418079  T
Q  219 gaata 223  Q
    |||||    
T  49418078 gaata 49418074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 31572203 - 31572329
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||||||||||||  ||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  31572203 taagaaatctcatgatttcatgaaagactttttcatcctaaaatttcactataaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 31572302  T
Q  119 aaatttgaatgattttgaataccacaa 145  Q
    |||||| ||||||||||||||||||||    
T  31572303 aaatttaaatgattttgaataccacaa 31572329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 29556236 - 29556094
Alignment:
Q  81 aaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaat 180  Q
    |||||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||        || |||| || ||||||||||||||    
T  29556236 aaaatccatcaaaatctaatttattaaacaatctttcgaaatttgaatgattttgaataacactagattttttttaagtgattaagagtcttgattgaat 29556137  T
Q  181 acctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    | | |||||||||||| |||| |||| || |||| ||||||||    
T  29556136 aacacaagactttttttaaataacaatgaatcttaattgaata 29556094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 48524490 - 48524309
Alignment:
Q  52 aagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcgaaatttgaatgattttgaatacc 141  Q
    ||||| ||||| | |||||||| ||||| ||||||||||||||||||          ||||||||||||||| ||| ||||||||||||||||||||| |    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttgaatgattttgaatatc 48524391  T
Q  142 acaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||       || |||| || ||| |||||| |||||| || || |||||| |||||||||| | |||||||||||||    
T  48524390 acaagactttttttaagtgattaagagttttgattaaataccacatgaatttttttaaatgacaaaaaatcttgattgaata 48524309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 955896 - 955823
Alignment:
Q  67 taaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatac 140  Q
    ||||||| ||||| |||||||  |||||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  955896 taaaatttcactagaaaatccatcaaaatctgatttattaaacaacccttcgaaatttgaatgattttgaatac 955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 22183457 - 22183360
Alignment:
Q  126 aatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||| ||||       || |||| || | ||||||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  22183457 aatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaata 22183360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 31622527 - 31622591
Alignment:
Q  81 aaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaa 145  Q
    |||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||||| ||||    
T  31622527 aaaatctcacaaaatccgatttattaaacaatcttttgaaatttgaatgattttgaatacaacaa 31622591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 953865 - 953809
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||||    
T  953865 agtcttgatcgaataccacaagactttttttaaatgacaaagaatcttgattgaata 953809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 51085918 - 51085860
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 148  Q
    |||||||||||||||| || |||||||| |||||||||| |||||||||||||| ||||    
T  51085918 caaaatccaatttatttaataatccttcaaaatttgaattattttgaataccacgagac 51085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 15835249 - 15835305
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  15835249 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 15835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 19452046 - 19452102
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||   |||||||||||||||||||    
T  19452046 agtcttgattgaataccacaagactttttttaaattggaaagagtcttgattgaata 19452102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 25612161 - 25612105
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  25612161 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 25612105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 28824570 - 28824624
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| |||| | |||||||||||||||||||    
T  28824570 tcttgattgaataacacaagactttttttaaattagaaagagtcttgattgaata 28824624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 49198466 - 49198519
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||    
T  49198466 tcttgattgaataacacaagacttttttaaattga-aaagagtcttgattgaata 49198519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 10896882 - 10896845
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaat 201  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  10896882 aaaagtcttgattgaatacctaaagacttttttaaaat 10896845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 1928406 - 1928442
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  1928406 aaaagtcttgattgaatacctaaagacttttttaaaa 1928442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 18798495 - 18798439
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  18798495 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 18798439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 29219292 - 29219236
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  29219292 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 29219236  T

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Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 36402329 - 36402293
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  36402329 aaaagtcttgattgaatacctaaagacttttttaaaa 36402293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 49230890 - 49230834
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  49230890 agtcttgattgaataccacaagactttttttaatttgcaaaaagtcttgattgaata 49230834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 51701584 - 51701528
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||||||| |||| ||||  |||| |||||||||||||||    
T  51701584 agtcttgattgaataccacaagactatttttaaattgcaaaaagtcttgattgaata 51701528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 48524326 - 48524267
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||| ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  48524326 aaaaatcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 48524267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 730150 - 730096
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  730150 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 730096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 953821 - 953767
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  953821 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 953767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 14494211 - 14494157
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  14494211 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 14494157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 14494237 - 14494199
Alignment:
Q  185 caagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  14494237 caagactttttttaaatgacaaagaatcttgattgaata 14494199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 19452006 - 19452060
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  19452006 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 19452060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 28387591 - 28387645
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||  ||||||||||| ||||  |||| |||||||||||||||    
T  28387591 tcttgattgaataccaaaagactttttttaaattgcaaaaagtcttgattgaata 28387645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 35679326 - 35679380
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||| |||||||||||| ||||   |||||| ||||||||||||    
T  35679326 tcttgattgaataccacaagactttttttaaattgaaaagagccttgattgaata 35679380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 17994704 - 17994741
Alignment:
Q  86 cccacaaaatccaatttattaaacaatccttcgaaatt 123  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  17994704 cccacaaaatacaatttattaaacaatccttcaaaatt 17994741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 6312578 - 6312522
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||| |||||||||| ||| |||||||| ||||  |||| |||||||||||||||    
T  6312578 agtcttaattgaataccacaaaactttttttaaattgcaaaaagtcttgattgaata 6312522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 8141324 - 8141380
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| ||| |||||||| || |  |||| |||||||||||||||    
T  8141324 agtcttgattgaataccacaaaactttttttaagttgcaaaaagtcttgattgaata 8141380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 25831084 - 25831116
Alignment:
Q  191 ttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||| ||||||||||||    
T  25831084 ttttttaaaatgacaaagagccttgattgaata 25831116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 29208837 - 29208801
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  29208837 aaaagtcttgattgaatacctaaagacatttttaaaa 29208801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29396584 - 29396640
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||  |||| |||||| ||||  |||| |||||||||||||||    
T  29396584 agtcttgattgaataccaaaagattttttttaaattgcaaaaagtcttgattgaata 29396640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 33243312 - 33243348
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| || ||||||||||||    
T  33243312 aaaagtcttgattgaatacctaaaaacttttttaaaa 33243348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 33263485 - 33263521
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| || ||||||||||||    
T  33263485 aaaagtcttgattgaatacctaaaaacttttttaaaa 33263521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 42657795 - 42657763
Alignment:
Q  165 aaagtcttgattgaatacctcaagactttttta 197  Q
    ||||||||||||||||||| |||||||||||||    
T  42657795 aaagtcttgattgaataccacaagactttttta 42657763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 45535944 - 45535892
Alignment:
Q  171 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  45535944 ttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 45535892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 46328046 - 46327990
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| ||| |||||||||||    
T  46328046 agtcttgattgaataccacaagactttttttaagttgcaaaaagttttgattgaata 46327990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 7e-73; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 30385070 - 30385266
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| |||||||||||||||||||||||||||  ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30385070 atctcaagaaatctcatcttttcatgaaagac--tttgttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 30385167  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || ||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30385168 gaatgattttgaataccacaagactttttttaagtgatgaaaatttttgattgaatacctcaatacttttttaaaatgacaaagagtcttgattgaata 30385266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 31895900 - 31895692
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||          ||||||||||||||||    
T  31895900 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 31895801  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31895800 ttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacttcaagacttttttaaaatgacaaagagtctt 31895701  T
Q  215 gattgaata 223  Q
    |||||||||    
T  31895700 gattgaata 31895692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 34773608 - 34773405
Alignment:
Q  30 aagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 119  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||          |||||||||||||||||||||    
T  34773608 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactgcaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34773509  T
Q  120 aatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 219  Q
    ||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34773508 aatttgaatgattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 34773409  T
Q  220 aata 223  Q
    ||||    
T  34773408 aata 34773405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 14262434 - 14262642
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| |||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  14262434 atctcaagaaatcccatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 14262533  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||| |||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14262534 ttcgaaatttaaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagactttttaaaaatgacaaagagtctt 14262633  T
Q  215 gattgaata 223  Q
    |||||||||    
T  14262634 gattgaata 14262642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 34759051 - 34759260
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||          |||||||||||||||||||||    
T  34759051 atctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcc 34759150  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagac-ttttttaaaatgacaaagagtct 213  Q
    || |||||||||||||||||||||||||||||||       || |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  34759151 ttggaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacttcaagactttttttaaaatgacaaagagtct 34759250  T
Q  214 tgattgaata 223  Q
    ||||||||||    
T  34759251 tgattgaata 34759260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 31067687 - 31067567
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31067687 atctcaagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 31067588  T
Q  125 gaatgattttgaataccacaa 145  Q
    |||||||||||||||||||||    
T  31067587 gaatgattttgaataccacaa 31067567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 7497279 - 7497072
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcc--------ca-caaaatccaatttattaaacaatcct 115  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||        || ||||||||||||||||||||| ||||    
T  7497279 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccacaaaatccatcaaaatccaatttattaaacactcct 7497180  T
Q  116 tcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttg 215  Q
    |||||||||||||||||||||||||||||||||       || ||||||||| ||||||||||||||| |||||||||||| || |  |||  |||||||    
T  7497179 tcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaataccacaagactttttttaagttgcaacaagtcttg 7497080  T
Q  216 attgaata 223  Q
    ||||||||    
T  7497079 attgaata 7497072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 6197483 - 6197687
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  6197483 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 6197582  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  6197583 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 6197682  T
Q  219 gaata 223  Q
    |||||    
T  6197683 gaata 6197687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 2300743 - 2300947
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  2300743 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatccttcg 2300842  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    |||||||||||||||| |||||||  ||||       || |||| || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  2300843 aaatttgaatgattttcaataccagtagactttttttaagtgatcaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 2300942  T
Q  219 gaata 223  Q
    |||||    
T  2300943 gaata 2300947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 4200438 - 4200541
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  4200438 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaattt 4200537  T
Q  125 gaat 128  Q
    ||||    
T  4200538 gaat 4200541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 217
Target Start/End: Complemental strand, 7051987 - 7051847
Alignment:
Q  77 ctacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgatt 176  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||       || ||||||| ||||||||||    
T  7051987 ctacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatatcacacgactttttttaagtgatgaagagtcttgatt 7051888  T
Q  177 gaatacctcaagacttttttaaaatgacaaagagtcttgat 217  Q
    | ||||| |||||||||||| |||||||||||| |||||||    
T  7051887 gtataccacaagactttttttaaatgacaaagaatcttgat 7051847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 1391824 - 1391620
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||| |||||||| |||||||||||||| ||||| |   |||||| ||||| ||||||||||||||||||          |||||||||||||||||||     
T  1391824 taaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcc 1391725  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| ||||||||| || ||||||||| || ||||||||    
T  1391724 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttatttaaatgacaatgaatcttgatt 1391625  T
Q  219 gaata 223  Q
    |||||    
T  1391624 gaata 1391620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 28002805 - 28002661
Alignment:
Q  79 acaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||||  |||||||  ||||||||||||||||||| ||||||||||||||||||||| ||| ||||       || |||| || ||||||||||||    
T  28002805 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattga 28002706  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||  ||||||||||| |||||||||| | |||||||||||||    
T  28002705 ataccagaagactttttttaaatgacaaaaaatcttgattgaata 28002661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 29076737 - 29076594
Alignment:
Q  81 aaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac-nnnnnnnaaatgatgaaaagtcttgattgaa 179  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||| || ||||        || |||| || | ||| |||||||    
T  29076737 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatactactagacttttttttaagtgattaagaatctagattgaa 29076638  T
Q  180 tacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||| |||||||||||| |||||||||||| |||||||||||||    
T  29076637 taccacaagactttttttaaatgacaaagaatcttgattgaata 29076594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 29111711 - 29111567
Alignment:
Q  81 aaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac--nnnnnnnaaatgatgaaaagtcttgattga 178  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||| || ||||         || |||| || | ||| ||||||    
T  29111711 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatactactagactttttttttaagtgattaagaatctagattga 29111612  T
Q  179 atacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||    
T  29111611 ataccacaagactttttttaaatgacaaagaatcttgattgaata 29111567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 3848342 - 3848208
Alignment:
Q  87 ccacaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctca 186  Q
    ||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||| ||       || |||||  ||||||||||||| |||| ||    
T  3848342 ccacaaaattcaatttattaaacaatcattcaaaatttaaatgattttgaataccacaaaactttttttaagtgatg--aagtcttgattgattaccaca 3848245  T
Q  187 agacttttttaaaatgacaaagagtcttgattgaata 223  Q
    | |||| ||| |||||||||| ||| |||||||||||    
T  3848244 atacttgttttaaatgacaaaaagttttgattgaata 3848208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 657065 - 656962
Alignment:
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||| ||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||| ||||| |||||| ||||||||    
T  657065 aaatttgaatgatttagaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatg-caaagaatcttgatt 656967  T
Q  219 gaata 223  Q
    |||||    
T  656966 gaata 656962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 31895706 - 31895650
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  31895706 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 31895650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 34773419 - 34773363
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  34773419 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 34773363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 10644016 - 10644052
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  10644016 aaaagtcttgattgaatacctaaagacttttttaaaa 10644052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 30877934 - 30877898
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||    
T  30877934 aaaagtcttgattgaatacctaaagacttttttaaaa 30877898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 1391632 - 1391578
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  1391632 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 1391578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 2300935 - 2300989
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  2300935 tcttgattgaataacacaagactttttttaaattgaaaagagtcttgattgaata 2300989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 6197675 - 6197729
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  6197675 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 6197729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 34527615 - 34527652
Alignment:
Q  86 cccacaaaatccaatttattaaacaatccttcgaaatt 123  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  34527615 cccacaaaatacaatttattaaacaatccttcaaaatt 34527652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 3848170 - 3848118
Alignment:
Q  171 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| |||||||||||| || |  |||||| |||||||||||||    
T  3848170 ttgattgaataccacaagactttttttaagttgcaaagaatcttgattgaata 3848118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 14262628 - 14262684
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| | |||||||||||||    
T  14262628 agtcttgattgaataccacaagactttttttaagttgcaaaaaatcttgattgaata 14262684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 14077 - 13879
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||  |||||||||||||||||||||||| || |||||||    
T  14077 atctcaagaaatctcatcttttcatgaaagactttttcttattaaaatcccactacaaaatccatcaaaatccaatttattaaacaatcttttgaaattt 13978  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13977 gaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaatacttttttaaaatgacaaagagtcttgattgaata 13879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 21250 - 21448
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaattt 124  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||  |||||||||||||||||||||||| || |||||||    
T  21250 atctcaagaaatctcatcttttcatgaaagactttttcttattaaaatcccactacaaaatccatcaaaatccaatttattaaacaatcttttgaaattt 21349  T
Q  125 gaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||||||||||       || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21350 gaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaatacttttttaaaatgacaaagagtcttgattgaata 21448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 28547 - 28463
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacacta-caaaatcccacaaaatccaatttattaaa 108  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||  ||||| ||||||||  |||||||||||||||||||    
T  28547 atctcaagaaatctcatcttttcatgaaagactttttcttattaaaatcccactaccaaaatccatcaaaatccaatttattaaa 28463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 10765 - 10557
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||          ||||||||||||||||    
T  10765 atctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcc 10666  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    || ||||||||||||||||||||||||||||||        ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10665 tttgaaatttgaatgattttgaataccacaagattttttttaaatgatgagaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 10566  T
Q  215 gattgaata 223  Q
    |||||||||    
T  10565 gattgaata 10557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 10571 - 10515
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  10571 agtcttgattgaataccacaagactttttttaaattgcaaaaagtcttgattgaata 10515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 105; Significance: 1e-52; HSPs: 3)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 4330 - 4197
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaaga 189  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  4330 caaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaga 4231  T
Q  190 cttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||| |||||||||||||||||||||    
T  4230 cttttttaaaattacaaagagtcttgattgaata 4197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 4211 - 4155
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  4211 agtcttgattgaataccacaagactttttttaatttgcaaaaagtcttgattgaata 4155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 4172 - 4135
Alignment:
Q  164 aaaagtcttgattgaatacctcaagacttttttaaaat 201  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  4172 aaaagtcttgattgaataccacaagactttttcaaaat 4135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 39619 - 39827
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatcc 114  Q
    |||| ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||          ||||||||||||||| |||||    
T  39619 atctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaataatcc 39718  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||| ||||||||||||||||||||||| |||       || ||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||    
T  39719 ttcgaagtttgaatgattttgaataccacatgacattttttaagtgatgaaaaatcttgattgaatagttcaagactttttaaaaatgacaaagagtctt 39818  T
Q  215 gattgaata 223  Q
    |||||||||    
T  39819 gattgaata 39827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 1068 - 860
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca---------atttattaaacaatcct 115  Q
    |||| |||||||||||| |||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||         |||||||||| ||| ||    
T  1068 atctcaagaaatctcatattttaatgaaagactttttctagttaaaattacactacaaaatcccacaaaatccatcaaaatctatttattaaataattct 969  T
Q  116 tcgaaatttgaatgattttgaataccacaagacnnnnnnnaaa-tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctt 214  Q
    |||||||||||||||||||||||||||||||||        || |||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  968 tcgaaatttgaatgattttgaataccacaagacttttttttaagtgatgaaaagtcttgattgaatacctcatgatttttttaaaatgacaaagagtctt 869  T
Q  215 gattgaata 223  Q
    |||||||||    
T  868 gattgaata 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 874 - 818
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||||||||||||||    
T  874 agtcttgattgaataccacaagactttttttaagttgcaaaaagtcttgattgaata 818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 100412 - 100208
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||| ||||| |||| |||||||||||||          |||||||||||||||||| |    
T  100412 taagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatccatcaaaatttgatttattaaacaatcctttg 100313  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || |||||||||||| |||| |||||||||||| |||||||||||| ||||||||    
T  100312 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgagtaccacaagactttttttaaatgacaaagaatcttgatt 100213  T
Q  219 gaata 223  Q
    |||||    
T  100212 gaata 100208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 15039 - 15243
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||||||| |||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  15039 taagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 15138  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||  |||||||||||| |||||||||||| ||||||||    
T  15139 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaagactttttttaaatgacaaagaatcttgatt 15238  T
Q  219 gaata 223  Q
    |||||    
T  15239 gaata 15243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 15231 - 15285
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  15231 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 15285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 15682 - 15886
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||||||| |||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||||    
T  15682 taagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 15781  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||  |||||||||||| |||||||||||| ||||||||    
T  15782 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaagactttttttaaatgacaaagaatcttgatt 15881  T
Q  219 gaata 223  Q
    |||||    
T  15882 gaata 15886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 15874 - 15928
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  15874 tcttgattgaataacacaagactttttttaaattggaaagagtcttgattgaata 15928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 14965 - 14878
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccaatttattaaacaat 112  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14965 atcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaat 14878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 58078 - 58286
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaa----------atccaatttattaaacaatcc 114  Q
    |||| ||||||||||||||||||||||||||  || |||| ||||||||| ||||||||||||||||||          ||||||||||||||||||||     
T  58078 atctcaagaaatctcatcttttcatgaaagattttctcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatca 58177  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatg-aaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtct 213  Q
    ||||||||||||||||||||||||||||||  ||       || ||||| ||||||||||| |||||||| ||||||||||||||  || |||| |||||    
T  58178 ttcgaaatttgaatgattttgaataccacagaactttttttaagtgatgaaaaagtcttgactgaataccacaagacttttttaagttg-caaaaagtct 58276  T
Q  214 tgattgaata 223  Q
    ||||||||||    
T  58277 tgattgaata 58286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 36909 - 37089
Alignment:
Q  25 atcttaagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatccca----------caaaatccaatttattaaacaatcc 114  Q
    |||| ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||          ||||||||||||||||||||||| |    
T  36909 atctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatgc 37008  T
Q  115 ttcgaaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttt 195  Q
    |||||||||| |||||||||||||||| ||||||       ||||||  || ||||||||||||||| | |||||||||||    
T  37009 ttcgaaattttaatgattttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatagcacaagacttttt 37089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 37027 - 37075
Alignment:
Q  175 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37027 ttgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 37075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 102296 - 102090
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| |||| ||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||          ||||||||||||||| ||||    
T  102296 taagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatctttcg 102197  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaaga--cttttttaaaatgacaaagagtcttga 216  Q
    ||||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||  ||||||| |||||||||||| ||||||    
T  102196 aaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactctttttttaaatgacaaagaatcttga 102097  T
Q  217 ttgaata 223  Q
    |||||||    
T  102096 ttgaata 102090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 195
Target Start/End: Original strand, 38611 - 38786
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca-----at----ttattaaacaatccttcga 119  Q
    ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||| ||||||||||||||||||     ||    |||||||||||||||||||    
T  38611 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgattattaaacaatccttcga 38710  T
Q  120 aatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttt 195  Q
    |||||||||||||||||||||||| ||||       || |||| || ||||||||||||||||| |||||||||||    
T  38711 aatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacttttt 38786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 38901 - 39105
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    |||| |||||||| |||||||||||||| ||||| |   |||||| ||||| ||||||||||||||||||          |||||||||||||||||||     
T  38901 taaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcc 39000  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||| ||| ||||       || |||| || |||||| |||||||||| |||||||||||| |||||| ||||| ||||||||    
T  39001 aaatttgaatgattttgaatatcactagacttcttttaagtgattaagagtctttattgaataccacaagactttttttaaatgataaagaatcttgatt 39100  T
Q  219 gaata 223  Q
    |||||    
T  39101 gaata 39105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 545 - 749
Alignment:
Q  29 taagaaatctcatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcg 118  Q
    ||||||||||||| ||||| | |||||| ||||| ||  |||||| ||||| ||||| ||||||||||||          |||||||||||||||||||     
T  545 taagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatccttcc 644  T
Q  119 aaatttgaatgattttgaataccacaagacnnnnnnnaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgatt 218  Q
    ||||||||||||||||||||||||| | |        || |||| || ||| ||||||||||||| ||| |||||||| |||||||||||| ||||||||    
T  645 aaatttgaatgattttgaataccactaaaaaaaatttaagtgattaagagttttgattgaataccacaatactttttttaaatgacaaagaatcttgatt 744  T
Q  219 gaata 223  Q
    |||||    
T  745 gaata 749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 737 - 791
Alignment:
Q  169 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||| | |||||||||||| ||||   |||||||||||||||||||    
T  737 tcttgattgaataacacaagactttttttaaattgtaaagagtcttgattgaata 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 50; Significance: 9e-20; HSPs: 5)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 233795 - 233734
Alignment:
Q  162 tgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  233795 tgaaaagttttgattgaagaccttaagacttttttaaaatgacaaagagtcttgattgaata 233734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 234643 - 234582
Alignment:
Q  162 tgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  234643 tgaaaagttttgattgaagaccttaagacttttttaaaatgacaaagagtcttgattgaata 234582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 222627 - 222566
Alignment:
Q  162 tgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||||||| |||||||||||    
T  222627 tgaaaagttttgattgaagaccttaagacttttttaaaatgacaaagagttttgattgaata 222566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 233748 - 233692
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||  || |  |||| |||||||||||||||    
T  233748 agtcttgattgaataccacaagactttttctaagttgcaaaaagtcttgattgaata 233692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 234596 - 234540
Alignment:
Q  167 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 223  Q
    ||||||||||||||||| |||||||||||  || |  |||| |||||||||||||||    
T  234596 agtcttgattgaataccacaagactttttctaagttgcaaaaagtcttgattgaata 234540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 3709 - 3767
Alignment:
Q  40 atcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatcca 98  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  3709 atctttttatgaaagaccttttcttgttaaaattacactacaaaatcccacaaaatcca 3767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 199955 - 199905
Alignment:
Q  90 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatac 140  Q
    |||||| |||||||||||||| || ||| |||||||||||||||| |||||    
T  199955 caaaattcaatttattaaacactctttcaaaatttgaatgattttaaatac 199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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