View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16735_high_5 (Length: 634)

Name: NF16735_high_5
Description: NF16735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16735_high_5
NF16735_high_5
[»] chr1 (113 HSPs)
chr1 (1-621)||(27257472-27258111)
chr1 (103-299)||(49971007-49971203)
chr1 (99-313)||(52182595-52182808)
chr1 (99-244)||(47370882-47371026)
chr1 (104-278)||(42303712-42303888)
chr1 (345-513)||(52182311-52182480)
chr1 (99-279)||(48965829-48966008)
chr1 (99-244)||(25254185-25254329)
chr1 (98-215)||(49236318-49236435)
chr1 (111-242)||(15928237-15928368)
chr1 (144-278)||(49452417-49452551)
chr1 (362-473)||(49971580-49971692)
chr1 (103-278)||(42637479-42637653)
chr1 (110-191)||(2292591-2292672)
chr1 (99-235)||(8147975-8148110)
chr1 (99-231)||(34750991-34751123)
chr1 (381-505)||(5494753-5494876)
chr1 (99-234)||(11578454-11578588)
chr1 (381-499)||(45272993-45273110)
chr1 (98-222)||(43855065-43855189)
chr1 (99-206)||(34019653-34019760)
chr1 (103-202)||(51903534-51903633)
chr1 (381-499)||(15834689-15834806)
chr1 (99-234)||(1242637-1242769)
chr1 (99-243)||(3593881-3594038)
chr1 (391-516)||(47371589-47371714)
chr1 (160-278)||(28403322-28403441)
chr1 (391-498)||(4005067-4005174)
chr1 (155-266)||(19863513-19863623)
chr1 (394-499)||(3583573-3583678)
chr1 (391-496)||(48966505-48966610)
chr1 (160-237)||(50038026-50038103)
chr1 (104-184)||(3583311-3583391)
chr1 (99-242)||(4005972-4006128)
chr1 (99-242)||(5208613-5208769)
chr1 (148-279)||(32759440-32759572)
chr1 (391-475)||(35177224-35177308)
chr1 (391-498)||(1243320-1243427)
chr1 (391-498)||(9192024-9192131)
chr1 (391-498)||(26757615-26757722)
chr1 (224-312)||(35193656-35193746)
chr1 (391-498)||(41353421-41353528)
chr1 (392-499)||(46328412-46328519)
chr1 (391-498)||(51106892-51106999)
chr1 (391-473)||(7798525-7798607)
chr1 (381-499)||(8140888-8141005)
chr1 (392-473)||(5209383-5209464)
chr1 (99-176)||(35193745-35193822)
chr1 (381-473)||(1108377-1108468)
chr1 (99-242)||(9174495-9174651)
chr1 (381-516)||(48177097-48177232)
chr1 (389-473)||(49231459-49231543)
chr1 (391-470)||(33886874-33886953)
chr1 (391-470)||(33957297-33957376)
chr1 (381-499)||(6313002-6313119)
chr1 (99-157)||(18246882-18246940)
chr1 (381-499)||(25612518-25612635)
chr1 (381-499)||(29396089-29396206)
chr1 (391-473)||(32760113-32760195)
chr1 (99-157)||(41354143-41354201)
chr1 (99-157)||(51107905-51107963)
chr1 (391-486)||(8147329-8147424)
chr1 (160-231)||(33886366-33886437)
chr1 (160-231)||(33957815-33957886)
chr1 (99-137)||(7799163-7799201)
chr1 (391-473)||(11579114-11579196)
chr1 (381-499)||(25253492-25253609)
chr1 (98-152)||(26758317-26758371)
chr1 (179-276)||(226499-226596)
chr1 (400-516)||(9322181-9322297)
chr1 (381-465)||(15927332-15927415)
chr1 (381-473)||(18798904-18798995)
chr1 (391-499)||(28403960-28404068)
chr1 (381-516)||(25830904-25831038)
chr1 (169-244)||(35176657-35176732)
chr1 (99-137)||(33886292-33886330)
chr1 (99-137)||(33957922-33957960)
chr1 (166-275)||(40431784-40431894)
chr1 (394-467)||(3593277-3593350)
chr1 (400-473)||(18954490-18954563)
chr1 (391-499)||(49453074-49453183)
chr1 (1-73)||(7710349-7710420)
chr1 (381-473)||(38535801-38535892)
chr1 (381-473)||(38558019-38558110)
chr1 (1-73)||(41150620-41150691)
chr1 (166-242)||(41354046-41354121)
chr1 (167-242)||(18246963-18247038)
chr1 (160-231)||(30176888-30176958)
chr1 (98-137)||(30176994-30177033)
chr1 (391-486)||(49236980-49237075)
chr1 (99-137)||(1109029-1109067)
chr1 (391-473)||(34751586-34751668)
chr1 (172-242)||(51107807-51107877)
chr1 (381-499)||(51702021-51702138)
chr1 (392-473)||(21248490-21248571)
chr1 (103-140)||(32759382-32759419)
chr1 (99-136)||(49452359-49452396)
chr1 (1-73)||(323536-323607)
chr1 (1-73)||(1507129-1507200)
chr1 (1-73)||(2022717-2022788)
chr1 (1-73)||(17047399-17047470)
chr1 (1-73)||(17499274-17499345)
chr1 (1-73)||(19716515-19716586)
chr1 (1-73)||(19898306-19898377)
chr1 (1-73)||(26204943-26205014)
chr1 (170-242)||(26758241-26758312)
chr1 (1-69)||(31149826-31149893)
chr1 (1-73)||(36378417-36378488)
chr1 (391-463)||(42304514-42304586)
chr1 (1-73)||(42964535-42964606)
chr1 (1-73)||(47133961-47134032)
chr1 (1-73)||(50170706-50170777)
chr1 (1-73)||(50351699-50351770)
[»] chr3 (85 HSPs)
chr3 (100-312)||(25050140-25050352)
chr3 (118-312)||(21718097-21718290)
chr3 (99-267)||(43173514-43173682)
chr3 (362-516)||(7665552-7665705)
chr3 (98-245)||(4962023-4962168)
chr3 (100-242)||(24063942-24064083)
chr3 (144-278)||(7436915-7437049)
chr3 (362-516)||(45602403-45602557)
chr3 (377-473)||(25049875-25049971)
chr3 (144-279)||(33693877-33694012)
chr3 (100-217)||(7667403-7667520)
chr3 (103-242)||(22488419-22488563)
chr3 (100-242)||(53836563-53836704)
chr3 (103-266)||(1666502-1666665)
chr3 (99-231)||(53644751-53644882)
chr3 (367-499)||(52617614-52617747)
chr3 (391-476)||(16155165-16155250)
chr3 (391-499)||(21386499-21386607)
chr3 (99-279)||(49458974-49459169)
chr3 (389-516)||(39038498-39038625)
chr3 (99-231)||(40064798-40064925)
chr3 (381-499)||(26107754-26107871)
chr3 (101-219)||(27163017-27163135)
chr3 (381-499)||(48379575-48379692)
chr3 (391-498)||(8598638-8598745)
chr3 (113-279)||(21385821-21385980)
chr3 (391-473)||(9818579-9818661)
chr3 (381-499)||(20833322-20833439)
chr3 (381-499)||(52810783-52810900)
chr3 (391-499)||(7437586-7437694)
chr3 (392-499)||(17946653-17946760)
chr3 (381-516)||(23753047-23753181)
chr3 (166-245)||(30237978-30238057)
chr3 (100-231)||(37833345-37833475)
chr3 (100-191)||(45731315-45731406)
chr3 (391-498)||(49296095-49296202)
chr3 (391-473)||(4962746-4962828)
chr3 (113-191)||(27988263-27988341)
chr3 (391-497)||(33693236-33693342)
chr3 (381-499)||(37455272-37455389)
chr3 (381-499)||(40897556-40897673)
chr3 (391-473)||(49458362-49458444)
chr3 (381-499)||(50761758-50761875)
chr3 (381-499)||(50902967-50903084)
chr3 (381-499)||(51737345-51737462)
chr3 (392-505)||(54629270-54629383)
chr3 (99-242)||(49296719-49296874)
chr3 (98-157)||(8599658-8599717)
chr3 (381-516)||(31645919-31646053)
chr3 (95-137)||(9817988-9818030)
chr3 (381-499)||(18750068-18750185)
chr3 (423-499)||(21718460-21718536)
chr3 (99-155)||(25932150-25932206)
chr3 (144-200)||(32766605-32766661)
chr3 (394-465)||(43172939-43173010)
chr3 (391-486)||(53835953-53836048)
chr3 (180-242)||(1545266-1545328)
chr3 (178-244)||(9030497-9030563)
chr3 (391-473)||(22489499-22489581)
chr3 (99-137)||(27262003-27262041)
chr3 (167-242)||(8599560-8599635)
chr3 (98-137)||(47466817-47466856)
chr3 (144-231)||(47466876-47466962)
chr3 (116-231)||(49294253-49294367)
chr3 (381-467)||(36673810-36673895)
chr3 (381-499)||(44905513-44905630)
chr3 (101-138)||(7436859-7436896)
chr3 (144-231)||(27261896-27261983)
chr3 (160-231)||(9818066-9818136)
chr3 (99-138)||(33694031-33694070)
chr3 (440-499)||(45863248-45863307)
chr3 (391-434)||(49293846-49293889)
chr3 (395-470)||(53645332-53645407)
chr3 (155-244)||(25932049-25932137)
chr3 (381-435)||(27261435-27261488)
chr3 (1-73)||(21707782-21707853)
chr3 (1-73)||(25571046-25571117)
chr3 (113-157)||(32766661-32766705)
chr3 (1-73)||(35500272-35500343)
chr3 (1-73)||(37088952-37089023)
chr3 (1-73)||(41519216-41519287)
chr3 (1-73)||(42218284-42218355)
chr3 (1-73)||(45369540-45369611)
chr3 (1-73)||(54541435-54541506)
chr3 (1-73)||(54671596-54671667)
[»] chr7 (82 HSPs)
chr7 (100-291)||(27149281-27149472)
chr7 (99-279)||(42611126-42611306)
chr7 (115-290)||(33496746-33496921)
chr7 (145-312)||(26201210-26201379)
chr7 (99-273)||(23017598-23017772)
chr7 (362-517)||(26201775-26201930)
chr7 (99-278)||(1253843-1254021)
chr7 (103-244)||(21486780-21486921)
chr7 (377-473)||(11735190-11735286)
chr7 (377-516)||(27148806-27148945)
chr7 (389-499)||(12740795-12740905)
chr7 (379-473)||(33497095-33497189)
chr7 (381-499)||(44256418-44256535)
chr7 (361-505)||(42610589-42610733)
chr7 (99-243)||(43172720-43172877)
chr7 (160-278)||(6269036-6269155)
chr7 (99-244)||(31175155-31175300)
chr7 (381-499)||(37328332-37328449)
chr7 (381-516)||(8675739-8675874)
chr7 (381-473)||(48136891-48136982)
chr7 (144-279)||(5771541-5771674)
chr7 (391-498)||(14741405-14741512)
chr7 (144-231)||(21024590-21024677)
chr7 (389-499)||(18838835-18838945)
chr7 (381-499)||(29585939-29586056)
chr7 (97-242)||(37915396-37915554)
chr7 (381-499)||(44121596-44121713)
chr7 (400-516)||(32884179-32884295)
chr7 (381-505)||(41827747-41827870)
chr7 (391-498)||(4639888-4639995)
chr7 (144-231)||(14731756-14731843)
chr7 (144-231)||(35314053-35314140)
chr7 (390-473)||(37972548-37972631)
chr7 (381-499)||(510071-510188)
chr7 (99-157)||(4639219-4639277)
chr7 (391-473)||(14732309-14732391)
chr7 (381-499)||(28342736-28342853)
chr7 (145-231)||(38910998-38911083)
chr7 (381-499)||(40460377-40460494)
chr7 (172-244)||(16710165-16710237)
chr7 (172-244)||(17684401-17684473)
chr7 (381-473)||(39784558-39784649)
chr7 (411-499)||(43172132-43172220)
chr7 (391-473)||(16709439-16709519)
chr7 (391-473)||(17683675-17683755)
chr7 (381-467)||(7993614-7993699)
chr7 (391-473)||(21024070-21024152)
chr7 (381-499)||(28034511-28034628)
chr7 (381-499)||(29614458-29614575)
chr7 (381-499)||(29893397-29893514)
chr7 (381-499)||(33891897-33892014)
chr7 (381-499)||(39028512-39028629)
chr7 (427-499)||(33383099-33383171)
chr7 (145-205)||(42044177-42044237)
chr7 (1-73)||(47584885-47584956)
chr7 (98-157)||(14742205-14742264)
chr7 (160-231)||(37391963-37392033)
chr7 (381-499)||(3023359-3023476)
chr7 (144-242)||(14742056-14742153)
chr7 (99-137)||(21024697-21024735)
chr7 (381-499)||(23101716-23101833)
chr7 (391-473)||(35313561-35313643)
chr7 (166-242)||(4639299-4639374)
chr7 (1-73)||(21739385-21739456)
chr7 (1-73)||(35588270-35588341)
chr7 (196-255)||(31445975-31446034)
chr7 (102-137)||(37391892-37391927)
chr7 (391-437)||(1254482-1254528)
chr7 (391-473)||(19594215-19594296)
chr7 (381-435)||(21067869-21067922)
chr7 (103-137)||(35314160-35314194)
chr7 (391-472)||(23016997-23017078)
chr7 (391-476)||(38910482-38910567)
chr7 (225-278)||(42813711-42813764)
chr7 (1-73)||(9488061-9488132)
chr7 (1-73)||(17845230-17845301)
chr7 (392-504)||(21486115-21486227)
chr7 (1-73)||(27089072-27089143)
chr7 (1-73)||(27189158-27189229)
chr7 (1-73)||(33608138-33608209)
chr7 (1-73)||(42586827-42586898)
chr7 (1-73)||(46878707-46878778)
[»] chr5 (61 HSPs)
chr5 (99-312)||(29759189-29759401)
chr5 (103-312)||(16548531-16548740)
chr5 (104-312)||(21490162-21490369)
chr5 (100-279)||(29716216-29716395)
chr5 (104-278)||(31913978-31914152)
chr5 (99-245)||(35701866-35702012)
chr5 (377-516)||(16548846-16548985)
chr5 (98-242)||(5650128-5650272)
chr5 (99-206)||(33892262-33892369)
chr5 (99-242)||(7124228-7124371)
chr5 (400-499)||(15672705-15672804)
chr5 (377-506)||(29758677-29758805)
chr5 (105-277)||(36180108-36180280)
chr5 (106-233)||(3032758-3032885)
chr5 (166-277)||(4840885-4840996)
chr5 (101-206)||(34910162-34910267)
chr5 (99-223)||(21238203-21238326)
chr5 (391-499)||(39852797-39852905)
chr5 (391-498)||(7125180-7125287)
chr5 (391-476)||(33892857-33892942)
chr5 (391-499)||(5651202-5651310)
chr5 (395-499)||(29716810-29716914)
chr5 (99-206)||(2674509-2674616)
chr5 (391-473)||(2675089-2675171)
chr5 (391-505)||(4240133-4240247)
chr5 (389-499)||(13926358-13926468)
chr5 (391-473)||(21238774-21238856)
chr5 (390-499)||(4549924-4550033)
chr5 (381-473)||(1460804-1460895)
chr5 (381-473)||(5949564-5949655)
chr5 (144-231)||(25869313-25869400)
chr5 (391-516)||(37014264-37014389)
chr5 (400-484)||(21489893-21489977)
chr5 (98-157)||(28622507-28622566)
chr5 (391-473)||(16497751-16497833)
chr5 (99-157)||(37797459-37797517)
chr5 (148-245)||(16801217-16801314)
chr5 (97-137)||(32236886-32236926)
chr5 (391-486)||(28623182-28623277)
chr5 (103-137)||(25869420-25869454)
chr5 (391-473)||(34909596-34909678)
chr5 (400-473)||(25868803-25868876)
chr5 (213-278)||(31561420-31561485)
chr5 (1-73)||(2672069-2672140)
chr5 (1-73)||(11100037-11100108)
chr5 (98-206)||(19226232-19226339)
chr5 (144-228)||(36195726-36195810)
chr5 (166-242)||(37797539-37797614)
chr5 (144-235)||(28622566-28622656)
chr5 (144-187)||(32236946-32236989)
chr5 (381-467)||(13999752-13999837)
chr5 (427-477)||(24258534-24258584)
chr5 (381-499)||(40013363-40013480)
chr5 (1-58)||(5997315-5997372)
chr5 (1-62)||(13947537-13947597)
chr5 (1-73)||(12363009-12363080)
chr5 (1-73)||(14646769-14646840)
chr5 (1-73)||(27130989-27131060)
chr5 (1-98)||(31408746-31408844)
chr5 (1-73)||(35235133-35235204)
chr5 (391-455)||(37798135-37798199)
[»] chr4 (102 HSPs)
chr4 (104-312)||(872068-872289)
chr4 (98-290)||(55165949-55166141)
chr4 (99-313)||(24454139-24454353)
chr4 (98-245)||(29509373-29509520)
chr4 (98-279)||(46862256-46862437)
chr4 (99-273)||(24965804-24965977)
chr4 (99-245)||(32890519-32890665)
chr4 (100-242)||(17503227-17503368)
chr4 (99-279)||(50517702-50517882)
chr4 (377-508)||(871779-871909)
chr4 (103-272)||(12754922-12755093)
chr4 (99-219)||(33140992-33141112)
chr4 (99-242)||(23670917-23671060)
chr4 (126-278)||(26490616-26490767)
chr4 (378-516)||(55165486-55165624)
chr4 (144-273)||(53573698-53573827)
chr4 (99-231)||(25013988-25014120)
chr4 (98-206)||(41469635-41469743)
chr4 (370-497)||(24453867-24453987)
chr4 (99-276)||(41206719-41206908)
chr4 (103-219)||(26972990-26973106)
chr4 (110-242)||(29469768-29469899)
chr4 (381-473)||(41725566-41725657)
chr4 (391-499)||(49501199-49501307)
chr4 (391-499)||(49507264-49507372)
chr4 (99-206)||(40487063-40487170)
chr4 (104-206)||(8562509-8562611)
chr4 (99-185)||(56423416-56423502)
chr4 (391-499)||(29510083-29510191)
chr4 (99-187)||(40163317-40163405)
chr4 (381-516)||(29855926-29856060)
chr4 (391-473)||(6487335-6487417)
chr4 (98-278)||(22480237-22480417)
chr4 (390-516)||(49834499-49834625)
chr4 (391-473)||(50517197-50517279)
chr4 (95-204)||(23170111-23170220)
chr4 (392-473)||(23671392-23671473)
chr4 (99-204)||(26449183-26449287)
chr4 (391-516)||(29469124-29469249)
chr4 (390-499)||(32322493-32322602)
chr4 (400-473)||(33138804-33138877)
chr4 (99-183)||(6486757-6486841)
chr4 (391-498)||(8084188-8084295)
chr4 (391-473)||(46286713-46286795)
chr4 (381-505)||(28484316-28484440)
chr4 (394-499)||(32889874-32889979)
chr4 (368-473)||(40162793-40162897)
chr4 (103-206)||(9973405-9973507)
chr4 (381-499)||(5800391-5800508)
chr4 (391-473)||(9972777-9972859)
chr4 (391-473)||(24966536-24966618)
chr4 (391-473)||(26491140-26491222)
chr4 (381-499)||(27768491-27768608)
chr4 (389-499)||(30967007-30967117)
chr4 (144-242)||(42936980-42937078)
chr4 (391-473)||(51967281-51967363)
chr4 (100-157)||(8084893-8084950)
chr4 (1-73)||(4464853-4464924)
chr4 (381-473)||(5441855-5441946)
chr4 (256-312)||(17503365-17503421)
chr4 (144-219)||(4511416-4511491)
chr4 (381-499)||(23987624-23987740)
chr4 (391-473)||(42937428-42937510)
chr4 (381-467)||(48261537-48261622)
chr4 (381-499)||(54341569-54341686)
chr4 (99-137)||(54561863-54561901)
chr4 (391-473)||(56423992-56424074)
chr4 (408-473)||(14334398-14334463)
chr4 (381-473)||(37828087-37828178)
chr4 (202-277)||(40317095-40317170)
chr4 (202-277)||(40327169-40327244)
chr4 (98-137)||(51967780-51967819)
chr4 (391-473)||(8563375-8563457)
chr4 (144-278)||(21305775-21305909)
chr4 (391-473)||(21486519-21486601)
chr4 (391-473)||(26448635-26448717)
chr4 (144-206)||(29965893-29965955)
chr4 (381-499)||(50018619-50018736)
chr4 (381-499)||(51321283-51321400)
chr4 (391-473)||(54561223-54561305)
chr4 (144-206)||(54561782-54561843)
chr4 (441-477)||(2326728-2326764)
chr4 (98-138)||(4511357-4511397)
chr4 (400-472)||(41470352-41470424)
chr4 (98-137)||(42936921-42936960)
chr4 (103-157)||(2326376-2326430)
chr4 (103-137)||(29965839-29965873)
chr4 (103-137)||(53573644-53573678)
chr4 (9-73)||(4390885-4390948)
chr4 (1-73)||(7707061-7707132)
chr4 (1-73)||(9031409-9031480)
chr4 (110-150)||(14334967-14335007)
chr4 (1-73)||(18583513-18583584)
chr4 (1-73)||(25198718-25198789)
chr4 (1-73)||(40120547-40120618)
chr4 (1-73)||(43225129-43225200)
chr4 (1-73)||(45780172-45780243)
chr4 (173-225)||(51967695-51967747)
chr4 (392-516)||(54853143-54853267)
chr4 (9-73)||(55685617-55685680)
chr4 (1-73)||(56373106-56373177)
chr4 (173-225)||(56423500-56423552)
[»] chr2 (82 HSPs)
chr2 (99-312)||(3857860-3858073)
chr2 (99-280)||(31846479-31846660)
chr2 (100-312)||(43618014-43618236)
chr2 (103-278)||(34342854-34343028)
chr2 (110-273)||(42242413-42242576)
chr2 (104-273)||(9731558-9731734)
chr2 (104-278)||(40830241-40830415)
chr2 (377-508)||(3858423-3858554)
chr2 (103-230)||(32241803-32241931)
chr2 (377-473)||(15926382-15926478)
chr2 (144-279)||(18726975-18727110)
chr2 (126-245)||(38295049-38295168)
chr2 (391-516)||(2308729-2308854)
chr2 (99-280)||(2307868-2308047)
chr2 (98-237)||(32294667-32294810)
chr2 (103-231)||(45160613-45160740)
chr2 (99-277)||(43304588-43304766)
chr2 (391-499)||(15224208-15224316)
chr2 (381-516)||(10657840-10657974)
chr2 (378-473)||(32293917-32294011)
chr2 (104-187)||(38411938-38412021)
chr2 (144-278)||(24026381-24026515)
chr2 (391-473)||(35404334-35404416)
chr2 (177-278)||(37810300-37810401)
chr2 (99-204)||(41979389-41979494)
chr2 (99-187)||(33263459-33263547)
chr2 (381-476)||(379380-379474)
chr2 (391-498)||(18899943-18900050)
chr2 (357-499)||(28739927-28740069)
chr2 (378-473)||(32242208-32242303)
chr2 (391-473)||(13898480-13898562)
chr2 (391-473)||(14039097-14039179)
chr2 (368-473)||(33262857-33262962)
chr2 (391-473)||(38413469-38413551)
chr2 (389-473)||(33136069-33136153)
chr2 (382-473)||(1833712-1833803)
chr2 (381-487)||(3575280-3575385)
chr2 (391-473)||(3991777-3991859)
chr2 (381-499)||(6224235-6224352)
chr2 (381-499)||(28845012-28845129)
chr2 (428-505)||(214961-215038)
chr2 (391-476)||(11153365-11153450)
chr2 (169-242)||(15224641-15224714)
chr2 (170-279)||(28546289-28546398)
chr2 (145-245)||(37790329-37790427)
chr2 (381-473)||(18177724-18177815)
chr2 (98-157)||(18899243-18899302)
chr2 (392-495)||(25288594-25288697)
chr2 (143-202)||(30851383-30851442)
chr2 (391-515)||(40829596-40829722)
chr2 (1-68)||(44880468-44880534)
chr2 (381-499)||(7027330-7027447)
chr2 (144-206)||(13908631-13908693)
chr2 (391-473)||(19948542-19948624)
chr2 (381-467)||(26789244-26789329)
chr2 (381-473)||(13833077-13833168)
chr2 (152-206)||(35403978-35404033)
chr2 (1-71)||(4385113-4385182)
chr2 (99-137)||(13908713-13908751)
chr2 (144-242)||(18899302-18899399)
chr2 (381-475)||(24025850-24025943)
chr2 (391-473)||(41978841-41978923)
chr2 (99-152)||(12520314-12520367)
chr2 (400-473)||(12877690-12877763)
chr2 (150-187)||(15926689-15926726)
chr2 (412-473)||(30850272-30850333)
chr2 (395-499)||(31847237-31847342)
chr2 (391-472)||(37810898-37810979)
chr2 (1-73)||(4056570-4056641)
chr2 (177-233)||(38147429-38147485)
chr2 (166-233)||(2104286-2104353)
chr2 (394-461)||(18727665-18727732)
chr2 (99-157)||(35403912-35403970)
chr2 (231-277)||(37654841-37654887)
chr2 (395-449)||(45161152-45161206)
chr2 (101-138)||(18726919-18726956)
chr2 (391-432)||(43318776-43318817)
chr2 (1-73)||(2265553-2265624)
chr2 (1-73)||(6153071-6153142)
chr2 (142-186)||(13327675-13327719)
chr2 (1-73)||(13350686-13350757)
chr2 (1-73)||(18710840-18710911)
[»] chr8 (72 HSPs)
chr8 (99-313)||(35879938-35880152)
chr8 (99-312)||(24067375-24067587)
chr8 (98-279)||(18984939-18985120)
chr8 (99-273)||(8029166-8029340)
chr8 (99-245)||(42423848-42423994)
chr8 (99-266)||(41394485-41394652)
chr8 (103-279)||(24082798-24082972)
chr8 (100-279)||(12737396-12737576)
chr8 (377-497)||(17234694-17234814)
chr8 (111-245)||(12521731-12521864)
chr8 (99-244)||(3007131-3007277)
chr8 (145-279)||(6387259-6387393)
chr8 (377-473)||(24067110-24067206)
chr8 (377-473)||(37131287-37131383)
chr8 (391-505)||(6388140-6388254)
chr8 (391-516)||(8029855-8029980)
chr8 (370-497)||(35879666-35879786)
chr8 (160-278)||(33177262-33177380)
chr8 (144-273)||(27974323-27974452)
chr8 (144-273)||(28031592-28031721)
chr8 (144-232)||(26619984-26620072)
chr8 (381-516)||(10294996-10295130)
chr8 (397-499)||(12522528-12522630)
chr8 (100-191)||(44977438-44977529)
chr8 (144-273)||(27876447-27876579)
chr8 (144-273)||(28016628-28016760)
chr8 (381-499)||(31625735-31625852)
chr8 (361-516)||(26856515-26856670)
chr8 (103-238)||(4870482-4870617)
chr8 (391-498)||(19484194-19484301)
chr8 (377-499)||(7760786-7760908)
chr8 (381-499)||(9288151-9288268)
chr8 (403-505)||(32497962-32498064)
chr8 (144-228)||(27869131-27869215)
chr8 (389-476)||(16364156-16364243)
chr8 (381-476)||(27878640-27878734)
chr8 (381-476)||(28018821-28018915)
chr8 (230-312)||(7761067-7761148)
chr8 (381-499)||(18305633-18305750)
chr8 (99-157)||(19484915-19484973)
chr8 (381-499)||(19717531-19717648)
chr8 (391-476)||(28317086-28317171)
chr8 (393-473)||(1527921-1528001)
chr8 (357-472)||(44725423-44725538)
chr8 (381-516)||(42305261-42305395)
chr8 (144-202)||(7761198-7761256)
chr8 (1-59)||(38782503-38782561)
chr8 (391-476)||(27915593-27915678)
chr8 (391-476)||(27962012-27962097)
chr8 (259-312)||(37131077-37131130)
chr8 (381-473)||(33177853-33177944)
chr8 (381-473)||(43166333-43166424)
chr8 (99-138)||(6387200-6387239)
chr8 (394-473)||(41252168-41252247)
chr8 (381-467)||(14781789-14781874)
chr8 (381-499)||(18958384-18958501)
chr8 (381-499)||(39467175-39467292)
chr8 (381-499)||(43308165-43308282)
chr8 (400-505)||(24082184-24082289)
chr8 (1-73)||(16423493-16423564)
chr8 (166-242)||(19484818-19484893)
chr8 (227-270)||(17234979-17235022)
chr8 (440-473)||(12522485-12522518)
chr8 (98-139)||(26619926-26619967)
chr8 (1-58)||(37586630-37586687)
chr8 (428-473)||(41393960-41394005)
chr8 (103-139)||(7761274-7761310)
chr8 (1-73)||(17116143-17116214)
chr8 (9-73)||(39746036-39746099)
chr8 (41-98)||(40046271-40046330)
chr8 (1-73)||(44826802-44826873)
chr8 (1-73)||(45140872-45140943)
[»] chr6 (42 HSPs)
chr6 (98-278)||(16439301-16439481)
chr6 (119-312)||(28041962-28042152)
chr6 (99-244)||(31534419-31534564)
chr6 (99-279)||(31975066-31975246)
chr6 (97-273)||(24202718-24202894)
chr6 (391-499)||(31975666-31975774)
chr6 (392-499)||(3000218-3000325)
chr6 (99-278)||(2607540-2607719)
chr6 (390-473)||(13461377-13461460)
chr6 (394-499)||(16438684-16438789)
chr6 (391-498)||(1463685-1463792)
chr6 (391-498)||(6788079-6788186)
chr6 (391-498)||(10113794-10113901)
chr6 (391-473)||(21199558-21199640)
chr6 (391-473)||(31996262-31996344)
chr6 (99-242)||(6788985-6789141)
chr6 (378-473)||(8779583-8779677)
chr6 (153-272)||(28900199-28900317)
chr6 (391-485)||(2606887-2606981)
chr6 (381-499)||(14262094-14262211)
chr6 (392-473)||(7497550-7497631)
chr6 (100-219)||(32567610-32567734)
chr6 (402-465)||(28900863-28900926)
chr6 (99-157)||(1462728-1462786)
chr6 (99-157)||(10110658-10110716)
chr6 (381-499)||(31067858-31067975)
chr6 (391-473)||(31535074-31535156)
chr6 (144-206)||(31995709-31995771)
chr6 (381-516)||(31896046-31896180)
chr6 (103-157)||(3000979-3001033)
chr6 (381-473)||(34758737-34758828)
chr6 (381-499)||(4200109-4200226)
chr6 (381-499)||(30384722-30384839)
chr6 (400-473)||(7835387-7835460)
chr6 (166-230)||(1462808-1462872)
chr6 (1-73)||(15590561-15590633)
chr6 (103-137)||(7834997-7835031)
chr6 (391-473)||(12028979-12029061)
chr6 (103-137)||(31995655-31995689)
chr6 (1-73)||(559004-559075)
chr6 (1-73)||(12432077-12432148)
chr6 (1-73)||(31099429-31099500)
[»] scaffold0024 (1 HSPs)
scaffold0024 (99-273)||(136137-136311)
[»] scaffold0116 (1 HSPs)
scaffold0116 (104-237)||(4906-5041)
[»] scaffold0246 (3 HSPs)
scaffold0246 (99-206)||(25002-25109)
scaffold0246 (99-137)||(1987-2025)
scaffold0246 (394-473)||(1371-1450)
[»] scaffold0543 (1 HSPs)
scaffold0543 (381-499)||(10951-11068)
[»] scaffold0110 (1 HSPs)
scaffold0110 (390-499)||(39301-39410)
[»] scaffold1128 (1 HSPs)
scaffold1128 (391-499)||(919-1027)
[»] scaffold0002 (2 HSPs)
scaffold0002 (98-242)||(16136-16293)
scaffold0002 (1-73)||(431929-432000)
[»] scaffold1504 (1 HSPs)
scaffold1504 (381-516)||(1276-1410)
[»] scaffold0573 (2 HSPs)
scaffold0573 (153-272)||(9477-9595)
scaffold0573 (402-465)||(8868-8931)
[»] scaffold0013 (2 HSPs)
scaffold0013 (392-516)||(89241-89365)
scaffold0013 (196-245)||(89927-89976)
[»] scaffold0042 (1 HSPs)
scaffold0042 (392-499)||(57732-57839)
[»] scaffold0421 (1 HSPs)
scaffold0421 (391-449)||(1727-1785)
[»] scaffold1678 (1 HSPs)
scaffold1678 (98-151)||(1430-1483)
[»] scaffold0347 (1 HSPs)
scaffold0347 (390-455)||(15132-15197)
[»] scaffold0037 (1 HSPs)
scaffold0037 (100-157)||(36903-36960)
[»] scaffold0383 (1 HSPs)
scaffold0383 (381-449)||(16687-16754)
[»] scaffold0197 (1 HSPs)
scaffold0197 (1-73)||(27670-27741)
[»] scaffold0152 (2 HSPs)
scaffold0152 (381-449)||(20923-20990)
scaffold0152 (381-449)||(28811-28878)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-73)||(11835-11906)


Alignment Details
Target: chr1 (Bit Score: 472; Significance: 0; HSPs: 113)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 1 - 621
Target Start/End: Original strand, 27257472 - 27258111
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagcttagtcatcggtcagcagctataagcca 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27257472 tttatgtcattttacatttatcaattagttaaaccgttttattttaccaaacacttcaattagtttataaacttagtcatcggtcagcagctataagcca 27257571  T
Q  101 aggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatt 200  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27257572 aggttttacaactcgagagtttacctcaactcgttttatccaagtaaactcgactcgagaactcttacgagtttacctaaaattaaaattaaattaaatt 27257671  T
Q  201 tattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataaaa 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27257672 tattatttacatgacatatctaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattagaaaggttatcaaccaccgtaataaaa 27257771  T
Q  301 cattatgttcaatcaaagttgttaataaaactnnnnnnnnnnnnttagacttacatttcgatttactcgagtttacccgag----------ttaactcta 390  Q
    ||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||          |||||||||    
T  27257772 cattatgttcaatcaaagttgttaataaaactaaaaaaaaaaaattagacttacatttcgatttactcgagtttacccgagtttgaccgaattaactcta 27257871  T
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27257872 gtcaaactcgtcaaacattccgattttaccgaaaatcaagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 27257971  T
Q  491 gttaacactaaatttatgaaacattgttataagtt-------atcgaccatcaattataaactatgcacgcttatgagttatccactatttttacca--a 581  Q
    |||||||||| |||||| |||||||||||||||||       |||  |||| ||||||||||||||||||||||||||||||||||||||||||| |  |    
T  27257972 gttaacactagatttataaaacattgttataagttatcagtcatcagccattaattataaactatgcacgcttatgagttatccactatttttacaaaga 27258071  T
Q  582 agtctaaaacccaatttaaaacggtcacgtctttatctct 621  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27258072 agtctaaaacccaatttaaaacggtcacgtctttatctct 27258111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 103 - 299
Target Start/End: Original strand, 49971007 - 49971203
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    |||||| |||||||||||||||||||| | ||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||    
T  49971007 gttttataactcgagagtttacctcaatttgttttgctcaggtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattaaataaagttta 49971106  T
Q  203 ttatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataaa 299  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  49971107 ttatttacatgacatatgtaaactaatatagtattgtaaatagtcgaatagtacaaaatatgactaaattataaaggttttcaaccaccataataaa 49971203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 99 - 313
Target Start/End: Complemental strand, 52182808 - 52182595
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||  ||||||||||  |||||||||||||| || |||    
T  52182808 caagattttacgactcgagagtttatctcaactcgttttgtccaggtaaactcgattcgagaacttgtacgagtttatttaaaattaaaattaaataaaa 52182709  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataa 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   |||||||| ||||||||||||||| ||||||| | ||||||    
T  52182708 tttattatttacatgacatatgtaaactaatataatattgtaaatagtctaatagt-gcaaatatgattaaattataaaggttttcaaccatcataataa 52182610  T
Q  299 aacattatgttcaat 313  Q
    |||||||| ||||||    
T  52182609 aacattatattcaat 52182595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 99 - 244
Target Start/End: Original strand, 47370882 - 47371026
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| || |||    
T  47370882 caaggttttgcaactcgagagtttacctcaactcgttttgcctaggtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaaa 47370981  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    |||||||| | |||||||||| | |  |||||||||||||||||||    
T  47370982 tttattatatgcatgacatatat-agttaatataatattgtaaata 47371026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 104 - 278
Target Start/End: Original strand, 42303712 - 42303888
Alignment:
Q  104 ttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttat 203  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||| || || |||||||||||||||||||| || ||||||||    
T  42303712 ttttacaactcaagagtttacctcaactcgttttgtttaggtaaattcgactcgagaactcgtatgactttacctaaaattaaaattatataaaatttat 42303811  T
Q  204 tattta--catgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaag 278  Q
    ||| ||  ||||||||||||||  ||||||||||||||||||||   ||||||  ||||||||||| ||||| ||||    
T  42303812 tatatatgcatgacatatgtaagttaatataatattgtaaataggtcaatagtgcaaaatatgacttaattacaaag 42303888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 345 - 513
Target Start/End: Complemental strand, 52182480 - 52182311
Alignment:
Q  345 ttagacttacatttcgattt-actcgagtttacccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagt 443  Q
    ||||||||||||| | |||| |||||||||||||| ||||||||| |||| ||||||||||||||| ||||||||||  ||||||| |||||||| || |    
T  52182480 ttagacttacattcctattttactcgagtttaccctagttaactcgagtcgaactcgtcaaacatttcgattttaccagaaatcgaatttacctccgaat 52182381  T
Q  444 tgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacactaaatttatgaaaca 513  Q
    |||||||||||  ||||||||||||||||| ||  |||||||||||||||||||||  |||| |||||||    
T  52182380 tgacacgatttcagtacctaaaaacgtaaactcgataaactcggcgagttaacactcgatttgtgaaaca 52182311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 99 - 279
Target Start/End: Original strand, 48965829 - 48966008
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||||| |||||||||||| |||||| |  ||||||||| |||||||||||| |||||||| ||||||||||||||||| || |||    
T  48965829 caaggttttgcaactcgagaatttacctcaacttgttttgccttggtaaactcaactcgagaactcctacgagttaacctaaaattaaaattatataaaa 48965928  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg 279  Q
    ||||  || | || |||||||||||||||||||||||||||||||||   ||||||  ||||||||||| ||||| |||||    
T  48965929 ttta-catatgcaagacatatgtaaactaatataatattgtaaatagatcaatagtgcaaaatatgacttaattacaaagg 48966008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 99 - 244
Target Start/End: Complemental strand, 25254329 - 25254185
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||| ||||||||||||  | ||||||||||||||||||||||  ||||||||||||| |||||||||||| || |||    
T  25254329 caaggttttacaactcgagagtttacttcaactcgttttacctaggtaaactcgactcgagaacttgtacgagtttacct-aaattaaaattatataaaa 25254231  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    |||||||| | |||||||||| ||| || |||||||| ||||||||    
T  25254230 tttattatatgcatgacatatataagctgatataatactgtaaata 25254185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 49236318 - 49236435
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    ||||| ||||||||||| ||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||| |||||||||||||| || ||    
T  49236318 ccaagattttacaactcaagagtttacctcaactcgttttgcctaggtaaactcgactcgaaaactcgtacgagtttacataaaattaaaattatataaa 49236417  T
Q  198 atttattatttacatgac 215  Q
    |||||||||  |||||||    
T  49236418 atttattatacacatgac 49236435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 15928368 - 15928237
Alignment:
Q  111 actcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttac 210  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||| ||| | |    
T  15928368 actcgggagtttacctcaactcgttttgcctaggtaaactcgactcgagaactcgtacgagtttacctaaaattagaattatataaaatttaatatatgc 15928269  T
Q  211 atgacatatgtaaactaatataatattgtaaa 242  Q
    | |||||||  || ||||||||||||| ||||    
T  15928268 aagacatatacaagctaatataatattctaaa 15928237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 144 - 278
Target Start/End: Original strand, 49452417 - 49452551
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| | || ||||||| |||  ||||||||||||||||||    
T  49452417 gtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaaatttattatatgcaggacatatataagttaatataatattgtaaat 49452516  T
Q  244 agtcaaatagtataaaatatgactaaattataaag 278  Q
    ||   ||||||  ||||||||||| ||||| ||||    
T  49452517 aggtcaatagtgcaaaatatgacttaattacaaag 49452551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 362 - 473
Target Start/End: Original strand, 49971580 - 49971692
Alignment:
Q  362 tttactcgagtttacccgagttaactctagtcaaactcgtcaa-acattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtac 460  Q
    ||||| |||||||  |||||||||||| ||||||||||||||| ||||| ||||||||||  ||| |||||||||||| |||||||||||||||||||||    
T  49971580 tttacccgagtttgaccgagttaactcgagtcaaactcgtcaacacatttcgattttaccagaaaacgagtttacctccgagttgacacgattttggtac 49971679  T
Q  461 ctaaaaacgtaaa 473  Q
    |||||||||||||    
T  49971680 ctaaaaacgtaaa 49971692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 103 - 278
Target Start/End: Original strand, 42637479 - 42637653
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    |||||||||||| |||||||| ||||||||||| |  | | |||||||||| | |  ||||| || ||||||||||||||||||||||| || |||||||    
T  42637479 gttttacaactcaagagtttatctcaactcgttatacctatgtaaactcgaattgtaaactcgtatgagtttacctaaaattaaaattatat-aaattta 42637577  T
Q  203 ttatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaag 278  Q
    |||| |||||||||||| ||| |||||||||||||  ||||||   ||||||||||||||| |||  |||||||||    
T  42637578 ttatatacatgacatatataagctaatataatattacaaataggtcaatagtataaaatataacttgattataaag 42637653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 2292591 - 2292672
Alignment:
Q  110 aactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaatta 191  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  2292591 aactcgagagtttacctcaactcattttgtctaggtaaactcgactcgggaactcgtacgagtttacctaaaattaaaatta 2292672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 8148110 - 8147975
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||||||||||| |||  ||||| ||||||||||||||||||| |||||  ||  ||    
T  8148110 caaggttttgcaactcgagagtttacctcaactcgttttagctaggtaaactcgaatcgtaaactcgtacgagtttacctaaaattgaaattttatacaa 8148011  T
Q  199 tttattatttacatgacatatgtaaactaatataata 235  Q
    |||||||| | ||| |||||||||| |||||||||||    
T  8148010 tttattatatgcat-acatatgtaagctaatataata 8147975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 99 - 231
Target Start/End: Original strand, 34750991 - 34751123
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||||||| |||  ||||| ||||| |||||||||||||||||||| || |||    
T  34750991 caaggttttacaactcgagagtttacctcaactcgttttagcaatgtaaactcgaatcgtaaactcgtacgaatttacctaaaattaaaattatataaaa 34751090  T
Q  199 tttattatttacatgacatatgtaaactaatat 231  Q
    |||||| | || ||  ||||||||| |||||||    
T  34751091 tttattttatatatagcatatgtaagctaatat 34751123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 381 - 505
Target Start/End: Original strand, 5494753 - 5494876
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||| |||||| ||| |||||||||  ||| |||||||||||| ||||| |||||||||||||||||||||||||||| ||  ||    
T  5494753 gttaactc-agtcaaactcatcaaaccttctgattttaccagaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggta 5494851  T
Q  481 aactcggcgagttaacactaaattt 505  Q
    | ||||| ||||||||||| |||||    
T  5494852 atctcggagagttaacactcaattt 5494876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 99 - 234
Target Start/End: Original strand, 11578454 - 11578588
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||||||||||| |||  ||||| ||||||||||||||||||| |||||  ||  ||    
T  11578454 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgaatcgtaaactcgtacgagtttacctaaaattgaaattttatacaa 11578553  T
Q  199 tttattatttacatgacatatgtaaactaatataat 234  Q
    |||||||| | ||| ||||||| || ||||||||||    
T  11578554 tttattatatgcat-acatatggaagctaatataat 11578588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 45273110 - 45272993
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| ||||||||||||||||| |||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||| ||  ||    
T  45273110 gttaactc-agtcaaactcgtcaaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcgata 45273012  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  45273011 atctcggagagttaacact 45272993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 98 - 222
Target Start/End: Complemental strand, 43855189 - 43855065
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    ||||| ||||||||||||||||||||| ||||||||||||  |    ||||||||||||   ||||| |||||||||||||||||||||||||| || ||    
T  43855189 ccaagattttacaactcgagagtttacgtcaactcgttttaccttattaaactcgactcataaactcgtacgagtttacctaaaattaaaattatataaa 43855090  T
Q  198 atttattatttacatgacatatgta 222  Q
    ||||||  | |||||||||||||||    
T  43855089 atttatagtatacatgacatatgta 43855065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 34019760 - 34019653
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||  ||||  | | ||||||| || |||  ||||| |||||||||||||||||||||||||| || |||    
T  34019760 caaggttttacaactcgagagtttacctcaacttattttagctatgtaaacttgaatcgtaaactcgtacgagtttacctaaaattaaaattatataaaa 34019661  T
Q  199 tttattat 206  Q
    ||||||||    
T  34019660 tttattat 34019653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 51903633 - 51903534
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    |||||||| || |||||||||||||||||||||||| | |||||| |||||||||||||||| ||||||||||| |||| |||||| || || |||||||    
T  51903633 gttttacatcttgagagtttacctcaactcgttttgcctaggtaagctcgactcgagaactcgtacgagtttacttaaatttaaaaatatataaaattta 51903534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 15834689 - 15834806
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| |||||||| |||||||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  15834689 gttaactc-agtcaaactcgttaaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggta 15834787  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  15834788 atctcggagagttaacact 15834806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 99 - 234
Target Start/End: Original strand, 1242637 - 1242769
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||||||||||||||||||||||||  | || ||||||||| |||  ||||| ||||||||||||||| |||||||||  ||  ||    
T  1242637 caaggttttgcaactcgagagtttacctcaactcgttttacctagataaactcgaatcgtaaactcgtacgagtttacctaagattaaaattttatacaa 1242736  T
Q  199 tttattatttacatgacatatgtaaactaatataat 234  Q
    |||||||| | |||   |||||||| ||||||||||    
T  1242737 tttattatatgcat---atatgtaagctaatataat 1242769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 99 - 243
Target Start/End: Complemental strand, 3594038 - 3593881
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactc-------------gagaactcttacgagtttacctaaaatta 185  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||             ||||| || |||||| ||| |||||||||    
T  3594038 caaggttttacaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaacttgacttgagaattcgtacgagattatctaaaatta 3593939  T
Q  186 aaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    |||||| || ||| ||||||| | |||||||||| ||| |||| ||||||||||||||    
T  3593938 aaattatataaaaattattatatgcatgacatatataagctaaaataatattgtaaat 3593881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 391 - 516
Target Start/End: Original strand, 47371589 - 47371714
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||| ||||| |||||||||||||  |||||||||||||||| ||||| |||||||||||||||||||  ||||||| ||  ||||||| | |     
T  47371589 gtcaaactcggcaaaccttccgattttaccagaaatcgagtttacctccgagttaacacgattttggtacctaagtacgtaaactcgataaactcagagt 47371688  T
Q  491 gttaacactaaatttatgaaacattg 516  Q
    |||||||||  ||||  |||||||||    
T  47371689 gttaacactcgatttgcgaaacattg 47371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 160 - 278
Target Start/End: Original strand, 28403322 - 28403441
Alignment:
Q  160 aactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaa-tataatattgtaaata-gtcaaatagtata 257  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||| | |||||||||| ||| |||| |||||||||||||||| ||| ||||||  |    
T  28403322 aactcgtacgagtttacctaaaattaaaattatataaaatttattatatgcatgacatatataagctaattataatattgtaaatatgtc-aatagtgca 28403420  T
Q  258 aaatatgactaaattataaag 278  Q
    |||||||||| ||||| ||||    
T  28403421 aaatatgacttaattacaaag 28403441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 4005174 - 4005067
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  4005174 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 4005075  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  4005074 gttgacac 4005067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 19863623 - 19863513
Alignment:
Q  155 tcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagt 254  Q
    |||||||||| |||||||||| ||||||||||||||| || ||||| ||||| | |||||||||  ||| |||||||||||||||||||||   ||||||    
T  19863623 tcgagaactcgtacgagtttaactaaaattaaaattatataaaatt-attatatgcatgacatacataagctaatataatattgtaaatagatcaatagt 19863525  T
Q  255 ataaaatatgac 266  Q
     |||||||||||    
T  19863524 gtaaaatatgac 19863513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 3583573 - 3583678
Alignment:
Q  394 aaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagtt 493  Q
    ||||||||||||| ||||||||||||   ||| ||||||||| ||  |||| ||||||||| |||||||||||||||||| ||  ||||||||| |||||    
T  3583573 aaactcgtcaaactttccgattttactagaaaccgagtttacttctaagttaacacgatttcggtacctaaaaacgtaaactcggtaaactcggagagtt 3583672  T
Q  494 aacact 499  Q
    ||||||    
T  3583673 aacact 3583678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 391 - 496
Target Start/End: Original strand, 48966505 - 48966610
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||| |||| | |  ||||| |||||||||| ||||| |||||||||||||||||||| ||||||| ||| ||||||||  ||    
T  48966505 gtcaaactcgtcaaaccttccaatttcatcagaaatcaagtttacctcagagttaacacgattttggtacctaaacacgtaaactcagtaaactcgaaga 48966604  T
Q  491 gttaac 496  Q
    ||||||    
T  48966605 gttaac 48966610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 50038026 - 50038103
Alignment:
Q  160 aactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatatt 237  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||| |||||||||||||||| ||  |||||||||    
T  50038026 aactcttacaagtttacctaaaattaaaattatataaaatttattatatacatgacatatgtaagctggtataatatt 50038103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 3583311 - 3583391
Alignment:
Q  104 ttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaatt 184  Q
    ||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||| || |||||||  |||||||    
T  3583311 ttttacaactcgagagtttacctcaactcattttgcttaggtaaactcgactcgagaactcgtaagagtttatataaaatt 3583391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 4006128 - 4005972
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactct-------------tacgagtttacctaaaatta 185  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||  |||||              |||||||||||||||||||     
T  4006128 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaattg 4006029  T
Q  186 aaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||  ||  |||||||||| | |||||||||||||| ||||||||||| ||||||    
T  4006028 aaattttatacaatttattatatgcatgacatatgtaagctaatataatactgtaaa 4005972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 5208613 - 5208769
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgac-------------tcgagaactcttacgagtttacctaaaatta 185  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||||             |||  ||||| |||||||||||||||||||     
T  5208613 caaggttttacaactcgagagtttacctcaactcgttttacctaggtaaactcgactggtaaactcgaatcgtaaactcgtacgagtttacctaaaattg 5208712  T
Q  186 aaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||  ||  |||||||||| | |||||||||| ||| |||||||||||| |||||    
T  5208713 aaattttatacaatttattatgtgcatgacatatataagctaatataatatcgtaaa 5208769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 148 - 279
Target Start/End: Original strand, 32759440 - 32759572
Alignment:
Q  148 actcgactcgagaactcttacgagtttacctaaaattaaaattac-attaaatttattatttacatgacatatgtaaactaatataatattgtaaatagt 246  Q
    |||||||||||||| || ||||| |||||||||||| |||||||  || ||||||||||| | || || |||| ||| |||||||||||| ||||||||     
T  32759440 actcgactcgagaattcgtacgaatttacctaaaataaaaattaatataaaatttattatatgcaagatatatataagctaatataatatcgtaaatagg 32759539  T
Q  247 caaatagtataaaatatgactaaattataaagg 279  Q
      ||||||| ||||||||||| ||||| |||||    
T  32759540 tcaatagtacaaaatatgacttaattacaaagg 32759572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 391 - 475
Target Start/End: Original strand, 35177224 - 35177308
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaatt 475  Q
    |||||||||||||| | ||||||||||| |  |||||||||||||||| || || ||||||||||||||||||||||| ||||||    
T  35177224 gtcaaactcgtcaatccttccgattttatcagaaatcgagtttacctctgaattaacacgattttggtacctaaaaacataaatt 35177308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 498
Target Start/End: Original strand, 1243320 - 1243427
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| |   |||||||| |||    
T  1243320 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactaggtaaactcgccga 1243419  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  1243420 gttgacac 1243427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 9192131 - 9192024
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| ||| |||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  9192131 gtcaaactcgtcaaactttctgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 9192032  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  9192031 gttgacac 9192024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 26757722 - 26757615
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| ||||| || || |||| | ||||||| ||||||| ||  |||||||| |||    
T  26757722 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctctgagttaactcgtttttagcacctaaacacgtaaactcggtaaactcgccga 26757623  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  26757622 gttgacac 26757615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 35193746 - 35193656
Alignment:
Q  224 actaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg--ttatcaaccaccgtaataaaacattatgttcaa 312  Q
    |||||||||||||||||||||||  ||||||  |||||||||||||||||||||||  || ||||||||| |||||||||| | |||||||    
T  35193746 actaatataatattgtaaatagtttaatagtgcaaaatatgactaaattataaaggttttctcaaccaccataataaaacaatttgttcaa 35193656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 41353528 - 41353421
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| || |||| ||  |||||||| |||    
T  41353528 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcggtaaactcgccga 41353429  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  41353428 gttgacac 41353421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 392 - 499
Target Start/End: Complemental strand, 46328519 - 46328412
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgag 491  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||| ||||| |||||||||| ||||||||||||||||| ||  ||| ||||| ||     
T  46328519 tcaaactcgttaaaccttccgattttaacagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagaa 46328420  T
Q  492 ttaacact 499  Q
    ||||||||    
T  46328419 ttaacact 46328412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 51106999 - 51106892
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  ||||||||||| |||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  51106999 gtcaaactcgtcaaactttccgattttaccagaaatcgagttttcctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 51106900  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  51106899 gttgacac 51106892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 7798607 - 7798525
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| |||| |||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  7798607 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 7798525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 8140888 - 8141005
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||| | |||| |||  ||||||||  ||||||| |||||||| ||||| |||||||||| ||||||||||||||||| ||  ||    
T  8140888 gttaactc-agtcaaactcattaaaccttctaattttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgata 8140986  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  8140987 atctcggagagttaacact 8141005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 392 - 473
Target Start/End: Original strand, 5209383 - 5209464
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||||||| ||| ||||| |||  |||||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  5209383 tcaaactcgtcaaactttctgatttcaccagaaatcgagttgacctccgagttaacacgattttggtacctaaacacgtaaa 5209464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 35193822 - 35193745
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttac 176  Q
    |||| ||||||||||||||||||||| |||| |||||||||  || |||| ||||||||||||||| |||||||||||    
T  35193822 caagattttacaactcgagagtttacttcaattcgttttgtttagataaattcgactcgagaactcgtacgagtttac 35193745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 1108468 - 1108377
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| ||||||||||||||||| ||||||||| ||| |||| |||||||||||| ||||| ||||| ||||   |||||||||||||||    
T  1108468 gttaactc-agtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttaccacctaaaaacgtaaa 1108377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 9174651 - 9174495
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg-------------agaactcttacgagtttacctaaaatta 185  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||               |||||  ||||||||||||||||||     
T  9174651 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcataaactcgcacgagtttacctaaaattg 9174552  T
Q  186 aaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||  ||  |||||||||| | |||||||||||||| ||||||||||| ||||||    
T  9174551 aaattttatacaatttattatatgcatgacatatgtaagctaatataatactgtaaa 9174495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 381 - 516
Target Start/End: Original strand, 48177097 - 48177232
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttacc-gaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatt 479  Q
    |||||||| |||||||||||| |||| |||| |||||||| ||||| ||| |||||||| ||||| ||||||||||  |||||||||||||||| ||| |    
T  48177097 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaaccgattttacctcagagttaacacgatttttctacctaaaaacgtaaactcagt 48177195  T
Q  480 aaactcggcgagttaacactaaatttatgaaacattg 516  Q
    || ||| | ||||||| |||  ||||  |||||||||    
T  48177196 aatctcagagagttaatactcgatttgcgaaacattg 48177232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 473
Target Start/End: Complemental strand, 49231543 - 49231459
Alignment:
Q  389 tagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||||| |||| |||||||| ||||  ||| |||||||||||| ||||| |||||||||| |||||||||||| ||||    
T  49231543 tagtcaaactcgttaaaccttccgattataccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacataaa 49231459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 33886874 - 33886953
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgt 470  Q
    |||||||||||||||| ||||||||| ||| |||| |||||||||||| ||||| ||||| |||||  ||||||||||||    
T  33886874 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgt 33886953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 391 - 470
Target Start/End: Complemental strand, 33957376 - 33957297
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgt 470  Q
    |||||||||||||||| ||||||||| ||| |||| |||||||||||| ||||| ||||| |||||  ||||||||||||    
T  33957376 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgt 33957297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 6313119 - 6313002
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  6313119 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 6313021  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  6313020 atctcggagatttaacact 6313002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 18246882 - 18246940
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||    
T  18246882 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 18246940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 25612635 - 25612518
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  25612635 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 25612537  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  25612536 atctcggagatttaacact 25612518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 29396089 - 29396206
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  29396089 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 29396187  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  29396188 atctcggagatttaacact 29396206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 32760113 - 32760195
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||| || | | ||||||||||   ||| |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  32760113 gtcaaactcgttaagcctcccgattttactagaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaa 32760195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 41354201 - 41354143
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||    
T  41354201 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 41354143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 51107963 - 51107905
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||    
T  51107963 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 51107905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 486
Target Start/End: Complemental strand, 8147424 - 8147329
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcg 486  Q
    |||||||||||||||| || | ||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  ||||||||    
T  8147424 gtcaaactcgtcaaactttgcaattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcg 8147329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 33886366 - 33886437
Alignment:
Q  160 aactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||| || ||  ||||||||| |||||||    
T  33886366 aactcgtacgagtttacctaaaattaaaattatataaaatttattatatatatagcatatgtaagctaatat 33886437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 33957886 - 33957815
Alignment:
Q  160 aactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||| || ||  ||||||||| |||||||    
T  33957886 aactcgtacgagtttacctaaaattaaaattatataaaatttattatatatatagcatatgtaagctaatat 33957815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 7799201 - 7799163
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7799201 caaggttttacaactcgagagtttacctcaactcgtttt 7799163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 11579114 - 11579196
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| |||||||||||||  ||||| | |||||||| ||||| ||||| |||| | ||||||| |||||||    
T  11579114 gtcaaactcgtcaaactttccgattttaccagaaatcaaatttacctccgagttaacacgtttttagcacctaaacacgtaaa 11579196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 25253609 - 25253492
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| ||||||||||||||||  |||||| ||||||  ||| ||| |||||||| |  || ||||||||||||||||||||||| |||| ||  ||    
T  25253609 gttaactc-agtcaaactcgtcaaatcttccgagtttaccagaaaccgaatttacctcagtattaacacgattttggtacctaaaaacataaactcggta 25253511  T
Q  481 aactcggcgagttaacact 499  Q
    ||||| | || ||||||||    
T  25253510 aactcagagaattaacact 25253492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 26758371 - 26758317
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcg 152  Q
    |||||||||| |||||||||||||||||||||||||||||  | |||||||||||    
T  26758371 ccaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcg 26758317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 226596 - 226499
Alignment:
Q  179 aaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataa 276  Q
    |||||| |||||| || ||||||||||| ||| |||||||| ||| |||||||||||||| ||||||   ||||||  |||||||||||  |||||||    
T  226596 aaaatttaaattatataaaatttattatatacgtgacatatataagctaatataatattgcaaataggtcaatagtgcaaaatatgacttgattataa 226499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 9322181 - 9322297
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacact 499  Q
    ||||||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||| ||||| || ||||||||    
T  9322181 gtcaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacact 9322280  T
Q  500 aaatttatgaaacattg 516  Q
      ||||| | |||||||    
T  9322281 cgatttacggaacattg 9322297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 465
Target Start/End: Complemental strand, 15927415 - 15927332
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaa 465  Q
    |||||||| ||||||||||||||||| ||||||||||| |  ||| ||| |||||||| ||||| |||| |||||||||| ||||    
T  15927415 gttaactc-agtcaaactcgtcaaactttccgattttatcagaaaccgaatttacctcagagttaacacaattttggtacttaaa 15927332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 18798995 - 18798904
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| |||||| ||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| |||||    
T  18798995 gttaactc-agtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaa 18798904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 28403960 - 28404068
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||| |||||||||||| ||||||||    ||| ||| |||||||   |||| |||||||||||||||||||||| ||||| ||| |||| |||  ||    
T  28403960 gtcaaattcgtcaaacatttcgattttattagaaaccgaatttaccttcaagttaacacgattttggtacctaaaaatgtaaactcagtaaattcgaaga 28404059  T
Q  491 gttaacact 499  Q
    |||||||||    
T  28404060 gttaacact 28404068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 516
Target Start/End: Original strand, 25830904 - 25831038
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||     || ||| |||| ||| ||||| |||||||||| ||||||||||||||||| ||  ||    
T  25830904 gttaactc-agtcaaactcgttaaaccttccaattttattaggaaccgattttatctcagagttaacacgatttttgtacctaaaaacgtaaactcggta 25831002  T
Q  481 aactcggcgagttaacactaaatttatgaaacattg 516  Q
    | ||||| |||||||||||  |||| || |||||||    
T  25831003 atctcggagagttaacactcgatttgtggaacattg 25831038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 35176657 - 35176732
Alignment:
Q  169 gagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    ||||||||||||||||||||| |    |||||||| || | |||||||||| ||| ||||||||||||||||||||    
T  35176657 gagtttacctaaaattaaaatgatccaaaatttatgatatgcatgacatatataagctaatataatattgtaaata 35176732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 33886292 - 33886330
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  33886292 caaggttttacaactcgagagtttatctcaactcgtttt 33886330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 33957960 - 33957922
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  33957960 caaggttttacaactcgagagtttatctcaactcgtttt 33957922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 275
Target Start/End: Original strand, 40431784 - 40431894
Alignment:
Q  166 tacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat-aatattgtaaatagtcaaatagtataaaatatg 264  Q
    |||||||||| ||||||||||||||| || ||||||||||| ||| || ||||| |||| |||| | |||||| |||||||   ||||||  |||||||     
T  40431784 tacgagtttatctaaaattaaaattatatcaaatttattatatacgtggcatatataaaataatctaaatattataaataggtcaatagtgcaaaatatt 40431883  T
Q  265 actaaattata 275  Q
    ||| |||||||    
T  40431884 actcaattata 40431894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 394 - 467
Target Start/End: Complemental strand, 3593350 - 3593277
Alignment:
Q  394 aaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaa 467  Q
    ||||| ||||||| |||||||||||    ||||||| |||||||| ||||| ||||||||||| ||||||||||    
T  3593350 aaacttgtcaaaccttccgattttattagaaatcgaatttacctccgagttaacacgattttgatacctaaaaa 3593277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 18954563 - 18954490
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||| ||||||||| ||| |||| ||||||||| || ||||| ||||| |||||  |||||||||||||||    
T  18954563 gtcaaactttccgatttcaccaaaaaccgagtttacgtccgagttaacacgtttttgccacctaaaaacgtaaa 18954490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 49453074 - 49453183
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacga-ttttggtacctaaaaacgtaaattcattaaactcggcg 489  Q
    |||||||| ||||||| ||  |||||| ||  |||||||||||||||| ||||| |||||| |||||||||||||| || |||| |   |||||||||      
T  49453074 gtcaaacttgtcaaaccttatgatttttccagaaatcgagtttacctcagagttaacacgatttttggtacctaaacacataaactaggtaaactcggac 49453173  T
Q  490 agttaacact 499  Q
    ||||||||||    
T  49453174 agttaacact 49453183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7710420 - 7710349
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||||||| ||||||| ||||||||| |||| |||| ||||    
T  7710420 tttatgtcattttacatttatcagctagttgaaccgtttt-ttttaccaaacacttcagttagcttatcagct 7710349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 38535801 - 38535892
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| |||||||||||| ||   |||||||||||||  ||| | |||||||||| ||||| |||| ||||| ||| |||||||||||||    
T  38535801 gttaactc-agtcaaactcgttaagtcttccgattttaccagaaacccagtttacctcagagttaacacaatttttgtaactaaaaacgtaaa 38535892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 38558019 - 38558110
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| |||||||||||| ||   |||||||||||||  ||| | |||||||||| ||||| |||| ||||| ||| |||||||||||||    
T  38558019 gttaactc-agtcaaactcgttaagtcttccgattttaccagaaacccagtttacctcagagttaacacaatttttgtaactaaaaacgtaaa 38558110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 41150691 - 41150620
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||   ||||||||||||| | ||||||| |||||||||||||| |||| ||||    
T  41150691 tttatgtcattttacatttatcggctagttaaaccgttat-ttttaccaaacacttcaattagcttatcagct 41150620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 41354121 - 41354046
Alignment:
Q  166 tacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    ||||||||||||||||||| |||||  ||  |||||||||| | ||| |||||||||| ||||||||||| ||||||    
T  41354121 tacgagtttacctaaaattgaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 41354046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 242
Target Start/End: Original strand, 18246963 - 18247038
Alignment:
Q  167 acgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||| ||||||||||||| |||||  ||  |||||||||| | |||||||||| ||| ||||||||||| ||||||    
T  18246963 acgaatttacctaaaattgaaattttatacaatttattatatgcatgacatatataagctaatataatactgtaaa 18247038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 30176958 - 30176888
Alignment:
Q  160 aactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    ||||| ||||||||||||||||||| |||||| |  ||||||||||| || || |||||||||| |||||||    
T  30176958 aactcgtacgagtttacctaaaatt-aaattataaaaaatttattatatatataacatatgtaagctaatat 30176888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 30177033 - 30176994
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  30177033 ccaaggttttacaattcgagaatttacctcaactcgtttt 30176994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 486
Target Start/End: Original strand, 49236980 - 49237075
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcg 486  Q
    |||||||||||||||| || ||||||||||  ||| |||| ||| ||| || || ||||| |||||||||||||| || |||| ||  ||||||||    
T  49236980 gtcaaactcgtcaaacctttcgattttaccagaaaccgagcttaactccgaattaacacggttttggtacctaaacacataaactcgataaactcg 49237075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 1109067 - 1109029
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  1109067 caaggttttacaattcgagagtttatctcaactcgtttt 1109029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 34751586 - 34751668
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| | ||||| ||||||||| ||| |||| |||||||||||| ||||| ||||| |||||  |  ||||||||||||    
T  34751586 gtcaaacttggcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccatttaaaaacgtaaa 34751668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 51107877 - 51107807
Alignment:
Q  172 tttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    ||||||||||||| |||||  ||  |||||||||| | |||||||||| ||| ||||||||||| ||||||    
T  51107877 tttacctaaaattgaaattttatacaatttattatatgcatgacatatataagctaatataatactgtaaa 51107807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 51702138 - 51702021
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| ||   ||||||||  ||| ||| |||||||| ||||| |||| ||||| ||||||||||| ||||| ||  ||    
T  51702138 gttaactc-agtcaaactcgttaaaccttttaattttaccagaaaccgattttacctcagagttaacacaatttttgtacctaaaaatgtaaactcgata 51702040  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  51702039 atctcggagatttaacact 51702021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 473
Target Start/End: Original strand, 21248490 - 21248571
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||||||| |||| | | |||| | | ||||| ||  |||| |||||||||||  |||||||||||||||    
T  21248490 tcaaactcgtcaaacattccaatttcaacaaaaaaccattttacttccaagttaacacgattttgacacctaaaaacgtaaa 21248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 32759382 - 32759419
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtc 140  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  32759382 gttttataactcgagaatttacctcaactcgttttgtc 32759419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 49452359 - 49452396
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttt 136  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  49452359 caaggttttgcaactcgagagtttatctcaactcgttt 49452396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 323536 - 323607
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||||| | ||||||| ||||||||| |||| |||| ||||    
T  323536 tttatgtcattttacatttatcagctagttgaaccgttat-ttttaccaaacacttcagttagcttatcagct 323607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1507200 - 1507129
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| |||||||||||||| |||| ||||    
T  1507200 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcaattagcttatcagct 1507129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2022788 - 2022717
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||||||||||||||||| | ||||||  ||||  | |||||||| |||||||||||||| |||| ||||    
T  2022788 tttatgttattttacatttataagttagttctaccg-ctaattttaccaaacacttcaattagcttatcagct 2022717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17047399 - 17047470
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| |||||||||||||| |||| ||||    
T  17047399 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcaattagcttatcagct 17047470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17499345 - 17499274
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||| ||||| | | ||||||| ||||||||| |||| |||| ||||    
T  17499345 tttatgtcattttacatttatcagttagttgaaccgctat-ttttaccaaacacttcagttagcttatcagct 17499274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19716515 - 19716586
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||||||| |  | |||||||| |||| ||||||||| |||||||||    
T  19716515 tttatgtaattttacatttatcagctagttaaactg-ctaattttaccaaacatttcaattagcttataagct 19716586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19898377 - 19898306
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| ||||||||| ||||    
T  19898377 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagtttatcagct 19898306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26204943 - 26205014
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||||| | ||||||| ||||||||| |||| |||| ||||    
T  26204943 tttatgtcattttacatttatcagctagttgaaccgttat-ttttaccaaacacttcagttagcttatcagct 26205014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 26758312 - 26758241
Alignment:
Q  170 agtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    ||||||||||||||| |||||  ||  |||||||||| | ||| |||||||||| ||||||||||| ||||||    
T  26758312 agtttacctaaaattgaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 26758241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31149893 - 31149826
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttata 69  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| |||||||||||||| |||||    
T  31149893 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcaattagcttata 31149826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36378488 - 36378417
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||| ||||| ||| || ||||| |  |||||||| ||||||||||||||||||| ||||    
T  36378488 tttatgtaattttacatctatcagttaattgaaccgcta-attttaccaaacacttcaattagtttatcagct 36378417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 391 - 463
Target Start/End: Original strand, 42304514 - 42304586
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtaccta 463  Q
    ||||||||||| |||| |||| ||||||||  ||| |||||||||||| || || ||| |||||||| |||||    
T  42304514 gtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctccgaattaacatgattttggcaccta 42304586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42964535 - 42964606
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||| ||||| ||||| || |||||||| ||||| | || |||||||| ||||    
T  42964535 tttatgtcattttacatttatcaactagttgaaccg-ttaattttaccaaacacgttaactagtttatcagct 42964606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47134032 - 47133961
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||| ||||| | | ||||||| ||||||||| ||||| ||| ||||    
T  47134032 tttatgtcattttacatttatcagttagttgaaccgctat-ttttaccaaacacttcagttagtgtatcagct 47133961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50170777 - 50170706
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||||||||| | | ||||||| ||||||||| |||| |||| ||||    
T  50170777 tttatgtcattttacatttatcagctagttaaaccgctat-ttttaccaaacacttcagttagcttatcagct 50170706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50351699 - 50351770
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||||| | ||||||| ||||||||| |||| |||| ||||    
T  50351699 tttatgtcattttacatttatcagctagttgaaccgttat-ttttaccaaacacttcagttagcttatcagct 50351770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 6e-88; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 100 - 312
Target Start/End: Complemental strand, 25050352 - 25050140
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaat 199  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||| |||| || ||||    
T  25050352 aaggttttacaactcgagagtttacctcaactcgttttgcccaagtaaactcgactcgagaactcggacgagtttacctaaaattaatattaaataaaat 25050253  T
Q  200 ttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataaa 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||||||||| |||||||    
T  25050252 ttattatttacatgacatatgtaaactaatataatattgtaaatagtccaatactgtaaaatatgactaaattataaaggttttcaaccaccataataaa 25050153  T
Q  300 acattatgttcaa 312  Q
    |||||||||||||    
T  25050152 acattatgttcaa 25050140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 118 - 312
Target Start/End: Original strand, 21718097 - 21718290
Alignment:
Q  118 agtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacat 217  Q
    ||||||||| | ||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||| || || ||| |||||||| ||||||    
T  21718097 agtttaccttagctcgttttgtccacgtaaactcagctcgagaactcgtacgagtttacctaaaattaaaattaaat-aatttttttatttacttgacat 21718195  T
Q  218 atgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataaaacattatgttcaa 312  Q
    |||||| |||||||||||||||||||| || ||||||  ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||    
T  21718196 atgtaacctaatataatattgtaaataatccaatagtgcaaaatatgattaaattatgaaggttttcaaccaccgtaataaaacattatgttcaa 21718290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 99 - 267
Target Start/End: Complemental strand, 43173682 - 43173514
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| || |||||||| ||||||||||||||||| |||    
T  43173682 caaggttttgcaactcgagagtttacctcaactcgttttatttaggtaaactcgactcgagaactcgtatgagtttacataaaattaaaattacataaaa 43173583  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgact 267  Q
    |||||||| | |||||||| | ||| |||||||||||||||||||||   ||||||  |||||||||||    
T  43173582 tttattatatgcatgacatgtataagctaatataatattgtaaataggtcaatagtgcaaaatatgact 43173514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 362 - 516
Target Start/End: Complemental strand, 7665705 - 7665552
Alignment:
Q  362 tttactcgagtttacccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacc 461  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |    
T  7665705 tttacacgagtttacc-gagttaactctagtcaaactcgtcaaatattccgattttaccaaaaatcgagtttacctccgagttaacacgattttggtagc 7665607  T
Q  462 taaaaacgtaaattcattaaactcggcgagttaacactaaatttatgaaacattg 516  Q
    |||||||||||| |   |||| ||||||||||||||||  |||| || |||||||    
T  7665606 taaaaacgtaaactaggtaaattcggcgagttaacactcgatttgtggaacattg 7665552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 4962023 - 4962168
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    |||||||||| |||||| |||||||||||||||| |||| | | |||||||||||||||||||||| | ||||||||||||||||||||||||| || ||    
T  4962023 ccaaggttttgcaactctagagtttacctcaacttgttt-gcctaggtaaactcgactcgagaact-tgacgagtttacctaaaattaaaattatataaa 4962120  T
Q  198 atttattatttacatgacatatgtaaactaatataatattgtaaatag 245  Q
    ||||||||| | |||||||||| ||| |||||||||||||||||||||    
T  4962121 atttattatatgcatgacatatataagctaatataatattgtaaatag 4962168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 100 - 242
Target Start/End: Complemental strand, 24064083 - 24063942
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaat 199  Q
    ||||||| ||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||| |||||||||||| || ||||    
T  24064083 aaggtttaacaacttaagagtttacctcaactcgttttgcctaggtaaactcgactcgagaactcgtatgagtttacct-aaattaaaattatataaaat 24063985  T
Q  200 ttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    ||||||| | || ||||||| ||| ||||||||||||||||||    
T  24063984 ttattatatgcacgacatatataagctaatataatattgtaaa 24063942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 144 - 278
Target Start/End: Original strand, 7436915 - 7437049
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| | |||||||||| ||| |||||||||||||||||||    
T  7436915 gtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaaatttattatatgcatgacatatataagctaatataatattgtaaat 7437014  T
Q  244 -agtcaaatagtataaaatatgactaaattataaag 278  Q
     |||| ||||||  ||||||||||| ||||| ||||    
T  7437015 aagtc-aatagtgcaaaatatgacttaattacaaag 7437049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 362 - 516
Target Start/End: Original strand, 45602403 - 45602557
Alignment:
Q  362 tttactcgagtttacccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacc 461  Q
    ||||| |||||||  |||||||||||| |||||||||||||||||||| ||||||||||  |||| ||||||||||  |||||||||| |||||  ||||    
T  45602403 tttacccgagtttgaccgagttaactcgagtcaaactcgtcaaacatttcgattttaccagaaattgagtttacctacgagttgacacaattttaatacc 45602502  T
Q  462 taaaaacgtaaattcattaaactcggcgagttaacactaaatttatgaaacattg 516  Q
     ||||||||||||||  |||||||||||||||||||||  |||  ||||||||||    
T  45602503 caaaaacgtaaattcggtaaactcggcgagttaacactcgattcgtgaaacattg 45602557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 377 - 473
Target Start/End: Complemental strand, 25049971 - 25049875
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||| |||||||||| |||||||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25049971 ccgagttaactcgagtcaaactcatcaaacattccgattttactagaaatcgagtttacctccgagttgacacgattttggtacctaaaaacgtaaa 25049875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 144 - 279
Target Start/End: Complemental strand, 33694012 - 33693877
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||| || ||||||||||| | |||||||||| ||| |||||||||||||||||||    
T  33694012 gtaaactcaactcgagaactcgtacgagtttaccaaaaattaaaattatataaaatttattatatgcatgacatatataagctaatataatattgtaaat 33693913  T
Q  244 agtcaaatagtataaaatatgactaaattataaagg 279  Q
    ||   ||||||  ||||||||||| ||||| |||||    
T  33693912 agggcaatagtgcaaaatatgacttaattacaaagg 33693877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 7667520 - 7667403
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaat 199  Q
    |||||||||||||| ||||||||||||||||||||||||   | ||||||||||||||||||||  ||| |||||||||||||||||| ||| || ||||    
T  7667520 aaggttttacaacttgagagtttacctcaactcgttttgcttaagtaaactcgactcgagaactagtacaagtttacctaaaattaaagttaaataaaat 7667421  T
Q  200 ttattatttacatgacat 217  Q
    ||| ||||||||||||||    
T  7667420 ttagtatttacatgacat 7667403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 103 - 242
Target Start/End: Original strand, 22488419 - 22488563
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgag-----aactcttacgagtttacctaaaattaaaattacattaa 197  Q
    |||||||||||||||||||||||||||||||||||  | || ||||||||||||||      ||||| ||||||||||||||||||| |||||  ||  |    
T  22488419 gttttacaactcgagagtttacctcaactcgttttacctagttaaactcgactcgaattgtaaactcgtacgagtttacctaaaattgaaattttataca 22488518  T
Q  198 atttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||    
T  22488519 atttattatatgcatgacatatgtaagctaatataatattgtaaa 22488563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 100 - 242
Target Start/End: Complemental strand, 53836704 - 53836563
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaat 199  Q
    |||||||| ||||| ||||||||||||| ||||||||| || || |||||||||||||| ||||| |||||||||||||||||||||||||  ||  |||    
T  53836704 aaggttttgcaacttgagagtttacctcgactcgttttatctagataaactcgactcgaaaactcgtacgagtttacctaaaattaaaattttatacaat 53836605  T
Q  200 ttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    ||||||| | ||| |||||| ||| ||||||||||| ||||||    
T  53836604 ttattatatgcat-acatatctaagctaatataatactgtaaa 53836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 103 - 266
Target Start/End: Complemental strand, 1666665 - 1666502
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    ||||| ||||| || |||||| ||||| |||||||||  ||||||| ||||||||| ||||| |||||||||| ||||||| |||||||  | |||||||    
T  1666665 gttttgcaacttgaaagtttatctcaattcgttttgttaaggtaaattcgactcgaaaactcgtacgagtttatctaaaatgaaaattatgtaaaattta 1666566  T
Q  203 ttatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgac 266  Q
    |||| | ||||| |||| ||| |||||||||||||||||||||   |||| | |||||||||||    
T  1666565 ttatatgcatgaaatatataacctaatataatattgtaaataggtcaataatgtaaaatatgac 1666502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 99 - 231
Target Start/End: Original strand, 53644751 - 53644882
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||  | | ||||| |||| |||  ||||| ||||||||||||||||||| |||||| || |||    
T  53644751 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaattcgaatcgtaaactcgtacgagtttacctaaaatt-aaattatataaaa 53644849  T
Q  199 tttattatttacatgacatatgtaaactaatat 231  Q
    ||||||||  | || |||||||||| |||||||    
T  53644850 tttattatacatataacatatgtaagctaatat 53644882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 367 - 499
Target Start/End: Original strand, 52617614 - 52617747
Alignment:
Q  367 tcgagtttacccgagt--taactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaa 464  Q
    |||||||||| |||||  ||||| ||||||||||||| |||| |||||||||||||  ||| |||||||||||| ||||| |||||||||| ||||||||    
T  52617614 tcgagtttacacgagtgttaact-tagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaa 52617712  T
Q  465 aaacgtaaattcattaaactcggcgagttaacact 499  Q
    ||||||||||||  ||| ||| | |||||||||||    
T  52617713 aaacgtaaattcgataatctcagagagttaacact 52617747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 391 - 476
Target Start/End: Complemental strand, 16155250 - 16155165
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||||||| |||| |||||| | |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  16155250 gtcaaactcgtcaaaccttccaattttatcaaaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaattc 16155165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 21386499 - 21386607
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| || ||||||||||  ||||||||||||||||  |||| ||||||||||| |||||||||| ||||| ||  ||||||||| ||    
T  21386499 gtcaaactcgtcaaacttttcgattttaccagaaatcgagtttacctctaagttaacacgattttgatacctaaaaatgtaaactcggtaaactcggaga 21386598  T
Q  491 gttaacact 499  Q
    |||||||||    
T  21386599 gttaacact 21386607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 99 - 279
Target Start/End: Complemental strand, 49459169 - 49458974
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaa-------------ctcgactcgagaactcttacgagtttacctaaaatta 185  Q
    ||||||||| |||||||||||||||||||||||||||| ||| |||||||             || |||||||||| || ||||||||||||||||||||    
T  49459169 caaggttttgcaactcgagagtttacctcaactcgtttcgtctaggtaaatttgactcgtaaacttgactcgagaattcgtacgagtttacctaaaatta 49459070  T
Q  186 aaattacattaaatttattatttacatg--acatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg 279  Q
    |||||| || ||||||||||| | || |  | |||| ||| |||||||||||||||||||||   ||||||  ||||||||||| ||||| |||||    
T  49459069 aaattatataaaatttattatatgcaagccatatatataagctaatataatattgtaaataggtcaatagtgcaaaatatgacttaattacaaagg 49458974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 389 - 516
Target Start/End: Complemental strand, 39038625 - 39038498
Alignment:
Q  389 tagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggc 488  Q
    ||||||||||||| |||| |||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||  ||| ||| |     
T  39038625 tagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacaccatttttgtacctaaaaacgtaaattcgataatctcaga 39038526  T
Q  489 gagttaacactaaatttatgaaacattg 516  Q
    |||||||||||  |||| || |||||||    
T  39038525 gagttaacactcgatttgtggaacattg 39038498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 40064925 - 40064798
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||| ||||||||||||||||||||||||||||||||||    |||||||||||| |||  ||||| |||||||||| | |||||| |||||| || |||    
T  40064925 caagcttttacaactcgagagtttacctcaactcgtttt----aggtaaactcgaatcgtaaactcgtacgagtttatccaaaatt-aaattatataaaa 40064831  T
Q  199 tttattatttacatgacatatgtaaactaatat 231  Q
    |||||||| || || |||||||||| |||||||    
T  40064830 tttattatatatataacatatgtaagctaatat 40064798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 26107871 - 26107754
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||||||| ||||  |||||||||||||||| ||||| ||| |||||| ||||||||||||||||| || |||    
T  26107871 gttaactc-agtcaaactcgttaaaccttccgattgtaccagaaatcgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcgtta 26107773  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||| ||||    
T  26107772 atctcggagagttatcact 26107754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 27163135 - 27163017
Alignment:
Q  101 aggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatt 200  Q
    ||||||||||||| |||||||| |||||||| ||| | |  | ||||| ||||||||  ||||| ||| |||||||||||||||||||||| || |||||    
T  27163135 aggttttacaacttgagagtttgcctcaacttgttatatttatgtaaattcgactcgtaaactcgtacaagtttacctaaaattaaaattatataaaatt 27163036  T
Q  201 tattatttacatgacatat 219  Q
    |||||| ||||||||||||    
T  27163035 tattatatacatgacatat 27163017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 48379692 - 48379575
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| || | |||||||||||||  |||||||||||||||| || || |||||||||| ||||||||||||||||| ||  ||    
T  48379692 gttaactc-agtcaaactcgttaagccttccgattttaccagaaatcgagtttacctcagaattaacacgatttttgtacctaaaaacgtaaactcggta 48379594  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  48379593 atctcggagagttaacact 48379575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 8598745 - 8598638
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  8598745 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 8598646  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  8598645 gttgacac 8598638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 113 - 279
Target Start/End: Original strand, 21385821 - 21385980
Alignment:
Q  113 tcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacat 212  Q
    ||||||||||||||||||||||||||   || |||||||||||||||||||  ||||     ||||||||||||||||| || |||||||||||   |||    
T  21385821 tcgagagtttacctcaactcgttttgcttagataaactcgactcgagaacttgtacg-----acctaaaattaaaattatatgaaatttattatacgcat 21385915  T
Q  213 gacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg 279  Q
    ||||||  ||  |||||||||||||| ||||||   ||||||  ||||||||||| ||||| |||||    
T  21385916 gacata--tatgctaatataatattgcaaataggttaatagtgaaaaatatgacttaattacaaagg 21385980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 9818579 - 9818661
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  9818579 gtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 9818661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 20833439 - 20833322
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||| |||||||||| ||||||||||||||||| ||  ||    
T  20833439 gttaactc-agtcaaactcgttaaaccttccgattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgata 20833341  T
Q  481 aactcggcgagttaacact 499  Q
    | ||| | |||||||||||    
T  20833340 atctcagagagttaacact 20833322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 52810900 - 52810783
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||||||||||||  ||  |||||||||||| ||||| |||| ||||| ||||||||||||||||| ||  ||    
T  52810900 gttaactc-agtcaaactcgttaaaccttccgattttaccagaacccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcggta 52810802  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  52810801 atctcggagagttaacact 52810783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 7437586 - 7437694
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||  || || ||||||||||||| |||| |||||||| ||| | ||| |||||||||||||||||||| | ||||| ||| ||||||||| ||    
T  7437586 gtcaaactcaccataccttccgattttaccaaaaaccgagtttatctccgtgttaacacgattttggtacctaaacaagtaaactcagtaaactcggaga 7437685  T
Q  491 gttaacact 499  Q
    |||||||||    
T  7437686 gttaacact 7437694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 392 - 499
Target Start/End: Complemental strand, 17946760 - 17946653
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgag 491  Q
    |||||||||| |||| |||||||||||||  ||| |||||||||||| ||||| ||| |||||| ||||||||||||||||| ||  ||| ||||| ||     
T  17946760 tcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcgataatctcggagaa 17946661  T
Q  492 ttaacact 499  Q
    ||||||||    
T  17946660 ttaacact 17946653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 516
Target Start/End: Original strand, 23753047 - 23753181
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| ||||||||| || |||| |||| |||||||| |||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  23753047 gttaactc-agtcaaactggttaaaccttccaattttaccaaaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggta 23753145  T
Q  481 aactcggcgagttaacactaaatttatgaaacattg 516  Q
    | ||||| |||||||||||  ||||  |||||||||    
T  23753146 atctcggagagttaacactcgatttgcgaaacattg 23753181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 30237978 - 30238057
Alignment:
Q  166 tacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaatag 245  Q
    ||||||||||||||||||||||| || || ||||||||||| |||| ||||||||| | |||||||||||||| ||||||    
T  30237978 tacgagtttacctaaaattaaaagtatataaaatttattatatacaagacatatgttagctaatataatattgcaaatag 30238057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 37833475 - 37833345
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaat 199  Q
    ||||||||| | ||||||||||||||||||||||||||  | | |||||||||| |||  ||||| ||| | || |||||||||| |||||| || ||||    
T  37833475 aaggttttatagctcgagagtttacctcaactcgttttaactatgtaaactcgaatcgtaaactcgtacaaattaacctaaaatt-aaattatataaaat 37833377  T
Q  200 ttattatttacatgacatatgtaaactaatat 231  Q
    ||||||| || || |||||||||| |||||||    
T  37833376 ttattatatatataacatatgtaagctaatat 37833345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 45731406 - 45731315
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaatta 191  Q
    ||||||||| ||||||||||||||||||||||||||||  | | |||||||||| | |  ||||| || |||||||||||||||||||||||    
T  45731406 aaggttttataactcgagagtttacctcaactcgttttagctatgtaaactcgaattgtaaactcgtatgagtttacctaaaattaaaatta 45731315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 49296202 - 49296095
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| || ||||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  49296202 gtcaaactcgtcaaacttttcgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 49296103  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  49296102 gttgacac 49296095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 4962746 - 4962828
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| || |||||||||   ||||||||||||||||  |||| ||||||||||| ||||||||||||||||    
T  4962746 gtcaaactcgtcaaacctttcgattttacttgaaatcgagtttacctccaagttaacacgattttgatacctaaaaacgtaaa 4962828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 27988263 - 27988341
Alignment:
Q  113 tcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaatta 191  Q
    ||||||||||||||||||| |||||||  || ||||||||| | ||||| || ||||||||||||||||||||||||||    
T  27988263 tcgagagtttacctcaacttgttttgtttagataaactcgatttgagaattcgtacgagtttacctaaaattaaaatta 27988341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 497
Target Start/End: Complemental strand, 33693342 - 33693236
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| ||| |||||||||  ||||||||||||||||  |||| ||||||||||||||  ||||| | |||| ||  ||||||||| ||    
T  33693342 gtcaaactcgtcaaaccttctgattttaccagaaatcgagtttacctccaagttaacacgattttggtatgtaaaatcataaactcggtaaactcggaga 33693243  T
Q  491 gttaaca 497  Q
    |||||||    
T  33693242 gttaaca 33693236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 37455389 - 37455272
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||||||||  ||  ||    
T  37455389 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggta 37455291  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  37455290 atctcggagagttaacact 37455272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 40897673 - 40897556
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| |||||| |  ||| ||| |||||||| ||||| |||||||||| |||||||||| |||||||||  ||    
T  40897673 gttaactc-agtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaatcgtaaattcggta 40897575  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  40897574 atctcggagagttaacact 40897556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 49458444 - 49458362
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| |||||||||||||  ||||||||||||| || ||||| |||| |||||| |||||||| |||||||    
T  49458444 gtcaaactcgtcaaaccttccgattttaccagaaatcgagtttacttcagagttaacacaattttgatacctaaacacgtaaa 49458362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 50761758 - 50761875
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| |||| |||  ||||| | |||||||| ||||| |||||||||| ||||||||||||||||| ||  ||    
T  50761758 gttaactc-agtcaaactcgttaaaccttccaatttcaccagaaatctattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggta 50761856  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  50761857 atctcggagagttaacact 50761875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 50902967 - 50903084
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| |||||||||||| ||||| |||||||||| |||| |||||||||||| ||  ||    
T  50902967 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcgata 50903065  T
Q  481 aactcggcgagttaacact 499  Q
      ||||| |||||||||||    
T  50903066 ttctcggagagttaacact 50903084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 51737345 - 51737462
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| ||||||||||||   ||| |||||||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  51737345 gttaactc-agtcaaactcgttaaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 51737443  T
Q  481 aactcggcgagttaacact 499  Q
    | ||| | |||||||||||    
T  51737444 atctcagagagttaacact 51737462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 392 - 505
Target Start/End: Complemental strand, 54629383 - 54629270
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgag 491  Q
    |||||||||| |||| || || ||||| |  |||||||||||||||| ||||| |||||||||| ||||||||||||||||| ||  ||| ||| | |||    
T  54629383 tcaaactcgttaaacctttcgcttttatcagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagag 54629284  T
Q  492 ttaacactaaattt 505  Q
    |||||||| |||||    
T  54629283 ttaacactcaattt 54629270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 49296874 - 49296719
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactct-------------tacgagtttacctaaaatta 185  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||  |||||              ||||||||||||||||||||    
T  49296874 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaatta 49296775  T
Q  186 aaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||  ||  |||||||||| | ||| |||||||||| ||||||||||| ||||||    
T  49296774 aaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 49296719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 8599717 - 8599658
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    |||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||    
T  8599717 ccaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 8599658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 516
Target Start/End: Original strand, 31645919 - 31646053
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||| | |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||||||||  ||  ||    
T  31645919 gttaactc-agtcaaactctttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggta 31646017  T
Q  481 aactcggcgagttaacactaaatttatgaaacattg 516  Q
    | ||||| |||||||||||  ||||  |||||||||    
T  31646018 atctcggagagttaacactcgatttgcgaaacattg 31646053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 9817988 - 9818030
Alignment:
Q  95 aagccaaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9817988 aagccaaggttttacaactcgagagtttacctcaactcgtttt 9818030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 18750185 - 18750068
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| || | |||| ||||||||  ||| |||||||||||| ||||| ||| |||||| ||||||||||||||||| ||| ||    
T  18750185 gttaactc-agtcaaactcgttaagccttccaattttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcagta 18750087  T
Q  481 aactcggcgagttaacact 499  Q
    |  || | |||||||||||    
T  18750086 atatcagagagttaacact 18750068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 423 - 499
Target Start/End: Original strand, 21718460 - 21718536
Alignment:
Q  423 aaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacact 499  Q
    |||||||||||| ||  |||||||||||||||||||| || |||||||||| ||| |||| ||| ||||||||||||    
T  21718460 aaatcgagtttatctttgagttgacacgattttggtatcttaaaacgtaaactcagtaaaatcgacgagttaacact 21718536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 25932206 - 25932150
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgact 155  Q
    ||||||||||||||| |||||||||| |||||||||||||||  |||||||||||||    
T  25932206 caaggttttacaacttgagagtttacttcaactcgttttgtctgggtaaactcgact 25932150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 32766661 - 32766605
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatt 200  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| || |||||    
T  32766661 gtaaactcgacttgagaactcgtacgagtttacctaaaattaaaattatataaaatt 32766605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 43173010 - 43172939
Alignment:
Q  394 aaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaa 465  Q
    |||||| |||||| || ||||||||||  |||||||||||||||| ||||  ||||||||||||||||||||    
T  43173010 aaactcttcaaacctttcgattttaccagaaatcgagtttacctccgagtcaacacgattttggtacctaaa 43172939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 486
Target Start/End: Complemental strand, 53836048 - 53835953
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcg 486  Q
    |||||||||||||||| |||||||||||||  ||||| ||||||||||  |||| ||||| |||| | ||||||| ||||||| ||  ||||||||    
T  53836048 gtcaaactcgtcaaactttccgattttaccagaaatcaagtttacctccaagttaacacgtttttagcacctaaacacgtaaactcggtaaactcg 53835953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 1545328 - 1545266
Alignment:
Q  180 aaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||||||||||||  |||||||||| | ||||||||||||||  |||||||||||||||||    
T  1545328 aaattaaaattacatataatttattatatgcatgacatatgtaagttaatataatattgtaaa 1545266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 9030497 - 9030563
Alignment:
Q  178 taaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    |||||||||||||| || ||||||||||| | ||||||||| |||| |||||||||||||| |||||    
T  9030497 taaaattaaaattatataaaatttattatatccatgacataagtaagctaatataatattgcaaata 9030563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 22489499 - 22489581
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||| || || || ||||| |||||| ||||||| |||||||    
T  22489499 gtcaaactcgttaaaccttccgattttaccagaaatcgagtttacatctgatttaacacgtttttggcacctaaacacgtaaa 22489581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 27262041 - 27262003
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27262041 caaggttttacaactcgagagtttacctcaactcgtttt 27262003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 167 - 242
Target Start/End: Complemental strand, 8599635 - 8599560
Alignment:
Q  167 acgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||||||||||||||| |||||  ||  |||||||||| | ||||| |||||||| ||||||||||| ||||||    
T  8599635 acgagtttacctaaaattgaaattttatacaatttattatatgcatgatatatgtaagctaatataatactgtaaa 8599560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 47466817 - 47466856
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  47466817 ccaaggttttacaactcgagagtttatctcaactcgtttt 47466856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 47466876 - 47466962
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    |||||||||||| |  ||||| ||||||||||||||||||||||||||  | ||||||||||| || ||  ||||||||| |||||||    
T  47466876 gtaaactcgacttgtaaactcgtacgagtttacctaaaattaaaatta-ttaaaatttattatatatatagcatatgtaagctaatat 47466962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 49294367 - 49294253
Alignment:
Q  116 agagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgac 215  Q
    ||||||||||||||||||||||    | |||||||||| |||  ||||  |||||||||| |||||||| |||||| || |||||||| || || || ||    
T  49294367 agagtttacctcaactcgttttagttatgtaaactcgaatcgtaaacttgtacgagtttatctaaaatt-aaattatataaaatttatcatatatataac 49294269  T
Q  216 atatgtaaactaatat 231  Q
    |||||||| |||||||    
T  49294268 atatgtaagctaatat 49294253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 36673810 - 36673895
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaa 467  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| |||| ||||||    
T  36673810 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacttaaaaa 36673895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 44905513 - 44905630
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| ||||||| |||| || | ||| |||||||||  ||| |||| ||||||| || || |||||||||| |||||||| |||||||| ||  ||    
T  44905513 gttaactc-agtcaaattcgttaagccttctgattttaccagaaaccgagattacctcagaattaacacgatttttgtacctaagaacgtaaactcggta 44905611  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  44905612 atctcggagagttaacact 44905630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 7436859 - 7436896
Alignment:
Q  101 aggttttacaactcgagagtttacctcaactcgttttg 138  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  7436859 aggttttgcaactcgagagtttacctcaactcgttttg 7436896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 27261983 - 27261896
Alignment:
Q  144 gtaaactcgactc-gagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    ||||||||||||| |  ||||| ||||||||||||||||||| |||||| || |||||||| || || || |||||||||| |||||||    
T  27261983 gtaaactcgactcagtaaactcgtacgagtttacctaaaatt-aaattatataaaatttatgatatatataacatatgtaagctaatat 27261896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 9818066 - 9818136
Alignment:
Q  160 aactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    ||||| |||||||| ||||||||||||||||| || ||||||||||| || ||  ||||||||| |||||||    
T  9818066 aactcgtacgagtt-acctaaaattaaaattatataaaatttattatatatatagcatatgtaagctaatat 9818136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 33694070 - 33694031
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttg 138  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  33694070 caaggttttgcaactcgagagtttaccttaactcgttttg 33694031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 499
Target Start/End: Complemental strand, 45863307 - 45863248
Alignment:
Q  440 gagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacact 499  Q
    ||||| |||||||||| ||||||||||||||||| || |||| ||| | |||||||||||    
T  45863307 gagttaacacgatttttgtacctaaaaacgtaaactctttaatctcagagagttaacact 45863248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 434
Target Start/End: Complemental strand, 49293889 - 49293846
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagttta 434  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||    
T  49293889 gtcaaactcgtcaaactttccgatttcaccaaaaatcgagttta 49293846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 53645332 - 53645407
Alignment:
Q  395 aactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgt 470  Q
    |||||||||||| ||||||||| ||| ||||  ||||||||||| ||||| | ||| |||||  ||||||||||||    
T  53645332 aactcgtcaaactttccgatttcaccaaaaactgagtttacctctgagtttatacgtttttgccacctaaaaacgt 53645407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 25932137 - 25932049
Alignment:
Q  155 tcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaa--ctaatataatattgtaaata 244  Q
    |||||||||| ||||||||||| ||||| ||   ||| || ||||||||||| ||||||| |||| || |  ||||||||||||||||||||    
T  25932137 tcgagaactcgtacgagtttacttaaaaata---ttatataaaatttattatatacatgatatatatataagctaatataatattgtaaata 25932049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 435
Target Start/End: Complemental strand, 27261488 - 27261435
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttac 435  Q
    |||||||| ||||||| ||||||||| ||||||||| ||| ||||||||||||||    
T  27261488 gttaactc-agtcaaattcgtcaaactttccgatttcaccaaaaatcgagtttac 27261435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21707782 - 21707853
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||| ||||| ||||| | | ||||||| ||||||||| |||| |||| ||||    
T  21707782 tttatgtcattttacatttatcaactagttgaaccgctat-ttttaccaaacacttcagttagcttatcagct 21707853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25571046 - 25571117
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| ||||||||| ||||    
T  25571046 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagtttatcagct 25571117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 32766705 - 32766661
Alignment:
Q  113 tcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||||||||||||||| |||||||||| | ||| ||||||||||    
T  32766705 tcgagagtttacctcaattcgttttgtctatgtatactcgactcg 32766661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35500272 - 35500343
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| |||||||||||||| |||| ||||    
T  35500272 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcaattagcttatcagct 35500343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37088952 - 37089023
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||||||||| | | ||||||| ||||||||| |||| |||| ||||    
T  37088952 tttatgtcattttacatttatcagctagttaaaccgctat-ttttaccaaacacttcagttagcttatcagct 37089023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41519216 - 41519287
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| || |||||| | ||||| |||||||| |||||||||    
T  41519216 tttatgtcattttacatttatcagctagttgaaccg-ttcattttatcaaacacctcaattagcttataagct 41519287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42218284 - 42218355
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| |  |||||||| |||||||||||||  |||||||||    
T  42218284 tttatgtcattttacatttatcagctagttcaaccgcta-attttaccaaacacttcaattaacttataagct 42218355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 45369540 - 45369611
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||| || |   |||||||||| ||||| |||||||| |||||||||    
T  45369540 tttatgtcattttacatttatcagttagttgaa-caacttattttaccaaacacctcaattagcttataagct 45369611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 54541506 - 54541435
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| ||||||||| ||||    
T  54541506 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagtttatcagct 54541435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 54671667 - 54671596
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||||| | ||||||| ||||||||| |||| |||| ||||    
T  54671667 tttatgtcattttacatttatcagctagttgaaccgttat-ttttaccaaacacttcagttagcttatcagct 54671596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 1e-70; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 27149472 - 27149281
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaat 199  Q
    ||||||||||||||  ||||||||||| ||||||||||| | | |||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  27149472 aaggttttacaacttaagagtttaccttaactcgttttgcctaagtaagctcgactcgagaactcgtacgagtttacctaaaatttaaattaaattaaat 27149373  T
Q  200 ttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccacc 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||    
T  27149372 ttattatttacatgacatatgtaaactaatataatattgtaaatagtccaatagtgcaaaatatgactaaattataaaggttttcaaccacc 27149281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 99 - 279
Target Start/End: Complemental strand, 42611306 - 42611126
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||     
T  42611306 caaggttttacaactcgagagtttacctcaactcgttttgcctaggtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaag 42611207  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg 279  Q
    |||||||| | |||||||||| ||| ||||||| |||||||||||||   ||||||  ||||||| ||| ||||| |||||    
T  42611206 tttattatatgcatgacatatataagctaatatgatattgtaaataggtcaatagtgcaaaatattacttaattacaaagg 42611126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 115 - 290
Target Start/End: Original strand, 33496746 - 33496921
Alignment:
Q  115 gagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatga 214  Q
    |||| |||||||||| |||||||| | | ||||| |||||||   ||||| |||||||||| ||||||||||||||| || |||||||||||||||||||    
T  33496746 gagaatttacctcaattcgttttgcctaagtaaattcgactcataaactcgtacgagtttatctaaaattaaaattaaataaaatttattatttacatga 33496845  T
Q  215 catatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccac 290  Q
    ||||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||| ||||||||    
T  33496846 catatgtaaactaatataatattgtaaatagtataatagtgcaaaatatgactaaattataaaggttttcaaccac 33496921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 145 - 312
Target Start/End: Original strand, 26201210 - 26201379
Alignment:
Q  145 taaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    |||||||||||||||||||| ||| ||||||  |||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||     
T  26201210 taaactcgactcgagaactcgtacaagtttaggtaaaattaaaattaaataaaatttattatttacatgacatatgtaatctaatataatattgtaaatg 26201309  T
Q  245 gtcaaatagtataaaatatgactaaattataaaggttatc--aaccaccgtaataaaacattatgttcaa 312  Q
    ||| |||||| || |||||||||||||||||||||||  |  || |||| ||||||||||||||||||||    
T  26201310 gtccaatagtgtataatatgactaaattataaaggtttacataagcaccataataaaacattatgttcaa 26201379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 99 - 273
Target Start/End: Complemental strand, 23017772 - 23017598
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||| | || ||||||||||| |||||||| ||  |||||||||||||||||||||| || |||    
T  23017772 caaggttttacaactcgagagtttacctcaactcgttttgactagataaactcgacttgagaactcgtataagtttacctaaaattaaaattatataaaa 23017673  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaatta 273  Q
    |||||||| | ||| ||| || |||  ||||||||||||||||||||    ||||| |||||||||||| |||||    
T  23017672 tttattatatgcattacagatataagttaatataatattgtaaataggtcgatagtgtaaaatatgacttaatta 23017598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 362 - 517
Target Start/End: Original strand, 26201775 - 26201930
Alignment:
Q  362 tttactcgagtttacccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacc 461  Q
    ||||| |||||||  |||||||||||| ||||||||||||||||||||||||||||| | | ||| ||||||||||| ||||| ||||||||||||||||    
T  26201775 tttacccgagtttgaccgagttaactcgagtcaaactcgtcaaacattccgattttagcaataattgagtttacctccgagtttacacgattttggtacc 26201874  T
Q  462 taaaaacgtaaattcattaaactcggcgagttaacactaaatttatgaaacattgt 517  Q
    |||||| ||||||||  |||||||||| ||||||||||  |||| || ||||||||    
T  26201875 taaaaatgtaaattcggtaaactcggcaagttaacactcgatttgtggaacattgt 26201930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 99 - 278
Target Start/End: Original strand, 1253843 - 1254021
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||| ||| ||||||||||||||||||||||  |   |||||||||| |||  ||||| |||||||||||||||||||||||||| || |||    
T  1253843 caaggttttaca-ctcaagagtttacctcaactcgttttacctttgtaaactcgaatcgtaaactcgtacgagtttacctaaaattaaaattatataaaa 1253941  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaag 278  Q
    |||||||| ||||| | |||||||| ||||||||||||||| |||||   ||||||  ||||||||||| ||||||||||    
T  1253942 tttattatatacataagatatgtaagctaatataatattgtcaataggtcaatagtgcaaaatatgacttaattataaag 1254021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 103 - 244
Target Start/End: Complemental strand, 21486921 - 21486780
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    |||||| ||||||||||||||||||||||| |||| |  | ||||||||||||||||||||| || ||||||| |||||||||||||||  |  ||||||    
T  21486921 gttttagaactcgagagtttacctcaactcattttctttaagtaaactcgactcgagaactcgtatgagtttagctaaaattaaaattatgtagaattta 21486822  T
Q  203 ttatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    |||| | |||||||||| ||| ||||||||||||||||||||    
T  21486821 ttatatgcatgacatatataagctaatataatattgtaaata 21486780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 377 - 473
Target Start/End: Original strand, 11735190 - 11735286
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||| ||||| |||||||||||| |||||||| ||||||    
T  11735190 ccgagttaactcgagtcaaactcggcaaacattccgattttaccagaaatcgagtttacctccgagttaacacgattttgggacctaaaatcgtaaa 11735286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 377 - 516
Target Start/End: Complemental strand, 27148945 - 27148806
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |  |||| ||| ||||||| || || ||||||||||| |||||||||||||||| ||    
T  27148945 ccgagttaactcaagtcaaactcgtcaaacattctgattttagctgaaattgaggttacctccgatttaacacgattttgatacctaaaaacgtaaactc 27148846  T
Q  477 attaaactcggcgagttaacactaaatttatgaaacattg 516  Q
      ||||||  |||||||||||||  |||| || |||||||    
T  27148845 gataaactttgcgagttaacactcgatttgtggaacattg 27148806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 389 - 499
Target Start/End: Complemental strand, 12740905 - 12740795
Alignment:
Q  389 tagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggc 488  Q
    |||||||||||||||||| |||| ||||||||  | | |||||||||||| ||||| |||||||||||||||||||||||||||| ||  ||| |||||     
T  12740905 tagtcaaactcgtcaaaccttccaattttaccagacaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcgga 12740806  T
Q  489 gagttaacact 499  Q
    |||||||||||    
T  12740805 gagttaacact 12740795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 379 - 473
Target Start/End: Original strand, 33497095 - 33497189
Alignment:
Q  379 gagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||| |||||||||||||||||||||| |||||| |  |||||||||||||||| ||||||||||||||||| ||| |||||| |||||    
T  33497095 gagttaactcaagtcaaactcgtcaaacattccaattttatcagaaatcgagtttacctccgagttgacacgattttgatacttaaaaatgtaaa 33497189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 44256418 - 44256535
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||||||||||||||| ||||| |||||||||| ||| ||||||||||||| ||  ||    
T  44256418 gttaactc-agtcaaactcgttaaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtatctaaaaacgtaaactcgata 44256516  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  44256517 atctcggagagttaacact 44256535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 505
Target Start/End: Complemental strand, 42610733 - 42610589
Alignment:
Q  361 atttactcgagtttaccc-gagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggta 459  Q
    |||||| ||||||||||| | ||||||||  |||||||||||||||| ||| |||||||||  ||| | ||||||||||  | || ||||||||||||||    
T  42610733 atttacacgagtttacccagtgttaactcg-gtcaaactcgtcaaaccttctgattttaccagaaaccaagtttacctcaaatttaacacgattttggta 42610635  T
Q  460 cctaaaaacgtaaattcattaaactcggcgagttaacactaaattt 505  Q
    |||||| ||||||||||  ||||||| | ||||||||||| |||||    
T  42610634 cctaaacacgtaaattcggtaaactcagagagttaacactcaattt 42610589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 99 - 243
Target Start/End: Complemental strand, 43172877 - 43172720
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgac-------------tcgagaactcttacgagtttacctaaaatta 185  Q
    |||||||||||||||||||||||||||||||||| ||||| | |||||||||||||             |||||||||| |||||| ||| ||||||| |    
T  43172877 caaggttttacaactcgagagtttacctcaactcattttgcctaggtaaactcgacccgtaaacttgagtcgagaactcgtacgagattatctaaaataa 43172778  T
Q  186 aaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    |||||| || ||| ||||||| | |||||||||| ||| |||| ||||||||||||||    
T  43172777 aaattatataaaaattattatatgcatgacatatataagctaaaataatattgtaaat 43172720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 6269155 - 6269036
Alignment:
Q  160 aactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatg-taaactaatataatattgtaaatagtcaaatagtataa 258  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||| ||||| | |||||  ||||| ||||||||||| ||||||   ||||||  ||    
T  6269155 aactcgtacgagtttacctaaaattaaaattatataaaatttattatatacattatatatgcaaaacttatataatattgcaaataggtcaatagtgcaa 6269056  T
Q  259 aatatgactaaattataaag 278  Q
    ||||||||| ||||||||||    
T  6269055 aatatgacttaattataaag 6269036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 99 - 244
Target Start/End: Complemental strand, 31175300 - 31175155
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||| || ||||||||||||||||||||||||| |  ||||||| |||| |||  || || || ||||| |  |||||| ||||||| || |||    
T  31175300 caaggtttta-aattcgagagtttacctcaactcgttttatttaggtaaaatcgattcgtaaattcgtaggagttaatataaaatgaaaattatataaaa 31175202  T
Q  199 tttattatttacatgacatatgtaaactaatataa-tattgtaaata 244  Q
    |||||||| ||||| |||||||||| ||||||||| |||||||||||    
T  31175201 tttattatatacatcacatatgtaagctaatataagtattgtaaata 31175155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 37328449 - 37328332
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||| ||| |||| |||||||||||||  |||||||||||||||  ||||| |||||||||| ||||||||||||||||| ||  ||    
T  37328449 gttaactc-agtcaaacacgttaaaccttccgattttaccagaaatcgagtttaccttagagttaacacgatttttgtacctaaaaacgtaaactcgata 37328351  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||| ||||||    
T  37328350 atctcggagagtcaacact 37328332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 381 - 516
Target Start/End: Complemental strand, 8675874 - 8675739
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgatttt-accgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatt 479  Q
    |||||||| ||||||||||||||||| || ||||||| |||  ||| |||||||||||  ||||| ||||||||||||||||||||||||| || ||  |    
T  8675874 gttaactc-agtcaaactcgtcaaacctttcgatttttaccagaaaccgagtttaccttagagttaacacgattttggtacctaaaaacgttaactcggt 8675776  T
Q  480 aaactcggcgagttaacactaaatttatgaaacattg 516  Q
    || ||||| |||||||||||  ||||  |||||||||    
T  8675775 aatctcggagagttaacactcgatttgcgaaacattg 8675739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 48136891 - 48136982
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| ||||||||||||||||| |||  ||||||||  |||  ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  48136891 gttaactc-agtcaaactcgtcaaaccttctaattttaccagaaactgagtttacctcagagttaacacgattttggtacctaaaaacgtaaa 48136982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 144 - 279
Target Start/End: Original strand, 5771541 - 5771674
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    ||||||||||||||| || || ||||||||||||||||||| |||||| | |||| ||||||| | |||||||||| ||| ||||||| |||| ||||||    
T  5771541 gtaaactcgactcgaaaattcgtacgagtttacctaaaattgaaattata-taaaattattatatgcatgacatatataagctaatat-atatggtaaat 5771638  T
Q  244 agtcaaatagtataaaatatgactaaattataaagg 279  Q
    ||   ||||||  ||||||||||| ||||| |||||    
T  5771639 aggtcaatagtgaaaaatatgacttaattacaaagg 5771674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 14741512 - 14741405
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| ||||||||||||   |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  14741512 gtcaaactcgtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 14741413  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  14741412 gttgacac 14741405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 21024677 - 21024590
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||| || ||||||||||| || ||  ||||||||| |||||||    
T  21024677 gtaaactcgactcgtaaactcgtacgagtttacctaaaattaaaattatataaaatttattatatatatagcatatgtaagctaatat 21024590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 389 - 499
Target Start/End: Complemental strand, 18838945 - 18838835
Alignment:
Q  389 tagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggc 488  Q
    ||||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||| |||||     
T  18838945 tagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcgga 18838846  T
Q  489 gagttaacact 499  Q
    |||||||||||    
T  18838845 gagttaacact 18838835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 29586056 - 29585939
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||| | |||| |||||||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||||||||| ||  ||    
T  29586056 gttaactc-agtcaaactcattaaaccttccgattttacccgaaaccgactttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggta 29585958  T
Q  481 aactcggcgagttaacact 499  Q
    | ||| | |||||||||||    
T  29585957 atctcagagagttaacact 29585939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 97 - 242
Target Start/End: Original strand, 37915396 - 37915554
Alignment:
Q  97 gccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgac-------------tcgagaactcttacgagtttacctaaaat 183  Q
    ||||||||||| |||||||||||||||||||||||||||||  | |||||||||||||             |||  ||||| ||||| ||||||||||||    
T  37915396 gccaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaacttgaatcgtaaactcgtacgaatttacctaaaat 37915495  T
Q  184 taaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    | |||||  ||  |||||||||| | |||||||||||||| ||||||||||| ||||||    
T  37915496 tgaaattttatacaatttattatatgcatgacatatgtaagctaatataatactgtaaa 37915554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 44121596 - 44121713
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| || | |||||||||||||  ||| ||| ||||||||  |||| |||||||||| ||||||||||||||||||||  ||    
T  44121596 gttaactc-agtcaaactcgttaagccttccgattttaccagaaaccgaatttacctcatagttaacacgatttttgtacctaaaaacgtaaattcggta 44121694  T
Q  481 aactcggcgagttaacact 499  Q
    | ||| | |||||||||||    
T  44121695 atctcagagagttaacact 44121713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 32884295 - 32884179
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacact 499  Q
    ||||||| |||||||||||||  |||  ||||||||||| ||||| || ||||||| ||||||||||||||||| ||  ||| ||||| |||||||||||    
T  32884295 gtcaaaccttccgattttaccagaaacagagtttacctcagagttaactcgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacact 32884196  T
Q  500 aaatttatgaaacattg 516  Q
      ||||| | |||||||    
T  32884195 cgatttacggaacattg 32884179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 381 - 505
Target Start/End: Complemental strand, 41827870 - 41827747
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| ||||||||| || |||  ||| |||||||||  |||  ||||||||||| ||||| |||||||||| ||||||||||||||||| ||| ||    
T  41827870 gttaactc-agtcaaacttgttaaatcttctgattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcaata 41827772  T
Q  481 aactcggcgagttaacactaaattt 505  Q
    | ||| | ||||||||||| |||||    
T  41827771 atctcagagagttaacactcaattt 41827747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 391 - 498
Target Start/End: Original strand, 4639888 - 4639995
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||  |||||||||||||  |||| ||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  4639888 gtcaaactcgtcaaaatttccgattttaccagaaatagagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 4639987  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  4639988 gttgacac 4639995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 14731756 - 14731843
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    |||||||||| |||  ||||| |||||||||||||||||||||||||| || ||||||||||| || ||  ||||||||| |||||||    
T  14731756 gtaaactcgaatcgtaaactcgtacgagtttacctaaaattaaaattatataaaatttattatatatatagcatatgtaagctaatat 14731843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 35314140 - 35314053
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    ||||||||||||||  ||||| || ||||||||||||||||||||||| || ||||||||||| || ||  |||||||||| ||||||    
T  35314140 gtaaactcgactcgtaaactcgtatgagtttacctaaaattaaaattatataaaatttattatatatatagcatatgtaaattaatat 35314053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 473
Target Start/End: Original strand, 37972548 - 37972631
Alignment:
Q  390 agtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||| |||| |||| |||||||||||||  |||  ||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  37972548 agtcaaattcgttaaaccttccgattttaccagaaactgagtttatctcagagttaacacgattttggtacctaaaaacgtaaa 37972631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 510188 - 510071
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  510188 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 510090  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  510089 atctcggagatttaacact 510071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 4639219 - 4639277
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||    
T  4639219 caaggttttgcaactcgagagtttacctcaactcgttttaactaggtaaactcgactcg 4639277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 14732309 - 14732391
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| |||| | |||||||||| ||||| ||||| |||||  |||||||||||||||    
T  14732309 gtcaaactcgtcaaactttccgatttcaccaaaaaccaagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 14732391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 28342853 - 28342736
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  28342853 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 28342755  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  28342754 atctcggagatttaacact 28342736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 38911083 - 38910998
Alignment:
Q  145 taaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    |||||||||||||  ||||| ||||||||||||||||||| |||||| || ||||||||||| || || |||||||||| |||||||    
T  38911083 taaactcgactcgtaaactcgtacgagtttacctaaaatt-aaattatataaaatttattatatatataacatatgtaagctaatat 38910998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 40460377 - 40460494
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| |||||||||| |||||| ||  ||    
T  40460377 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaagcgtaaactcggta 40460475  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||  |||||||||||    
T  40460476 atctcgaagagttaacact 40460494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 16710237 - 16710165
Alignment:
Q  172 tttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    |||||||||||||||||||| || ||||||||||| | || ||||||| ||| |||||| |||||||||||||    
T  16710237 tttacctaaaattaaaattatataaaatttattatatgcaagacatatataagctaataaaatattgtaaata 16710165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 17684473 - 17684401
Alignment:
Q  172 tttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    |||||||||||||||||||| || ||||||||||| | || ||||||| ||| |||||| |||||||||||||    
T  17684473 tttacctaaaattaaaattatataaaatttattatatgcaagacatatataagctaataaaatattgtaaata 17684401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 39784649 - 39784558
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||| ||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| |||||    
T  39784649 gttaactct-gtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaa 39784558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 411 - 499
Target Start/End: Complemental strand, 43172220 - 43172132
Alignment:
Q  411 cgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacact 499  Q
    ||||||||||  |||||||||||||||| ||||| ||| ||||||| |||||||||| ||||| ||  ||||||| | |||||||||||    
T  43172220 cgattttaccagaaatcgagtttacctccgagttaacatgattttgatacctaaaaatgtaaactcggtaaactcagagagttaacact 43172132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 16709519 - 16709439
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| ||||||| |||||| ||||||  |||  ||||||||||| |||||  |||||||||||||||||||||||||||    
T  16709519 gtcaaacttgtcaaaccttccgagtttacc--aaactgagtttacctcagagttaccacgattttggtacctaaaaacgtaaa 16709439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 17683755 - 17683675
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| ||||||| |||||| ||||||  |||  ||||||||||| |||||  |||||||||||||||||||||||||||    
T  17683755 gtcaaacttgtcaaaccttccgagtttacc--aaactgagtttacctcagagttaccacgattttggtacctaaaaacgtaaa 17683675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 467
Target Start/End: Complemental strand, 7993699 - 7993614
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaa 467  Q
    |||||||| |||||||||||| |||| |||||||||||||  ||| ||||||||||||  |||| |||||||||| |||| ||||||    
T  7993699 gttaactc-agtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcatagttaacacgatttttgtacttaaaaa 7993614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 21024152 - 21024070
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| |||| |||||||||||  ||||| ||||| |||||  |||||||| ||||||    
T  21024152 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttaccttcgagttaacacgtttttgtcacctaaaatcgtaaa 21024070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 28034511 - 28034628
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| ||||| || ||||| |||||||||| |||| |||||||||||| ||  ||    
T  28034511 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacatcagagttaacacgatttttgtacataaaaacgtaaactcggta 28034609  T
Q  481 aactcggcgagttaacact 499  Q
    | ||| | |||||||||||    
T  28034610 atctcagagagttaacact 28034628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 29614458 - 29614575
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| || | ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  29614458 gttaactc-agtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 29614556  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  29614557 atctcggagatttaacact 29614575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 29893514 - 29893397
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| || |||||| |||  |||  ||||||||||| ||||| |||||||||| |||| |||||| ||||| ||  ||    
T  29893514 gttaactc-agtcaaactcgttaaacctttcgatttcaccagaaactgagtttacctcagagttaacacgatttttgtacttaaaaatgtaaactcggta 29893416  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  29893415 atctcggagagttaacact 29893397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 33891897 - 33892014
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| ||||||| |||| |||| |||| ||||||||  ||| ||| |||||||  ||||| |||||||||| ||||||||||||||||| |   ||    
T  33891897 gttaactc-agtcaaattcgttaaaccttccaattttaccagaaaccgattttaccttagagttaacacgatttttgtacctaaaaacgtaaacttggta 33891995  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  33891996 atctcggagagttaacact 33892014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 39028629 - 39028512
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||  |||| ||| ||||  ||| ||| |||||||| ||||| |||| ||||| ||||||||||||||||| ||  ||    
T  39028629 gttaactc-agtcaaactcgttaaatcttccaattgtaccagaaaccgattttacctcagagtttacacaatttttgtacctaaaaacgtaaactcggta 39028531  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  39028530 atctcggagagttaacact 39028512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 427 - 499
Target Start/End: Complemental strand, 33383171 - 33383099
Alignment:
Q  427 cgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacact 499  Q
    |||||||| ||| |||||  ||||||||||||||||||||||||||| ||  ||| ||||| |||||||||||    
T  33383171 cgagtttatctcagagttaccacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacact 33383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 42044237 - 42044177
Alignment:
Q  145 taaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttatta 205  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||  | ||||||||||    
T  42044237 taaattcgactcgagaactcgtatgagtttacctaaaattaaaattatttaaaatttatta 42044177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47584885 - 47584956
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| |  |||||||| ||||||||||||||||||||||||    
T  47584885 tttatgtcattttacatttatcagctagttgaaccgctg-attttaccaaacacttcaattagtttataagct 47584956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 14742264 - 14742205
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    |||| ||||| |||||| ||||||||||||||||||||||  | ||||||||||||||||    
T  14742264 ccaaagttttgcaactcaagagtttacctcaactcgttttacctaggtaaactcgactcg 14742205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 37391963 - 37392033
Alignment:
Q  160 aactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    ||||| ||||||||||||||||||| |||||| || ||||||||||| || || |||||||||| |||||||    
T  37391963 aactcgtacgagtttacctaaaatt-aaattatataaaatttattatatatataacatatgtaagctaatat 37392033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 3023476 - 3023359
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| |||||| |  ||| ||| ||||||||  |||| ||| |||||| |||||||||||| |||| ||  ||    
T  3023476 gttaactc-agtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcaaagttaacatgatttttgtacctaaaaacataaactcgata 3023378  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  3023377 atctcggagagttaacact 3023359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 14742153 - 14742056
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||||||| |||  ||||| ||||||||||| ||||||| |||||  ||  |||||||||| |  || |||||||||||||||||||||| ||||||    
T  14742153 gtaaactcgaatcgtaaactcgtacgagtttacttaaaattgaaattttatacaatttattatatgtat-acatatgtaaactaatataatactgtaaa 14742056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 21024735 - 21024697
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  21024735 caaggttttacaactcgagagtttacctcaactagtttt 21024697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 23101833 - 23101716
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  |||  || |||||||  ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  23101833 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaactgattttaccttagagttaacacgatttttgtacctaaaaatgtaaactcgata 23101735  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  23101734 atctcggagatttaacact 23101716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 35313643 - 35313561
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||| |||||| ||||||||| ||| |||| ||| |||||||| ||||| ||||| |||||  | |||||||||||||    
T  35313643 gtcaaactcatcaaactttccgatttcaccaaaaaccgaatttacctccgagttaacacggttttgccatctaaaaacgtaaa 35313561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 4639299 - 4639374
Alignment:
Q  166 tacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    ||||||||||||||||||| |||||  ||  |||||||||| | ||| |||||||||| ||||||||||| ||||||    
T  4639299 tacgagtttacctaaaattgaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 4639374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21739456 - 21739385
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||| |||||  | |||||||| ||||| |||||||| |||||||||    
T  21739456 tttatgtcattttacatttatcagttagttgaaccg-ctcattttaccaaacacctcaattagcttataagct 21739385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35588270 - 35588341
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||||||||| | | ||||||| |||||||||||||| |||| ||||    
T  35588270 tttatgtcattttacatttatcagctagttaaaccgctat-ttttaccaaacacttcaattagcttatcagct 35588341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 31446034 - 31445975
Alignment:
Q  196 aaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagta 255  Q
    ||||||||||| | |||||||||| ||| ||||||||||||| ||||||||  |||||||    
T  31446034 aaatttattatatgcatgacatatataagctaatataatattataaatagttcaatagta 31445975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 37391892 - 37391927
Alignment:
Q  102 ggttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||||||||||||||||||||||| ||||    
T  37391892 ggttttacaactcgagagtttacctcaactcatttt 37391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 1254482 - 1254528
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacct 437  Q
    ||||||||| ||||||| |||||||| ||| ||||||||||||||||    
T  1254482 gtcaaactcatcaaacagtccgatttcaccaaaaatcgagtttacct 1254528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 19594296 - 19594215
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| |||| |||||||| |||  |||| ||||| |||||  | |||||||||||||    
T  19594296 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttatctcctagtttacacg-ttttgccatctaaaaacgtaaa 19594215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 435
Target Start/End: Complemental strand, 21067922 - 21067869
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttac 435  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||||||||||||    
T  21067922 gttaactc-agtcaaactcgttaaaccttccgattttaccagaaatcgagtttac 21067869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 35314194 - 35314160
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||| |||||||||||||||||||||||    
T  35314194 gttttacaacttgagagtttacctcaactcgtttt 35314160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 472
Target Start/End: Complemental strand, 23017078 - 23016997
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaa 472  Q
    |||||||||||||||  |||| |||||||   ||||||||||||||||  |||| |||| |||||| ||  |||||||||||    
T  23017078 gtcaaactcgtcaaatcttccaattttacgagaaatcgagtttacctccaagttaacacaattttgatatgtaaaaacgtaa 23016997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 476
Target Start/End: Complemental strand, 38910567 - 38910482
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    ||||| |||||||||| ||||||||| ||| |||| |||| ||||||  ||||| ||||| | |||  | ||||||||||||||||    
T  38910567 gtcaatctcgtcaaactttccgatttcaccaaaaaccgagcttaccttcgagtttacacgttcttgccatctaaaaacgtaaattc 38910482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 42813711 - 42813764
Alignment:
Q  225 ctaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaag 278  Q
    |||||||||||||||||||||   |||| | |||||||||||| ||||||||||    
T  42813711 ctaatataatattgtaaataggttaataatgtaaaatatgacttaattataaag 42813764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9488061 - 9488132
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| |||||||||||||| |||| ||||    
T  9488061 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcaattagcttatcagct 9488132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17845230 - 17845301
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||| | | |||| ||||| |  |||||||| |||||||||||||| |||||||||    
T  17845230 tttatgtcattttacatttataagtcagttgaaccgcta-attttaccaaacacttcaattagcttataagct 17845301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 504
Target Start/End: Complemental strand, 21486227 - 21486115
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgag 491  Q
    |||||||| |||||| |||  |||||||| ||| ||||||||||||   |||| ||||||||||| || ||||||  ||||| ||  |||||||   |||    
T  21486227 tcaaactcatcaaaccttctaattttaccaaaattcgagtttaccttcaagttaacacgattttgatatctaaaagtgtaaactcgataaactcaaagag 21486128  T
Q  492 ttaacactaaatt 504  Q
    |||||||| ||||    
T  21486127 ttaacactcaatt 21486115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27089143 - 27089072
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||||| | ||||||| ||||||||| |||| |||| ||||    
T  27089143 tttatgtcattttacatttatcagctagttgaaccgttat-ttttaccaaacacttcagttagcttatcagct 27089072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27189158 - 27189229
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||||| | ||||||| ||||||||| |||| |||| ||||    
T  27189158 tttatgtcattttacatttatcagctagttgaaccgttat-ttttaccaaacacttcagttagcttatcagct 27189229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33608209 - 33608138
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    |||||||| ||||||||||||||  ||||| ||||| || |||||||| |||||||| ||| | |||||||||    
T  33608209 tttatgtttttttacatttatcagctagttgaaccg-ttcattttaccaaacacttcgattcgcttataagct 33608138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42586898 - 42586827
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||| ||||| | | ||||||| ||||||||| | || |||||||||    
T  42586898 tttatgtcattttacatttatcagttagttgaaccgctat-ttttaccaaacacttcagtcagcttataagct 42586827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46878778 - 46878707
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||  |  |||||||||| |||||||||||||| |||||||||    
T  46878778 tttatgtcattttacatttatcagctagttgaatag-cttattttaccaaacacttcaattagcttataagct 46878707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 2e-69; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 99 - 312
Target Start/End: Complemental strand, 29759401 - 29759189
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||| ||||||||||||||| |||||   |||||||||||||||||||| || |||||||||| ||||||||||||||| || |||    
T  29759401 caaggttttacaactcgatagtttacctcaactcattttgcttaggtaaactcgactcgagaaatcgtacgagtttatctaaaattaaaattaaat-aaa 29759303  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataa 298  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||| |||||||||||| ||||||||  ||||||    
T  29759302 tttattatttaaatgacatatgtaaactaatataatattgtaaatagttcaatagtgcaaaatatgactatattataaaggttttcaaccacaataataa 29759203  T
Q  299 aacattatgttcaa 312  Q
    ||||||||||||||    
T  29759202 aacattatgttcaa 29759189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 103 - 312
Target Start/End: Original strand, 16548531 - 16548740
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    |||||| |||||||||||||||| ||| |||||||| ||||||||||| || |||||||||| ||||| |||||||||||||||||||| || |||||||    
T  16548531 gttttataactcgagagtttaccacaattcgttttgcccaggtaaacttgagtcgagaactcgtacgaatttacctaaaattaaaattaaataaaattta 16548630  T
Q  203 ttatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataaaaca 302  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||  |||||||||||||||| |||||||| |||||||||  |||||| ||    
T  16548631 ttatttacatggcatatgtaaactaatataatattgtaaatagtccaatcgtgcaaaatatgactaaattttaaaggttttcaaccaccaaaataaagca 16548730  T
Q  303 ttatgttcaa 312  Q
    |||| |||||    
T  16548731 ttatattcaa 16548740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 104 - 312
Target Start/End: Complemental strand, 21490369 - 21490162
Alignment:
Q  104 ttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttat 203  Q
    ||||||||||||||| ||||||| |||||| ||||   |||||||||||| |||||||||| ||| |||||| ||||||||||||||| || ||||||||    
T  21490369 ttttacaactcgagaatttaccttaactcgctttgcttaggtaaactcgattcgagaactcgtac-agtttatctaaaattaaaattaaataaaatttat 21490271  T
Q  204 tatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataaaacat 303  Q
    |||||| ||||||||| |||||||||||||||||  |||||||| ||||||  ||||||||||||||||||||||||| ||||| ||| |||||||| ||    
T  21490270 tatttatatgacatatataaactaatataatattacaaatagtccaatagtgcaaaatatgactaaattataaaggttttcaactaccataataaaatat 21490171  T
Q  304 tatgttcaa 312  Q
    |||||||||    
T  21490170 tatgttcaa 21490162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 100 - 279
Target Start/End: Original strand, 29716216 - 29716395
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaat 199  Q
    |||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| | | |||||||||||||||||||||||||  || ||||    
T  29716216 aaggttttgcaactcgagagtttacctcaactcgttttgcctaggtaaactcgactcgagatcccgtacgagtttacctaaaattaaaattgtataaaat 29716315  T
Q  200 ttattatttacatgacatatgtaaactaatataatattgtaaata-gtcaaatagtataaaatatgactaaattataaagg 279  Q
    ||||||| |  ||||||||| ||| |||||||||||||||||||| ||| ||||||  ||||||||||| ||||| |||||    
T  29716316 ttattatatggatgacatatataagctaatataatattgtaaatatgtc-aatagtgcaaaatatgacttaattacaaagg 29716395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 104 - 278
Target Start/End: Complemental strand, 31914152 - 31913978
Alignment:
Q  104 ttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttat 203  Q
    ||||||||||||||||||||||||||||||||||  | | |||||||||| ||   ||||| ||||||| |||||||||||||||||| || ||||||||    
T  31914152 ttttacaactcgagagtttacctcaactcgttttacctatgtaaactcgaatcataaactcgtacgagtatacctaaaattaaaattatataaaatttat 31914053  T
Q  204 tatttacatgacatatgtaaactaatataatattgtaaat-agtcaaatagtataaaatatgactaaattataaag 278  Q
    ||| ||||||| |||||||| |||||||||||||| |||| |||| ||||||  ||||||||||| ||||||||||    
T  31914052 tatatacatgatatatgtaagctaatataatattgcaaataagtc-aatagtgcaaaatatgacttaattataaag 31913978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 99 - 245
Target Start/End: Complemental strand, 35702012 - 35701866
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||    |||||||||| |||||  ||||  |||||||||||||||||||||||||| |  |||    
T  35702012 caaggttttacaactcgagagtttacctcaactcgttttacttaggtaaactcaactcgtaaacttgtacgagtttacctaaaattaaaattataaaaaa 35701913  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatag 245  Q
     ||||||| |||||||||||| ||| ||||||||||| |||||||||    
T  35701912 attattatatacatgacatatataagctaatataatactgtaaatag 35701866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 377 - 516
Target Start/End: Original strand, 16548846 - 16548985
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||  |||| ||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  16548846 ccgagttaactcgagtcaaattcgtcaaacatttcgattttaccagaaattgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactc 16548945  T
Q  477 attaaactcggcgagttaacactaaatttatgaaacattg 516  Q
      |||||||   |||||||||||  ||||||| |||||||    
T  16548946 gataaactcaatgagttaacactcgatttatggaacattg 16548985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 98 - 242
Target Start/End: Original strand, 5650128 - 5650272
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    |||||||||||| |||| ||||||||||||||||||||||  | |||||||||||||||   ||||| ||||||||||||||||||| |||||  ||  |    
T  5650128 ccaaggttttactactcaagagtttacctcaactcgttttacctaggtaaactcgactcataaactcgtacgagtttacctaaaattgaaattgtataca 5650227  T
Q  198 atttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    ||||||||| |  ||||||||||||| ||||||||||||||||||    
T  5650228 atttattatatgaatgacatatgtaagctaatataatattgtaaa 5650272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 33892262 - 33892369
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||||||| |||  ||||| |||||||||||||||||||||||||| || |||    
T  33892262 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgtacgagtttacctaaaattaaaattatataaaa 33892361  T
Q  199 tttattat 206  Q
    ||||||||    
T  33892362 tttattat 33892369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 7124228 - 7124371
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||| ||||||||||||||||||||  | |||||||||||| |||  |||||  |||||||||||||||||| |||||  ||  ||    
T  7124228 caaggttttgcaactcgaaagtttacctcaactcgttttacctaggtaaactcgaatcgtaaactcgcacgagtttacctaaaattgaaattttatacaa 7124327  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||||| | |||||||||| ||| ||||||||||| ||||||    
T  7124328 tttattatatgcatgacatatataagctaatataatactgtaaa 7124371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 15672705 - 15672804
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacact 499  Q
    |||||||||||||||||||||  ||||| |||||| ||  |||||||||||||||| |||||||||||| |||| ||| |||||||||||||||||||||    
T  15672705 gtcaaacattccgattttaccataaatcaagtttatctttgagttgacacgattttagtacctaaaaacataaactcagtaaactcggcgagttaacact 15672804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 377 - 506
Target Start/End: Complemental strand, 29758805 - 29758677
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  ||||| | | |||||| ||||| ||||||||||| |||||||||||||||| ||    
T  29758805 ccgagttaactcgagtcaaactcgtcaaacattccga-tttaccagaaatcaaatctacctccgagttaacacgattttgatacctaaaaacgtaaactc 29758707  T
Q  477 attaaactcggcgagttaacactaaattta 506  Q
      ||||||   |||||||||||| ||||||    
T  29758706 gataaacttaacgagttaacactcaattta 29758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 105 - 277
Target Start/End: Complemental strand, 36180280 - 36180108
Alignment:
Q  105 tttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttatt 204  Q
    |||||||||||||||||||||||||||| ||||    |||||||||| |||||  ||||  || || |||| ||||||||||||||| || ||||||||     
T  36180280 tttacaactcgagagtttacctcaactcattttacttaggtaaactcaactcgtaaacttgtatgattttatctaaaattaaaattatataaaatttatc 36180181  T
Q  205 atttacatgacatatgtaaactaatataatattgtaaata-gtcaaatagtataaaatatgactaaattataaa 277  Q
    || |||||||  || || | |||||||||||||||||||| ||| ||||||  ||||||||||| |||||||||    
T  36180180 atatacatgatgtacgtgagctaatataatattgtaaatatgtc-aatagtgcaaaatatgacttaattataaa 36180108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 3032885 - 3032758
Alignment:
Q  106 ttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttatta 205  Q
    ||||||||| ||| ||||||| |  ||||||| | |||||||||| ||| |   ||||| |||||||||||||||||| ||||||| || ||||||||||    
T  3032885 ttacaactcaagaatttaccttatttcgttttattcaggtaaacttgacacataaactcgtacgagtttacctaaaatcaaaattatataaaatttatta 3032786  T
Q  206 tttacatgacatatgtaaactaatataa 233  Q
    | |||||||||||||||| |||||||||    
T  3032785 tatacatgacatatgtaagctaatataa 3032758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 166 - 277
Target Start/End: Original strand, 4840885 - 4840996
Alignment:
Q  166 tacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatga 265  Q
    |||||||||| ||||||||||||||| ||  |||||||||| ||||||| |||||| | |||||||||||||||||||||   ||||||  |||||||||    
T  4840885 tacgagtttaactaaaattaaaattatatacaatttattatatacatgatatatgtgagctaatataatattgtaaataggtcaatagtgcaaaatatga 4840984  T
Q  266 ctaaattataaa 277  Q
    || |||||||||    
T  4840985 cttaattataaa 4840996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 34910267 - 34910162
Alignment:
Q  101 aggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatt 200  Q
    ||||||||||| |||||||||||||||||||||||||    | |||||||||| |||  ||||| |||||||||| ||||||||||||||| || |||||    
T  34910267 aggttttacaattcgagagtttacctcaactcgttttagttatgtaaactcgaatcgtaaactcgtacgagtttatctaaaattaaaattatataaaatt 34910168  T
Q  201 tattat 206  Q
    ||||||    
T  34910167 tattat 34910162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 21238203 - 21238326
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||  | | ||||||| || |||  || || |||||||||||||||||||||||||  | ||||    
T  21238203 caaggttttacaactcgagagtttacctcaactcgttttaactatgtaaacttgaatcgtaaaatcgtacgagtttacctaaaattaaaattgta-taaa 21238301  T
Q  199 tttattatttacatgacatatgtaa 223  Q
    |||||||| || ||  |||||||||    
T  21238302 tttattatatatatagcatatgtaa 21238326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 391 - 499
Target Start/End: Complemental strand, 39852905 - 39852797
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    ||||||||||| |||| |||| |||||||| |||||||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||| ||||| ||    
T  39852905 gtcaaactcgttaaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggaga 39852806  T
Q  491 gttaacact 499  Q
    |||||||||    
T  39852805 gttaacact 39852797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 498
Target Start/End: Original strand, 7125180 - 7125287
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  7125180 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 7125279  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  7125280 gttgacac 7125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 391 - 476
Target Start/End: Original strand, 33892857 - 33892942
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||||||| ||||||||| | | ||||||||||||||||| ||||| ||||| |||||  ||||||||||||||||||    
T  33892857 gtcaaactcgtcaaactttccgatttcatcaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaattc 33892942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 5651202 - 5651310
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| || | |||| |||  |||||||||||||||| ||||| |||||||||||||||||||| ||||||| ||  ||||||||  |     
T  5651202 gtcaaactcgtcaaacttttcaatttcaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaaatcgataaactcgaagt 5651301  T
Q  491 gttaacact 499  Q
    |||||||||    
T  5651302 gttaacact 5651310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 29716810 - 29716914
Alignment:
Q  395 aactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagtta 494  Q
    |||||||||||| ||| |||||||||  ||||| |||||||||  ||||| ||||||||||| |||||||||||||||| ||  |||||| || ||||||    
T  29716810 aactcgtcaaaccttctgattttaccagaaatcaagtttaccttcgagttaacacgattttgatacctaaaaacgtaaactccgtaaacttggagagtta 29716909  T
Q  495 acact 499  Q
    |||||    
T  29716910 acact 29716914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 2674509 - 2674616
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||| |||||||| |||||||||||||||||||||||||  | |  |||| |||| |||  ||||| |||||||||| ||||||||||||||| || |||    
T  2674509 caagattttacaattcgagagtttacctcaactcgttttagctatataaattcgaatcgtaaactcgtacgagtttatctaaaattaaaattatataaaa 2674608  T
Q  199 tttattat 206  Q
    ||||||||    
T  2674609 tttattat 2674616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 2675089 - 2675171
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| || |||||| ||| ||||||||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  2675089 gtcaaactcgtcaaacttttcgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 2675171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 505
Target Start/End: Original strand, 4240133 - 4240247
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    ||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||| |||||||||| | ||||||||||||||| ||  ||| ||| | ||    
T  4240133 gtcaaactcgttaaaccttccgattttaccagaaacggagtttacctcagagttaacacgatttttgcacctaaaaacgtaaactcggtaatctcagaga 4240232  T
Q  491 gttaacactaaattt 505  Q
    ||||||||| |||||    
T  4240233 gttaacactcaattt 4240247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 389 - 499
Target Start/End: Complemental strand, 13926468 - 13926358
Alignment:
Q  389 tagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggc 488  Q
    ||||||||||| | |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||||||||| ||  ||| |||||     
T  13926468 tagtcaaactccttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcgga 13926369  T
Q  489 gagttaacact 499  Q
    |||||||||||    
T  13926368 gagttaacact 13926358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 21238774 - 21238856
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||| ||||| ||||| |||||  | |||||||||||||    
T  21238774 gtcaaactcgtcaaactttccgattttaccaaaaaccgagtttacctccgagttaacacgtttttgccatctaaaaacgtaaa 21238856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 390 - 499
Target Start/End: Original strand, 4549924 - 4550033
Alignment:
Q  390 agtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcg 489  Q
    |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||| ||||||| ||  ||| ||||| |    
T  4549924 agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaacacgtaaactcggtaatctcggag 4550023  T
Q  490 agttaacact 499  Q
    ||||||||||    
T  4550024 agttaacact 4550033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 1460804 - 1460895
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| |||||||||||| || | |||||||||||||  ||| |||||||||||| ||||| |||| ||||| |||||||||||||||||    
T  1460804 gttaactc-agtcaaactcgttaagccttccgattttaccagaaaccgagtttacctctgagttaacacaatttttgtacctaaaaacgtaaa 1460895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 5949655 - 5949564
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| |||||||||||||||||    
T  5949655 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaa 5949564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 25869400 - 25869313
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatat 231  Q
    ||||||||||||||  || || |||||||||||||||||||||||||| || ||||||||||| || ||  ||||||||| |||||||    
T  25869400 gtaaactcgactcgtaaattcgtacgagtttacctaaaattaaaattatataaaatttattatatatatagcatatgtaagctaatat 25869313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 391 - 516
Target Start/End: Complemental strand, 37014389 - 37014264
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    ||||||||||| |||| || | ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||| ||||| ||    
T  37014389 gtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggaga 37014290  T
Q  491 gttaacactaaatttatgaaacattg 516  Q
    |||||||||  ||||  |||||||||    
T  37014289 gttaacactcgatttgcgaaacattg 37014264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 484
Target Start/End: Complemental strand, 21489977 - 21489893
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaact 484  Q
    ||||||||||| |||||||||  ||||| |||||| ||  || ||||||||||||||||||||||||| ||||| ||| ||||||    
T  21489977 gtcaaacattcagattttaccagaaatcaagtttatcttcgaattgacacgattttggtacctaaaaatgtaaaatcaataaact 21489893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 28622507 - 28622566
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    |||| ||||| |||||||||||||||||||||||||||||  | ||||||||||||||||    
T  28622507 ccaaagttttgcaactcgagagtttacctcaactcgttttagctaggtaaactcgactcg 28622566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 16497751 - 16497833
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||||||||||||| | | ||||||||||||| ||  || || ||||  |||||| |||||||||||||||    
T  16497751 gtcaaactcgtcaaacattccgatttcagcaaaaatcgagtttatctttgaattaacacatttttggcacctaaaaacgtaaa 16497833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 37797459 - 37797517
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||||||| |||||||||||||||||||||||||||||  | || |||||||||||||    
T  37797459 caaggttttgcaactcgagagtttacctcaactcgttttacctagataaactcgactcg 37797517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 16801314 - 16801217
Alignment:
Q  148 actcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaatag 245  Q
    |||||| ||| |||||| ||| ||| || ||||||||||||||| || ||||||| ||| | ||| | |||||||| |||||||||||||| ||||||    
T  16801314 actcgaatcgtgaactcgtacaagtgtatctaaaattaaaattatataaaatttactatatgcattatatatgtaagctaatataatattgcaaatag 16801217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 32236886 - 32236926
Alignment:
Q  97 gccaaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  32236886 gccaaggttttacacctcgagagtttacctcaactcgtttt 32236926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 391 - 486
Target Start/End: Original strand, 28623182 - 28623277
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcg 486  Q
    |||||||||||||||| || | ||||||||  |||||||||||| ||| ||||| ||||| |||| | ||||||| ||||||| ||  ||||||||    
T  28623182 gtcaaactcgtcaaactttgcaattttaccagaaatcgagtttatctccgagttaacacgtttttagcacctaaacacgtaaactcgataaactcg 28623277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 25869454 - 25869420
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||||||||||||||||||||||||||||    
T  25869454 gttttacaactcgagagtttacctcaactcgtttt 25869420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 34909678 - 34909596
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||| |||||| ||||||||| ||| || | |||||||||||| || || ||||| |||||  |||||||||||||||    
T  34909678 gtcaaactcctcaaactttccgatttcaccaaagaccgagtttacctccgaattaacacgtttttgccacctaaaaacgtaaa 34909596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 25868876 - 25868803
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||| ||||||||| ||| |||| |||||||||||| ||||| ||||| |||||  |||||||||| ||||    
T  25868876 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacataaa 25868803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 31561420 - 31561485
Alignment:
Q  213 gacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaag 278  Q
    ||||||||||| |||||||||||||| ||||||   |||| || ||||||||||| ||||||||||    
T  31561420 gacatatgtaagctaatataatattgaaaataggtcaataatacaaaatatgacttaattataaag 31561485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2672069 - 2672140
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||||||||||| | ||||||| ||||||||| |||| |||| ||||    
T  2672069 tttatgtcattttacatttatcagctagttaaaccgttat-ttttaccaaacacttcagttagcttatcagct 2672140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11100108 - 11100037
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||| |||||  | |||||||| |||||||||||||| |||| ||||    
T  11100108 tttatgtcattttacatttatcagttagttgaaccg-ctaattttaccaaacacttcaattagcttatcagct 11100037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 19226339 - 19226232
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    |||||||||||||| |  ||||||||||||||||||||||  | | ||||| |||| | |  ||||| || || ||||||||||||| |||||| || ||    
T  19226339 ccaaggttttacaatttaagagtttacctcaactcgttttagctatgtaaattcgaattgtaaactcgtatgaatttacctaaaatt-aaattatatgaa 19226241  T
Q  198 atttattat 206  Q
    |||||||||    
T  19226240 atttattat 19226232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 36195726 - 36195810
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaa 228  Q
    |||||||||||| |  || || ||| |||||  ||||||||||||||| || ||||||||||| |||||||||||  ||||||||    
T  36195726 gtaaactcgacttgtaaattcatacaagtttgtctaaaattaaaattatataaaatttattatatacatgacatacttaaactaa 36195810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 37797539 - 37797614
Alignment:
Q  166 tacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    ||||||||||||||||||| |||||  ||  |||||||||| | ||| |||||||||| ||||||||||| ||||||    
T  37797539 tacgagtttacctaaaattgaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 37797614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 28622566 - 28622656
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataata 235  Q
    |||||||||| |||  ||||| ||||||||||||||||||| |||||  ||  |||||||||| | ||| |||||||||| || ||||||||    
T  28622566 gtaaactcgaatcgtaaactcgtacgagtttacctaaaattgaaattttatacaatttattatatgcat-acatatgtaagctgatataata 28622656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 32236946 - 32236989
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaa 187  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||    
T  32236946 gtaaactcgactcgtaaactcgtacgagtttacctaaaattaaa 32236989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 13999752 - 13999837
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaa 467  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||| |||  |||| |||||||||| |||||||||||    
T  13999752 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttatctcaaagttaacacgatttttgtacctaaaaa 13999837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 427 - 477
Target Start/End: Original strand, 24258534 - 24258584
Alignment:
Q  427 cgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattca 477  Q
    |||||||||||| ||||| ||||| |||||  |||||||||||||||||||    
T  24258534 cgagtttacctccgagtttacacgtttttgccacctaaaaacgtaaattca 24258584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 40013363 - 40013480
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||| || || |||| |||| ||||||||  ||| ||| |||||||| ||||| ||||||||||  ||| |||||| ||||| ||  ||    
T  40013363 gttaactc-agtcaatcttgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacttaaaaatgtaaactcggta 40013461  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  40013462 atctcggagagttaacact 40013480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5997372 - 5997315
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttca 58  Q
    ||||||| |||||||||||||||| ||||| ||||| | | ||||||| |||||||||    
T  5997372 tttatgtcattttacatttatcaactagttgaaccgctattttttaccaaacacttca 5997315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13947597 - 13947537
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaatta 62  Q
    ||||||||||||||| ||||| |||||||| ||||| || |||||| | |||||||||||||    
T  13947597 tttatgttattttacctttattaattagttgaaccg-ttaattttatcaaacacttcaatta 13947537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12363080 - 12363009
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||||| | ||||||| ||||||||| |||| |||| ||||    
T  12363080 tttatgtcattttacatttatcagctagttgaaccgttat-ttttaccaaacacttcagttagcttatcagct 12363009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14646840 - 14646769
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| ||||||||| ||||    
T  14646840 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagtttatcagct 14646769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27130989 - 27131060
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| ||||||||| ||||    
T  27130989 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagtttatcagct 27131060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 31408746 - 31408844
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagctt--agtcatcggtcagcagctataagc 98  Q
    ||||||| |||||| |||||| | |||||| |||||||  |||||||| || ||||||||||| |||| ||||   | |||||||||| |||||||||||    
T  31408746 tttatgtcattttatatttattagttagttgaaccgtta-attttaccaaatacttcaattagcttatcagctatcaatcatcggtcatcagctataagc 31408844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35235204 - 35235133
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| ||||||||| ||||    
T  35235204 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagtttatcagct 35235133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 391 - 455
Target Start/End: Original strand, 37798135 - 37798199
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgatttt 455  Q
    |||||||||||||||| || ||||||||||  |||| ||||||||||  ||||| ||||| ||||    
T  37798135 gtcaaactcgtcaaacttttcgattttaccagaaattgagtttacctttgagttaacacgttttt 37798199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 1e-64; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 104 - 312
Target Start/End: Complemental strand, 872289 - 872068
Alignment:
Q  104 ttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg-------------agaactcttacgagtttacctaaaattaaaatt 190  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||             ||||||| |||||||||||||||||||||||||    
T  872289 ttttacaactcaagagtttacctcaactcgttttgtctaggtaaactcgactcgtaaactcgactcgagaactcgtacgagtttacctaaaattaaaatt 872190  T
Q  191 acattaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccac 290  Q
    | |  || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||    
T  872189 aaaaaaattttattatttacatgagatatgtaaactaatataatattgtaaatagtccaatagtgcaaaatatgactaaattataaaggttttcaaccac 872090  T
Q  291 cgtaataaaacattatgttcaa 312  Q
    | ||||||||||||||||||||    
T  872089 cataataaaacattatgttcaa 872068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 98 - 290
Target Start/End: Complemental strand, 55166141 - 55165949
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    |||||||||||||| |  |||||||| |||||||| ||||||| ||||||||| || | |||||||| || |||||||| |||||||||||||| || ||    
T  55166141 ccaaggttttacaattttagagtttatctcaactcattttgtctaggtaaactagatttgagaactcgtatgagtttacttaaaattaaaattaaataaa 55166042  T
Q  198 atttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccac 290  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||    
T  55166041 atttattatttacatgacatatataaactaatataaaattgtaaatagtccaataatataaaatatgactaaattataaaggttttcaaccac 55165949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 99 - 313
Target Start/End: Complemental strand, 24454353 - 24454139
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||||| | | ||||||||| ||||||||||||||   || ||||||||||| |||||||| |||||||||| ||||||||||||||| || |||    
T  24454353 caaggttttacgattagagagtttagctcaactcgttttgcttagttaaactcgacttgagaactcgtacgagtttatctaaaattaaaattaaataaaa 24454254  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataa 298  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||  ||||||  | ||||||||||||||||||| ||| ||||||||| ||||||    
T  24454253 tttattatttacatgacatatgtaaactactgtaatattgaaaatagttcaatagtgcataatatgactaaattataaaagttttcaaccaccataataa 24454154  T
Q  299 aacattatgttcaat 313  Q
    | |||||||||||||    
T  24454153 agcattatgttcaat 24454139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 29509373 - 29509520
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    |||||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  29509373 ccaaggttttgcaactcgagagtttacctcaactaattttgtctaggtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatattaa 29509472  T
Q  198 atttattatttacatgacatatgtaaactaatataatattgtaaatag 245  Q
    ||||||||| | || ||||||||||| |||||||| ||||||||||||    
T  29509473 atttattatatgcaagacatatgtaagctaatatattattgtaaatag 29509520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 98 - 279
Target Start/End: Original strand, 46862256 - 46862437
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||||||||||||||||||||||||  ||    
T  46862256 ccaaggttttgcaactcgagagtttacctcaactcgttttgtctaggtaaattcgattcgagaactctgacgagtttacctaaaattaaaattacagaaa 46862355  T
Q  198 atttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg 279  Q
    ||||| ||| | || ||||||| ||| |||||||||||||||||||||   || | || ||||||||||| ||||| |||||    
T  46862356 atttactatatgcaagacatatataagctaatataatattgtaaataggtcaacaatacaaaatatgacttaattacaaagg 46862437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 99 - 273
Target Start/End: Original strand, 24965804 - 24965977
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||||||||| ||||||||||||| | || |||    
T  24965804 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgagaactcatacgagtttatctaaaattaaaataatataaaa 24965903  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaatta 273  Q
    |||||||| | |||||||||| | | |||||||||||||||||||||   ||||||  ||||||||||| |||||    
T  24965904 tttattatatgcatgacatatat-agctaatataatattgtaaataggtcaatagtgcaaaatatgacttaatta 24965977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 99 - 245
Target Start/End: Complemental strand, 32890665 - 32890519
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| || ||||| ||||||||||||||||||||||||||  |||||    
T  32890665 caaggttttgcaactcgagagtttacctcaactcgttttgtttaggtaaactcgacttgataactcgtacgagtttacctaaaattaaaattattttaaa 32890566  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatag 245  Q
    |||||||| | || || |||||||| |||||||| ||||||||||||    
T  32890565 tttattatatgcaagatatatgtaagctaatatattattgtaaatag 32890519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 100 - 242
Target Start/End: Original strand, 17503227 - 17503368
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaat 199  Q
    |||||||||||||| |||||||||||||||||| |||||   ||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||    
T  17503227 aaggttttacaacttgagagtttacctcaactcattttgcttaggtaaactcgactcgagaactcgtatgagtttacctaaaattaaaattaaataaaat 17503326  T
Q  200 ttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||||||| | ||||| ||||||||||||| ||||||||||    
T  17503327 ttattatttata-gacatttgtaaactaatatgatattgtaaa 17503368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 99 - 279
Target Start/End: Complemental strand, 50517882 - 50517702
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| || ||||||| ||||||||||||||| || |||    
T  50517882 caaggttttgcaactcgaaagtttacctcaactcattttgcctaggtaaactcgactcgagaactcatatgagtttatctaaaattaaaattatataaaa 50517783  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg 279  Q
    ||||| || | || ||||||| ||| ||||||||||||| |||||||   ||||||  ||||||||||| ||||| |||||    
T  50517782 tttatcatatgcaagacatatataagctaatataatattataaatagatcaatagtgcaaaatatgacttaattacaaagg 50517702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 377 - 508
Target Start/End: Complemental strand, 871909 - 871779
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| ||||||||||||||||||||| ||    
T  871909 ccgagttaactcgagtcaaactcgtcaaacattccgattttaccagaaatcgagtttacctccgagttgacacga-tttggtacctaaaaacgtaaactc 871811  T
Q  477 attaaactcggcgagttaacactaaatttatg 508  Q
      |||||||| ||||||||||||  |||||||    
T  871810 ggtaaactcgacgagttaacactcgatttatg 871779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 103 - 272
Target Start/End: Complemental strand, 12755093 - 12754922
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||| |||||||||||||||||||||||||| || |||||||    
T  12755093 gttttacaactcgagagtttacctcaactcgttttgcttaggtaaactcgactcgagacctcgtacgagtttacctaaaattaaaattatataaaattta 12754994  T
Q  203 ttatttacatgaca--tatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaatt 272  Q
    || | | |||| ||  ||| |||  ||||||||||||||||||||   ||||||  ||||||||||| ||||    
T  12754993 ttgtatgcatgccatgtatataaggtaatataatattgtaaataggtcaatagtgcaaaatatgacttaatt 12754922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 33141112 - 33140992
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||  |||||||||||||||||||| |||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||| || |||    
T  33141112 caaggttttgtaactcgagagtttacctcaattcgttttgtttaggtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaaa 33141013  T
Q  199 tttattatttacatgacatat 219  Q
    |||||||| | ||||||||||    
T  33141012 tttattatatgcatgacatat 33140992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 23670917 - 23671060
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||| ||||  | |  |||||||||||||  ||||| |||||||||||||| |||| |||||  ||  ||    
T  23670917 caaggttttacaactcgagagtttacctcaactcattttacctatataaactcgactcgtaaactcatacgagtttacctagaattgaaattttatacaa 23671016  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||||| | |||||||||||||| ||||||||||||||||||    
T  23671017 tttattatatccatgacatatgtaagctaatataatattgtaaa 23671060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 126 - 278
Target Start/End: Original strand, 26490616 - 26490767
Alignment:
Q  126 tcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaac 225  Q
    |||||||||||| |  |||||||||||| |||||||||| |||||||||||||||||||||||||| || || |||||||| | |||||||||| ||| |    
T  26490616 tcaactcgttttatttaggtaaactcgattcgagaactcatacgagtttacctaaaattaaaattatataaagtttattatatgcatgacatatataagc 26490715  T
Q  226 taatataatattgtaaatagtcaaatagtataaaatatgactaaattataaag 278  Q
    |||||| ||||||| |||||   |||||| |||||||||||| ||||| ||||    
T  26490716 taatatgatattgt-aataggttaatagtgtaaaatatgacttaattacaaag 26490767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 378 - 516
Target Start/End: Complemental strand, 55165624 - 55165486
Alignment:
Q  378 cgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattca 477  Q
    ||||||||||| ||||||||||||||||||||| |||||||||  ||||| ||||||||||  |||| | ||||||||||||| |||||||||||| |||    
T  55165624 cgagttaactcgagtcaaactcgtcaaacattctgattttaccataaatcaagtttacctccaagttaatacgattttggtacgtaaaaacgtaaactca 55165525  T
Q  478 ttaaactcggcgagttaacactaaatttatgaaacattg 516  Q
     |||||||| ||||||| ||||  |||| || |||||||    
T  55165524 gtaaactcgacgagttagcactcgatttgtggaacattg 55165486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 144 - 273
Target Start/End: Original strand, 53573698 - 53573827
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    ||||||||||||  ||||||| |||||||||||||| || |||||||| ||  |||||||||| | ||||||||||||||||||||||||||||||||||    
T  53573698 gtaaactcgacttaagaactcgtacgagtttacctagaaataaaattatatacaatttattatatgcatgacatatgtaaactaatataatattgtaaat 53573797  T
Q  244 agtcaaatagtataaaatatgactaaatta 273  Q
    ||   ||||||  ||||||||||| |||||    
T  53573798 agaacaatagtgcaaaatatgacttaatta 53573827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 25014120 - 25013988
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||  | | ||||||| || | |  ||||| |||||||||||||||||||||||||| || |||    
T  25014120 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaacttgaattgtaaactcgtacgagtttacctaaaattaaaattatataaaa 25014021  T
Q  199 tttattatttacatgacatatgtaaactaatat 231  Q
    |||||||| || || |||||| ||| |||||||    
T  25014020 tttattatatatataacatatttaagctaatat 25013988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 98 - 206
Target Start/End: Original strand, 41469635 - 41469743
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    |||| |||||||||||||||||||||||||||||||||||  | | ||||||||||||||  ||||| || ||||||||||||||||||||||| || ||    
T  41469635 ccaaagttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgactcgtaaactcgtatgagtttacctaaaattaaaattatataaa 41469734  T
Q  198 atttattat 206  Q
    |||||||||    
T  41469735 atttattat 41469743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 370 - 497
Target Start/End: Complemental strand, 24453987 - 24453867
Alignment:
Q  370 agtttacccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacg 469  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||       |||||||||||||||| |||||||||  |    
T  24453987 agtttacccgagttaactcgagtcaaactcgtcaaacattccaattttaccggaaatcgagttt-------agttgacacgattttgatacctaaaactg 24453895  T
Q  470 taaattcattaaactcggcgagttaaca 497  Q
    || ||||| |||| ||| ||||||||||    
T  24453894 tagattcaataaattcgacgagttaaca 24453867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 99 - 276
Target Start/End: Original strand, 41206719 - 41206908
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactc------------gactcgagaactcttacgagtttacctaaaattaa 186  Q
    |||||||||||||||| ||||||||||||||||||||||  | ||||||| ||            ||||||| ||||| ||||||||||| ||| |||||    
T  41206719 caaggttttacaactcaagagtttacctcaactcgttttacctaggtaaaatcaactcgaaaaccgactcgataactcgtacgagtttacttaatattaa 41206818  T
Q  187 aattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaata-gtcaaatagtataaaatatgactaaattataa 276  Q
    |||||  |  |||||||||| |||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||  |||||||    
T  41206819 aattatgtacaatttattatatacatgacatatgtaagctaatataatattgtaaatatgtc-aatattataaaatatgacttgattataa 41206908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 103 - 219
Target Start/End: Complemental strand, 26973106 - 26972990
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    |||||||||||||||||||| |||||||| ||||||   | ||||| | ||||||||||||| ||||||||||||| |||||||||||| || |||||||    
T  26973106 gttttacaactcgagagtttgcctcaacttgttttgcttaagtaaatttgactcgagaactcgtacgagtttaccttaaattaaaattatataaaattta 26973007  T
Q  203 ttatttacatgacatat 219  Q
    | |||| ||||| ||||    
T  26973006 tcatttgcatgatatat 26972990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 29469899 - 29469768
Alignment:
Q  110 aactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattattta 209  Q
    ||||||||||||||| || ||||||||| |  ||||||||||||||||  ||||| ||||||||||||||||||| |||||  ||  |||||||||| |     
T  29469899 aactcgagagtttacttcgactcgttttatttaggtaaactcgactcgtaaactcgtacgagtttacctaaaattgaaattttatacaatttattatatg 29469800  T
Q  210 catgacatatgtaaactaatataatattgtaaa 242  Q
    ||| |||||||||| ||||||||||| ||||||    
T  29469799 cat-acatatgtaagctaatataatactgtaaa 29469768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 41725657 - 41725566
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| |||||||||||| |||| |||||||||||||  |||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  41725657 gttaactc-agtcaaactcgttaaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaa 41725566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 49501199 - 49501307
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    ||||||||||| |||| |||||||||||||  ||| |||||||||||| ||||| |||||||||| ||||||||||||||||| ||  ||| ||||| ||    
T  49501199 gtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggaga 49501298  T
Q  491 gttaacact 499  Q
    |||||||||    
T  49501299 gttaacact 49501307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 49507264 - 49507372
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    ||||||||||| |||| |||||||||||||  ||| |||||||||||| ||||| |||||||||| ||||||||||||||||| ||  ||| ||||| ||    
T  49507264 gtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggaga 49507363  T
Q  491 gttaacact 499  Q
    |||||||||    
T  49507364 gttaacact 49507372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 40487063 - 40487170
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||||||| |||  ||||| |||||||||| ||| ||||||||||  || |||    
T  40487063 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgtacgagtttatctataattaaaattttataaaa 40487162  T
Q  199 tttattat 206  Q
    ||||||||    
T  40487163 tttattat 40487170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 8562509 - 8562611
Alignment:
Q  104 ttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttat 203  Q
    |||| ||| |||||||||||||||||||||||||  | | |||||||||| |||  ||||| |||||||||||||||||||||||||| || ||||||||    
T  8562509 ttttccaattcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgtacgagtttacctaaaattaaaattatataaaatttat 8562608  T
Q  204 tat 206  Q
    |||    
T  8562609 tat 8562611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 56423416 - 56423502
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaatta 185  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||||||| |||  ||||| ||||||||||||||||||||    
T  56423416 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgtacgagtttacctaaaatta 56423502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 29510083 - 29510191
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| ||| |||||||||  |||| |||||||| || ||||| ||||||||||| |||||||| ||||||| ||  ||||||||| ||    
T  29510083 gtcaaactcgtcaaaccttctgattttaccagaaattgagtttacatcagagttaacacgattttgatacctaaacacgtaaactcgataaactcggaga 29510182  T
Q  491 gttaacact 499  Q
    |||||||||    
T  29510183 gttaacact 29510191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 99 - 187
Target Start/End: Complemental strand, 40163405 - 40163317
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaa 187  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||||||| |||  ||||| || |||||||||||||||||||    
T  40163405 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgtaggagtttacctaaaattaaa 40163317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 381 - 516
Target Start/End: Complemental strand, 29856060 - 29855926
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  |||||||||||||||| ||||| |||||||||| |||| |||||||||||| ||  ||    
T  29856060 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaatcgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcggta 29855962  T
Q  481 aactcggcgagttaacactaaatttatgaaacattg 516  Q
    | ||||| || |||| |||  ||||||| |||||||    
T  29855961 atctcggagaattaatactcgatttatggaacattg 29855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 6487335 - 6487417
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  6487335 gtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 6487417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 98 - 278
Target Start/End: Complemental strand, 22480417 - 22480237
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    ||||||||||||||||||||||||||| |||||||   ||  | | ||||| ||||||||  ||||| ||  |||||| ||||||||||||||| | |||    
T  22480417 ccaaggttttacaactcgagagtttacttcaactctaattacctaagtaaattcgactcgtaaactcgtatcagtttatctaaaattaaaattata-taa 22480319  T
Q  198 atttattatttacatgacatatgtaaactaatat-aatattgtaaata-gtcaaatagtataaaatatgactaaattataaag 278  Q
    | ||| ||| |||||||||||||||| | ||||| ||||||||||||| ||| ||| ||  ||||||||||| ||||||||||    
T  22480318 acttactatatacatgacatatgtaagccaatataaatattgtaaatatgtc-aattgtgcaaaatatgacttaattataaag 22480237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 390 - 516
Target Start/End: Original strand, 49834499 - 49834625
Alignment:
Q  390 agtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcg 489  Q
    |||||||||||| |||| |||||||||||||  ||| |||||||||||| ||||| |||||||||| ||| ||||||||||||| ||  ||| ||  | |    
T  49834499 agtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtagctaaaaacgtaaactcggtaatcttagag 49834598  T
Q  490 agttaacactaaatttatgaaacattg 516  Q
    |||||||||| |||||| | |||||||    
T  49834599 agttaacactcaatttacggaacattg 49834625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 50517279 - 50517197
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| |||| ||||||||  ||||||||||||||||  |||| |||||||||||||||||||| |||||||    
T  50517279 gtcaaactcgtcaaaccttccaattttaccagaaatcgagtttacctcaaagttaacacgattttggtacctaaacacgtaaa 50517197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 23170111 - 23170220
Alignment:
Q  95 aagccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacat 194  Q
    ||||||| |||||||||||| |||||||| |||||||||||||    | |||||||||| |||  ||||| ||| |||||||||||||||||||||| ||    
T  23170111 aagccaaagttttacaactcaagagtttatctcaactcgttttacataagtaaactcgaatcggaaactcgtacaagtttacctaaaattaaaattatat 23170210  T
Q  195 taaatttatt 204  Q
     |||||||||    
T  23170211 aaaatttatt 23170220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 392 - 473
Target Start/End: Original strand, 23671392 - 23671473
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||||||| || |||||| |||  |||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  23671392 tcaaactcgtcaaacttttcgatttcaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaa 23671473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 204
Target Start/End: Complemental strand, 26449287 - 26449183
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||| ||||||||||||||||||||  | | ||||||| || |||  ||||| ||||||||||||||||||| |||||| || |||    
T  26449287 caaggttttacaactcgatagtttacctcaactcgttttagctatgtaaacttgaatcgtaaactcgtacgagtttacctaaaatt-aaattatataaaa 26449189  T
Q  199 tttatt 204  Q
    ||||||    
T  26449188 tttatt 26449183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 391 - 516
Target Start/End: Complemental strand, 29469249 - 29469124
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  29469249 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 29469150  T
Q  491 gttaacactaaatttatgaaacattg 516  Q
     || ||||   |||| ||||||||||    
T  29469149 attgacacgcgatttgtgaaacattg 29469124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 390 - 499
Target Start/End: Complemental strand, 32322602 - 32322493
Alignment:
Q  390 agtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcg 489  Q
    |||||||||||| || | |||||||||||||  ||| |||||||||||| || || |||||||||| ||||||||||||||||| ||  ||| ||||| |    
T  32322602 agtcaaactcgttaagccttccgattttaccagaaaccgagtttacctcagaattaacacgatttttgtacctaaaaacgtaaactcggtaatctcggag 32322503  T
Q  490 agttaacact 499  Q
    ||||||||||    
T  32322502 agttaacact 32322493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 33138877 - 33138804
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||| |||||||||||||  |||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  33138877 gtcaaaccttccgattttaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaa 33138804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 6486757 - 6486841
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaat 183  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||||||| ||   ||||| ||||||||||||||||||    
T  6486757 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcataaactcgtacgagtttacctaaaat 6486841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 8084295 - 8084188
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| ||||||||||||   |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  8084295 gtcaaactcgtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 8084196  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  8084195 gttgacac 8084188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 46286795 - 46286713
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| |||||| |||||   |||||||||||||||  | ||| ||||||||||||||||||||||||||||    
T  46286795 gtcaaactcgtcaaaccttccgagtttactagaaatcgagtttaccttagtgttaacacgattttggtacctaaaaacgtaaa 46286713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 381 - 505
Target Start/End: Complemental strand, 28484440 - 28484316
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacga-ttttggtacctaaaaacgtaaattcatt 479  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| |||||||||||| ||||| |||||| |||| ||||||||||||||||| ||  |    
T  28484440 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaacacgactttttgtacctaaaaacgtaaactcggt 28484342  T
Q  480 aaactcggcgagttaacactaaattt 505  Q
    || ||| | ||||||||||| |||||    
T  28484341 aatctcagagagttaacactcaattt 28484316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 32889979 - 32889874
Alignment:
Q  394 aaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagtt 493  Q
    ||||||||||||| ||| |||||||||  |||| |||||||| ||  |||| |||||||||||||||||||| ||||||| ||  |||| |||| |||||    
T  32889979 aaactcgtcaaaccttctgattttaccagaaattgagtttacatcaaagttaacacgattttggtacctaaacacgtaaactcggtaaattcggagagtt 32889880  T
Q  494 aacact 499  Q
    ||||||    
T  32889879 aacact 32889874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 368 - 473
Target Start/End: Complemental strand, 40162897 - 40162793
Alignment:
Q  368 cgagtttacccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaa 467  Q
    ||||||||| || ||||||||  |||||||||||||||| ||||||||| |||||||| |||||||| ||| || || ||||| |||||  |||||||||    
T  40162897 cgagtttacacgtgttaactcg-gtcaaactcgtcaaactttccgatttcaccgaaaaccgagtttatctccgaatttacacgtttttgccacctaaaaa 40162799  T
Q  468 cgtaaa 473  Q
    ||||||    
T  40162798 cgtaaa 40162793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 206
Target Start/End: Complemental strand, 9973507 - 9973405
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    |||||||||||| ||| ||||||||||||| ||||  | | |||||||||||||   ||||| ||||||||||||||||||| |||||| || |||||||    
T  9973507 gttttacaactcaagattttacctcaactcattttagctatgtaaactcgactcataaactcgtacgagtttacctaaaatt-aaattatataaaattta 9973409  T
Q  203 ttat 206  Q
    ||||    
T  9973408 ttat 9973405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 5800508 - 5800391
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| ||| ||| |||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  5800508 gttaactc-agtcaaactcgttaaaccttctgatgttaccagaaaccgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 5800410  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  5800409 atctcggagagttaacact 5800391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 9972859 - 9972777
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| |||| |||||||||||| ||||| ||||| |||||  |||||||||| ||||    
T  9972859 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttgccacctaaaaacataaa 9972777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 24966536 - 24966618
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||| ||||| |||| |||||||| |||| ||| ||||| || ||||| |||||||||||||||||||| |||||||    
T  24966536 gtcaaactcggcaaaccttcccattttaccaaaaaccgaatttacttccgagttaacacgattttggtacctaaacacgtaaa 24966618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 26491140 - 26491222
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||| |||||||||  ||| ||||||||||||  | || |||||||||||||||||||| |||||||    
T  26491140 gtcaaactcgtcaaaccttctgattttaccagaaaccgagtttacctcaaatttaacacgattttggtacctaaacacgtaaa 26491222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 27768608 - 27768491
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  27768608 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 27768510  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  27768509 atctcggagatttaacact 27768491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 389 - 499
Target Start/End: Original strand, 30967007 - 30967117
Alignment:
Q  389 tagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggc 488  Q
    ||||||||||||| |||| |||| ||||||||  ||| | | |||| ||| ||||| |||||||||| ||||||||||||||||| ||  ||| |||||     
T  30967007 tagtcaaactcgttaaaccttccaattttaccagaaaccaattttatctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcgga 30967106  T
Q  489 gagttaacact 499  Q
    |||||||||||    
T  30967107 gagttaacact 30967117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 42936980 - 42937078
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||||||| |||  ||||| ||||||| ||||||||||| |||||  ||  |||||||||| | |||| ||||||||||||||||||||| ||||||    
T  42936980 gtaaactcgaatcgtaaactcgtacgagtctacctaaaattgaaattttatacaatttattatatgcatggcatatgtaaactaatataatactgtaaa 42937078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 51967363 - 51967281
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| || |||||| ||| |||| |||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  51967363 gtcaaactcgtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 51967281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 8084950 - 8084893
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    |||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  8084950 aaggttttgcaactcgagagtttacctcaactcgttttatttaggtaaactcgactcg 8084893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4464924 - 4464853
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||||||||||||||||||| |||||| ||||| || |||||||| |||||||||||||| |||| ||||    
T  4464924 tttatgttattttacatttatcagttagttgaaccg-ttaattttaccgaacacttcaattagcttatcagct 4464853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 5441946 - 5441855
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| |||||    
T  5441946 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaa 5441855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 17503365 - 17503421
Alignment:
Q  256 taaaatatgactaaattataaaggttatcaaccaccgtaataaaacattatgttcaa 312  Q
    |||||||||||||||||||||||||| ||||||||| |||||||  |||||||||||    
T  17503365 taaaatatgactaaattataaaggttttcaaccaccataataaagtattatgttcaa 17503421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 4511416 - 4511491
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatat 219  Q
    ||||||||| || ||||| || |||||||||||||||||||||||||| || ||||||| ||| | ||||||||||    
T  4511416 gtaaactcgtcttgagaaatcgtacgagtttacctaaaattaaaattatataaaatttactatatgcatgacatat 4511491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 23987740 - 23987624
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| | | |||||||| ||||| |||||||||| ||||||||||||||||| ||  ||    
T  23987740 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccaa-tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggta 23987643  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| ||| |||||||    
T  23987642 atctcggagaggtaacact 23987624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 42937428 - 42937510
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| || ||||||||||  |||||||||||||||| ||||| | ||| |||| | ||||||| |||||||    
T  42937428 gtcaaactcgtcaaacttttcgattttaccagaaatcgagtttacctccgagttaaaacgcttttagcacctaaatacgtaaa 42937510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 467
Target Start/End: Complemental strand, 48261622 - 48261537
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaa 467  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| |||||||||||    
T  48261622 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaa 48261537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 54341686 - 54341569
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| || | ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  54341686 gttaactc-agtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagtttacacgatttttgtacctaaaaatgtaaactcgata 54341588  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  54341587 atctcggagatttaacact 54341569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 54561901 - 54561863
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||||||||||||||||||||||||||||||||    
T  54561901 caaggttttacaactcgagagtttacctcaactcgtttt 54561863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 56423992 - 56424074
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||| |||||| ||||||||| ||  |||| |||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  56423992 gtcaaactcatcaaactttccgatttcactaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 56424074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 408 - 473
Target Start/End: Complemental strand, 14334463 - 14334398
Alignment:
Q  408 ttccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||||| |||| | ||||||| || ||||| || |||||||||||||||||||||||||    
T  14334463 ttccgattttaccaaaaaacaagtttacgtccgagtttacgcgattttggtacctaaaaacgtaaa 14334398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 37828087 - 37828178
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||| ||||||| |||||    
T  37828087 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtatctaaaaatgtaaa 37828178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 40317095 - 40317170
Alignment:
Q  202 attatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaa 277  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||   ||||||  ||||||| ||| |||||||||    
T  40317095 attatatacatgacatatgtaagctaatataatattgcaaataggtcaatagtgcaaaatataacttaattataaa 40317170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 40327169 - 40327244
Alignment:
Q  202 attatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaa 277  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||   ||||||  ||||||| ||| |||||||||    
T  40327169 attatatacatgacatatgtaagctaatataatattgcaaataggtcaatagtgcaaaatataacttaattataaa 40327244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 51967819 - 51967780
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  51967819 ccaaggttttataactcgagagtttacctcaactcgtttt 51967780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 8563375 - 8563457
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| | | |||| |||||||| ||| ||||| ||||| |||||  | |||||||||||||    
T  8563375 gtcaaactcgtcaaactttccgatttcatcaaaaaccgagtttatctccgagttaacacgtttttgtcatctaaaaacgtaaa 8563457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 278
Target Start/End: Original strand, 21305775 - 21305909
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    |||||||||||||   ||||| || ||||||||| |||||||  |||| || ||||||||||| ||||| |||| ||||  ||||| |||||||  ||||    
T  21305775 gtaaactcgactcataaactcgtatgagtttacccaaaattatcattatataaaatttattatatacataacatttgtatgctaatgtaatattaaaaat 21305874  T
Q  244 agtcaaatagtataaaatatgactaaattataaag 278  Q
    || | ||| ||  ||||||||||  ||||||||||    
T  21305875 aggccaatggtgaaaaatatgacataattataaag 21305909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 21486601 - 21486519
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||| |||||  || |||| |||||||||||  ||||| ||||| |||||  |||||||||||||||    
T  21486601 gtcaaactcgtcaaactttctgatttctccaaaaaccgagtttaccttcgagtttacacggttttgccacctaaaaacgtaaa 21486519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 26448717 - 26448635
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| |||||  |||||||||| ||||| ||| | |||||  ||||||||| |||||    
T  26448717 gtcaaactcgtcaaactttccgatttcaccaaaaattaagtttacctccgagtttacatgtttttgccacctaaaaatgtaaa 26448635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 29965893 - 29965955
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattat 206  Q
    |||| |||||||||  ||||  |||||||||||||||||||||||||| || |||||||||||    
T  29965893 gtaatctcgactcgtaaactagtacgagtttacctaaaattaaaattatataaaatttattat 29965955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 50018736 - 50018619
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    ||||||||| ||||| ||| | |||| |||| ||||||||  ||| ||| |||||||| ||||| ||| |||||| ||||||||||| ||||| ||  ||    
T  50018736 gttaactct-gtcaatctctttaaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacctaaaaatgtaaactcggta 50018638  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  50018637 atctcggagagttaacact 50018619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 51321400 - 51321283
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| ||||||||| || |||| |||| ||||||||  ||| ||| ||||| || ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  51321400 gttaactc-agtcaaactggttaaaccttccaattttaccagaaaccgattttacgtcagagttaacacgatttttgtacctaaaaatgtaaactcgata 51321302  T
Q  481 aactcggcgagttaacact 499  Q
    |  |||| |||||||||||    
T  51321301 atatcggagagttaacact 51321283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 54561305 - 54561223
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||| |||||||| ||||||||| ||| |||| |||||||||||| ||||| ||| | |||||  ||||||||| |||||    
T  54561305 gtcaaacacgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacatgtttttgccacctaaaaatgtaaa 54561223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 54561843 - 54561782
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattat 206  Q
    ||||||||||||||  ||||| ||||||||||||||||||| |||||| || |||||||||||    
T  54561843 gtaaactcgactcgtaaactcgtacgagtttacctaaaatt-aaattatataaaatttattat 54561782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 477
Target Start/End: Original strand, 2326728 - 2326764
Alignment:
Q  441 agttgacacgattttggtacctaaaaacgtaaattca 477  Q
    |||| ||||||||||||||||||||||||||||||||    
T  2326728 agtttacacgattttggtacctaaaaacgtaaattca 2326764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 4511357 - 4511397
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttg 138  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  4511357 ccaaggttttgcaactcgagagtttacctcaactctttttg 4511397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 41470352 - 41470424
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaa 472  Q
    ||||||| |||| |||| ||| |||| |||||||||||| ||||| ||||| |||||  ||||||||||||||    
T  41470352 gtcaaactttccaatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaa 41470424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 42936921 - 42936960
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  42936921 ccaaggttttgcaactcgagagtttacctcaattcgtttt 42936960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 2326376 - 2326430
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||| ||||||| ||||||| |||||||||||||| | || |||||||||||||    
T  2326376 gttttgcaactcgcgagtttatctcaactcgttttgcctagataaactcgactcg 2326430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 29965839 - 29965873
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||||||| ||||||||||||||||||||    
T  29965839 gttttacaactcgaaagtttacctcaactcgtttt 29965873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 53573644 - 53573678
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgtttt 137  Q
    |||||||||||||||||||||||||||||| ||||    
T  53573644 gttttacaactcgagagtttacctcaactcatttt 53573678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 4390948 - 4390885
Alignment:
Q  9 attttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    |||||||||||||||  ||||| ||| | || |||||||| |||||||||||||| |||||||||    
T  4390948 attttacatttatcagctagttgaacagctt-attttaccaaacacttcaattagcttataagct 4390885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7707061 - 7707132
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| |||||||||||||| |||| ||||    
T  7707061 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcaattagcttatcagct 7707132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9031480 - 9031409
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||| ||||||| | | ||||| ||||||||| |||| |||| ||||    
T  9031480 tttatgtcattttacatttatcagttagttgaaccgttat-tcttaccaaacacttcagttagcttatcagct 9031409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 14335007 - 14334967
Alignment:
Q  110 aactcgagagtttacctcaactcgttttgtccaggtaaact 150  Q
    |||||||||||||||||||| | |||||||| |||||||||    
T  14335007 aactcgagagtttacctcaatttgttttgtctaggtaaact 14334967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18583513 - 18583584
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| |||| |||||||||    
T  18583513 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagcttataagct 18583584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25198789 - 25198718
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||| ||| ||| | ||||||| ||||||||| |||| |||| ||||    
T  25198789 tttatgtcattttacatttatcagttagttgaactgttat-ttttaccaaacacttcagttagcttatcagct 25198718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40120547 - 40120618
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||||||||   | |||||| | |||| ||||||||| |||||||||    
T  40120547 tttatgtcattttacatttatcagttagttaaacc-actaattttatcaaacatttcaattagcttataagct 40120618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43225200 - 43225129
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||||| | ||||||| ||||||||| |||| |||| ||||    
T  43225200 tttatgtcattttacatttatcagctagttgaaccgttat-ttttaccaaacacttcagttagcttatcagct 43225129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45780243 - 45780172
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||| ||||| | | ||||||| ||||||||| |||| |||| ||||    
T  45780243 tttatgtcattttacatttatcagttagttgaaccgctat-ttttaccaaacacttcagttagcttatcagct 45780172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 51967747 - 51967695
Alignment:
Q  173 ttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaac 225  Q
    ||||||||||||||||||| || ||||||||||| || ||  |||||||||||    
T  51967747 ttacctaaaattaaaattatataaaatttattatatatatagcatatgtaaac 51967695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 516
Target Start/End: Original strand, 54853143 - 54853267
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgag 491  Q
    |||||||||| |||| |||  |||||||   ||| ||| |||||||| ||||| |||| ||||| |||| |||||| ||||| ||  ||| ||||| |||    
T  54853143 tcaaactcgttaaaccttctaattttacgagaaaccgattttacctcagagttaacacaatttttgtacataaaaaggtaaactcggtaatctcggagag 54853242  T
Q  492 ttaacactaaatttatgaaacattg 516  Q
    ||||||||  |||| || |||||||    
T  54853243 ttaacactcgatttgtggaacattg 54853267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 55685617 - 55685680
Alignment:
Q  9 attttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    |||||||||||||||  ||||| || || || |||||||| |||||||||| |||||||||||||    
T  55685617 attttacatttatcagctagttgaatcgctt-attttaccaaacacttcaactagtttataagct 55685680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 56373106 - 56373177
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| ||||||||||||||| |||||| ||||| | | ||||||| ||||||||| | || |||||||||    
T  56373106 tttatgtcattttacatttatcagttagttgaaccgctat-ttttaccaaacacttcagtcagcttataagct 56373177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 56423500 - 56423552
Alignment:
Q  173 ttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaac 225  Q
    ||||||||||||||||||| || ||||||||||| || ||  |||||||||||    
T  56423500 ttacctaaaattaaaattatataaaatttattatatatatagcatatgtaaac 56423552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 1e-64; HSPs: 82)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 99 - 312
Target Start/End: Original strand, 3857860 - 3858073
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||  ||||||||||||||||||||||||  || |||  ||||||||| ||||| ||| |||||||||||||||||||| | || |||    
T  3857860 caaggttttacaacttaagagtttacctcaactcgttttgtttagataagttcgactcgaaaactcgtactagtttacctaaaattaaaatgaaataaaa 3857959  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataa 298  Q
    || ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||| ||||||    
T  3857960 ttcattatttacatgacatatgaaaactaatataatgttgtaaatagtccaatagtgcaaaatatgactaaattataaaggttttcaaccaccataataa 3858059  T
Q  299 aacattatgttcaa 312  Q
    |||||||| |||||    
T  3858060 aacattattttcaa 3858073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 99 - 280
Target Start/End: Original strand, 31846479 - 31846660
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| ||||||||||||||| |||||||| ||||| | |||||||||||||| |||||||| |||||||||||||||| ||||||||| || |||    
T  31846479 caaggttttgcaactcgagagtttatctcaactcattttgcctaggtaaactcgacttgagaactcgtacgagtttacctaaatttaaaattatataaaa 31846578  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggt 280  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||   ||||||  ||||||||||| ||||||||||||    
T  31846579 tttattatatgcatgacatatataaactaatataatattgtaaataggtcaatagtgcaaaatatgacttaattataaaggt 31846660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 100 - 312
Target Start/End: Complemental strand, 43618236 - 43618014
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacatt---- 195  Q
    ||||||||| |||||||||||||||||||| |  |||||   ||||||||||||||||||||||| |||||||||||||||||||||||||| | |        
T  43618236 aaggttttataactcgagagtttacctcaatttattttgcttaggtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattaaaattaaa 43618137  T
Q  196 --------aaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaac 287  Q
            |||||||||||||||||||||||||  |||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||| | |||    
T  43618136 attaaataaaatttattatttacatgacatatg--aactaatataatgttgtaaatagtccaatagtgtaaaatatgactaaattataaaggtttttaac 43618039  T
Q  288 caccgtaataaaacattatgttcaa 312  Q
    |||| ||||||| |||| |||||||    
T  43618038 caccataataaagcattttgttcaa 43618014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 103 - 278
Target Start/End: Complemental strand, 34343028 - 34342854
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    ||||||| ||||||||||||||||||||||||||||   ||||||||||||||| ||||||| ||||| |||||||||| ||||||||| || |||||||    
T  34343028 gttttacgactcgagagtttacctcaactcgttttgcttaggtaaactcgactcaagaactcgtacgaatttacctaaa-ttaaaattatataaaattta 34342930  T
Q  203 ttatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaag 278  Q
    |||| |||||||||||| |||||||||||||||||||||||||   |||| | |||||||||||| ||||| ||||    
T  34342929 ttatatacatgacatatataaactaatataatattgtaaataggtgaatattgtaaaatatgacttaattacaaag 34342854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 110 - 273
Target Start/End: Complemental strand, 42242576 - 42242413
Alignment:
Q  110 aactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattattta 209  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||||| |||||||||||||||||  | ||||||||||| |     
T  42242576 aactcgagagtttacctcaactcgctttgcctaggtaaactcgactcgagaactcgtacgagttgacctaaaattaaaattatgtaaaatttattatatg 42242477  T
Q  210 catgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaatta 273  Q
    |||||||||| ||| |||||||||||||||||||||   ||||||  ||||||||||| |||||    
T  42242476 catgacatatataagctaatataatattgtaaataggtcaatagtgcaaaatatgacttaatta 42242413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 104 - 273
Target Start/End: Complemental strand, 9731734 - 9731558
Alignment:
Q  104 ttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttat 203  Q
    ||||||||||||||||||||||| |||| |||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||    
T  9731734 ttttacaactcgagagtttaccttaacttgttttgcctaggtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaaatttat 9731635  T
Q  204 tat-------ttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaatta 273  Q
    |||        | |||||||||| ||| ||||||| |||||||||||||   ||||||  ||||||||||| |||||    
T  9731634 tatatgcataatgcatgacatatataagctaatatgatattgtaaataggtcaatagtgcaaaatatgacttaatta 9731558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 104 - 278
Target Start/End: Complemental strand, 40830415 - 40830241
Alignment:
Q  104 ttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttat 203  Q
    |||||||||||||||||||||||||||||||||||   | ||||||||||||  ||||||| ||||| ||||||||||||||||||||  | ||||||||    
T  40830415 ttttacaactcgagagtttacctcaactcgttttgcttaagtaaactcgacttcagaactcgtacgaatttacctaaaattaaaattatttaaaatttat 40830316  T
Q  204 tatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaag 278  Q
     || | |||||||||| ||| || ||||||||||||||||||   |||||| |||||| ||||| ||||| ||||    
T  40830315 gatatgcatgacatatataagctcatataatattgtaaataggtcaatagtgtaaaatgtgacttaattacaaag 40830241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 377 - 508
Target Start/End: Original strand, 3858423 - 3858554
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||||||  || |||||||||||||||    
T  3858423 ccgagttaactcgagttaaactcgtcaaacattccgattttaccaaaaatcgagtttaccttcaagttgacacaattttgacacttaaaaacgtaaattc 3858522  T
Q  477 attaaactcggcgagttaacactaaatttatg 508  Q
      | ||||||||||||||||||| ||||||||    
T  3858523 ggttaactcggcgagttaacactcaatttatg 3858554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 103 - 230
Target Start/End: Original strand, 32241803 - 32241931
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaatt-acattaaattt 201  Q
    |||||||| || |||||||||||||||||||||||  | ||||||||||||||||||||||| ||||| ||||||||||||||||||| |  ||  ||||    
T  32241803 gttttacatcttgagagtttacctcaactcgttttacctaggtaaactcgactcgagaactcgtacgaatttacctaaaattaaaattaattttttattt 32241902  T
Q  202 attatttacatgacatatgtaaactaata 230  Q
    |||||||||||||||||||||| ||||||    
T  32241903 attatttacatgacatatgtaagctaata 32241931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 377 - 473
Target Start/End: Complemental strand, 15926478 - 15926382
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||| |||||||||||||||||||| ||||||||||  |||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  15926478 ccgagttaactcgagtcaaactcgtcaaacattgcgattttaccagaaatcgagttaacctccgagttgacacgattttggtaccaaaaaacgtaaa 15926382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 144 - 279
Target Start/End: Original strand, 18726975 - 18727110
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa- 242  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |  |||||| || ||| ||||||||||||||||||     
T  18726975 gtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaaatttattatatggatgacaaatataagctaatataatattgtaaat 18727074  T
Q  243 tagtcaaatagtataaaatatgactaaattataaagg 279  Q
    ||||| ||||||  ||||||||||| ||||| |||||    
T  18727075 tagtc-aatagtgcaaaatatgacttaattacaaagg 18727110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 38295049 - 38295168
Alignment:
Q  126 tcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaac 225  Q
    ||||||| ||||||| |||| |||||||||||||||||  |||||||||||||||||||||||||| || ||||||||||| | ||||| |||| ||| |    
T  38295049 tcaactcattttgtctaggttaactcgactcgagaacttgtacgagtttacctaaaattaaaattatataaaatttattatatgcatgatatatataagc 38295148  T
Q  226 taatataatattgtaaatag 245  Q
    |||| |||||||||||||||    
T  38295149 taatttaatattgtaaatag 38295168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 391 - 516
Target Start/End: Original strand, 2308729 - 2308854
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||| ||||||| ||  |||||||||  ||| ||| |||||||| ||||| ||||||||||||||| |||||||||||||| | ||||||||||||    
T  2308729 gtcaaacttgtcaaactttttgattttaccacaaaccgaatttacctccgagttaacacgattttggtacataaaaacgtaaatttaataaactcggcga 2308828  T
Q  491 gttaacactaaatttatgaaacattg 516  Q
    |||||||||  |||||||||||||||    
T  2308829 gttaacactcgatttatgaaacattg 2308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 99 - 280
Target Start/End: Original strand, 2307868 - 2308047
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||||||||||||||||||| || ||||  |||||   ||||||||||||||||| |||||||||||||||||||| || |||||||| || |||    
T  2307868 caaggttttacaactcgagagtttatcttaacttattttgcttaggtaaactcgactcgataactcttacgagtttacctacaactaaaattatataaaa 2307967  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggt 280  Q
    |||||||| | |  | ||| | |||  ||||||||||||||||||||   ||||||  |||||||| || ||||| ||||||    
T  2307968 tttattatatgc--gccatgtataagttaatataatattgtaaataggtcaatagtgcaaaatatgtcttaattacaaaggt 2308047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 98 - 237
Target Start/End: Complemental strand, 32294810 - 32294667
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    ||||||||||||| ||  ||||||| ||||||||||||||| | | |||||||||| | |||||||| ||||||||||||| |||||||| | | || ||    
T  32294810 ccaaggttttacatcttaagagtttgcctcaactcgttttgcctaagtaaactcgagttgagaactcgtacgagtttaccttaaattaaattaaaataaa 32294711  T
Q  198 atttattatttacatgac----atatgtaaactaatataatatt 237  Q
    || |||||||||||||||    ||||||||||||||||||||||    
T  32294710 atatattatttacatgacatatatatgtaaactaatataatatt 32294667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 45160613 - 45160740
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    |||||||||||||||| ||||||||||||| ||||  | | |||||||||| |||  ||||| ||||||||||||||||||| |||||| || |||||||    
T  45160613 gttttacaactcgagaatttacctcaactcattttagctatgtaaactcgaatcgtaaactcgtacgagtttacctaaaatt-aaattatataaaattta 45160711  T
Q  203 ttatttacatgacatatgtaaactaatat 231  Q
    |||| || || |||||||||| |||||||    
T  45160712 ttatatatataacatatgtaagctaatat 45160740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 99 - 277
Target Start/End: Original strand, 43304588 - 43304766
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||  | | |||||||||| |||||||    |||||||||| |||| | || |  ||| |||||||||||||||||||||  ||  ||    
T  43304588 caaggttttacaacttaacaatttacctcaattcgttttacttaggtaaactcaactcaaaaatttatacaagtttacctaaaattaaaattctatataa 43304687  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaa 277  Q
    |||||||| | |||||||| || ||||||||||||||||||||||||   || |||  ||||||||||| |||||||||    
T  43304688 tttattatatgcatgacatttgcaaactaatataatattgtaaatagatcaacagtgcaaaatatgacttaattataaa 43304766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 391 - 499
Target Start/End: Complemental strand, 15224316 - 15224208
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| || |||||| |||  |||||||||||||||| ||||| |||||||||||||||||||| ||||||| |   ||||||||| |     
T  15224316 gtcaaactcgtcaaacttttcgatttcaccagaaatcgagtttacctctgagttaacacgattttggtacctaaacacgtaaaattggtaaactcggagt 15224217  T
Q  491 gttaacact 499  Q
    |||||||||    
T  15224216 gttaacact 15224208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 381 - 516
Target Start/End: Complemental strand, 10657974 - 10657840
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| ||| |||||||| |||| |||| |||||||| |||||||| |||||||| ||||| |||||||||| ||||||||||||||||| ||  ||    
T  10657974 gttaactc-agttaaactcgttaaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggta 10657876  T
Q  481 aactcggcgagttaacactaaatttatgaaacattg 516  Q
    | ||| | |||||||||||  ||||| | |||||||    
T  10657875 atctcagagagttaacactcgatttacggaacattg 10657840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 378 - 473
Target Start/End: Complemental strand, 32294011 - 32293917
Alignment:
Q  378 cgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||| ||||||||||||||||||||||||||||||   ||||| ||||||| || || || |||||||||||||||| |||||||||||    
T  32294011 cgagttaactcgagtcaaactcgtcaaacattccgattttacaagaaatccagtttacatcagatttaacacgattttggtacc-aaaaacgtaaa 32293917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 38411938 - 38412021
Alignment:
Q  104 ttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaa 187  Q
    ||||||||||||||||||||||||||||||||||  | | |||||||||| |||  ||||| ||||||||||||||||||||||    
T  38411938 ttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgtacgagtttacctaaaattaaa 38412021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 144 - 278
Target Start/End: Complemental strand, 24026515 - 24026381
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    ||||||||||||||  ||| | |||||| ||||||||| |||||| || || ||||||| ||| |||||||||||||||| |||| |||||| |||||||    
T  24026515 gtaaactcgactcgtaaacccatacgagattacctaaagttaaaaatatataaaatttactatatacatgacatatgtaagctaacataatactgtaaat 24026416  T
Q  244 agtcaaatagtataaaatatgactaaattataaag 278  Q
    || | |||||   ||||||||||  ||||||||||    
T  24026415 aggctaatagcgcaaaatatgacacaattataaag 24026381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 35404334 - 35404416
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| |||| |||||||| |||| ||||||||||||  |||| ||||||||| ||||||||||||||||||    
T  35404334 gtcaaactcgtcaaactttccaattttaccaaaaaccgagtttacctctaagttaacacgatttcggtacctaaaaacgtaaa 35404416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 37810300 - 37810401
Alignment:
Q  177 ctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataa 276  Q
    ||||||||||||||| || |||||||||||  ||||||||||||||  |||||||||||||||| ||||   |||| | |||||||||||| ||||||||    
T  37810300 ctaaaattaaaattatataaaatttattatacacatgacatatgtatgctaatataatattgtatataggtcaatattgtaaaatatgacttaattataa 37810399  T
Q  277 ag 278  Q
    ||    
T  37810400 ag 37810401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 204
Target Start/End: Complemental strand, 41979494 - 41979389
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||||||||| |||||||||||||||||||||||  | |  |||| |||| ||   ||||| |||||||||||||||||||||||||| || |||    
T  41979494 caaggttttacaacttgagagtttacctcaactcgttttaactatataaattcgaatcataaactcgtacgagtttacctaaaattaaaattatataaaa 41979395  T
Q  199 tttatt 204  Q
    ||||||    
T  41979394 tttatt 41979389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 99 - 187
Target Start/End: Complemental strand, 33263547 - 33263459
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaa 187  Q
    ||||||||||||||||||||||||||||||||| |||||  | | |||||||||| |||  ||||| ||||| ||||||||||||||||    
T  33263547 caaggttttacaactcgagagtttacctcaacttgttttagctatgtaaactcgaatcgtaaactcatacgaatttacctaaaattaaa 33263459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 476
Target Start/End: Complemental strand, 379474 - 379380
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||| |||||||||||| || | ||||||||||| | |||| ||| |||||||| ||||| |||||||||| ||||||||||||||||||||    
T  379474 gttaactc-agtcaaactcgttaagccttccgattttatcaaaaaccgaatttacctcagagttaacacgatttttgtacctaaaaacgtaaattc 379380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 498
Target Start/End: Original strand, 18899943 - 18900050
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| ||||||||||||   |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  18899943 gtcaaactcgtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 18900042  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  18900043 gttgacac 18900050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 499
Target Start/End: Original strand, 28739927 - 28740069
Alignment:
Q  357 ttcgatttactcgagtttaccc-gagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgatttt 455  Q
    ||||| |||| ||||||||||  | |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| ||||||||||    
T  28739927 ttcgagttacacgagtttaccgagtgttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttt 28740025  T
Q  456 ggtacctaaaaacgtaaattcattaaactcggcgagttaacact 499  Q
     |||||||||||| |||| ||  ||| ||||| |||||||||||    
T  28740026 tgtacctaaaaacataaactcggtaatctcggagagttaacact 28740069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 473
Target Start/End: Original strand, 32242208 - 32242303
Alignment:
Q  378 cgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||| |||||||||||| |||||||| ||||||||   ||||| |||||||||| ||||| |||||||||||||| || |||| |||||    
T  32242208 cgagttaactcgagtcaaactcgttaaacattctgattttacaagaaatcaagtttacctcagagttaacacgattttggtatctcaaaatgtaaa 32242303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 13898562 - 13898480
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||||| |||||   ||||||||||||||    
T  13898562 gtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaa 13898480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 14039179 - 14039097
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||||| |||||   ||||||||||||||    
T  14039179 gtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaa 14039097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 473
Target Start/End: Complemental strand, 33262962 - 33262857
Alignment:
Q  368 cgagtttacc-cgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaa 466  Q
    |||||||||| || |||||||| ||||||||||||||||| ||||||||| ||| |||| |||||||||||  ||||| ||||| |||||  ||||||||    
T  33262962 cgagtttaccacgtgttaactc-agtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttaccttcgagtttacacgtttttgccacctaaaa 33262864  T
Q  467 acgtaaa 473  Q
    |||||||    
T  33262863 acgtaaa 33262857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 38413469 - 38413551
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| |||| |||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  38413469 gtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttgccacctaaaaacgtaaa 38413551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 473
Target Start/End: Complemental strand, 33136153 - 33136069
Alignment:
Q  389 tagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| |||| |||| |||||||| ||||  |||||||||||||||| ||||| |||||||||| |||||||||||| ||||    
T  33136153 tagtcaaattcgttaaaccttccgattataccagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacataaa 33136069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 382 - 473
Target Start/End: Original strand, 1833712 - 1833803
Alignment:
Q  382 ttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||| |||||||||||  ||||||||  ||||||||  ||||||| ||||||||  | |||||||||||||| ||||||||||||||||    
T  1833712 ttaactcgagtcaaactcgataaacattcttattttaccagaaatcgaatttacctccaaattgacacgattttgttacctaaaaacgtaaa 1833803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 487
Target Start/End: Complemental strand, 3575385 - 3575280
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| ||| |||||| ||||||||||||||||| ||| ||    
T  3575385 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacctaaaaacgtaaactcagta 3575287  T
Q  481 aactcgg 487  Q
    | |||||    
T  3575286 atctcgg 3575280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 3991859 - 3991777
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| || |||||| ||| |||| |||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  3991859 gtcaaactcgtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 3991777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 6224235 - 6224352
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| ||||||||||||   ||| |||||| ||||  ||||| |||||||||  ||||||||||||||||| ||  ||    
T  6224235 gttaactc-agtcaaactcgttaaaccttccgattttactagaaaccgagttcacctaagagttaacacgatttgtgtacctaaaaacgtaaactcgata 6224333  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  6224334 atctcggagagttaacact 6224352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 28845129 - 28845012
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| |||||| |  ||| ||| |||||||| ||||| |||||||||| |||||||||||| |||| ||  ||    
T  28845129 gttaactc-agtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacataaactcgata 28845031  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  28845030 atctcggagagttaacact 28845012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 428 - 505
Target Start/End: Original strand, 214961 - 215038
Alignment:
Q  428 gagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacactaaattt 505  Q
    ||||||||||  ||||| |||||||||||||||||||||||||||||||  ||| |||||  |||||||||| |||||    
T  214961 gagtttaccttagagttaacacgattttggtacctaaaaacgtaaattcggtaatctcggaaagttaacactcaattt 215038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 391 - 476
Target Start/End: Original strand, 11153365 - 11153450
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||| |||||||  ||||||||||  ||| |||||||||||| ||||| |||||||||  | ||||||||||||||||||    
T  11153365 gtcaaactcgccaaacatctcgattttaccagaaaccgagtttacctccgagttaacacgatttcagcacctaaaaacgtaaattc 11153450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 15224714 - 15224641
Alignment:
Q  169 gagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||||||||||||| |||||  ||  |||||||||| | |||||||||||||| ||||||||||||||||||    
T  15224714 gagtttacctaaaattgaaattttatacaatttattatatgcatgacatatgtaagctaatataatattgtaaa 15224641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 28546398 - 28546289
Alignment:
Q  170 agtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaa 269  Q
    |||||||||||||||||||||| || ||||||||||| ||| | |||||  ||| |||||| ||||||| ||||||   |||| | |||||||||||| |    
T  28546398 agtttacctaaaattaaaattatataaaatttattatatacctaacatacataagctaatagaatattgcaaataggtcaataatgtaaaatatgactta 28546299  T
Q  270 attataaagg 279  Q
    ||| ||||||    
T  28546298 attctaaagg 28546289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 37790427 - 37790329
Alignment:
Q  145 taaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    |||||||||||||  || || ||||||||||| ||||| |||||||| |||||| ||||||| || ||||||||  || |||||||||||| ||||||||    
T  37790427 taaactcgactcgtaaaatcgtacgagtttacgtaaaagtaaaattatattaaaattattatatagatgacata--tatactaatataatactgtaaata 37790330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 18177815 - 18177724
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||| ||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| |||||    
T  18177815 gttaactct-gtcaaactcgttaaactttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaa 18177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 18899243 - 18899302
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    |||| ||||| |||||||||||||||||||||||||||||  | ||||||||||||||||    
T  18899243 ccaaagttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 18899302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 25288697 - 25288594
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgag 491  Q
    |||||| ||| |||| ||||||||||||   ||| |||||||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||| ||||| |||    
T  25288697 tcaaacccgttaaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagag 25288598  T
Q  492 ttaa 495  Q
    ||||    
T  25288597 ttaa 25288594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 30851442 - 30851383
Alignment:
Q  143 ggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    |||||| ||||||||||||||| || ||||||||||||||||||||||| || |||||||    
T  30851442 ggtaaagtcgactcgagaactcgtatgagtttacctaaaattaaaattatataaaattta 30851383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 515
Target Start/End: Complemental strand, 40829722 - 40829596
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaa--ctcggc 488  Q
    |||||| ||||||||| || | ||||||||  ||| |||||||||||| ||||| ||||||||||| |||||||||| ||| | ||  ||||  |||||     
T  40829722 gtcaaattcgtcaaacctttctattttaccagaaaccgagtttacctccgagttaacacgattttgatacctaaaaatgtagactcggtaaactctcgga 40829623  T
Q  489 gagttaacactaaatttatgaaacatt 515  Q
    ||||||||||| |||||| | ||||||    
T  40829622 gagttaacactcaatttacggaacatt 40829596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 44880468 - 44880534
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttat 68  Q
    ||||||| |||||||||||||||||||||| ||||| || |||||||| ||||||| |||||||||||    
T  44880468 tttatgtcattttacatttatcaattagtttaaccg-ttaattttaccaaacactttaattagtttat 44880534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 7027447 - 7027330
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| || | ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  7027447 gttaactc-agtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 7027349  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  7027348 atctcggagatttaacact 7027330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 13908693 - 13908631
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattat 206  Q
    ||||||||||||||  || || |||||||||||||||||||||||||| || |||||||||||    
T  13908693 gtaaactcgactcgtaaattcgtacgagtttacctaaaattaaaattatataaaatttattat 13908631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 19948624 - 19948542
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| ||||  ||||||||||| ||||| ||||| |||||  ||||||||| |||||    
T  19948624 gtcaaactcgtcaaactttccgatttcaccaaaaactgagtttacctccgagttaacacgtttttgccacctaaaaatgtaaa 19948542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 467
Target Start/End: Complemental strand, 26789329 - 26789244
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaa 467  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| |||||||||||    
T  26789329 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaa 26789244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 13833077 - 13833168
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| ||||||||| || |||  ||| ||||||||   |||| ||||||||||| ||||| |||||||||| |||||||||||||||||    
T  13833077 gttaactc-agtcaaacttgttaaatcttctgattttactagaaattgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaa 13833168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 35403978 - 35404033
Alignment:
Q  152 gactcgagaactcttacgagtttacctaaaatt-aaaattacattaaatttattat 206  Q
    ||||||||||||| | ||||||||||||||||| |||||||||| |||||||||||    
T  35403978 gactcgagaactcgtgcgagtttacctaaaattaaaaattacataaaatttattat 35404033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4385182 - 4385113
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataag 71  Q
    ||||||| |||||||||||||||||||||| ||||| | | ||||||| ||||||||| |||| |||||||    
T  4385182 tttatgtcattttacatttatcaattagttgaaccgctat-ttttaccaaacacttcagttagcttataag 4385113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 13908751 - 13908713
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  13908751 caaggttttacaattcgagagtttacctcaactcgtttt 13908713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 18899302 - 18899399
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||||||| |||  ||||| ||||||||||| ||||||| |||||  ||  |||||||||| |  || |||||||||||||||||||||| ||||||    
T  18899302 gtaaactcgaatcgtaaactcgtacgagtttacttaaaattgaaattttatacaatttattatatgtat-acatatgtaaactaatataatactgtaaa 18899399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 475
Target Start/End: Complemental strand, 24025943 - 24025850
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaatt 475  Q
    |||||||| |||| || ||||||||||||| ||||||||| |||| |||||||| |||  |||| ||||| |||||  |||||||||| ||||||    
T  24025943 gttaactc-agtccaattcgtcaaacattctgattttaccaaaaaccgagtttatctccaagttaacacgtttttgacacctaaaaacttaaatt 24025850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 41978923 - 41978841
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| | | |||| |||||||||||| || || ||| | |||||  |||||||||||||||    
T  41978923 gtcaaactcgtcaaactttccgatttcatcaaaaaccgagtttacctccgaattaacatgtttttgccacctaaaaacgtaaa 41978841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 12520367 - 12520314
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcg 152  Q
    ||||||||| ||||| |||||||||||||||||||||||| | |||||| ||||    
T  12520367 caaggttttgcaacttgagagtttacctcaactcgttttgcctaggtaagctcg 12520314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 12877763 - 12877690
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||| ||||||||| | | |||| |||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  12877763 gtcaaactttccgatttcatcaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 12877690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 15926726 - 15926689
Alignment:
Q  150 tcgactcgagaactcttacgagtttacctaaaattaaa 187  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  15926726 tcgactcgagaactcgtacgagtttacctaaaattaaa 15926689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 30850333 - 30850272
Alignment:
Q  412 gattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||| |||| ||| |||||||| ||||| | |||||||||| |||||||||||||||    
T  30850333 gattttaccaaaaaacgaatttacctccgagtttatacgattttggcacctaaaaacgtaaa 30850272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 31847237 - 31847342
Alignment:
Q  395 aactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgt-aaattcattaaactcggcgagtt 493  Q
    |||||||||||| ||| ||||||| |  |||| ||||||||||| |||||  || ||||||  ||||||||||||| ||| ||  ||||||||| |||||    
T  31847237 aactcgtcaaaccttctgattttatcagaaatagagtttacctccgagttaccatgattttaatacctaaaaacgtaaaactcgataaactcggagagtt 31847336  T
Q  494 aacact 499  Q
    ||||||    
T  31847337 aacact 31847342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 391 - 472
Target Start/End: Original strand, 37810898 - 37810979
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaa 472  Q
    ||||||||| |||||||||  ||||| ||| |||||| |||||||||| || || ||||| |||||| | ||||||||||||    
T  37810898 gtcaaactcatcaaacattatgatttcaccaaaaatcaagtttacctccgatttaacacgtttttggcatctaaaaacgtaa 37810979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4056570 - 4056641
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||||||||||||||||||| | |||| ||||| || |||||||| ||||||| |||||| |||| ||||    
T  4056570 tttatgttattttacatttatcagtcagttgaaccg-ttaattttaccaaacactttaattagcttatcagct 4056641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 38147429 - 38147485
Alignment:
Q  177 ctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataa 233  Q
    |||||||| |||||| || ||||||||||| ||||||||| || |||||||||||||    
T  38147429 ctaaaatttaaattatataaaatttattatatacatgacaaatataaactaatataa 38147485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 2104353 - 2104286
Alignment:
Q  166 tacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataa 233  Q
    |||||||||| ||||||||||||||| || | ||||||||| ||  ||| |||||||| |||||||||    
T  2104353 tacgagtttatctaaaattaaaattatataatatttattatatatgtgatatatgtaagctaatataa 2104286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 18727665 - 18727732
Alignment:
Q  394 aaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacc 461  Q
    ||||||||||||| ||  |||||||||  || ||||||||||||| ||||| ||||| ||||||||||    
T  18727665 aaactcgtcaaactttttgattttaccagaattcgagtttacctccgagttaacacggttttggtacc 18727732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 35403912 - 35403970
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    |||| |||| ||||| |||||||||||||||||||||||    ||||||||||||||||    
T  35403912 caagattttgcaacttgagagtttacctcaactcgttttacataggtaaactcgactcg 35403970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 37654841 - 37654887
Alignment:
Q  231 taatattgtaaatagtcaaatagtataaaatatgactaaattataaa 277  Q
    ||||||||||||||||  ||||||| ||||||||||| |||||||||    
T  37654841 taatattgtaaatagttcaatagtacaaaatatgacttaattataaa 37654887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 449
Target Start/End: Original strand, 45161152 - 45161206
Alignment:
Q  395 aactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacac 449  Q
    |||||||||||| ||||||||| ||| |||| |||||||||||| ||||| ||||    
T  45161152 aactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacac 45161206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 18726919 - 18726956
Alignment:
Q  101 aggttttacaactcgagagtttacctcaactcgttttg 138  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  18726919 aggttttgcaacttgagagtttacctcaactcgttttg 18726956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 432
Target Start/End: Original strand, 43318776 - 43318817
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtt 432  Q
    |||||||||||||||| ||||||||||||| ||||| |||||    
T  43318776 gtcaaactcgtcaaactttccgattttaccaaaaatagagtt 43318817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2265624 - 2265553
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| |||||||||||||| |||| ||||    
T  2265624 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcaattagcttatcagct 2265553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6153142 - 6153071
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    |||||||||||||||||||||||  ||||| ||||| | | ||||||| || |||||| ||||||||| ||||    
T  6153142 tttatgttattttacatttatcagctagttgaaccgctat-ttttaccaaatacttcagttagtttattagct 6153071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 13327675 - 13327719
Alignment:
Q  142 aggtaaactcgactcgagaactcttacgagtttacctaaaattaa 186  Q
    |||||| |||||||||  ||||| |||||||||||||||||||||    
T  13327675 aggtaatctcgactcgtaaactcgtacgagtttacctaaaattaa 13327719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13350757 - 13350686
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||||||||||||||||| |  ||||| ||||||| | ||||||| ||||||||| |||| |||| ||||    
T  13350757 tttatgttattttacatttattagctagttgaaccgttat-ttttaccaaacacttcagttagcttatcagct 13350686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18710840 - 18710911
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| |||| |||||||||    
T  18710840 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagcttataagct 18710911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 4e-58; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 99 - 313
Target Start/End: Complemental strand, 35880152 - 35879938
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||||| | | ||||||||| ||||||||||||||   || ||||||||||| |||||||| |||||||||| ||||||||||||||| || |||    
T  35880152 caaggttttacgattagagagtttagctcaactcgttttgcttagttaaactcgacttgagaactcgtacgagtttatctaaaattaaaattaaataaaa 35880053  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataa 298  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||  ||||||  | ||||||||||||||||||| ||| ||||||||| ||||||    
T  35880052 tttattatttacatgacatatgtaaactactgtaatattgaaaatagttcaatagtgcataatatgactaaattataaaagttttcaaccaccataataa 35879953  T
Q  299 aacattatgttcaat 313  Q
    | |||||||||||||    
T  35879952 agcattatgttcaat 35879938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 99 - 312
Target Start/End: Complemental strand, 24067587 - 24067375
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||  |||||| |||| |||| ||||||| |||||||||| || |||||||||| ||  |||||| ||||||||||||||| || |||    
T  24067587 caaggttttacaactaaagagtt-accttaactagttttgttcaggtaaacttgattcgagaactcatataagtttatctaaaattaaaattaaataaaa 24067489  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataa 298  Q
    |||||||||||||||| |||| || |||||||||||||||||||||||  ||||||  |||||||||||| |||||||||||| ||||||||| ||||||    
T  24067488 tttattatttacatgatatatatagactaatataatattgtaaatagttcaatagtgcaaaatatgactacattataaaggttttcaaccaccataataa 24067389  T
Q  299 aacattatgttcaa 312  Q
    | ||||||||||||    
T  24067388 atcattatgttcaa 24067375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 18985120 - 18984939
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    |||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||| || ||    
T  18985120 ccaaggttttgcaactcgagagtttacctcaacttgttttgtctaggtaaacttgactcgagaactcgcacgagtttacctaaaattaaaattatataaa 18985021  T
Q  198 atttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg 279  Q
    ||||||||| | || ||||||| ||| |||||||||||||||||||||   |||||| ||||| |||||||||||| |||||    
T  18985020 atttattatgtgcaagacatatataagctaatataatattgtaaataggtcaatagtgtaaaacatgactaaattacaaagg 18984939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 99 - 273
Target Start/End: Original strand, 8029166 - 8029340
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||||||||||||||||||| || |||    
T  8029166 caaggttttgcaactcgagagtttacctcaactcgtttcgcctaggtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaaa 8029265  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaatta 273  Q
    |||| ||| | || ||||||| ||| |||||||||||||||||||||   ||||||  ||||||||||| |||||    
T  8029266 tttactatatgcaagacatatataagctaatataatattgtaaataggtcaatagtgcaaaatatgacttaatta 8029340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 99 - 245
Target Start/End: Complemental strand, 42423994 - 42423848
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| ||||| ||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  42423994 caaggttttgcaacttgagagtttacctcaactcgttttgcttaggtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatattaaa 42423895  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatag 245  Q
    |||||||| | || |||| |||||| |||||||| ||||||||||||    
T  42423894 tttattatatgcaagacacatgtaagctaatatattattgtaaatag 42423848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 99 - 266
Target Start/End: Complemental strand, 41394652 - 41394485
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||  |||||| |||||| || |||    
T  41394652 caaggttttacaactcgagagtttacctcaactcgttttgcttaggtaaactcgactcgagaactcgtacgagtttacaaaaaatttaaattatataaaa 41394553  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgac 266  Q
    |||||||| | |||||||| | ||| |||||||||||||||||||||   ||||||  ||||||||||    
T  41394552 tttattatatgcatgacatgtataacctaatataatattgtaaataggtcaatagtgcaaaatatgac 41394485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 103 - 279
Target Start/End: Complemental strand, 24082972 - 24082798
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    ||||| |||||||||||||||||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||||    
T  24082972 gttttgcaactcgagagtttacctcaactcgttttgcctaggtaaactcgactagagaactcgtacgagtttacctaaaattaatattatataaaattta 24082873  T
Q  203 ttatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg 279  Q
    |||| | |||||||||  |||  |||||||||||||||||||| | |||| |  ||||||||||| ||||| |||||    
T  24082872 ttatatgcatgacata--taagttaatataatattgtaaataggccaataatgcaaaatatgacttaattacaaagg 24082798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 100 - 279
Target Start/End: Original strand, 12737396 - 12737576
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacat-taaa 198  Q
    |||||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||| || |||||||| ||||||||| ||||||| ||  |||    
T  12737396 aaggttttacaattcgagagtttacctcaactcgttttgcttaggtaaactcgactcgagaagtcgtacgagttaacctaaaatgaaaattatataaaaa 12737495  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg 279  Q
    |||||||| | |||||||||| ||| ||||||||||||||||||||    ||||||  ||||||||||| ||||| |||||    
T  12737496 tttattatatgcatgacatatataagctaatataatattgtaaatatatcaatagtgcaaaatatgacttaattacaaagg 12737576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 377 - 497
Target Start/End: Complemental strand, 17234814 - 17234694
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||| | |||||||||||||||||||| ||| |     
T  17234814 ccgagttaactcgagtcaaactcgtcaaacattccgattttaccagaaatcgagtttacctccgagttgataggattttggtacctaaaaacgcaaactt 17234715  T
Q  477 attaaactcggcgagttaaca 497  Q
      ||||||| |||||||||||    
T  17234714 ggtaaactcagcgagttaaca 17234694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 111 - 245
Target Start/End: Original strand, 12521731 - 12521864
Alignment:
Q  111 actcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttac 210  Q
    |||||||||||||||||||||| ||||| | |||||||||||| |||||||||| | |||||||||||||||||||||||| | |||||||||| | | |    
T  12521731 actcgagagtttacctcaactcattttgccaaggtaaactcgattcgagaactcgtgcgagtttacctaaaattaaaattata-taaatttattttattc 12521829  T
Q  211 atgacatatgtaaactaatataatattgtaaatag 245  Q
    ||| ||||| ||| ||||||| |||||||||||||    
T  12521830 atggcatatataagctaatatgatattgtaaatag 12521864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 99 - 244
Target Start/End: Original strand, 3007131 - 3007277
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaat-tacattaa 197  Q
    |||||||||||||||||||||||||||||||||||||||| | ||  |||||||| ||||||| || ||||||||||||||||||||||||  | || ||    
T  3007131 caaggttttacaactcgagagtttacctcaactcgttttgcctagcaaaactcgattcgagaattcgtacgagtttacctaaaattaaaatcaatataaa 3007230  T
Q  198 atttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    ||||||||| | || || |||| ||| ||||||||| || |||||||    
T  3007231 atttattatatgcaagaaatatataagctaatataacatcgtaaata 3007277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 145 - 279
Target Start/End: Original strand, 6387259 - 6387393
Alignment:
Q  145 taaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    ||||||||| ||||||| || |||||||||||||||||||||||||| || ||||||||||| | |||||||||| |||  |||||||||||||||||||    
T  6387259 taaactcgattcgagaattcgtacgagtttacctaaaattaaaattatataaaatttattatatgcatgacatatataagttaatataatattgtaaata 6387358  T
Q  245 gtcaaatagtataaaatatgactaaattataaagg 279  Q
    |   ||||||  ||||||||||| ||||| |||||    
T  6387359 ggttaatagtgcaaaatatgacttaattacaaagg 6387393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 377 - 473
Target Start/End: Complemental strand, 24067206 - 24067110
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||| |||| |||||||||||||| |||||||||||  |||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  24067206 ccgagttaactcgagtcgaactcgtcaaacatgccgattttaccagaaattgagttcacctccgagttgacacgattttggtacctaaaaacgtaaa 24067110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 377 - 473
Target Start/End: Original strand, 37131287 - 37131383
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||| |||||||||| |||||||||| |||||||||  || ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  37131287 ccgagttaactcgagtcaaactcttcaaacattctgattttaccagaagtcgagtttacctccgagttgacacgattttggtacctaaaaatgtaaa 37131383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 391 - 505
Target Start/End: Original strand, 6388140 - 6388254
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||| ||||||| |||||||||||||  |||  ||||||||||| ||||| ||||||||||||||||||||||| |||||||  ||||||||||||    
T  6388140 gtcaaacttgtcaaactttccgattttaccataaacagagtttacctccgagttaacacgattttggtacctaaaaacataaattcgataaactcggcga 6388239  T
Q  491 gttaacactaaattt 505  Q
    |||| |||| |||||    
T  6388240 gttaccactcaattt 6388254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 391 - 516
Target Start/End: Original strand, 8029855 - 8029980
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||| ||| ||||| |||||||||||||||||||| ||||||| ||  ||||||||  ||    
T  8029855 gtcaaactcgtcaaaccttccgattttaccagaaatcgagtttatctcagagttaacacgattttggtacctaaacacgtaaactcgataaactcgaaga 8029954  T
Q  491 gttaacactaaatttatgaaacattg 516  Q
    |||||||||  ||||| | |||||||    
T  8029955 gttaacactcgatttacggaacattg 8029980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 370 - 497
Target Start/End: Complemental strand, 35879786 - 35879666
Alignment:
Q  370 agtttacccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacg 469  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||       |||||||||||||||| |||||||||  |    
T  35879786 agtttacccgagttaactcgagtcaaactcgtcaaacattccaattttaccggaaatcgagttt-------agttgacacgattttgatacctaaaactg 35879694  T
Q  470 taaattcattaaactcggcgagttaaca 497  Q
    || ||||| |||| ||| ||||||||||    
T  35879693 tagattcaataaattcgacgagttaaca 35879666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 160 - 278
Target Start/End: Original strand, 33177262 - 33177380
Alignment:
Q  160 aactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaa 259  Q
    ||||| ||| |||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| |||| ||||||   |||  || |||    
T  33177262 aactcgtaccagtttacctaaaattaaaattatataaaatttattatatacatgacatatgtaaactaatataaaattgcaaataggtcaatgatacaaa 33177361  T
Q  260 atatgactaaattataaag 278  Q
    ||| |||| ||||||||||    
T  33177362 ataagacttaattataaag 33177380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 144 - 273
Target Start/End: Original strand, 27974323 - 27974452
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||| || |||   ||||| | |||||||||| ||| |||| ||||||||||||||    
T  27974323 gtaaactcgactcgagaactcgtataagtttacctaaaattaaaattatataaaaaaaattatatgcatgacatatataagctaacataatattgtaaat 27974422  T
Q  244 agtcaaatagtataaaatatgactaaatta 273  Q
    ||   |||||| |||||||||||| |||||    
T  27974423 aggttaatagtgtaaaatatgacttaatta 27974452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 144 - 273
Target Start/End: Original strand, 28031592 - 28031721
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaat 243  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||| || |||   ||||| | |||||||||| ||| |||| ||||||||||||||    
T  28031592 gtaaactcgactcgagaactcgtataagtttacctaaaattaaaattatataaaaaaaattatatgcatgacatatataagctaacataatattgtaaat 28031691  T
Q  244 agtcaaatagtataaaatatgactaaatta 273  Q
    ||   |||||| |||||||||||| |||||    
T  28031692 aggttaatagtgtaaaatatgacttaatta 28031721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 26619984 - 26620072
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatata 232  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |  ||||||||| ||| ||||||||    
T  26619984 gtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaaatttattatatggatgacatatataagctaatata 26620072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 381 - 516
Target Start/End: Original strand, 10294996 - 10295130
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||||||||||||  ||| |||||||||||| ||||| |||||||| | ||||||||||||||||| ||  ||    
T  10294996 gttaactc-agtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacgattgttgtacctaaaaacgtaaactcggta 10295094  T
Q  481 aactcggcgagttaacactaaatttatgaaacattg 516  Q
    | ||||| |||||||||||  ||||| | |||||||    
T  10295095 atctcggagagttaacactcgatttacggaacattg 10295130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 12522528 - 12522630
Alignment:
Q  397 ctcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaac 496  Q
    |||||||||| |||||||||||||  ||| |||||||||||| ||||| |||||||||||||||||||||| | ||| | | ||||||||| ||||||||    
T  12522528 ctcgtcaaaccttccgattttaccagaaaccgagtttacctctgagttaacacgattttggtacctaaaaatgcaaacttagtaaactcggagagttaac 12522627  T
Q  497 act 499  Q
    |||    
T  12522628 act 12522630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 44977529 - 44977438
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaatta 191  Q
    |||||||| |||||||||||||||| |||||||||||||   ||||||| ||||||||||||||  || |||||||| ||||||||||||||    
T  44977529 aaggttttgcaactcgagagtttacttcaactcgttttgcttaggtaaattcgactcgagaacttctaagagtttacgtaaaattaaaatta 44977438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 144 - 273
Target Start/End: Original strand, 27876447 - 27876579
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagttta---cctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgta 240  Q
    ||||||||||||||||||||| || || ||||   |||||||| ||||||| || ||||||||||| | |||||||||| ||| ||||||||||||| ||    
T  27876447 gtaaactcgactcgagaactcataagaatttattacctaaaataaaaattatataaaatttattatatgcatgacatatataagctaatataatattata 27876546  T
Q  241 aatagtcaaatagtataaaatatgactaaatta 273  Q
    | |||   |||||| |||||||||||| |||||    
T  27876547 agtaggtcaatagtgtaaaatatgacttaatta 27876579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 144 - 273
Target Start/End: Original strand, 28016628 - 28016760
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagttta---cctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgta 240  Q
    ||||||||||||||||||||| || || ||||   |||||||| ||||||| || ||||||||||| | |||||||||| ||| ||||||||||||| ||    
T  28016628 gtaaactcgactcgagaactcataagaatttattacctaaaataaaaattatataaaatttattatatgcatgacatatataagctaatataatattata 28016727  T
Q  241 aatagtcaaatagtataaaatatgactaaatta 273  Q
    | |||   |||||| |||||||||||| |||||    
T  28016728 agtaggtcaatagtgtaaaatatgacttaatta 28016760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 31625852 - 31625735
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||||||||||||  ||| |||||||||||| ||||| |||| ||||| ||||||||||| ||||| ||  ||    
T  31625852 gttaactc-agtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaaaaatgtaaactcggta 31625754  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  31625753 atctcggagagttaacact 31625735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 516
Target Start/End: Complemental strand, 26856670 - 26856515
Alignment:
Q  361 atttactcgagtttaccc-gagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggta 459  Q
    |||||| ||||||||||  | |||||||| |||||||||||| |||| ||| |||||||||  ||| |||||||||||| ||||| |||||||||| |||    
T  26856670 atttacacgagtttaccgagtgttaactc-agtcaaactcgttaaaccttctgattttaccagaaaccgagtttacctcagagttaacacgatttttgta 26856572  T
Q  460 cctaaaaacgtaaattcattaaactcggcgagttaacactaaatttatgaaacattg 516  Q
    |||| |||| |||| ||  ||| ||||| |||||||||||  |||| || |||||||    
T  26856571 cctataaacataaactcggtaatctcggagagttaacactcgatttgtgtaacattg 26856515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 103 - 238
Target Start/End: Original strand, 4870482 - 4870617
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    ||||||||||  ||||||| |||||||||| ||||    | ||||||| || |||  ||||| ||||||||||||||||||||| |||| || |||||||    
T  4870482 gttttacaacaagagagttaacctcaactcattttacttatgtaaacttgaatcgtaaactcgtacgagtttacctaaaattaatattatataaaattta 4870581  T
Q  203 ttatttacatgacatatgtaaactaatataatattg 238  Q
    |||| ||| |||||||||||| | || |||||||||    
T  4870582 ttatatacgtgacatatgtaagccaacataatattg 4870617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 19484301 - 19484194
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| || |||| ||  |||||||| |||    
T  19484301 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcggtaaactcgccga 19484202  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  19484201 gttgacac 19484194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 377 - 499
Target Start/End: Complemental strand, 7760908 - 7760786
Alignment:
Q  377 ccgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||| |||||||||||||||||| |  ||||||| |  ||||| | |||||||  ||||||||||||||||| ||||||||||  |||| ||    
T  7760908 ccgagttaactcgagtcaaactcgtcaaacaatttgattttatcagaaatcaaatttaccttcgagttgacacgattttgatacctaaaaatataaactc 7760809  T
Q  477 attaaactcggcgagttaacact 499  Q
    | ||||||||   ||||||||||    
T  7760808 agtaaactcgataagttaacact 7760786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 9288151 - 9288268
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||||||||| ||  ||    
T  9288151 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggta 9288249  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||  |||||||||||    
T  9288250 atctcgaagagttaacact 9288268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 505
Target Start/End: Complemental strand, 32498064 - 32497962
Alignment:
Q  403 aaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacactaaa 502  Q
    |||| ||||||||||||   ||| |||||||||||| ||||| |||||||||| ||||||||||||||||| ||  ||| ||||| ||||||||||| ||    
T  32498064 aaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcaa 32497965  T
Q  503 ttt 505  Q
    |||    
T  32497964 ttt 32497962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 27869131 - 27869215
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaa 228  Q
    ||||| |||||||||||||||  |||||||||||||||| |||||||| || ||||||||||| | |||||||||| ||| ||||    
T  27869131 gtaaattcgactcgagaactcgaacgagtttacctaaaaataaaattatataaaatttattatatgcatgacatatataagctaa 27869215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 389 - 476
Target Start/End: Complemental strand, 16364243 - 16364156
Alignment:
Q  389 tagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    ||||||||||||| |||| ||||||||||||   ||| ||| |||||||  ||||| |||||||||| ||||||||||||||||||||    
T  16364243 tagtcaaactcgttaaaccttccgattttactagaaaccgaatttaccttagagttaacacgatttttgtacctaaaaacgtaaattc 16364156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 27878640 - 27878734
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||| ||||||||||||||| | |||||||||||  ||| ||| ||||| || ||||| |||||||||||||||||||| ||||| ||||    
T  27878640 gttaactcta-tcaaactcgtcaaacctaccgattttaccagaaaccgaatttacatccgagttaacacgattttggtacctaaacacgtatattc 27878734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 28018821 - 28018915
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||| ||||||||||||||| | |||||||||||  ||| ||| ||||| || ||||| |||||||||||||||||||| ||||| ||||    
T  28018821 gttaactcta-tcaaactcgtcaaacctaccgattttaccagaaaccgaatttacatccgagttaacacgattttggtacctaaacacgtatattc 28018915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 7761148 - 7761067
Alignment:
Q  230 ataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataaaacattatgttcaa 312  Q
    ||||||||| |||||||| ||||||  ||||||||| ||||||||||||||| ||||||||| ||||||| || |||||||||    
T  7761148 ataatattgcaaatagtccaatagtgcaaaatatgattaaattataaaggttttcaaccaccataataaagca-tatgttcaa 7761067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 18305633 - 18305750
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||| | |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||||||||  ||  ||    
T  18305633 gttaactc-agtcaaactctttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggta 18305731  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  18305732 atctcggagagttaacact 18305750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 19484973 - 19484915
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||    
T  19484973 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 19484915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 19717531 - 19717648
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||| ||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  19717531 gttaactc-agtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggta 19717629  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  19717630 atctcggagagttaacact 19717648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 391 - 476
Target Start/End: Original strand, 28317086 - 28317171
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||||||| || |||||| ||| ||||||||||||||||| |||||  |||  |||||  ||||||||||||||||||    
T  28317086 gtcaaactcgtcaaacttttcgatttcaccaaaaatcgagtttacctccgagttttcacctttttgccacctaaaaacgtaaattc 28317171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 1527921 - 1528001
Alignment:
Q  393 caaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||| ||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||| |||||  || ||||||||||||    
T  1527921 caaacttgtccaacattccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacttaaaaacgtaaa 1528001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 472
Target Start/End: Original strand, 44725423 - 44725538
Alignment:
Q  357 ttcgatttactcgagtttaccc-gagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgatttt 455  Q
    ||||| |||| ||||||||||  | |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| ||||||||||    
T  44725423 ttcgagttacacgagtttaccgagtgttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttt 44725521  T
Q  456 ggtacctaaaaacgtaa 472  Q
     ||||||||||| ||||    
T  44725522 tgtacctaaaaatgtaa 44725538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 516
Target Start/End: Original strand, 42305261 - 42305395
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||| ||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| ||||||||||  |||||||||| ||||| ||  ||    
T  42305261 gttaactc-agtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacctaaaaaggtaaactcggta 42305359  T
Q  481 aactcggcgagttaacactaaatttatgaaacattg 516  Q
    | ||||| |||||||||||  |||| || |||||||    
T  42305360 atctcggagagttaacactcgatttgtggaacattg 42305395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 7761256 - 7761198
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaattta 202  Q
    |||||||| |||||||||||| |||||||||| ||||||||||||||| || |||||||    
T  7761256 gtaaactcaactcgagaactcgtacgagtttatctaaaattaaaattaaataaaattta 7761198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38782503 - 38782561
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaa 59  Q
    ||||||||||||||||||||| | |||||| |||||||| |||||||| ||||||||||    
T  38782503 tttatgttattttacatttataagttagttgaaccgtttaattttaccaaacacttcaa 38782561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 476
Target Start/End: Original strand, 27915593 - 27915678
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||||||| | ||||||||| |  ||||||| ||||  || ||||| ||||||||||||||| |||| ||||||||||    
T  27915593 gtcaaactcgtcaaacctaccgattttatcagaaatcgaatttaaatctgagttaacacgattttggtacataaacacgtaaattc 27915678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 476
Target Start/End: Original strand, 27962012 - 27962097
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattc 476  Q
    |||||||||||||||| | ||||||||| |  ||||||| ||||  || ||||| ||||||||||||||| |||| ||||||||||    
T  27962012 gtcaaactcgtcaaacctaccgattttatcagaaatcgaatttaaatctgagttaacacgattttggtacataaacacgtaaattc 27962097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 259 - 312
Target Start/End: Original strand, 37131077 - 37131130
Alignment:
Q  259 aatatgactaaattataaaggttatcaaccaccgtaataaaacattatgttcaa 312  Q
    ||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  37131077 aatatgattaaattataaaggttttcaaccaccataataaagcattatgttcaa 37131130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 33177853 - 33177944
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| |||||||||||||||||||| | |||| ||| ||||||||||||||||   | || ||||  ||||||||||||||||| ||||    
T  33177853 gttaactc-agtcaaactcgtcaaacatttcaatttcaccaaaaatcgagtttaccttcaaattaacacatttttggtacctaaaaacataaa 33177944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 43166333 - 43166424
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| ||||||||||||||||| || | ||||||||  |||   | |||||||| ||||| |||||||||| |||||||||||||||||    
T  43166333 gttaactc-agtcaaactcgtcaaacctttcaattttaccagaaacttattttacctcagagttaacacgatttttgtacctaaaaacgtaaa 43166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 6387200 - 6387239
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttg 138  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  6387200 caaggttttacaactcaagagtttacctcaactcgttttg 6387239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 41252247 - 41252168
Alignment:
Q  394 aaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||||| ||||||||| | | |||||||||||||| || ||||| ||||| |||||  ||||||||| |||||    
T  41252247 aaactcgtcaaactttccgatttcatcaaaaatcgagtttacttccgagttaacacgtttttgccacctaaaaaagtaaa 41252168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 467
Target Start/End: Original strand, 14781789 - 14781874
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaa 467  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| ||||||||||  ||||||||||    
T  14781789 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacctaaaaa 14781874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 18958384 - 18958501
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||| || || |||| |||| ||||||||  ||| | | |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  18958384 gttaactc-agtcaatcttgttaaaccttccaattttaccagaaaccaattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggta 18958482  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  18958483 atctcggagagttaacact 18958501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 39467175 - 39467292
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||  |||| |||| ||||||||  ||||| | |||||||  ||||| | |||||||| |||||||||||||||||  |  ||    
T  39467175 gttaactc-agtcaaactcgctaaaccttccaattttaccagaaatcaattttaccttagagttaatacgatttttgtacctaaaaacgtaaacgcggta 39467273  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  39467274 atctcggagagttaacact 39467292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 43308165 - 43308282
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| ||||||||| || |||| |||| ||||||||  ||| ||| ||||  || ||||| |||||||||||||||||||||||| ||| ||  ||    
T  43308165 gttaactc-agtcaaacttgttaaaccttccaattttaccagaaaccgattttatatcagagttaacacgattttggtacctaaaaacgcaaactcgata 43308263  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||  |||||||||||    
T  43308264 atctcgaagagttaacact 43308282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 505
Target Start/End: Complemental strand, 24082289 - 24082184
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacact 499  Q
    ||||||| || ||||||||||  ||| ||| |||||||| |  || |||| |||||||||||||||| | |||| | | |||||||| ||||||||||||    
T  24082289 gtcaaacctttcgattttaccagaaaccgaatttacctcagtattaacacaattttggtacctaaaatcataaacttagtaaactcgtcgagttaacact 24082190  T
Q  500 aaattt 505  Q
     |||||    
T  24082189 caattt 24082184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16423493 - 16423564
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||||| | ||||||| ||||||||| ||||||||| ||||    
T  16423493 tttatgtcattttacatttatcagctagttgaaccgttat-ttttaccaaacacttcagttagtttatcagct 16423564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 19484893 - 19484818
Alignment:
Q  166 tacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    ||||||||||||||||||| |||||  ||  |||||||||| | ||| |||||||||| ||||||||||| ||||||    
T  19484893 tacgagtttacctaaaattgaaattttatacaatttattatatgcat-acatatgtaagctaatataatactgtaaa 19484818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 17235022 - 17234979
Alignment:
Q  227 aatataatattgtaaatagtcaaatagtataaaatatgactaaa 270  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||    
T  17235022 aatataatattgtaaatagtccaatagtgcaaaatatgactaaa 17234979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 473
Target Start/End: Original strand, 12522485 - 12522518
Alignment:
Q  440 gagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||| ||||||||||||||||||||||||||||    
T  12522485 gagttaacacgattttggtacctaaaaacgtaaa 12522518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 26619926 - 26619967
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgt 139  Q
    |||||||||||||| ||||||||||||  |||||||||||||    
T  26619926 ccaaggttttacaattcgagagtttactacaactcgttttgt 26619967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37586687 - 37586630
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttca 58  Q
    ||||||| ||||||||||||||| |||||| ||||| | | ||||||| |||||||||    
T  37586687 tttatgtcattttacatttatcagttagttgaaccgctattttttaccaaacacttca 37586630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 473
Target Start/End: Complemental strand, 41394005 - 41393960
Alignment:
Q  428 gagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||| || || ||||||||||| ||||||||||||||||    
T  41394005 gagtttacctccgaattaacacgattttgatacctaaaaacgtaaa 41393960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 7761310 - 7761274
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgt 139  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  7761310 gttttacaacttgagaggttacctcaactcgttttgt 7761274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17116143 - 17116214
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| ||||||||| ||||    
T  17116143 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagtttatcagct 17116214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 39746099 - 39746036
Alignment:
Q  9 attttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    |||||||||||||||| ||||| |||||  | |||||||| |||| ||||||||| |||||||||    
T  39746099 attttacatttatcaactagttgaaccg-ctaattttaccaaacatttcaattagcttataagct 39746036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 40046271 - 40046330
Alignment:
Q  41 attttacccaacacttcaattagtttataagc--ttagtcatcggtcagcagctataagc 98  Q
    |||||||| |||||||||||||| |||| |||  ||||||||| |||| |||||||||||    
T  40046271 attttaccaaacacttcaattagcttatcagctattagtcatctgtcatcagctataagc 40046330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44826873 - 44826802
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| |||||||||||||| |||| ||||    
T  44826873 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcaattagcttatcagct 44826802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45140943 - 45140872
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||||||||| | | ||||||| ||||||||| |||| |||| ||||    
T  45140943 tttatgtcattttacatttatcagctagttaaaccgctat-ttttaccaaacacttcagttagcttatcagct 45140872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 7e-57; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 98 - 278
Target Start/End: Complemental strand, 16439481 - 16439301
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaa 197  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||    
T  16439481 ccaaggtttttcaactcgagagtttacctcaactcgttttgtctaggtaaactcgactcgagaactcgtacgagtttacctaaaattaaaattatataaa 16439382  T
Q  198 atttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaag 278  Q
    ||||||||  |||||||||||| ||| ||||||||||| | |||||||   |||||| |||||||||||| ||||| ||||    
T  16439381 atttattacatacatgacatatataagctaatataataatataaataggtcaatagtgtaaaatatgacttaattacaaag 16439301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 119 - 312
Target Start/End: Complemental strand, 28042152 - 28041962
Alignment:
Q  119 gtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacata 218  Q
    ||||||||||||| ||||| |  ||||||||||||||||||||||  ||||||||||||||||||||||||   || |||||||||||||||||| ||||    
T  28042152 gtttacctcaacttgttttatttaggtaaactcgactcgagaacttgtacgagtttacctaaaattaaaat---ataaaatttattatttacatgtcata 28042056  T
Q  219 tgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaaggttatcaaccaccgtaataaaacattatgttcaa 312  Q
    ||||||||||||||||||| ||||||||| |||| |  ||||||||| ||||||||||||| | | ||||||| ||||||||||||||||||||    
T  28042055 tgtaaactaatataatattataaatagtccaataatgcaaaatatgattaaattataaaggattttaaccaccataataaaacattatgttcaa 28041962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 99 - 244
Target Start/End: Original strand, 31534419 - 31534564
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||| ||||||| |||||||||||||||||||||||||| || |||    
T  31534419 caaggttttgcaacttgagagtttacctcaaatcgttttgtctgggtaaactcgactcaagaactcgtacgagtttacctaaaattaaaattatataaaa 31534518  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaata 244  Q
    |||||||| | || || |||| ||| ||||||||||||||||||||    
T  31534519 tttattatatgcaagatatatttaagctaatataatattgtaaata 31534564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 99 - 279
Target Start/End: Original strand, 31975066 - 31975246
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| |||||||||||||||||||||||||||| |   || |||||||||||||||||||| ||||| |||||||||||||||||||| || |||    
T  31975066 caaggttttgcaactcgagagtttacctcaactcgtttcgcatagataaactcgactcgagaactcgtacgattttacctaaaattaaaattatataaaa 31975165  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaagg 279  Q
    |||||||| | || ||||||| |||  |||||||||||||||||||    ||||||  ||||||||||| ||||| |||||    
T  31975166 tttattatatgcaagacatatataagataatataatattgtaaatatatcaatagtgaaaaatatgacttaattacaaagg 31975246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 97 - 273
Target Start/End: Complemental strand, 24202894 - 24202718
Alignment:
Q  97 gccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacatta 196  Q
    |||||||||||| || |||||| |||| || ||||||||||  | |||||||||||||| | ||| || |||||||||||||||||||||||||| || |    
T  24202894 gccaaggttttataattcgagactttatcttaactcgttttacctaggtaaactcgacttgtgaattcgtacgagtttacctaaaattaaaattaaataa 24202795  T
Q  197 aatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaatta 273  Q
    |||||||||| | |||||||||| |||  |||||||||||| |||||||   |||||| |||||||||||| |||||    
T  24202794 aatttattatatgcatgacatatataagttaatataatattataaataggtcaatagtgtaaaatatgacttaatta 24202718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 31975666 - 31975774
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| ||||||||||||   |||||||||||||||| ||||| |||||||||||||||||||| || |||| ||| ||||||||| ||    
T  31975666 gtcaaactcgtcaaaccttccgattttacaagaaatcgagtttacctcagagttaacacgattttggtacctaaacacataaactcagtaaactcggaga 31975765  T
Q  491 gttaacact 499  Q
    |||||||||    
T  31975766 gttaacact 31975774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 392 - 499
Target Start/End: Complemental strand, 3000325 - 3000218
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgag 491  Q
    ||||||||||||||| | |||||||||||  ||||||| |||||| | ||||| |||||||||||||||||||| ||||||| ||| |||||||||||||    
T  3000325 tcaaactcgtcaaacttcccgattttaccataaatcgaatttacccccgagttaacacgattttggtacctaaacacgtaaaatcagtaaactcggcgag 3000226  T
Q  492 ttaacact 499  Q
    ||||||||    
T  3000225 ttaacact 3000218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 99 - 278
Target Start/End: Complemental strand, 2607719 - 2607540
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    ||||||||| ||| |||||| ||||| ||||||||||| | | ||||||| |  |||||||||||| ||||||||||||||||||||||| || || |||    
T  2607719 caaggttttgcaattcgagaatttacttcaactcgtttcgcctaggtaaaattaactcgagaactcgtacgagtttacctaaaattaaaactatataaaa 2607620  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaattataaag 278  Q
    |||||||| | ||  |||||| ||| | || ||||||||||||||||   ||||||  |||||| | || ||||||||||    
T  2607619 tttattatattcaaaacatatataagccaacataatattgtaaataggtcaatagtgaaaaatacggcttaattataaag 2607540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 390 - 473
Target Start/End: Complemental strand, 13461460 - 13461377
Alignment:
Q  390 agtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  13461460 agtcaaactcgtcaaacattctgattttaccaaaaaccgagtttacctccgagttgacacgattttgatacataaaaacgtaaa 13461377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 16438789 - 16438684
Alignment:
Q  394 aaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagtt 493  Q
    ||||||||||||| |||||||||||||  || |||||||||||||  |||| |||||||||| ||||||||||||||||| ||  ||||||||| |||||    
T  16438789 aaactcgtcaaaccttccgattttaccagaagtcgagtttacctccaagttaacacgatttttgtacctaaaaacgtaaactcgataaactcggagagtt 16438690  T
Q  494 aacact 499  Q
    ||||||    
T  16438689 aacact 16438684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 498
Target Start/End: Original strand, 1463685 - 1463792
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  1463685 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 1463784  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  1463785 gttgacac 1463792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 6788186 - 6788079
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  6788186 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccga 6788087  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  6788086 gttgacac 6788079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 498
Target Start/End: Original strand, 10113794 - 10113901
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||| ||||| ||||| |||| | ||||||| ||||||| ||  |||||||| |||    
T  10113794 gtcaaactcgtcaaactttccgattttaccaaaaaacgagtttacctccgagttaacacgtttttaggacctaaacacgtaaactcggtaaactcgccga 10113893  T
Q  491 gttaacac 498  Q
    ||| ||||    
T  10113894 gttgacac 10113901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 21199640 - 21199558
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||| |||||| ||||| |||||  |||||||||||||||    
T  21199640 gtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttaccttggagttaacacggttttgccacctaaaaacgtaaa 21199558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 31996262 - 31996344
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  31996262 gtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 31996344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 6789141 - 6788985
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactct-------------tacgagtttacctaaaatta 185  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||  |||||              |||||||||||||||||||     
T  6789141 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaattg 6789042  T
Q  186 aaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
    |||||  ||  |||||||||| | |||||||||||||| ||||||||||| ||||||    
T  6789041 aaattttatacaatttattatatgcatgacatatgtaagctaatataatactgtaaa 6788985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 473
Target Start/End: Original strand, 8779583 - 8779677
Alignment:
Q  378 cgagttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||| | |||||||||||||||| ||||||||| ||| |||| |||||||||||| ||||| ||||| |||||  |||||||||||||||    
T  8779583 cgagttaact-tggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaa 8779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 28900199 - 28900317
Alignment:
Q  153 actcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaata 252  Q
    |||||||| ||| |||||||||||||||| ||||||||| || |||||| |||| | || ||||||| ||| |||||||||||||||||||||   ||||    
T  28900199 actcgagagctcgtacgagtttacctaaa-ttaaaattatataaaatttcttatatgcaagacatatataagctaatataatattgtaaataggtcaata 28900297  T
Q  253 gtataaaatatgactaaatt 272  Q
    ||  ||||||||||| ||||    
T  28900298 gtgaaaaatatgacttaatt 28900317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 485
Target Start/End: Complemental strand, 2606981 - 2606887
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactc 485  Q
    ||||||||| |||||| ||| |||||||||  |||||||||||||||| ||||| | ||||||||||| |||||| ||||||| ||| |||||||    
T  2606981 gtcaaactcatcaaaccttctgattttaccagaaatcgagtttacctcagagttaaaacgattttggtgcctaaacacgtaaactcagtaaactc 2606887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 14262094 - 14262211
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||||||| |||||||| ||||| |||||||||| ||||||||||| ||||| |   ||    
T  14262094 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaaaaagtaaactagata 14262192  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  14262193 atctcggagagttaacact 14262211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 392 - 473
Target Start/End: Complemental strand, 7497631 - 7497550
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||| |||| |||| ||||||||  ||| |||||||||||| ||||| |||||||||| |||||||||||||||||    
T  7497631 tcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaa 7497550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 100 - 219
Target Start/End: Original strand, 32567610 - 32567734
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactc-----gagaactcttacgagtttacctaaaattaaaattacat 194  Q
    ||||||||  ||||| ||||||||||| ||||| |||||   |||||||||||||||     |||||||| |||||||||||||||||||||||||| ||    
T  32567610 aaggttttggaactcaagagtttaccttaactcattttgcttaggtaaactcgactcaactcgagaactcgtacgagtttacctaaaattaaaattatat 32567709  T
Q  195 taaatttattatttacatgacatat 219  Q
     |||||| |||| | ||||| ||||    
T  32567710 aaaatttgttatatgcatgatatat 32567734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 465
Target Start/End: Original strand, 28900863 - 28900926
Alignment:
Q  402 caaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaa 465  Q
    ||||| |||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||    
T  28900863 caaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaa 28900926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 1462728 - 1462786
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||    
T  1462728 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 1462786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 10110658 - 10110716
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||    
T  10110658 caaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcg 10110716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 31067975 - 31067858
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  31067975 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgata 31067877  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  31067876 atctcggagatttaacact 31067858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 31535074 - 31535156
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||||||||||| || ||||||||||  ||||||||||| |||| ||||| |||| |||||| |||||||||| |||||    
T  31535074 gtcaaactcgtcaaacctttcgattttaccagaaatcgagtttgcctcagagttaacacaattttgatacctaaaaatgtaaa 31535156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 31995709 - 31995771
Alignment:
Q  144 gtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttattat 206  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||| || |||||||||||    
T  31995709 gtaaactcgactcgtaaactcgtacgagtttacctaaaattaaaattatataaaatttattat 31995771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 516
Target Start/End: Complemental strand, 31896180 - 31896046
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| |||||||||| ||||||||||| ||| | ||  ||    
T  31896180 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtatactcgata 31896082  T
Q  481 aactcggcgagttaacactaaatttatgaaacattg 516  Q
    | ||||| || ||||||||  ||||| | |||||||    
T  31896081 atctcggagatttaacactcgatttacggaacattg 31896046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 3001033 - 3000979
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||| ||||||||    
T  3001033 gttttacaactcgagagtttacctcaactcgttttatctaggaaaattcgactcg 3000979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 34758737 - 34758828
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    |||||||| ||||||||| || |||| |||| |||||| |  ||| ||| |||||||| ||||| |||||||||| |||||||||||||||||    
T  34758737 gttaactc-agtcaaacttgttaaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaa 34758828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 4200109 - 4200226
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| ||| |||||| |||| |||||| ||||| ||  ||    
T  4200109 gttaactc-agtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacttaaaaatgtaaactcgata 4200207  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| || ||||||||    
T  4200208 atctcggagatttaacact 4200226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 30384722 - 30384839
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| |||||| |  |||  || |||||||  ||||| |||||||||| |||||||||||| |||| ||  ||    
T  30384722 gttaactc-agtcaaactcgttaaaccttccaattttatcagaaactgattttaccttagagttaacacgatttttgtacctaaaaacataaactcggta 30384820  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  30384821 atctcggagagttaacact 30384839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 473
Target Start/End: Original strand, 7835387 - 7835460
Alignment:
Q  400 gtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||| ||||||||| ||| |||| |||||||||||| || || ||||| |||||  |||||||||||||||    
T  7835387 gtcaaactttccgatttcaccaaaaaccgagtttacctccgacttaacacgtttttgccacctaaaaacgtaaa 7835460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 1462808 - 1462872
Alignment:
Q  166 tacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaata 230  Q
    ||||||||||||||||||| |||||  ||  |||||||||| | |||||||||||||| ||||||    
T  1462808 tacgagtttacctaaaattgaaattttatacaatttattatatgcatgacatatgtaagctaata 1462872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15590633 - 15590561
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    |||||||||||||| |||||||| |||||| |||||||   ||||||| ||||||| |||||| |||| ||||    
T  15590633 tttatgttattttatatttatcagttagttgaaccgttaatttttaccaaacactttaattagcttatcagct 15590561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 7834997 - 7835031
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||| |||||||||||||||||||||||    
T  7834997 gttttacaacttgagagtttacctcaactcgtttt 7835031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 473
Target Start/End: Complemental strand, 12029061 - 12028979
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||||||||||| |||||| |   |||||||||||||||||  |||| ||||| |||||   ||||||||| ||||    
T  12029061 gtcaaactcgtcaaacatttcgatttcaataaaaatcgagtttacctcaaagttaacacgtttttgacccctaaaaacataaa 12028979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 31995655 - 31995689
Alignment:
Q  103 gttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||||||||||||||| |||||||||||    
T  31995655 gttttacaactcgagagtttaccacaactcgtttt 31995689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 559004 - 559075
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| |||||||||||||| |||| ||||    
T  559004 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcaattagcttatcagct 559075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12432148 - 12432077
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| |||| |||||||||    
T  12432148 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagcttataagct 12432077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31099500 - 31099429
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| |||| |||||||||    
T  31099500 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagcttataagct 31099429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 99 - 273
Target Start/End: Complemental strand, 136311 - 136137
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||| |||| ||| |||||| ||||||||||||| ||||| | || ||||||||||||||||||||  ||||||||||||||||||||||||| || |||    
T  136311 caagattttgcaattcgagaatttacctcaactcattttgcctagataaactcgactcgagaactcgcacgagtttacctaaaattaaaattatataaaa 136212  T
Q  199 tttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaatagtataaaatatgactaaatta 273  Q
    |||||||| |||||||||||| ||| ||||||||||| | |||||||   ||||||| |||||| |||| |||||    
T  136211 tttattatatacatgacatatataagctaatataatactataaataggtcaatagtacaaaatacgacttaatta 136137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 104 - 237
Target Start/End: Original strand, 4906 - 5041
Alignment:
Q  104 ttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaatttat 203  Q
    ||||| || |||| ||||||||||||||||||||| | | ||||| ||||||||||||||| |||||||||||||||||||||||||| || ||||||||    
T  4906 ttttataaatcgaaagtttacctcaactcgttttgcctaagtaaattcgactcgagaactcgtacgagtttacctaaaattaaaattaaataaaatttat 5005  T
Q  204 tatttacatgacata--tgtaaactaatataatatt 237  Q
    |||||| ||||||||  |||||||||||||||||||    
T  5006 tatttatatgacatatgtgtaaactaatataatatt 5041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 56; Significance: 7e-23; HSPs: 3)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 25002 - 25109
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactcttacgagtttacctaaaattaaaattacattaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||||||| |||  ||||| |||||||||| ||| ||||||||||  || |||    
T  25002 caaggttttacaactcgagagtttacctcaactcgttttagctatgtaaactcgaatcgtaaactcgtacgagtttatctataattaaaattttataaaa 25101  T
Q  199 tttattat 206  Q
    ||||||||    
T  25102 tttattat 25109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 2025 - 1987
Alignment:
Q  99 caaggttttacaactcgagagtttacctcaactcgtttt 137  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  2025 caaggttttacaactcgggagtttacctcaactcgtttt 1987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 1450 - 1371
Alignment:
Q  394 aaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaa 473  Q
    ||||||||||||| ||||||||| ||  |||| ||||||||||||  |||| ||| | |||||  |||||||||||||||    
T  1450 aaactcgtcaaactttccgatttcactaaaaaccgagtttacctccaagttaacatgtttttgccacctaaaaacgtaaa 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 11068 - 10951
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| |||||||| |||||||| |||||||| ||||| |||||||||| ||||||||||| ||||| ||  ||    
T  11068 gttaactc-agtcaaactcgttaaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggta 10970  T
Q  481 aactcggcgagttaacact 499  Q
    | ||||| |||||||||||    
T  10969 atctcggagagttaacact 10951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 390 - 499
Target Start/End: Original strand, 39301 - 39410
Alignment:
Q  390 agtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcg 489  Q
    ||||||||||||||||| || ||||||||||  ||| |||||| ||||| | ||| |||||||||||||||||||||||||||| ||  ||| ||||| |    
T  39301 agtcaaactcgtcaaacctttcgattttaccagaaaccgagttgacctcagggttaacacgattttggtacctaaaaacgtaaactcggtaatctcggag 39400  T
Q  490 agttaacact 499  Q
    ||||||||||    
T  39401 agttaacact 39410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 391 - 499
Target Start/End: Original strand, 919 - 1027
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcga 490  Q
    ||||||||| |||||| |||||||||||||  ||| |||||||||||| ||||| |||||||||||||||||||| ||||||| ||  ||||||| | |     
T  919 gtcaaactcatcaaactttccgattttaccagaaaccgagtttacctccgagttaacacgattttggtacctaaacacgtaaactcggtaaactcagagt 1018  T
Q  491 gttaacact 499  Q
    |||||||||    
T  1019 gttaacact 1027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 98 - 242
Target Start/End: Original strand, 16136 - 16293
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcgagaactct-------------tacgagtttacctaaaatt 184  Q
    |||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||  |||||              |||||||||||||||||||    
T  16136 ccaaggttttgcaactcgagagtttacctcaactcgttttacctaggtaaactcgactcgtaaactcgaatcgtaaactcgtacgagtttacctaaaatt 16235  T
Q  185 aaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaa 242  Q
     |||||  ||  |||||||||| | |||||||||||||| ||||||||||| ||||||    
T  16236 gaaattttatacaatttattatatgcatgacatatgtaagctaatataatactgtaaa 16293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 431929 - 432000
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| ||||||||| ||||    
T  431929 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagtttatcagct 432000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 516
Target Start/End: Complemental strand, 1410 - 1276
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcatta 480  Q
    |||||||| |||||||||||| |||| |||| |||||||   ||| ||| |||||||| ||||| |||||||||| ||||||||||||||||| ||  ||    
T  1410 gttaactc-agtcaaactcgttaaaccttccaattttacaagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggta 1312  T
Q  481 aactcggcgagttaacactaaatttatgaaacattg 516  Q
    | ||||| |||||||||||  |||| || |||||||    
T  1311 atctcggagagttaacactcgatttgtggaacattg 1276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 9595 - 9477
Alignment:
Q  153 actcgagaactcttacgagtttacctaaaattaaaattacattaaatttattatttacatgacatatgtaaactaatataatattgtaaatagtcaaata 252  Q
    |||||||| ||| |||||||||||||||| ||||||||| || |||||| |||| | || ||||||| ||| |||||||||||||||||||||   ||||    
T  9595 actcgagagctcgtacgagtttacctaaa-ttaaaattatataaaatttcttatatgcaagacatatataagctaatataatattgtaaataggtcaata 9497  T
Q  253 gtataaaatatgactaaatt 272  Q
    ||  ||||||||||| ||||    
T  9496 gtgaaaaatatgacttaatt 9477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 465
Target Start/End: Complemental strand, 8931 - 8868
Alignment:
Q  402 caaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaa 465  Q
    ||||| |||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||    
T  8931 caaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaa 8868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 392 - 516
Target Start/End: Complemental strand, 89365 - 89241
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgag 491  Q
    ||||||||||||||| |||| ||||||||  |||||||||||||||   |||| ||||||| ||||||||||||||| |||| ||  |||||||   |||    
T  89365 tcaaactcgtcaaaccttccaattttaccagaaatcgagtttaccttcaagttaacacgatattggtacctaaaaacttaaactcgataaactcacagag 89266  T
Q  492 ttaacactaaatttatgaaacattg 516  Q
    ||||||||  ||||| | |||||||    
T  89265 ttaacactcgatttacggaacattg 89241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 89976 - 89927
Alignment:
Q  196 aaatttattatttacatgacatatgtaaactaatataatattgtaaatag 245  Q
    ||||||||||| | |||||||||||||| ||||||||||| |||||||||    
T  89976 aaatttattatatgcatgacatatgtaagctaatataatactgtaaatag 89927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 392 - 499
Target Start/End: Original strand, 57732 - 57839
Alignment:
Q  392 tcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgag 491  Q
    |||||||| | |||| ||| ||||||||   ||| |||||||||||| ||||| |||||||||| ||||||||||||||||| ||  ||| ||||| |||    
T  57732 tcaaactcattaaaccttctgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagag 57831  T
Q  492 ttaacact 499  Q
    ||||||||    
T  57832 ttaacact 57839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0421 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 449
Target Start/End: Complemental strand, 1785 - 1727
Alignment:
Q  391 gtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacac 449  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||||    
T  1785 gtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacac 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1678 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1678
Description:

Target: scaffold1678; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 1430 - 1483
Alignment:
Q  98 ccaaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactc 151  Q
    ||||||||||||| || |||| ||||||| ||||||||||| | ||||||||||    
T  1430 ccaaggttttacatcttgagaatttaccttaactcgttttgcctaggtaaactc 1483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 455
Target Start/End: Complemental strand, 15197 - 15132
Alignment:
Q  390 agtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacacgatttt 455  Q
    |||||||||||| |||| |||| ||||||||  ||| ||| |||||||| ||||| ||||||||||    
T  15197 agtcaaactcgttaaaccttccaattttaccataaaccgattttacctcagagttaacacgatttt 15132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 36903 - 36960
Alignment:
Q  100 aaggttttacaactcgagagtttacctcaactcgttttgtccaggtaaactcgactcg 157  Q
    |||||||| |||||||| ||||||||||||||| ||||| | |||| |||| ||||||    
T  36903 aaggttttgcaactcgaaagtttacctcaactcattttgcctaggtcaacttgactcg 36960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 449
Target Start/End: Original strand, 16687 - 16754
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacac 449  Q
    |||||||| |||||||||||| |||| || ||||||||||  ||| |||||||||||| ||||| ||||    
T  16687 gttaactc-agtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaacac 16754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27741 - 27670
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| ||||||||| ||||    
T  27741 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagtttatcagct 27670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 449
Target Start/End: Original strand, 20923 - 20990
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacac 449  Q
    |||||||| |||||||||||| |||| || ||||||||||  ||| |||||||||||| ||||| ||||    
T  20923 gttaactc-agtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaacac 20990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 449
Target Start/End: Complemental strand, 28878 - 28811
Alignment:
Q  381 gttaactctagtcaaactcgtcaaacattccgattttaccgaaaatcgagtttacctcggagttgacac 449  Q
    |||||||| |||||||||||| |||| || ||||||||||  ||| |||||||||||| ||||| ||||    
T  28878 gttaactc-agtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaacac 28811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11906 - 11835
Alignment:
Q  1 tttatgttattttacatttatcaattagttaaaccgttttattttacccaacacttcaattagtttataagct 73  Q
    ||||||| |||||||||||||||  ||||| ||||| | | ||||||| ||||||||| ||||||||| ||||    
T  11906 tttatgtcattttacatttatcagctagttgaaccgctat-ttttaccaaacacttcagttagtttatcagct 11835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University