View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16735_high_61 (Length: 320)
Name: NF16735_high_61
Description: NF16735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16735_high_61 |
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Alignment Details
Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 95 - 281
Target Start/End: Complemental strand, 37179245 - 37179059
Alignment:
| Q |
95 |
aaaattagttgacaataactaaagcttattcttgatcatgtatctattgttagtgttttcctaacaatgagaacgagttccatgattaaatcactcgaaa |
194 |
Q |
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| T |
37179245 |
aaaattatttgacaataactaaagcttactcttgatcatgtatctattgttagtgttttcctaacaatgagaacgagttccatgattaaatcactcgaaa |
37179146 |
T |
|
| Q |
195 |
catctgcaaaacttctcagttataaagaagaaggtagacgtgcttgattgcatcaaacaaatccttttaaaatagatggacaaacag |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37179145 |
catctgcaaaacttctcagttataaagaagaaggtagacgtgcttgattgcatcaaacaaatccttttaaaatagatggacaaacag |
37179059 |
T |
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