View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16735_high_89 (Length: 248)
Name: NF16735_high_89
Description: NF16735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16735_high_89 |
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Alignment Details
Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 9997332 - 9997456
Alignment:
| Q |
7 |
gtgagatgaaatgaagaggaagaagaaagatgatagaggctataattctcaagttgacagagaagacaacgaagttgctgttggttttaaccaaagaata |
106 |
Q |
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| T |
9997332 |
gtgaaatgaaatgaagaggaagaagaaagatgatagaggctataattctcaagttgacagagaagacaacgaagttgctgttggttttaaccaaagaata |
9997431 |
T |
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| Q |
107 |
ttagagaatattctatatgtttcac |
131 |
Q |
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| T |
9997432 |
ttagagaatattctatatgattcac |
9997456 |
T |
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