View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16735_high_92 (Length: 244)
Name: NF16735_high_92
Description: NF16735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16735_high_92 |
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Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 44957771 - 44957987
Alignment:
| Q |
18 |
tggtatttggaaacaagatgttgaaatcatatgacaagtcataaagaatggcttataatattttgatgaaaccagaaaaaaccaagattagatttgcaga |
117 |
Q |
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| T |
44957771 |
tggtatttggacacgagatgttgaaatcatatgacaagtcataaagaatggcttataatattttgatgaaaccagaaaaaaccaagattagatttgcaga |
44957870 |
T |
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| Q |
118 |
taattggactattccatcagagagagtaggaaaggaaatgtgctcatcaaaggcaagcatggacacaaggaaatcattacatgggtgatctatgttccta |
217 |
Q |
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| T |
44957871 |
taattggaccattccatcagagagagtaggaaaggaaatgtgctcatcaaaggcaagcatggacacaaggaaatcattacatgggtgatctatgttccta |
44957970 |
T |
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| Q |
218 |
ggatcaagaataattta |
234 |
Q |
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| T |
44957971 |
ggatcaagagtaattta |
44957987 |
T |
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