View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16735_low_122 (Length: 207)
Name: NF16735_low_122
Description: NF16735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16735_low_122 |
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Alignment Details
Target: chr7 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 23368682 - 23368596
Alignment:
| Q |
1 |
tcctaagtaggccattgtagaacatatttgaatttaatctcattatataatgatgttcggtcatatctaaaaatagacctaccacat |
87 |
Q |
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| T |
23368682 |
tcctaagtaggccattgtagaacatatttgaatttaatctcattatataatgatgttcggtcatatctaaaaatagacctaccacat |
23368596 |
T |
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Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 23368559 - 23368491
Alignment:
| Q |
124 |
gtagtagaaaatataatgctaatgagtatcctaagagcatgcaaatcagtagtttcggtgtcttaactg |
192 |
Q |
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| T |
23368559 |
gtagtagaaaatataatgctaatgagtatcctaagagcatgcaaatcagtagtttcggtgtcttaactg |
23368491 |
T |
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