View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16735_low_14 (Length: 538)

Name: NF16735_low_14
Description: NF16735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16735_low_14
NF16735_low_14
[»] chr2 (45 HSPs)
chr2 (9-519)||(4763249-4763760)
chr2 (16-143)||(26357575-26357699)
chr2 (25-141)||(4264167-4264280)
chr2 (27-142)||(33551078-33551190)
chr2 (25-139)||(33660458-33660569)
chr2 (28-140)||(13711465-13711574)
chr2 (13-139)||(36641988-36642111)
chr2 (24-142)||(35958908-35959023)
chr2 (25-142)||(19313851-19313965)
chr2 (25-141)||(4166922-4167035)
chr2 (13-139)||(3176941-3177064)
chr2 (28-80)||(5881597-5881649)
chr2 (25-89)||(27350028-27350092)
chr2 (13-143)||(37905707-37905833)
chr2 (25-139)||(43770929-43771039)
chr2 (13-141)||(11366459-11366584)
chr2 (13-141)||(19289401-19289521)
chr2 (13-141)||(19424706-19424831)
chr2 (27-141)||(17071829-17071940)
chr2 (13-68)||(39167441-39167496)
chr2 (13-141)||(2325448-2325573)
chr2 (53-141)||(18494386-18494471)
chr2 (271-321)||(20539703-20539753)
chr2 (247-296)||(22556965-22557015)
chr2 (25-141)||(29242228-29242341)
chr2 (25-142)||(33902067-33902179)
chr2 (13-78)||(41463928-41463993)
chr2 (91-144)||(41465506-41465559)
chr2 (28-139)||(44285951-44286059)
chr2 (13-89)||(4478418-4478494)
chr2 (25-89)||(33709322-33709386)
chr2 (25-89)||(43648335-43648399)
chr2 (250-321)||(21616742-21616813)
chr2 (251-321)||(16069263-16069333)
chr2 (29-141)||(17054190-17054299)
chr2 (25-141)||(31570824-31570937)
chr2 (250-296)||(34691813-34691859)
chr2 (250-296)||(34714225-34714271)
chr2 (257-323)||(37558955-37559021)
chr2 (91-141)||(41960883-41960933)
chr2 (252-321)||(6290137-6290206)
chr2 (93-141)||(6177775-6177823)
chr2 (252-296)||(28677914-28677958)
chr2 (93-141)||(34441921-34441969)
chr2 (106-146)||(44913657-44913697)
[»] chr3 (48 HSPs)
chr3 (13-143)||(37203056-37203183)
chr3 (13-142)||(4015450-4015576)
chr3 (25-143)||(37157697-37157811)
chr3 (28-141)||(35844317-35844427)
chr3 (13-141)||(3655262-3655387)
chr3 (17-141)||(39282644-39282764)
chr3 (25-139)||(46297834-46297945)
chr3 (13-143)||(51213041-51213168)
chr3 (25-129)||(29099358-29099459)
chr3 (13-89)||(42506135-42506211)
chr3 (28-141)||(11466815-11466925)
chr3 (26-138)||(22446138-22446247)
chr3 (25-141)||(21193597-21193710)
chr3 (25-141)||(26941332-26941445)
chr3 (25-141)||(40552331-40552444)
chr3 (13-141)||(48354932-48355057)
chr3 (13-89)||(47481562-47481638)
chr3 (13-88)||(20373356-20373431)
chr3 (7-128)||(40935995-40936113)
chr3 (25-146)||(7327554-7327673)
chr3 (25-141)||(22450959-22451072)
chr3 (25-141)||(34132926-34133039)
chr3 (93-151)||(53811976-53812034)
chr3 (25-139)||(53229224-53229336)
chr3 (25-126)||(11357436-11357535)
chr3 (17-89)||(21009866-21009938)
chr3 (25-89)||(44186573-44186637)
chr3 (26-77)||(2007985-2008036)
chr3 (239-314)||(23184069-23184144)
chr3 (25-141)||(52040994-52041108)
chr3 (239-321)||(25948884-25948966)
chr3 (91-141)||(55343419-55343469)
chr3 (13-78)||(4761709-4761774)
chr3 (266-323)||(23870583-23870640)
chr3 (241-293)||(21161498-21161550)
chr3 (250-294)||(29508451-29508495)
chr3 (250-321)||(8383237-8383308)
chr3 (25-68)||(43348319-43348362)
chr3 (250-296)||(7928455-7928501)
chr3 (27-138)||(32373466-32373572)
chr3 (50-142)||(44891497-44891585)
chr3 (237-294)||(17005614-17005671)
chr3 (26-70)||(3362312-3362356)
chr3 (273-321)||(26492236-26492284)
chr3 (257-321)||(28917981-28918045)
chr3 (93-141)||(40640634-40640682)
chr3 (93-141)||(47930666-47930714)
chr3 (106-142)||(49359641-49359677)
[»] chr1 (52 HSPs)
chr1 (15-141)||(2959744-2959867)
chr1 (26-142)||(38823209-38823322)
chr1 (13-141)||(1547283-1547408)
chr1 (13-141)||(16415641-16415767)
chr1 (26-122)||(9903122-9903215)
chr1 (25-141)||(34012444-34012557)
chr1 (26-142)||(42721034-42721147)
chr1 (25-141)||(48620633-48620746)
chr1 (25-141)||(11742417-11742530)
chr1 (25-141)||(18422647-18422760)
chr1 (13-139)||(15752027-15752150)
chr1 (26-142)||(3309143-3309255)
chr1 (13-141)||(10182063-10182188)
chr1 (13-129)||(28564836-28564949)
chr1 (12-141)||(37618948-37619076)
chr1 (25-140)||(14758038-14758150)
chr1 (248-321)||(16927191-16927264)
chr1 (26-141)||(32267030-32267142)
chr1 (25-77)||(21289729-21289781)
chr1 (28-141)||(39393379-39393489)
chr1 (25-141)||(15382929-15383042)
chr1 (13-141)||(19899824-19899949)
chr1 (25-129)||(37451294-37451395)
chr1 (13-78)||(47279245-47279310)
chr1 (239-319)||(6427332-6427412)
chr1 (13-141)||(8222127-8222249)
chr1 (25-139)||(41926161-41926272)
chr1 (250-321)||(398773-398844)
chr1 (257-324)||(38078676-38078743)
chr1 (25-128)||(4330288-4330390)
chr1 (13-140)||(10922724-10922848)
chr1 (13-62)||(23999419-23999468)
chr1 (25-70)||(27563972-27564017)
chr1 (25-78)||(40884869-40884922)
chr1 (25-89)||(3534977-3535041)
chr1 (239-295)||(8010284-8010340)
chr1 (25-77)||(27267266-27267318)
chr1 (25-147)||(30327019-30327138)
chr1 (25-143)||(31621620-31621735)
chr1 (25-89)||(32216100-32216164)
chr1 (271-323)||(46348412-46348464)
chr1 (13-60)||(27227540-27227587)
chr1 (250-321)||(38503300-38503371)
chr1 (250-321)||(52903229-52903300)
chr1 (250-324)||(6415009-6415083)
chr1 (248-298)||(11605941-11605991)
chr1 (91-141)||(22170750-22170800)
chr1 (91-141)||(30254854-30254904)
chr1 (25-62)||(7079130-7079167)
chr1 (24-53)||(38759610-38759639)
chr1 (237-293)||(16164310-16164366)
chr1 (25-77)||(51128916-51128968)
[»] chr8 (40 HSPs)
chr8 (28-141)||(16446956-16447066)
chr8 (13-141)||(27082904-27083029)
chr8 (25-141)||(34894966-34895079)
chr8 (25-141)||(34952109-34952222)
chr8 (25-141)||(36695044-36695157)
chr8 (13-152)||(37970585-37970721)
chr8 (25-142)||(6098596-6098710)
chr8 (13-141)||(1204926-1205051)
chr8 (13-145)||(10555268-10555397)
chr8 (13-144)||(12876105-12876233)
chr8 (25-143)||(13307620-13307735)
chr8 (13-142)||(23854497-23854623)
chr8 (25-139)||(465843-465954)
chr8 (25-141)||(1150183-1150296)
chr8 (25-141)||(38643977-38644090)
chr8 (25-144)||(5300024-5300140)
chr8 (25-141)||(40862418-40862532)
chr8 (13-141)||(41362517-41362639)
chr8 (25-141)||(9864147-9864260)
chr8 (13-141)||(16222862-16222987)
chr8 (248-321)||(36934650-36934723)
chr8 (26-141)||(43643674-43643786)
chr8 (257-321)||(22651956-22652020)
chr8 (24-141)||(8803887-8803997)
chr8 (13-141)||(30654649-30654774)
chr8 (250-295)||(12606837-12606882)
chr8 (13-77)||(1149698-1149762)
chr8 (250-318)||(34897068-34897136)
chr8 (247-309)||(9936806-9936868)
chr8 (93-143)||(33197889-33197939)
chr8 (91-144)||(15009238-15009291)
chr8 (250-295)||(31236585-31236630)
chr8 (13-61)||(1954056-1954104)
chr8 (14-54)||(4133077-4133117)
chr8 (25-89)||(11727072-11727136)
chr8 (237-293)||(11803267-11803323)
chr8 (239-295)||(21465418-21465474)
chr8 (257-321)||(29510319-29510383)
chr8 (93-141)||(38110353-38110401)
chr8 (101-141)||(39099260-39099300)
[»] chr5 (52 HSPs)
chr5 (13-141)||(38528287-38528411)
chr5 (26-143)||(7693228-7693342)
chr5 (25-140)||(32563150-32563262)
chr5 (25-139)||(699152-699263)
chr5 (25-139)||(5837557-5837668)
chr5 (43-141)||(13956425-13956520)
chr5 (28-141)||(9200233-9200343)
chr5 (25-142)||(35511539-35511653)
chr5 (25-141)||(19119859-19119972)
chr5 (13-141)||(39572819-39572944)
chr5 (25-142)||(23116284-23116398)
chr5 (25-141)||(5112375-5112488)
chr5 (25-141)||(36860423-36860536)
chr5 (28-139)||(26268076-26268184)
chr5 (13-139)||(27318537-27318660)
chr5 (25-143)||(36866760-36866875)
chr5 (25-141)||(8741948-8742062)
chr5 (13-141)||(12910350-12910480)
chr5 (13-88)||(24886154-24886229)
chr5 (25-141)||(1429207-1429320)
chr5 (13-141)||(30969374-30969499)
chr5 (13-141)||(35826533-35826658)
chr5 (17-141)||(22255181-22255303)
chr5 (28-139)||(25500991-25501099)
chr5 (13-89)||(33908282-33908358)
chr5 (13-142)||(14409377-14409502)
chr5 (25-142)||(40133384-40133498)
chr5 (28-143)||(22019630-22019742)
chr5 (29-140)||(31705677-31705785)
chr5 (32-142)||(15724489-15724596)
chr5 (13-147)||(31786696-31786827)
chr5 (25-72)||(8437032-8437079)
chr5 (25-59)||(15992602-15992636)
chr5 (17-141)||(22974136-22974257)
chr5 (239-293)||(38749560-38749614)
chr5 (29-78)||(6824547-6824596)
chr5 (25-78)||(25668709-25668762)
chr5 (241-293)||(5616211-5616263)
chr5 (25-61)||(21088828-21088864)
chr5 (93-141)||(22616494-22616542)
chr5 (13-143)||(5829895-5830026)
chr5 (25-141)||(27330306-27330417)
chr5 (239-321)||(15410445-15410527)
chr5 (106-139)||(7209004-7209037)
chr5 (13-78)||(14919578-14919643)
chr5 (257-294)||(15405070-15405107)
chr5 (250-295)||(23012416-23012461)
chr5 (31-88)||(42342783-42342840)
chr5 (250-346)||(2436878-2436973)
chr5 (254-294)||(22423824-22423864)
chr5 (91-143)||(26317809-26317861)
chr5 (239-323)||(43001778-43001862)
[»] scaffold0291 (1 HSPs)
scaffold0291 (13-139)||(7889-8012)
[»] chr7 (49 HSPs)
chr7 (13-141)||(7334769-7334894)
chr7 (28-143)||(12165725-12165837)
chr7 (25-142)||(5657554-5657668)
chr7 (13-141)||(30055501-30055627)
chr7 (25-143)||(37109845-37109960)
chr7 (25-146)||(4582889-4583007)
chr7 (25-141)||(21991611-21991724)
chr7 (13-145)||(37346993-37347122)
chr7 (13-139)||(11071182-11071306)
chr7 (13-142)||(27283718-27283844)
chr7 (25-141)||(17842659-17842772)
chr7 (25-141)||(32821126-32821239)
chr7 (13-141)||(41765139-41765264)
chr7 (13-140)||(24211717-24211841)
chr7 (13-140)||(38258521-38258645)
chr7 (17-77)||(9355891-9355951)
chr7 (28-145)||(6546490-6546604)
chr7 (28-141)||(12390706-12390816)
chr7 (13-142)||(34362210-34362335)
chr7 (25-141)||(31520796-31520909)
chr7 (25-140)||(48928636-48928748)
chr7 (28-142)||(8861259-8861370)
chr7 (13-141)||(18797304-18797427)
chr7 (25-127)||(22687228-22687327)
chr7 (25-139)||(27421452-27421563)
chr7 (25-146)||(32432427-32432540)
chr7 (13-141)||(26524388-26524513)
chr7 (27-146)||(44413454-44413571)
chr7 (13-78)||(29173575-29173640)
chr7 (25-142)||(10359287-10359401)
chr7 (26-139)||(23111167-23111277)
chr7 (250-321)||(26733284-26733355)
chr7 (15-77)||(38053522-38053584)
chr7 (25-141)||(43686016-43686128)
chr7 (25-125)||(48928369-48928466)
chr7 (25-78)||(26980358-26980411)
chr7 (236-293)||(35297666-35297723)
chr7 (250-315)||(42720898-42720963)
chr7 (250-321)||(14077442-14077513)
chr7 (250-321)||(14387470-14387541)
chr7 (250-321)||(19206030-19206101)
chr7 (91-145)||(8299186-8299240)
chr7 (93-139)||(19786282-19786328)
chr7 (250-295)||(24146822-24146867)
chr7 (25-140)||(33688335-33688446)
chr7 (248-293)||(38143231-38143276)
chr7 (255-319)||(1401007-1401071)
chr7 (48-146)||(31579165-31579260)
chr7 (93-141)||(40381940-40381988)
[»] chr6 (33 HSPs)
chr6 (25-141)||(8513233-8513346)
chr6 (13-141)||(1945833-1945959)
chr6 (13-141)||(4318882-4319007)
chr6 (13-142)||(7235094-7235219)
chr6 (13-141)||(5627391-5627516)
chr6 (13-141)||(18498433-18498559)
chr6 (26-141)||(3880011-3880123)
chr6 (13-78)||(15491675-15491740)
chr6 (25-139)||(6088910-6089021)
chr6 (25-139)||(29182165-29182276)
chr6 (239-321)||(15443675-15443757)
chr6 (239-283)||(11424708-11424752)
chr6 (13-142)||(33618833-33618959)
chr6 (217-295)||(24138432-24138510)
chr6 (255-323)||(16388246-16388313)
chr6 (250-321)||(13851716-13851787)
chr6 (13-141)||(7055274-7055399)
chr6 (250-324)||(20371118-20371192)
chr6 (248-294)||(24115853-24115899)
chr6 (254-292)||(26314646-26314684)
chr6 (250-296)||(30866152-30866198)
chr6 (248-294)||(33419180-33419226)
chr6 (263-304)||(2545438-2545479)
chr6 (251-296)||(21424811-21424856)
chr6 (250-295)||(33001297-33001342)
chr6 (217-321)||(3398599-3398702)
chr6 (25-77)||(6091254-6091306)
chr6 (237-321)||(10294087-10294171)
chr6 (93-141)||(11084152-11084200)
chr6 (275-323)||(17841622-17841670)
chr6 (93-141)||(19631749-19631797)
chr6 (91-139)||(30353492-30353540)
chr6 (25-143)||(33893073-33893188)
[»] chr4 (45 HSPs)
chr4 (13-141)||(19089539-19089664)
chr4 (13-141)||(25701143-25701268)
chr4 (25-142)||(39397917-39398031)
chr4 (25-142)||(55241202-55241316)
chr4 (25-141)||(30002722-30002835)
chr4 (25-144)||(7703514-7703630)
chr4 (25-139)||(36493786-36493897)
chr4 (13-141)||(37663827-37663950)
chr4 (13-139)||(47253751-47253873)
chr4 (25-142)||(49375965-49376080)
chr4 (26-139)||(17167715-17167825)
chr4 (26-139)||(17173292-17173402)
chr4 (25-142)||(28003084-28003198)
chr4 (28-141)||(35021136-35021246)
chr4 (27-140)||(37775670-37775780)
chr4 (25-140)||(4597994-4598105)
chr4 (25-139)||(34948195-34948306)
chr4 (24-141)||(34361588-34361702)
chr4 (33-141)||(4205116-4205221)
chr4 (25-141)||(35025686-35025799)
chr4 (26-141)||(37287733-37287846)
chr4 (25-141)||(38011854-38011967)
chr4 (25-127)||(46888255-46888354)
chr4 (250-321)||(44081585-44081656)
chr4 (17-141)||(32912670-32912791)
chr4 (26-141)||(25184113-25184225)
chr4 (28-139)||(27396618-27396726)
chr4 (13-78)||(50764790-50764855)
chr4 (25-89)||(23761121-23761185)
chr4 (25-141)||(29584298-29584409)
chr4 (25-139)||(33341397-33341512)
chr4 (25-128)||(32592106-32592206)
chr4 (25-115)||(54499336-54499424)
chr4 (13-141)||(55477977-55478106)
chr4 (26-70)||(9139313-9139357)
chr4 (92-140)||(51204580-51204628)
chr4 (252-295)||(35952627-35952670)
chr4 (250-296)||(3712517-3712563)
chr4 (28-89)||(879649-879710)
chr4 (264-321)||(20521871-20521928)
chr4 (93-141)||(2704512-2704560)
chr4 (25-142)||(19440746-19440861)
chr4 (278-318)||(20633468-20633508)
chr4 (257-321)||(23293001-23293065)
chr4 (93-141)||(38812260-38812308)
[»] scaffold0002 (2 HSPs)
scaffold0002 (28-117)||(94458-94544)
scaffold0002 (13-146)||(129-259)
[»] scaffold0022 (1 HSPs)
scaffold0022 (13-146)||(146076-146206)
[»] scaffold0103 (1 HSPs)
scaffold0103 (247-323)||(51789-51865)
[»] scaffold0053 (1 HSPs)
scaffold0053 (272-321)||(8778-8827)


Alignment Details
Target: chr2 (Bit Score: 420; Significance: 0; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 9 - 519
Target Start/End: Complemental strand, 4763760 - 4763249
Alignment:
Q  9 gattatactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaa 108  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| ||||||||    
T  4763760 gattatactatgggaactgaacttttgatgtcactgtacaaacagtggggtgttactcactacagttttgttgatatagtgttgttaacttcatcagaaa 4763661  T
Q  109 agtcattttgatgacttcaccgtagaattttccaaaaataaaatgtctcacttgttattgcatgcaacccatgaagcacgtgtattttttgaattagtcg 208  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4763660 agtcattttcatgacttcatcatagaattttccaaaaataaaatgtctcacttgttattgcatgcaacccatgaaacacttgtattttttgaattagtcg 4763561  T
Q  209 tgtctcgatgtcagacatatgtcatgttcaacacaacaacaacacatataattatattgaactatatgatt-ttttcaaattattagcgataacgacgtg 307  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4763560 tgtctcgatgtcagacacgtgtcatgttcaacacaacaacaacacatataattatattgaactatatgatttttttcaaattattagcgataacgacgtg 4763461  T
Q  308 tcagtgtccgtgtccggcgtacgaatccatgcttcatagcatgcaacgaataaaatttatactatcacactaattaaacaagtattttctctcaattagt 407  Q
    ||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4763460 tcagtgtccgtgtccgatgttcgaatccatgcttcatagcatgcaacgaataaaatttatactatcacgctaattaaacaagtattttctctcaattagt 4763361  T
Q  408 gtgtgtattttcgagggaagattacaatcgtcgaaaatattatgcttcgttgagaaaaatatgcatctcagcgactgcagtatattcctctccatgtgca 507  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  4763360 gtgtgtattttcgaggaaagattacaatcgtcgaaaatgttatgcttcgttgagaaaaatatgcacctcagtgactgcagtatattcctctccatgtgca 4763261  T
Q  508 tccatgcaatgc 519  Q
    ||||||||||||    
T  4763260 tccatgcaatgc 4763249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 26357699 - 26357575
Alignment:
Q  16 ctatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcatt 115  Q
    |||| ||| ||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| || |||||   ||||||||| |||||||||||||||    
T  26357699 ctataagaactgaacttttgatgtcactgtacaaacagtgggatgttactcactacagttttgatgttatag---tgttaacttcatcagaaaagtcatt 26357603  T
Q  116 ttgatgacttcaccgtagaattttccaa 143  Q
    || ||||||||||| || ||||||||||    
T  26357602 ttcatgacttcaccataaaattttccaa 26357575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 4264167 - 4264280
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| ||| ||||| || |||||   ||||||||| | ||||||||||||| ||||||||    
T  4264167 ctgaacttttgatgtcactgtacaaacagtgggatgttactcacaacacttttgatgctatag---tgttaactttaccagaaaagtcattatgatgact 4264263  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  4264264 tcaccatagaattttcc 4264280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 33551078 - 33551190
Alignment:
Q  27 gaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttc 126  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| ||||| || |||||   ||||||||| |  | |||||||||| | ||||||||    
T  33551078 gaacttttgatgtcattgtacaaacagtggggtgttactcactacatttttgatgttatag---tgttaacttcactaaaaaagtcattctcatgacttc 33551174  T
Q  127 accgtagaattttcca 142  Q
    ||||||||||||||||    
T  33551175 accgtagaattttcca 33551190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 33660458 - 33660569
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||| ||| ||||| || |||||   |||||||||||  |||||||||||||| ||||||    
T  33660458 ctgaacttttgatgccactgtacaaacagttgggtgttactcacaacacttttgatgttatag---tgttaacttaactagaaaagtcattttaatgact 33660554  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| |||||||||    
T  33660555 tcaccatagaatttt 33660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 13711574 - 13711465
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    |||||||||||||||||||||||| |||||||||| ||||| ||| ||||| || ||||    ||||||||| | ||||||||||||| |||||||||||    
T  13711574 aacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgctata---atgttaacttcaccagaaaagtcattctgatgacttca 13711478  T
Q  128 ccgtagaattttc 140  Q
    || ||||||||||    
T  13711477 ccatagaattttc 13711465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 36642111 - 36641988
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||||||||||||||||| |||||| ||| | ||| ||||| || ||||||    |||| || | ||||||||||    
T  36642111 atactatgaggactgaacttttgatgtcactgtacaaacagtgaggtgttactcgcaacacttttgatgctatagta---ttaatttcaccagaaaagtc 36642015  T
Q  113 attttgatgacttcaccgtagaatttt 139  Q
    ||| | ||||||||||| |||||||||    
T  36642014 attctcatgacttcaccatagaatttt 36641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 35959023 - 35958908
Alignment:
Q  24 gctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgac 123  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| |||| ||||  || |||||   ||  ||||| | || |||||||||||| |||||    
T  35959023 gctgaacttttaatgtcattgtacaaacagtggggtgttgctcattacattttttatgttatag---tggcaacttcaccaaaaaagtcatttttatgac 35958927  T
Q  124 ttcaccgtagaattttcca 142  Q
    |||| | ||||||||||||    
T  35958926 ttcatcatagaattttcca 35958908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 19313965 - 19313851
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||| ||| |||  |||||| ||||| ||| ||||| || |||| ||   ||||||| | ||||||||||||| | ||||||    
T  19313965 ctgaacttttgatgtcactgtataaatagtaaggtgttactcacaacacttttgatgctataatg---ttaacttcaccagaaaagtcattctaatgact 19313869  T
Q  125 tcaccgtagaattttcca 142  Q
    ||||| ||||||||||||    
T  19313868 tcaccatagaattttcca 19313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 4167035 - 4166922
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| || |||||||||||||||||||| |||   ||||| || ||||||   |  ||||||||| | |||||||||||||||  |||||    
T  4167035 ctgaacttttgatgccattgtacaaacagtggggtgttactc---acaatatttttgatactataatgttaacttcaccagaaaagtcattttcgtgact 4166939  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  4166938 tcaccatagaattttcc 4166922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 3177064 - 3176941
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| |||||||||||| | ||||| ||||  ||| ||||| |  |||||   | ||||||| ||||||||||||    
T  3177064 atactatgaggactgaacttttgatgtcattgtacaaacagttgcgtgttactcaaaacatttttgatattatag---tattaacttcatcagaaaagtc 3176968  T
Q  113 attttgatgacttcaccgtagaatttt 139  Q
    |||||  | |||||||| |||||||||    
T  3176967 attttcgtaacttcaccatagaatttt 3176941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 5881649 - 5881597
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgtt 80  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  5881649 aacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgtt 5881597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 27350028 - 27350092
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| ||| ||||| || |||||||    
T  27350028 ctgaacttttgatgtcactgtacaaacagtgtggtgttactcacaacatttttgatgctatagtg 27350092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 37905833 - 37905707
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| ||||||||| |||||||||| |||  |||| ||||  || |||||   ||||||||| | || |||| ||    
T  37905833 atactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttacattttttatgttatag---tgttaacttcacca-aaaaatc 37905738  T
Q  113 attttgatgacttcaccgtagaattttccaa 143  Q
    ||||| || |||||||| |||||||||||||    
T  37905737 atttttataacttcaccatagaattttccaa 37905707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 43770929 - 43771039
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||| ||| ||||| || |||||   ||||||||| | || |||| ||||| | ||||||    
T  43770929 ctgaacttttgatgccactgtataaacagtggggtgttactcacaacacttttgatgttatag---tgttaacttcacca-aaaaatcattctaatgact 43771024  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| |||||||||    
T  43771025 tcaccatagaatttt 43771039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 11366459 - 11366584
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    |||||||||| |||||||||||||||||| | |||||| |||| | |||| |||| |||| ||||| || |||||   |||||| || | || |||||||    
T  11366459 atactatgagggctgaacttttgatgtcattatacaaatagtgagatgttactcattacatttttgatgttatag---tgttaatttcaccaaaaaagtc 11366555  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | |||| |||||| |||||||||||    
T  11366556 attcttatgatttcaccatagaattttcc 11366584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 19289401 - 19289521
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||| ||||| || |||||||||||||| |||||||||| ||||||||| |||| || | ||||| || |||||   ||||||||| |||| |||||||    
T  19289401 atactgtgagaacttaacttttgatgtcattgtacaaacaatggggtgttactcattatatttttgatgttatag---tgttaacttcatcaaaaaagtc 19289497  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||     |||||||||| |||||||||||    
T  19289498 at-----tgacttcaccatagaattttcc 19289521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 19424706 - 19424831
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  || ||||||||||| |||| || ||||| ||||||||| ||||| ||| ||||| || |||||   ||||||||| | |||||||| |    
T  19424706 atactatgaggactaaacttttgatgccactatataaacaatggggtgttactcacaacacttttgatgttatag---tgttaacttcaccagaaaagcc 19424802  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| || ||||||||    
T  19424803 attctcatgacttcaccataaaattttcc 19424831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 17071829 - 17071940
Alignment:
Q  27 gaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttc 126  Q
    ||||||||||||||| |||||||| | || | |||| || |||||| |||||||| |||||   ||||||||| | || ||||||||||   ||||||||    
T  17071829 gaacttttgatgtcattgtacaaataatgagatgttacttactacatttttgttgttatag---tgttaacttcaccaaaaaagtcattcgcatgacttc 17071925  T
Q  127 accgtagaattttcc 141  Q
    ||| |||||||||||    
T  17071926 accatagaattttcc 17071940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 39167441 - 39167496
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcac 68  Q
    ||||||||||  ||||||||||||||||| ||||||||||||| |||||| |||||    
T  39167441 atactatgaggactgaacttttgatgtcattgtacaaacagtgaggtgttactcac 39167496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 2325448 - 2325573
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  |||||||||||||| || |||||||||| ||||||||| |||| |||| || || || ||||    ||||||||| |  |||||||||    
T  2325448 atactatgaggactgaacttttgatgccagtgtacaaacaatggggtgttactcaatacatttatgatgttata---ttgttaacttcacgagaaaagtc 2325544  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    |||   || |||||||| |||||||||||    
T  2325545 attcacataacttcaccatagaattttcc 2325573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 18494386 - 18494471
Alignment:
Q  53 gtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    |||||||||| ||||| ||| ||||| || |||||||   ||||||| | ||||||||||||||| |||||||||||  ||||||||||    
T  18494386 gtggggtgttactcacaacacttttgatgctatagtg---ttaacttcaccagaaaagtcattttcatgacttcaccacagaattttcc 18494471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 20539703 - 20539753
Alignment:
Q  271 tatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||||||||||||||||||||||||  |  |||||||||||||||||||||    
T  20539703 tatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtc 20539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 22557015 - 22556965
Alignment:
Q  247 acaacacatataattatattgaactatatgatt-ttttcaaattattagcg 296  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  22557015 acaacacatataattacattgaattatatgattattttcaaattattagcg 22556965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 29242228 - 29242341
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||  ||||||||||||||||||||||| | ||||| | ||||  || |||||   | ||||||| | || ||||  |||||| ||||||    
T  29242228 ctgaacttttgataccactgtacaaacagtggggtgttacgcactatattttttatgttatag---ttttaacttcaccaaaaaaaccattttcatgact 29242324  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  29242325 tcaccatagaattttcc 29242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 33902179 - 33902067
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| | ||||||||||||||| || ||||||||| ||||     |||  |  ||||||||| | ||||||||||||| | | ||||    
T  33902179 ctgaacttttgatgtcattttacaaacagtggggtattactcactacattttt-----tatgttagtgttaacttcaccagaaaagtcattctaacgact 33902085  T
Q  125 tcaccgtagaattttcca 142  Q
    ||| | ||||||||||||    
T  33902084 tcatcatagaattttcca 33902067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 41463928 - 41463993
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    ||||||||||   ||||||||||||| |||||||||||||||| |||||| ||||| ||| |||||    
T  41463928 atactatgaggattgaacttttgatgccactgtacaaacagtgaggtgttactcacaacacttttg 41463993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 41465559 - 41465506
Alignment:
Q  91 tgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttccaaa 144  Q
    ||||||||| | ||||||||||||| | ||||||||||| ||||||||||||||    
T  41465559 tgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttccaaa 41465506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 44286059 - 44285951
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    ||||||||||| |||| ||||||||||| | | |||||| | ||| ||||| || |||||||   ||||||| ||||||||| |||||   |||||||||    
T  44286059 aacttttgatgccactatacaaacagtgagatattgctcgcaacacttttgatgctatagtg---ttaacttcatcagaaaaatcattcgcatgacttca 44285963  T
Q  128 ccgtagaatttt 139  Q
    ||||| ||||||    
T  44285962 ccgtataatttt 44285951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 4478494 - 4478418
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    ||||||||||  || ||||||||||| ||||||||||||| ||| ||||| ||||| ||| ||||| || |||||||    
T  4478494 atactatgaggactaaacttttgatgccactgtacaaacaatggagtgttactcacaacacttttgatgttatagtg 4478418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 33709322 - 33709386
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    ||||||||||||||||||||||| |||||||| ||||| ||| | ||| ||||| || |||||||    
T  33709322 ctgaacttttgatgtcactgtactaacagtggagtgttactcgcaacacttttgatgttatagtg 33709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 43648335 - 43648399
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    ||||||||||||||||| | ||||||||||| |||||| |||| |||| ||||| || |||||||    
T  43648335 ctgaacttttgatgtcattatacaaacagtgaggtgttactcattacatttttgatgttatagtg 43648399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 21616813 - 21616742
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||||||||||| | |||| ||| ||||||| |||||||||||||| |  || |||||| |||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtc 21616742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 16069263 - 16069333
Alignment:
Q  251 cacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||| ||||||| | |||| ||||||||||||| ||||||||| || |  || ||||||||||||||||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 17054190 - 17054299
Alignment:
Q  29 acttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttcac 128  Q
    ||||||||||||| |||||||||| || | |||| || |||||| ||||| || |||||   | ||||||| | || ||||||||||   ||||||||||    
T  17054190 acttttgatgtcattgtacaaacaatgagatgttacttactacatttttgatgttatag---tattaacttcaccaaaaaagtcattcgcatgacttcac 17054286  T
Q  129 cgtagaattttcc 141  Q
    | |||||||||||    
T  17054287 catagaattttcc 17054299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 31570824 - 31570937
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||||| || ||| ||||||||||| || || ||| ||||  || |||||   |||||| || | ||||||||| ||| | || |||    
T  31570824 ctgaacttttgatgtcactataaaaatagtggggtgttacttacaacacttttaatgttatag---tgttaatttcaccagaaaagttattctcataact 31570920  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  31570921 tcaccatagaattttcc 31570937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 34691813 - 34691859
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcg 296  Q
    ||||||||||||| | |||| ||||||||||| ||||||||||||||    
T  34691813 acacatataattacactgaattatatgattttatcaaattattagcg 34691859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 34714225 - 34714271
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcg 296  Q
    ||||||||||||| | |||| ||||||||||| ||||||||||||||    
T  34714225 acacatataattacactgaattatatgattttatcaaattattagcg 34714271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 37559021 - 37558955
Alignment:
Q  257 taattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccg 323  Q
    |||||| |||||| ||| |||||||| ||||||||||||  |  || ||||||||||||||||||||    
T  37559021 taattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtccg 37558955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 41960933 - 41960883
Alignment:
Q  91 tgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||||| |||| |||||||||||  ||||||||||| |||||||||||    
T  41960933 tgttaacttcatcaaaaaagtcatttctatgacttcaccatagaattttcc 41960883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 6290206 - 6290137
Alignment:
Q  252 acatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||||||||||| | || ||||| ||||||| |||||||||||| |  ||||||| |||||| ||||||    
T  6290206 acatataattatactaaaatatataatttttttaaattattagcggtgccgacgtgccagtgttcgtgtc 6290137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 6177823 - 6177775
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| | ||||||||||||| | |||||||| ||||||||||||||    
T  6177823 ttaacttcaccagaaaagtcattctcatgacttcgccgtagaattttcc 6177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 28677958 - 28677914
Alignment:
Q  252 acatataattatattgaactatatgattttttcaaattattagcg 296  Q
    ||||||||||| | |||| ||| ||||||||||||||||||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcg 28677914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 34441921 - 34441969
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| | || |||||||||||| ||||||||||| |||||||||||    
T  34441921 ttaactttaccaaaaaagtcattttcatgacttcaccatagaattttcc 34441969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 44913697 - 44913657
Alignment:
Q  106 aaaagtcattttgatgacttcaccgtagaattttccaaaaa 146  Q
    ||||||||||||  |||||||||| ||||||||||||||||    
T  44913697 aaaagtcattttcgtgacttcaccatagaattttccaaaaa 44913657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 37203183 - 37203056
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || |||||   ||||||||| |||| |||| ||    
T  37203183 atactatgaggactgaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttatag---tgttaacttcatcaaaaaaatc 37203087  T
Q  113 attttgatgacttcaccgtagaattttccaa 143  Q
    ||||| ||||||||||| |||||||||||||    
T  37203086 atttttatgacttcaccatagaattttccaa 37203056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 4015576 - 4015450
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||||| |||||||||| ||||||| ||||| ||| ||||| || |||||   ||||||||| ||||||||||||    
T  4015576 atactatgaggactgaacttttgatgtcactctacaaacagttgggtgttactcacaacacttttgatgctatag---tgttaacttcatcagaaaagtc 4015480  T
Q  113 attttgatgacttcaccgtagaattttcca 142  Q
    ||| | ||||||||||| ||||||||||||    
T  4015479 attctcatgacttcaccatagaattttcca 4015450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 37157811 - 37157697
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||| || |||||||   ||||||| |||| ||||| |||||| ||||||    
T  37157811 ctgaacttttgatgccactgtacaa-cagtggggtgttactcactacaattttgatgttatagtg---ttaacttcatcaaaaaagccattttcatgact 37157716  T
Q  125 tcaccgtagaattttccaa 143  Q
    ||||| |||||||||||||    
T  37157715 tcaccatagaattttccaa 37157697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 35844427 - 35844317
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||| |||||||| |||||   ||||||||| | ||||||||||||| | |||||||||    
T  35844427 aacttttgatgtcactgtacaaacagtgaggtgttactcacaacatttttgttgttatag---tgttaacttcaccagaaaagtcattatcatgacttca 35844331  T
Q  128 ccgtagaattttcc 141  Q
    || |||||||||||    
T  35844330 ccatagaattttcc 35844317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 3655262 - 3655387
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| ||||||||| |||||||||| |||| |||| ||||  || |||||   ||||||||| |||| |||||||    
T  3655262 atactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatag---tgttaactttatcaaaaaagtc 3655358  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||||| ||||||||||| || ||||||||    
T  3655359 atttttatgacttcaccataaaattttcc 3655387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 39282764 - 39282644
Alignment:
Q  17 tatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattt 116  Q
    ||||||| |||||||||||||| ||||||| |||||||||||| || ||||| ||| ||||| || |||||   |||||| || ||||||||| ||||||    
T  39282764 tatgagaactgaacttttgatgccactgtataaacagtggggtattactcac-acagttttgatgttatag---tgttaattttatcagaaaaatcattt 39282669  T
Q  117 tgatgacttcaccgtagaattttcc 141  Q
    | ||||||||||| |||||||||||    
T  39282668 tcatgacttcaccatagaattttcc 39282644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 46297834 - 46297945
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||| | || |||||||||||||| ||||| ||||||| | ||||| || |||||||   ||||||| | ||||||||||||||| ||||||    
T  46297834 ctgaacttttgacgccattgtacaaacagtggtgtgttactcactatatttttgatgttatagtg---ttaacttcaccagaaaagtcattttcatgact 46297930  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| |||||||||    
T  46297931 tcaccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 51213041 - 51213168
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  || ||||||||||| || ||||||||||||||||||||||||| |||| ||||  || || ||   ||||||||| | || |||||||    
T  51213041 atactatgaggactcaacttttgatgccattgtacaaacagtggggtgttgctcattacattttttatgttacag---tgttaacttcaccaaaaaagtc 51213137  T
Q  113 attttgatgacttcaccgtagaattttccaa 143  Q
    ||| | ||||||||||| |||||||||||||    
T  51213138 attctcatgacttcaccatagaattttccaa 51213168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 29099459 - 29099358
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||||  || |||||   ||||||||| | ||||||||||||| | ||||||    
T  29099459 ctgaactttagatgtcactgtacaaacagtggggtgttactcacgacattttttatgttatag---tgttaacttcaccagaaaagtcattctaatgact 29099363  T
Q  125 tcacc 129  Q
    |||||    
T  29099362 tcacc 29099358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 42506135 - 42506211
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||| || |||| |||||||||| || |||||||    
T  42506135 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtattactcattacaattttgatgttatagtg 42506211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 11466925 - 11466815
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||| ||  | || |||||   | ||||||| ||||||||||||||| | | |||||||    
T  11466925 aacttttgatgccactgtacaaacagtggggtgttactcacaacacttgcgatgttatag---tcttaacttcatcagaaaagtcattctcaagacttca 11466829  T
Q  128 ccgtagaattttcc 141  Q
    || |||||||||||    
T  11466828 ccatagaattttcc 11466815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 22446138 - 22446247
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatc-agaaaagtcattttgatgact 124  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||| | ||||| |||||||    ||||||||| | | | |||||||||||| ||||||    
T  22446138 tgaacttttgatgccactgtacaaa-agtggggtgttactcactatatttttgatgatata---atgttaacttcaccaaaaaaagtcattttcatgact 22446233  T
Q  125 tcaccgtagaattt 138  Q
    ||||||||||||||    
T  22446234 tcaccgtagaattt 22446247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 21193710 - 21193597
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||| |   | ||   ||||||||| | ||||||||||||| | ||||||    
T  21193710 ctgaacttttgatgtcactctacaaacagtggggtgttactcacaacacttttgattcaacag---tgttaacttcaccagaaaagtcattctcatgact 21193614  T
Q  125 tcaccgtagaattttcc 141  Q
    | ||| |||||||||||    
T  21193613 ttaccatagaattttcc 21193597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 26941332 - 26941445
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| | |||||||||||||||||| |||| || ||||||| |  |||||   ||||||||| | || |||| ||||| | ||||||    
T  26941332 ctgaacttttgatgtcattatacaaacagtggggtgttactcattataattttgattttatag---tgttaacttcaccaaaaaaatcattcttatgact 26941428  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  26941429 tcaccatagaattttcc 26941445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 40552331 - 40552444
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| ||||||||| |||| ||||| |||| |||| ||||| || |||||   |||||||||   || |||||||||| | ||||||    
T  40552331 ctgaacttttgatgtcattgtacaaacggtggagtgttactcattacatttttgatgttatag---tgttaacttctccaaaaaagtcattctcatgact 40552427  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  40552428 tcaccatagaattttcc 40552444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 48355057 - 48354932
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||| |||||||||||||| || |||||||||| ||||||||| |||| |||| ||||  |  |||||   ||||||||| | || |||| ||    
T  48355057 atactatgagaactgaacttttgatgccattgtacaaacaatggggtgttactcattacatttttaatattatag---tgttaacttcaccataaaaatc 48354961  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  48354960 attctcatgacttcaccatagaattttcc 48354932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 47481638 - 47481562
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||| |||| |||| ||||| || |||||||    
T  47481638 atactatgagggctaaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtg 47481562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 20373356 - 20373431
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagt 88  Q
    |||| |||||| ||||||||||||||||| |||||||||||||||||||| |||  |||| ||||| || ||||||    
T  20373356 ataccatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcgttacatttttgatgttatagt 20373431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 40936113 - 40935995
Alignment:
Q  7 tagattatactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcaga 106  Q
    ||||| ||||||||||  |||||||||||||||||||||| ||||| || |||||| ||| | ||| ||||| || |||||   ||||||||| | ||||    
T  40936113 tagatgatactatgaggactgaacttttgatgtcactgtataaacaatgaggtgttactcgcaacacttttgatgctatag---tgttaacttcaccaga 40936017  T
Q  107 aaagtcattttgatgacttcac 128  Q
    ||| ||||| | ||||||||||    
T  40936016 aaaatcattctcatgacttcac 40935995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 7327554 - 7327673
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||| | ||| ||||| ||||| ||| ||||| || |||||||   ||||||| |  | |||||||||| | || |||    
T  7327554 ctgaacttttgatgtcactgtacaaataatggagtgttactcacaacacttttgatgttatagtg--tttaacttcactaaaaaagtcattctcataact 7327651  T
Q  125 tcaccgtagaattttccaaaaa 146  Q
    ||||| ||||||||||| ||||    
T  7327652 tcaccatagaattttcctaaaa 7327673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 22451072 - 22450959
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| |||  ||||||||||| |||| | ||||||||| ||||| || |||||   |||| |||| | ||||||| ||||| | ||||||    
T  22451072 ctgaacttttgatgccaccatacaaacagtgaggtgctactcactacacttttgatgctatag---tgttgacttcaccagaaaaatcattctcatgact 22450976  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  22450975 tcaccatagaattttcc 22450959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 34133039 - 34132926
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||| |  |||||   |||||| || | || ||||||||||||  |||||    
T  34133039 ctgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatag---tgttaatttcaccaaaaaagtcattttcgtgact 34132943  T
Q  125 tcaccgtagaattttcc 141  Q
    |||   |||||||||||    
T  34132942 tcattatagaattttcc 34132926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 53811976 - 53812034
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttccaaaaataaaa 151  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||| ||| ||||    
T  53811976 ttaacttcatcagaaaagtcattctcatgacttcaccgtagaattttccataaaaaaaa 53812034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 53229224 - 53229336
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtg-gggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgac 123  Q
    ||||||||||||||  |||||||||||| || ||||||||||||||||| ||||| || |||||   |||||| || | ||||||| | ||||| |||||    
T  53229224 ctgaacttttgatgcaactgtacaaacattgagggtgttgctcactacacttttgatgctatag---tgttaatttcaccagaaaaataattttcatgac 53229320  T
Q  124 ttcaccgtagaatttt 139  Q
    |||||| || ||||||    
T  53229321 ttcaccttaaaatttt 53229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 11357436 - 11357535
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagt-ggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgac 123  Q
    ||||||||||||||  |||||||||||||| |||||||| ||||||| | ||||| || |||||   ||||||||| | ||||||||||||| | |||||    
T  11357436 ctgaacttttgatgcaactgtacaaacagtgggggtgttactcactatacttttgatgctatag---tgttaacttcaccagaaaagtcattctcatgac 11357532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 21009866 - 21009938
Alignment:
Q  17 tatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    |||||| |||||||||||||||||| | |||||| ||||||||||| |||| |||| ||||| || |||||||    
T  21009866 tatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcattacatttttgatgttatagtg 21009938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 44186573 - 44186637
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    |||||||||||||||||||||| |||||| |||||||| ||||| ||| ||||| || |||||||    
T  44186573 ctgaacttttgatgtcactgtataaacagcggggtgttactcacaacacttttgatgctatagtg 44186637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 2008036 - 2007985
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaatttt 77  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||    
T  2008036 tgaacttttgatgccactgtacaaacagtggggtgttactcacaacactttt 2007985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 23184069 - 23184144
Alignment:
Q  239 acacaacaacaacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgt 314  Q
    |||||| | ||||||||||||||| || ||| ||||||||||| ||||||||||| | |||  |||||||||||||    
T  23184069 acacaataccaacacatataattacatagaattatatgattttgtcaaattattatcaatattgacgtgtcagtgt 23184144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 52040994 - 52041108
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagt-ggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgac 123  Q
    |||||||||||||| |||| |||||||| | |||| ||| ||||||||| ||||| || ||||||    ||||||| | ||||||||||||| | |||||    
T  52040994 ctgaacttttgatgccactatacaaacatttggggagttactcactacacttttgatgttatagta---ttaacttcaccagaaaagtcattctcatgac 52041090  T
Q  124 ttcaccgtagaattttcc 141  Q
    ||||||  ||||||||||    
T  52041091 ttcacctcagaattttcc 52041108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 25948884 - 25948966
Alignment:
Q  239 acacaacaacaacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||| ||| |||||| |||||||| | |||| ||| |||||||||||||||||||||  || || | ||||||||||||||||    
T  25948884 acacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 55343419 - 55343469
Alignment:
Q  91 tgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||||| |||||||||||||||||  |||||||||| |||||||||||    
T  55343419 tgttaacttcatcagaaaagtcattttcgtgacttcaccatagaattttcc 55343469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 4761709 - 4761774
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    ||||||||||  ||||||||||||||||| |||||||||||||  ||||| |||| |||| |||||    
T  4761709 atactatgaggactgaacttttgatgtcattgtacaaacagtgaagtgttactcattacatttttg 4761774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 23870583 - 23870640
Alignment:
Q  266 tgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccg 323  Q
    |||| |||||||||||||||||||||||||| |  ||||||||| |||||||| ||||    
T  23870583 tgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgtatccg 23870640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 21161498 - 21161550
Alignment:
Q  241 acaacaacaacacatataattatattgaactatatgattttttcaaattatta 293  Q
    |||||| | ||||||||||||| ||| |||||||| |||||||||||||||||    
T  21161498 acaacatcgacacatataattacattcaactatattattttttcaaattatta 21161550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 29508495 - 29508451
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattag 294  Q
    ||||||||||||| | |||| ||||||||||||||||||||||||    
T  29508495 acacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 8383308 - 8383237
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||| |||||||| | |||| ||||||||||| |||||||||||||| |  || ||||||| ||||||||||    
T  8383308 acacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 8383237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 43348362 - 43348319
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcac 68  Q
    |||||||||||||| ||||  |||||||||||||||||||||||    
T  43348362 ctgaacttttgatgccactaaacaaacagtggggtgttgctcac 43348319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 7928501 - 7928455
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcg 296  Q
    ||||||||||||| | |||| ||| ||||||||||||||||||||||    
T  7928501 acacatataattacactgaattatgtgattttttcaaattattagcg 7928455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 32373572 - 32373466
Alignment:
Q  27 gaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttc 126  Q
    |||||||||||| |||||||||||||||  || ||| ||||| ||| ||||| || |||||   ||||||||| ||  ||||||||||| | ||||||||    
T  32373572 gaacttttgatgccactgtacaaacagt--ggagttactcacaacacttttgatgctatag---tgttaactttattggaaaagtcattctcatgacttc 32373478  T
Q  127 accgtagaattt 138  Q
    | | ||||||||    
T  32373477 atcatagaattt 32373466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 44891585 - 44891497
Alignment:
Q  50 acagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcca 142  Q
    |||||||| |||| ||||| ||| ||||| || |||||||   ||||||| | || |||||||||||| |||||||||||||| |||||||||    
T  44891585 acagtgggatgttactcacaacacttttgatgttatagtg---ttaacttcacca-aaaagtcattttcatgacttcaccgtataattttcca 44891497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 17005614 - 17005671
Alignment:
Q  237 caacacaacaacaacacatataattatattgaactatatgattttttcaaattattag 294  Q
    |||||||||| | |||| |||||||| | |||| ||||||||||| ||||||||||||    
T  17005614 caacacaacaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 3362356 - 3362312
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcacta 70  Q
    ||||||||||||| ||||||||||| |||||| |||| |||||||    
T  3362356 tgaacttttgatgccactgtacaaatagtgggatgttactcacta 3362312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 26492236 - 26492284
Alignment:
Q  273 tatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||||||||||||||||||||||  |  || ||||||||||||||||||    
T  26492236 tatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtc 26492284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 28918045 - 28917981
Alignment:
Q  257 taattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||||| | |||| ||| ||||||||||||||||||||| ||  || ||||||||| ||||||||    
T  28918045 taattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtc 28917981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 40640634 - 40640682
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| | ||||||||||||| | ||||||||||| |||||||||||    
T  40640634 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 40640682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 47930666 - 47930714
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| | ||||||| ||||||| ||||||||||| |||||||||||    
T  47930666 ttaacttcaccagaaaaatcattttcatgacttcaccatagaattttcc 47930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 49359641 - 49359677
Alignment:
Q  106 aaaagtcattttgatgacttcaccgtagaattttcca 142  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  49359641 aaaagtcattttcatgacttcaccatagaattttcca 49359677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 2959867 - 2959744
Alignment:
Q  15 actatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcat 114  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||| || |||||| ||||| || |||||   ||||||||| ||||||||||||||    
T  2959867 actatgaggactgaacttttgatgtcactgtacaaacagtgggatgttacttactacagttttgatgttatag---tgttaacttcatcagaaaagtcat 2959771  T
Q  115 tttgatgacttcaccgtagaattttcc 141  Q
    ||| ||||||||||| |||||||||||    
T  2959770 tttcatgacttcaccatagaattttcc 2959744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 38823322 - 38823209
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    ||||||||||||| ||||||||||| ||||||||||| ||| | ||||||||| || |||||||   ||||||||| ||||||||||||| | |||||||    
T  38823322 tgaacttttgatgacactgtacaaatagtggggtgttactcgcaacaattttgatgctatagtg---ttaacttaaccagaaaagtcattctcatgactt 38823226  T
Q  126 caccgtagaattttcca 142  Q
    |||| ||||||||||||    
T  38823225 caccatagaattttcca 38823209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 1547408 - 1547283
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||||| ||| ||||  || |||||   ||||||||| | ||||||||||    
T  1547408 atactatgagaactgaacttttgatgccactgcacaaacagtggagtgttactcacaacattttttatgttatag---tgttaacttcaccagaaaagtc 1547312  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  1547311 attctcatgacttcaccatagaattttcc 1547283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 16415767 - 16415641
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtg-gggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagt 111  Q
    |||||||||  ||||||||||||||| ||||||||||||| |  ||||||| ||||||||| ||||| || |||||||   ||||||| | |||||||||    
T  16415767 atactatgatggctgaacttttgatgccactgtacaaacatttagggtgttactcactacacttttgatgctatagtg---ttaacttcaccagaaaagt 16415671  T
Q  112 cattttgatgacttcaccgtagaattttcc 141  Q
    |||| | ||||||||||| |||||||||||    
T  16415670 cattctcatgacttcaccttagaattttcc 16415641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 9903122 - 9903215
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatga 122  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||| ||||| || |||||   ||||||||| |||| |||||||||||| ||||    
T  9903122 tgaacttttgatgtcactgtacaaacagcggggtgttactcactacagttttgatgttatag---tgttaacttcatcaaaaaagtcattttcatga 9903215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 34012444 - 34012557
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| |||| |||||||||||| ||||| ||||||||| | ||| || |||||   ||||||||| |||| ||| |||||||| ||||||    
T  34012444 ctgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatag---tgttaacttcatcataaacgtcattttcatgact 34012540  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  34012541 tcaccatagaattttcc 34012557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 42721147 - 42721034
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    |||||||||||||| |||||||||||||||||||||| ||||||| | ||||  |||||||| ||   |||||| | || |||| ||||||| |||||||    
T  42721147 tgaacttttgatgttactgtacaaacagtggggtgttactcactatattttttatgatatagggc---taacttcaccaaaaaaatcattttcatgactt 42721051  T
Q  126 caccgtagaattttcca 142  Q
    |||| ||||||||||||    
T  42721050 caccatagaattttcca 42721034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 48620746 - 48620633
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| || ||||    ||||||||| |  |||||||||||||| || |||    
T  48620746 ctgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgttata---ttgttaacttcacaagaaaagtcattttaataact 48620650  T
Q  125 tcaccgtagaattttcc 141  Q
    ||| | |||||||||||    
T  48620649 tcaacatagaattttcc 48620633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 11742417 - 11742530
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||||||||||||||| || || ||| ||||| | ||||||   ||||||||| | ||||||||||||| | || |||    
T  11742417 ctgaacttttgatgtcactgtacaaacagtggggtgttacttacaacacttttgataatatag---tgttaacttcaccagaaaagtcattctcataact 11742513  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||  || ||||||||    
T  11742514 tcacgataaaattttcc 11742530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 18422760 - 18422647
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| ||||||||| |||||||||| |||  || | ||||| || |||||||   ||||||| | || |||||||||||| ||||||    
T  18422760 ctgaacttttgatgtcattgtacaaacggtggggtgttactcgttatatttttgatgttatagtg---ttaacttcaccaaaaaagtcatttttatgact 18422664  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  18422663 tcaccatagaattttcc 18422647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 15752150 - 15752027
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  |||||||||||||| || ||||||||||||| |||||| ||||||| | ||||  || |||||   ||||||||| | || |||||||    
T  15752150 atactatgaggactgaacttttgatgccattgtacaaacagtgaggtgttactcactatattttttatgttatag---tgttaacttcaccaaaaaagtc 15752054  T
Q  113 attttgatgacttcaccgtagaatttt 139  Q
    ||| | ||||||||||| |||||||||    
T  15752053 attctcatgacttcaccatagaatttt 15752027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 3309255 - 3309143
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    ||||||||||||  |||||||||||||||||| |||| ||||| ||| ||||| || |||||||   ||||||| | ||||||||||||| | |||||||    
T  3309255 tgaacttttgataccactgtacaaacagtggg-tgttactcacaacacttttgatgttatagtg---ttaactttaccagaaaagtcattctcatgactt 3309160  T
Q  126 caccgtagaattttcca 142  Q
     ||| ||||||||||||    
T  3309159 taccatagaattttcca 3309143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 10182063 - 10182188
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  |||||||||||||| ||||||||||||||||| ||||| | ||||| | ||||  || || ||   | ||||||| | || |||||||    
T  10182063 atactatgaggactgaacttttgatgccactgtacaaacagtggcgtgttacgcactatattttttatgttacag---ttttaacttcaccaaaaaagtc 10182159  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||||| ||||||||||| |||||||||||    
T  10182160 attttcatgacttcaccatagaattttcc 10182188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 28564836 - 28564949
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| ||||||||||||  |||||| |||| |||| ||||| || |||||   ||||||||| |||| |||| ||    
T  28564836 atactatgaggactgaacttttgatgtcattgtacaaacagtaaggtgttactcattacatttttgatgttatag---tgttaacttcatcaaaaaaatc 28564932  T
Q  113 attttgatgacttcacc 129  Q
    ||||| || ||||||||    
T  28564933 attttcataacttcacc 28564949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 37618948 - 37619076
Alignment:
Q  12 tatactatgagagctgaacttttgatgtcactgtacaaacagtggggtg--ttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaa 109  Q
    |||||||||||| ||||||||||||||||| | ||||||||||||||||  || |||| || | ||||| || |||||   ||||||||| | || ||||    
T  37618948 tatactatgagaactgaacttttgatgtcattttacaaacagtggggtgttttactcattaaatttttgatgttatag---tgttaacttcaccaaaaaa 37619044  T
Q  110 gtcattttgatgacttcaccgtagaattttcc 141  Q
    |||||| | || |||||||| |||||||||||    
T  37619045 gtcattcttataacttcaccatagaattttcc 37619076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 14758150 - 14758038
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||| ||||||||||| | ||| | ||||||||| ||||| || |||||   |||| |||| | ||||||||||||| | ||||||    
T  14758150 ctgaacttttgatgccaccgtacaaacagttgtgtgctactcactacacttttgatgttatag---tgttgacttcaccagaaaagtcattctcatgact 14758054  T
Q  125 tcaccgtagaattttc 140  Q
    |||||||| |||||||    
T  14758053 tcaccgtaaaattttc 14758038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 16927191 - 16927264
Alignment:
Q  248 caacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||| ||||||||| | |||| ||||||||||||||||||||||||| ||  ||||||||||||||| |||||    
T  16927191 caacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtc 16927264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 32267142 - 32267030
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||| ||||| || ||||    ||||||||| |  | |||||||||| | |||||||    
T  32267142 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttata---ttgttaacttcacaaaaaaagtcattcttatgactt 32267046  T
Q  126 caccgtagaattttcc 141  Q
    |||| || ||||||||    
T  32267045 caccataaaattttcc 32267030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 21289781 - 21289729
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaatttt 77  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  21289781 ctgaacttttgatgccactgtacaaacagtggggtgttactcactacattttt 21289729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 39393489 - 39393379
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    ||||||||||| ||||||||||||| ||  || || ||||| ||| ||||| || |||||||   ||||||| || |||||||||||| | || ||||||    
T  39393489 aacttttgatgccactgtacaaacaatgaagtattactcacaacacttttgatgctatagtg---ttaacttcattagaaaagtcattctcataacttca 39393393  T
Q  128 ccgtagaattttcc 141  Q
    ||||||||||||||    
T  39393392 ccgtagaattttcc 39393379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 15383042 - 15382929
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| || ||||||||| ||||| |||| |||| |||| ||||| || |||||   |||||| || | || |||||||||||| || |||    
T  15383042 ctgaacttttgatgacattgtacaaacggtgggatgttactcattacatttttgatgttatag---tgttaatttcaccaaaaaagtcatttttataact 15382946  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  15382945 tcaccatagaattttcc 15382929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 19899824 - 19899949
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    |||||||||| | ||||||||||||| || | ||||||||||| |||||| |||  |||| ||||| || |||||   ||||||||| | || |||| ||    
T  19899824 atactatgagggttgaacttttgatgccattctacaaacagtgaggtgttactcgttacatttttgatgttatag---tgttaacttcaccaaaaaaatc 19899920  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  19899921 attattatgacttcaccatagaattttcc 19899949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 37451395 - 37451294
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| ||||||||| || ||||||| || | |||| ||||| || |||||   ||||||||| | || |||||||||||| ||||||    
T  37451395 ctgaacttttgatgtcattgtacaaacggtagggtgttacttattacatttttgatgttatag---tgttaactttaccaaaaaagtcatttttatgact 37451299  T
Q  125 tcacc 129  Q
    |||||    
T  37451298 tcacc 37451294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 47279310 - 47279245
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    ||||||||||  ||||||||| |||| ||||||||||||||||||||||| ||||| ||| |||||    
T  47279310 atactatgaggactgaactttcgatgccactgtacaaacagtggggtgttactcacaacacttttg 47279245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 319
Target Start/End: Complemental strand, 6427412 - 6427332
Alignment:
Q  239 acacaacaacaacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtg 319  Q
    |||| ||| ||||||||||||||| |||||| ||| ||||||| |||||||||||||| |   | ||||||||||||||||    
T  6427412 acacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtg 6427332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 8222249 - 8222127
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||| |||||||||||||| || ||||   || ||| |||||| |||| |||| ||||| || |||||||   ||||||| |  | ||| |||    
T  8222249 atactatgagaactgaacttttgatgccattgta---acggtgtggtgttactcattacatttttgatgttatagtg---ttaacttcactaaaaaggtc 8222156  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||||| |||||||||||||||||||||||    
T  8222155 atttttatgacttcaccgtagaattttcc 8222127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 41926272 - 41926161
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||| ||||| |||||||||||||||||| | || ||||||| | ||||| || |||||   | ||||||| |||| |||| ||||||| || |||    
T  41926272 ctgaacttgtgatgccactgtacaaacagtgggatattactcactatatttttgatgttatag---tattaacttcatcaaaaaaatcattttcataact 41926176  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| |||||||||    
T  41926175 tcaccatagaatttt 41926161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 398773 - 398844
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||| |||||||| | |||| ||| |||||||||||||||||||||| |  || ||||||||||||||||||    
T  398773 acacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtc 398844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 38078676 - 38078743
Alignment:
Q  257 taattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccgg 324  Q
    |||||| |||||| ||| |||||||||||||||||||||  |  |||||||||||||| |||||||||    
T  38078676 taattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccgg 38078743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 4330390 - 4330288
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagt-ggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgac 123  Q
    |||||||||||||  ||||||||||||| | |||||||| ||||||||| ||||| || |||||||   ||| ||| ||||||||||||||| | || ||    
T  4330390 ctgaacttttgatcccactgtacaaacattgggggtgttactcactacacttttgatgctatagtg--tttatcttcatcagaaaagtcattctcataac 4330293  T
Q  124 ttcac 128  Q
    |||||    
T  4330292 ttcac 4330288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 10922848 - 10922724
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||   |||||||||||||||| ||||||||||||||||| || |||| |||| ||||  || |||||   ||||||||| | || |||| ||    
T  10922848 atactatgaggattgaacttttgatgtcattgtacaaacagtggggtcttactcattacattttttatgttatag---tgttaacttcaccaaaaaaatc 10922752  T
Q  113 attttgatgacttcaccgtagaattttc 140  Q
    ||| | |||| |||||| || |||||||    
T  10922751 attctcatgatttcaccataaaattttc 10922724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 23999468 - 23999419
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgtt 62  Q
    |||||||||| |||||||||||||||||| | |||||| |||||||||||    
T  23999468 atactatgagggctgaacttttgatgtcattctacaaatagtggggtgtt 23999419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 27563972 - 27564017
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcacta 70  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||    
T  27563972 ctgaacttttgatgtcactatacaaacagtggagtgttactcacta 27564017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 40884922 - 40884869
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    |||||||||||||| ||| ||||||||||||||||| | ||||||||| |||||    
T  40884922 ctgaacttttgatgccaccgtacaaacagtggggtgctactcactacacttttg 40884869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 3535041 - 3534977
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    |||||||||||||||||||| |||||||||  |||||| ||||| ||| ||||| || |||||||    
T  3535041 ctgaacttttgatgtcactgcacaaacagtaaggtgttactcacaacacttttgatgttatagtg 3534977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 8010284 - 8010340
Alignment:
Q  239 acacaacaacaacacatataattatattgaactatatgattttttcaaattattagc 295  Q
    |||||||| | |||| |||||||||| |||| ||||| |||||||||||||||||||    
T  8010284 acacaacatcgacacttataattatactgaattatataattttttcaaattattagc 8010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 27267266 - 27267318
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaatttt 77  Q
    |||||||||| ||| ||||||||||||||||||||||  ||||||||| ||||    
T  27267266 ctgaacttttaatgccactgtacaaacagtggggtgtcactcactacattttt 27267318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 30327019 - 30327138
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||  | ||||||||| || |||| || |||| |||| ||||| || |||||||   |||| || |  | |||||||||||| ||||||    
T  30327019 ctgaacttttgatgctattgtacaaacggttgggtattactcattacatttttgatgttatagtg---ttaaattcacaaaaaaagtcatttttatgact 30327115  T
Q  125 tcaccgtagaattttccaaaaat 147  Q
    ||||  |||||||||||||||||    
T  30327116 tcactatagaattttccaaaaat 30327138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 31621620 - 31621735
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||| |||||||| ||| ||||||| || |||||| | |||| ||||  |||| || ||||||| ||   |||| |  |||||||||||| | ||||||    
T  31621620 ctgaatttttgatgccaccgtacaaatagcggggtgctactcaatacacctttgatgttatagtgttg---acttcactagaaaagtcattctcatgact 31621716  T
Q  125 tcaccgtagaattttccaa 143  Q
    |||||||||||||||||||    
T  31621717 tcaccgtagaattttccaa 31621735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 32216164 - 32216100
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    |||||||||||| | || |||||||||||||| ||||| ||||||||| ||||| || |||||||    
T  32216164 ctgaacttttgacgccattgtacaaacagtggtgtgttactcactacatttttgatgttatagtg 32216100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 46348412 - 46348464
Alignment:
Q  271 tatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccg 323  Q
    |||||||||||||||||||||||||  |  || ||||||||||||||||||||    
T  46348412 tatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccg 46348464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 27227540 - 27227587
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtg 60  Q
    ||||||||||  |||||||||||||| |||||||||||||||| ||||    
T  27227540 atactatgaggactgaacttttgatgccactgtacaaacagtgaggtg 27227587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 38503371 - 38503300
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||||||||||| | |||| ||||||||||| |||||||||||||| |  ||  |||| ||||||||||||    
T  38503371 acacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtc 38503300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 52903300 - 52903229
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||||||||||| | |||| ||||||||||| | ||||||||| || || || ||||| ||||||||||||    
T  52903300 acacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtc 52903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 6415009 - 6415083
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccgg 324  Q
    |||||| |||||| | || | ||| ||||||| |||||| |||||||||  || |||||||||||||||||||||    
T  6415009 acacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtccgg 6415083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 11605941 - 11605991
Alignment:
Q  248 caacacatataattatattgaactatatgattttttcaaattattagcgat 298  Q
    |||||||| |||||  | |||| ||||||||||||||||||||||||||||    
T  11605941 caacacatgtaatttcactgaattatatgattttttcaaattattagcgat 11605991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 22170800 - 22170750
Alignment:
Q  91 tgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||||| || |||||||||||||| |||| |||||| |||||||||||    
T  22170800 tgttaacttcattagaaaagtcattttcatgatttcaccatagaattttcc 22170750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 30254904 - 30254854
Alignment:
Q  91 tgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||||| |||| |||||||||| | ||||||||||| |||||||||||    
T  30254904 tgttaacttcatcaaaaaagtcattattatgacttcaccatagaattttcc 30254854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 7079130 - 7079167
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgtt 62  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  7079130 ctgaacttttgatgtcattgtacaaacagtgaggtgtt 7079167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 38759639 - 38759610
Alignment:
Q  24 gctgaacttttgatgtcactgtacaaacag 53  Q
    ||||||||||||||||||||||||||||||    
T  38759639 gctgaacttttgatgtcactgtacaaacag 38759610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 16164310 - 16164366
Alignment:
Q  237 caacacaacaacaacacatataattatattgaactatatgattttttcaaattatta 293  Q
    |||||| ||||  ||||||||||||| ||| || ||| |||||||||||||||||||    
T  16164310 caacacgacaatgacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 51128968 - 51128916
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaatttt 77  Q
    ||||||||||||||||| ||||||||| |||| ||||| |||| |||| ||||    
T  51128968 ctgaacttttgatgtcattgtacaaacggtggagtgttactcattacattttt 51128916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 16446956 - 16447066
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    ||||||||||| || | |||||||||||||||||| ||||||||||||||| || |||||||   ||||||| ||||||||||||||||| |||||||||    
T  16446956 aacttttgatgccattatacaaacagtggggtgttactcactacaattttgatgttatagtg---ttaactttatcagaaaagtcattttcatgacttca 16447052  T
Q  128 ccgtagaattttcc 141  Q
    || |||||||||||    
T  16447053 ccatagaattttcc 16447066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 27082904 - 27083029
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  |||||||||| ||| ||||| ||||||||||||||||| ||||||||| ||||| || |||||   ||||||||| | ||||||||||    
T  27082904 atactatgaggactgaacttttaatgccactgcacaaacagtggggtgttactcactacacttttgatgctatag---tgttaacttcaccagaaaagtc 27083000  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    | | ||||||||||||| |||||||||||    
T  27083001 agtctgatgacttcaccatagaattttcc 27083029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 34895079 - 34894966
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| |||| |||||||||||| ||||| ||||||||| | ||| || |||||||   ||||||| ||||||||||||||||| ||||||    
T  34895079 ctgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtg---ttaacttcatcagaaaagtcattttcatgact 34894983  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  34894982 tcaccatagaattttcc 34894966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 34952109 - 34952222
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| ||| ||||| ||||||||   ||||||||| | ||||||||||||||| ||||||    
T  34952109 ctgaacttttgatgtcactgtacaaacagtgggctgttactcacaacacttttgatgatatag---tgttaacttgaccagaaaagtcattttaatgact 34952205  T
Q  125 tcaccgtagaattttcc 141  Q
    | ||  |||||||||||    
T  34952206 ttactatagaattttcc 34952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 36695044 - 36695157
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||| |  |||||   ||||||||| |||||||||||||||||  |||||    
T  36695044 ctgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattatag---tgttaacttcatcagaaaagtcattttcctgact 36695140  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  36695141 tcaccatagaattttcc 36695157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 37970585 - 37970721
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    |||||||||| ||||||||||||||| || |||||||||||||||||||| |||| |||| ||||| || |||||   ||||||||| | || |||||||    
T  37970585 atactatgagggctgaacttttgatggcattgtacaaacagtggggtgttactcattacatttttgatgttatag---tgttaacttcaccaaaaaagtc 37970681  T
Q  113 attttgatgacttcaccgtagaattttccaaaaataaaat 152  Q
    ||| | ||||||||||| ||||| ||| |||| |||||||    
T  37970682 attctcatgacttcaccatagaactttacaaagataaaat 37970721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 6098596 - 6098710
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| | ||||| || |||||   | ||||||| | || |||||| ||||| ||||||    
T  6098596 ctgaacttttgatgtcactgtacaaacagtggggtgttactcactatatttttgatgctatag---tattaacttcaccaaaaaagttattttcatgact 6098692  T
Q  125 tcaccgtagaattttcca 142  Q
    ||||| ||||||||||||    
T  6098693 tcaccatagaattttcca 6098710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 1205051 - 1204926
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| |||||||||||||  ||||| ||||||||| ||||  || |||||   ||||||||| | ||||||||||    
T  1205051 atactatgaggactgaacttttgatgtcattgtacaaacagtgatgtgttactcactacattttttatgttatag---tgttaacttcaccagaaaagtc 1204955  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | |||||||||||||| ||||||||    
T  1204954 attctcatgacttcaccgtaaaattttcc 1204926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 10555268 - 10555397
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||   |||||||||||||||| |||||||||||||| ||||| |||| |||| ||||  || |||||||   ||||||| | || |||||||    
T  10555268 atactatgaggattgaacttttgatgtcattgtacaaacagtggagtgttactcattacattttttatgttatagtg---ttaacttcaccaaaaaagtc 10555364  T
Q  113 attttgatgacttcaccgtagaattttccaaaa 145  Q
    ||| | |||||||||||||||||||||||||||    
T  10555365 attctcatgacttcaccgtagaattttccaaaa 10555397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 12876233 - 12876105
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||  |  |||||   ||||||||| ||||||||||||    
T  12876233 atactatgaggactgaacttttgatgtcattgtacaaacagttgggtgttactcacaacattttttatattatag---tgttaacttcatcagaaaagtc 12876137  T
Q  113 attttgatgacttcaccgtagaattttccaaa 144  Q
    |||||  |||||| ||| ||||||||||||||    
T  12876136 attttcgtgacttaaccatagaattttccaaa 12876105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 13307735 - 13307620
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||| |||| |||||| ||||| ||| ||||| || |||||   ||||||||| | ||||||| ||||| | ||||||    
T  13307735 ctgaacttttgatgtcactgtacaaatagtgaggtgttactcacaacacttttgatgttatag---tgttaacttcaccagaaaaatcattctcatgact 13307639  T
Q  125 tcaccgtagaattttccaa 143  Q
    ||||| |||||||||||||    
T  13307638 tcaccatagaattttccaa 13307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 23854497 - 23854623
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| || ||||||||| ||||||| |||| |||| ||||  || |||||   ||||||||| | || |||||||    
T  23854497 atactatgaggactgaacttttgatgtcattgcacaaacagttgggtgttactcattacattttttatgttatag---tgttaacttcaccaaaaaagtc 23854593  T
Q  113 attttgatgacttcaccgtagaattttcca 142  Q
    ||| | |||||||||||||||| |||||||    
T  23854594 attctcatgacttcaccgtagacttttcca 23854623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 465954 - 465843
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||| ||| ||||| || ||| |   ||||||||| | || |||||||||||| ||||||    
T  465954 ctgaatttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatcg---tgttaacttcaccacaaaagtcattttaatgact 465858  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| || ||||||    
T  465857 tcaccataaaatttt 465843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 1150183 - 1150296
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||  ||||||||||||||| |||| |||| |||| ||||| || |||||    |||||||| | || |||||||||| | ||||||    
T  1150183 ctgaacttttgatgtcgttgtacaaacagtgggatgttactcattacatttttgatgttatag---cgttaacttcaccaaaaaagtcattcttatgact 1150279  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  1150280 tcaccatagaattttcc 1150296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 38644090 - 38643977
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||  ||||||||||||||||| ||||| ||| ||||| || |||||   ||||||||| | || |||||||||| | |||| |    
T  38644090 ctgaacttttgatgccactagacaaacagtggggtgttactcacaacacttttgatgttatag---tgttaacttgaccaaaaaagtcattctcatgatt 38643994  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  38643993 tcaccatagaattttcc 38643977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 5300024 - 5300140
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||||||||||||| | ||| | || || ||| ||||| || |||||||   ||||||| || | |||||||||| | ||||||    
T  5300024 ctgaacttttgatgccactgtacaaacagtagagtgctacttacaacacttttgatgctatagtg---ttaacttcattaaaaaagtcattctcatgact 5300120  T
Q  125 tcaccgtagaattttccaaa 144  Q
    ||||| ||||||||||||||    
T  5300121 tcaccatagaattttccaaa 5300140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 40862532 - 40862418
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| || |||||||||||||||||||| ||||| |||  ||| |||||||  |  ||||||||| | ||||||||| |||||  |||||    
T  40862532 ctgaacttttgatgccattgtacaaacagtggggtgttactcacaaca--ttttttgatattatagtgttaacttcaccagaaaagttattttcgtgact 40862435  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||  |||||||||||    
T  40862434 tcactatagaattttcc 40862418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 41362639 - 41362517
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||||| |||||| ||||||||||| ||||||||| |||      |||  |  ||||||||| | || |||||||    
T  41362639 atactatgaggtctgaacttttgatgtcactatacaaatagtggggtgttactcactacatttt------tatgctagtgttaacttcaccaaaaaagtc 41362546  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||||| || |||||||| |||||||||||    
T  41362545 attttcataacttcaccatagaattttcc 41362517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 9864260 - 9864147
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||| |  |||||   |||||| || | || ||||||||||||  |||||    
T  9864260 ctgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatag---tgttaatttcaccaaaaaagtcattttcgtgact 9864164  T
Q  125 tcaccgtagaattttcc 141  Q
    |||   |||||||||||    
T  9864163 tcattatagaattttcc 9864147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 16222987 - 16222862
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| ||||||||| ||||||   | ||||||| | ||||  || |||||   |||||| || | ||||||||||    
T  16222987 atactatgaggactgaacttttgatgtcattgtacaaactgtggggaactactcactatattttttatgttatag---tgttaaattcaccagaaaagtc 16222891  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | |||| ||||||||||||||||||    
T  16222890 attctcatgatttcaccgtagaattttcc 16222862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 36934723 - 36934650
Alignment:
Q  248 caacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||||||||||||| | |||| ||| |||||||||| ||||||||||| |  |||||||| ||||||||||||    
T  36934723 caacacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtc 36934650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 43643674 - 43643786
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    |||||||| ||||||| |||||||||||| | ||||| |||| |||| ||||| || |||||   ||||||||| | || || ||||||| | |||||||    
T  43643674 tgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttatag---tgttaacttcaccaaaatagtcattctcatgactt 43643770  T
Q  126 caccgtagaattttcc 141  Q
    |||| |||||||||||    
T  43643771 caccatagaattttcc 43643786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 22652020 - 22651956
Alignment:
Q  257 taattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||||||||||| ||| |||||||||||||||||||||  |  || ||||||||||||||||||    
T  22652020 taattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 22651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 8803887 - 8803997
Alignment:
Q  24 gctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgac 123  Q
    |||||||||||||||||| | |||||| ||||| ||||| |||| |||| ||||| || |||||   ||||||||| | || |||||||||    |||||    
T  8803887 gctgaacttttgatgtcattctacaaatagtggagtgttactcattacatttttgatgttatag---tgttaacttcaccaaaaaagtcat----atgac 8803979  T
Q  124 ttcaccgtagaattttcc 141  Q
    |||||| |||||||||||    
T  8803980 ttcaccatagaattttcc 8803997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 30654649 - 30654774
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    |||||||||  |||||||||||||||||| |  ||||||||||||||||| |||| |||| ||||  || |||||   ||||||||| | || |||| ||    
T  30654649 atactatgaaggctgaacttttgatgtcattcaacaaacagtggggtgttactcattacattttttatgttatag---tgttaacttcaccaaaaaaatc 30654745  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    | | | ||||||||||| || ||||||||    
T  30654746 actcttatgacttcaccataaaattttcc 30654774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 12606837 - 12606882
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagc 295  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||||    
T  12606837 acacatataattacattgaattatatgattttctcaaattattagc 12606882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 1149698 - 1149762
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaatttt 77  Q
    ||||||||||  | ||||||||||||||| ||||||||||||||| |||| |||| |||| ||||    
T  1149698 atactatgaggacagaacttttgatgtcattgtacaaacagtgggttgttactcattacattttt 1149762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 34897136 - 34897068
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgt 318  Q
    ||||||||||||| | |||| ||| ||||||| |||||||||||||| |  ||||||||| ||||||||    
T  34897136 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 9936868 - 9936806
Alignment:
Q  247 acaacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtc 309  Q
    ||||||||||| ||||||||||| ||||| ||||| | ||||||||| ||||  |||||||||    
T  9936868 acaacacatatgattatattgaattatatcattttcttaaattattatcgatgtcgacgtgtc 9936806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 33197939 - 33197889
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttccaa 143  Q
    ||||||||||||||||| | ||| | ||||||||||| |||||||||||||    
T  33197939 ttaacttaatcagaaaaattattctcatgacttcaccatagaattttccaa 33197889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 15009291 - 15009238
Alignment:
Q  91 tgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttccaaa 144  Q
    ||||||||| | || |||||||||| | ||||||||||| ||||||||||||||    
T  15009291 tgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttccaaa 15009238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 31236585 - 31236630
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagc 295  Q
    ||||||||||||| |||||| ||| ||||||| |||||||||||||    
T  31236585 acacatataattacattgaattatgtgattttctcaaattattagc 31236630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 1954056 - 1954104
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgt 61  Q
    |||||||||| ||||||||||||||| |||||| |||| ||| ||||||    
T  1954056 atactatgagggctgaacttttgatgccactgtccaaatagtagggtgt 1954104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 4133077 - 4133117
Alignment:
Q  14 tactatgagagctgaacttttgatgtcactgtacaaacagt 54  Q
    |||||||||  |||||||||||||| |||||||||||||||    
T  4133077 tactatgaggactgaacttttgatgccactgtacaaacagt 4133117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 11727136 - 11727072
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    |||||||||||||| |||| |||||| ||||||||||| || || ||| ||||| || |||||||    
T  11727136 ctgaacttttgatgccactatacaaatagtggggtgttacttacaacacttttgatgttatagtg 11727072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 11803323 - 11803267
Alignment:
Q  237 caacacaacaacaacacatataattatattgaactatatgattttttcaaattatta 293  Q
    |||||||||| ||||||||||||||| | |||| ||| ||||||| | |||||||||    
T  11803323 caacacaacaccaacacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 21465474 - 21465418
Alignment:
Q  239 acacaacaacaacacatataattatattgaactatatgattttttcaaattattagc 295  Q
    |||| ||| |||||| | |||||| || ||| |||||||||||||||||||||||||    
T  21465474 acacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagc 21465418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 29510319 - 29510383
Alignment:
Q  257 taattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||||||| |||| | | |||||||||||||||||||||  |  || ||||||||||||||||||    
T  29510319 taattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 29510383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 38110401 - 38110353
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| ||||||||| ||||||| ||||||||||| || ||||||||    
T  38110401 ttaacttcatcagaaaaatcattttcatgacttcaccataaaattttcc 38110353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 39099260 - 39099300
Alignment:
Q  101 atcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||||||||||| | ||||||||||| |||||||||||    
T  39099260 atcagaaaagtcattctcatgacttcaccatagaattttcc 39099300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 4e-27; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 38528287 - 38528411
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| |||||||||| || |||||   ||||||||| |||||||||  |    
T  38528287 atactatgaga-ctgaacttttgatgtcactgtataaacaatggggtgttactcattacaattttgatgttatag---tgttaacttcatcagaaaaacc 38528382  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||||| ||||||||||| |||||||||||    
T  38528383 attttcatgacttcaccatagaattttcc 38528411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 7693342 - 7693228
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    ||||||||||||| |||||||||||||||||| |||| ||||| ||| ||||| || |||||||   ||||||| | ||||||||||||||| |||||||    
T  7693342 tgaacttttgatgccactgtacaaacagtgggatgttactcacaacacttttgatgttatagtg---ttaacttcaccagaaaagtcattttaatgactt 7693246  T
Q  126 caccgtagaattttccaa 143  Q
    |||| |||||||||||||    
T  7693245 caccatagaattttccaa 7693228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 32563262 - 32563150
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||| ||| ||||| || |||||   ||||||||| ||||||||| ||||||| ||||||    
T  32563262 ctgaacttttgatgtcactgtacagacagtggagtgttactcacaacacttttgatgttatag---tgttaacttcatcagaaaaatcattttaatgact 32563166  T
Q  125 tcaccgtagaattttc 140  Q
    ||||| ||||||||||    
T  32563165 tcaccatagaattttc 32563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 699263 - 699152
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| | ||||  || |||||   ||||||||| ||||||||||||||| | || |||    
T  699263 ctgaacttttgatgtcactgtacaaacagtggggtgttactcactagattttttatgctatag---tgttaacttcatcagaaaagtcattctcataact 699167  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| || ||||||    
T  699166 tcaccataaaatttt 699152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 5837668 - 5837557
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| ||| ||||| || |||||   ||||| ||| | ||||||||||||| | |||| |    
T  5837668 ctgaaattttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgctatag---tgttaccttcaccagaaaagtcattctcatgaat 5837572  T
Q  125 tcaccgtagaatttt 139  Q
    |||||||||||||||    
T  5837571 tcaccgtagaatttt 5837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 43 - 141
Target Start/End: Original strand, 13956425 - 13956520
Alignment:
Q  43 tgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||||||||| |||||| ||||||||| ||||| || |||||||   ||||||| || |||||||||||||| |||||||||||||||||||||||    
T  13956425 tgtacaaacagtgaggtgttactcactacagttttgatgttatagtg---ttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttcc 13956520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 9200343 - 9200233
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    |||||||||||||||||||||||| |||||||||| ||||| ||| ||||| || |||||   ||||||||| | ||||||||| ||||| |||||||||    
T  9200343 aacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgttatag---tgttaacttcaccagaaaagttattttaatgacttca 9200247  T
Q  128 ccgtagaattttcc 141  Q
    || || ||||||||    
T  9200246 ccataaaattttcc 9200233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 35511539 - 35511653
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||||| | ||| || ||||    ||||||||| |||||||| |||||||| ||||||    
T  35511539 ctgaacttttgatgtcactttacaaacagtggagtgttactcactacagtgttgatgttata---atgttaacttcatcagaaacgtcattttcatgact 35511635  T
Q  125 tcaccgtagaattttcca 142  Q
    ||||| ||| ||||||||    
T  35511636 tcaccataggattttcca 35511653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 19119972 - 19119859
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||||||||||||||| ||  | ||| ||||| || |||||   ||||||||| | || |||||||||| | ||||||    
T  19119972 ctgaacttttgatgtcactgtacaaacagtggggtgttactagcaacacttttgatgctatag---tgttaacttcaccacaaaagtcattctcatgact 19119876  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  19119875 tcaccatagaattttcc 19119859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 39572944 - 39572819
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| ||| ||||  |  |||||   | |||||||||  |||||||||    
T  39572944 atactatgagaactgaacttttgatgtcactgcacaaacagtggagtgttactcacaacattttttatattatag---tattaacttaactagaaaagtc 39572848  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  39572847 attctcatgacttcaccatagaattttcc 39572819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 23116284 - 23116398
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||| ||||| || ||||    ||||||||| || | |||||||||||| |||||     
T  23116284 ctgaacttttgattccactgtacaaacagtggggtgctactcactacagttttgatgttata---atgttaacttcataaaaaaagtcattttcatgacg 23116380  T
Q  125 tcaccgtagaattttcca 142  Q
    ||||| ||||||||||||    
T  23116381 tcaccatagaattttcca 23116398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 5112375 - 5112488
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| | ||||  || |||||   | ||||||| | || |||||||||||| ||||||    
T  5112375 ctgaacttttgatgccactgtacaaacagtggggtgttactcactatattttttatgttatag---tattaacttcaccaaaaaagtcattttcatgact 5112471  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| || ||||||||    
T  5112472 tcaccataaaattttcc 5112488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 36860536 - 36860423
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||  |  |||||   ||||||||| | ||||||| |||||||  |||||    
T  36860536 ctgaacttttgatgtcattgtacaaacagtggggtgttactcacaacattttttatactatag---tgttaacttcaccagaaaaatcattttcgtgact 36860440  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  36860439 tcaccatagaattttcc 36860423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 26268184 - 26268076
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    ||||||||||||||| ||||||||||||||||||| ||||  ||| ||||| || |||||   ||||||||| | ||||||| ||||| | |||||||||    
T  26268184 aacttttgatgtcaccgtacaaacagtggggtgttactcaaaacacttttgatgctatag---tgttaacttcaccagaaaaatcattctcatgacttca 26268088  T
Q  128 ccgtagaatttt 139  Q
    | ||||||||||    
T  26268087 ctgtagaatttt 26268076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 27318537 - 27318660
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||| ||||| || |||||||||||||| |||||||||||||| ||||| ||||||||| ||||  || | |||   ||||||||| | ||||||| ||    
T  27318537 atactgtgagaactaaacttttgatgtcattgtacaaacagtggtgtgttactcactacattttttatgttttag---tgttaacttcaccagaaaaatc 27318633  T
Q  113 attttgatgacttcaccgtagaatttt 139  Q
    ||| | ||||||||||||| |||||||    
T  27318634 attctcatgacttcaccgttgaatttt 27318660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 36866875 - 36866760
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| || |||||||||||||||||||| |||   ||||| || |||||||  |  ||||||||| | ||||||| |||||||  |||||    
T  36866875 ctgaacttttgatgccattgtacaaacagtggggtgttactc---acaatatttttgatattatagtgttaacttcaccagaaaaatcattttcgtgact 36866779  T
Q  125 tcaccgtagaattttccaa 143  Q
    ||||| |||||||||||||    
T  36866778 tcaccatagaattttccaa 36866760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 8741948 - 8742062
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtgggg-tgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgac 123  Q
    |||||||||||||| || |||||||||| ||||| |||| ||||| ||| ||||| || |||||||   ||||||| | ||||||||||||| | |||||    
T  8741948 ctgaacttttgatgccattgtacaaacaatgggggtgttactcacaacacttttgatgctatagtg---ttaacttcaccagaaaagtcattctcatgac 8742044  T
Q  124 ttcaccgtagaattttcc 141  Q
    |||||| |||||||||||    
T  8742045 ttcaccatagaattttcc 8742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 12910480 - 12910350
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtac-----aaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaa 107  Q
    ||||||||||  |||||||||||||||||||||||     ||||||||||||||| | ||||| | ||||| || ||||||    ||||||| | || ||    
T  12910480 atactatgaggactgaacttttgatgtcactgtactgtacaaacagtggggtgttacgcactatatttttgatgttatagtt---ttaacttcaccaaaa 12910384  T
Q  108 aagtcattttgatgacttcaccgtagaattttcc 141  Q
    |||||||||| ||||||||||| |||||||||||    
T  12910383 aagtcattttcatgacttcaccatagaattttcc 12910350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 24886229 - 24886154
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagt 88  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| |||| ||||| || ||||||    
T  24886229 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatagt 24886154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 1429207 - 1429320
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||| |||||||| || |||||||||||||||||||| ||||||| | ||||| || |||||   ||||||||| | || || ||||||||| ||||||    
T  1429207 ctgaatttttgatgccagtgtacaaacagtggggtgttactcactatatttttgatgctatag---tgttaacttcaccaaaagagtcattttcatgact 1429303  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||| ||||||    
T  1429304 tcaccatagatttttcc 1429320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 30969374 - 30969499
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| |||| ||| ||||||||||| ||||| ||| ||||| || |||||   ||||||||| | |||| || ||    
T  30969374 atactatgaggactgaacttttgatgtcattgtataaatagtggggtgttactcacaacacttttgatgttatag---tgttaacttcaccagataaatc 30969470  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | |||||||||  ||||||||||||    
T  30969471 attctcatgacttcattgtagaattttcc 30969499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 35826533 - 35826658
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  |||||||||||||||||||||||||||| ||  ||||| |||| |||| ||||| || |||||   | ||||||| |  | |||||||    
T  35826533 atactatgaggactgaacttttgatgtcactgtacaaacaatgaagtgttactcagtacatttttgatgttatag---tattaacttcacaaaaaaagtc 35826629  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  35826630 attatcatgacttcaccatagaattttcc 35826658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 22255303 - 22255181
Alignment:
Q  17 tatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattt 116  Q
    ||||||| |||||||||||||| || ||||||||| |||||||||| |||| ||||  ||| ||||| |  |  ||||||||| | || |||||| ||||    
T  22255303 tatgagaactgaacttttgatgccattgtacaaacggtggggtgttactcattaca--ttttttgatgttataatgttaacttcaccaaaaaagttattt 22255206  T
Q  117 tgatgacttcaccgtagaattttcc 141  Q
    | |||||||||||||||| ||||||    
T  22255205 ttatgacttcaccgtagagttttcc 22255181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 25500991 - 25501099
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    ||||||||||| || ||||||||||||| ||||||  |||| ||| ||||| || |||||||   ||||||| | ||||||||||||| | |||||||||    
T  25500991 aacttttgatggcagtgtacaaacagtgaggtgttattcacaacacttttgatgctatagtg---ttaactttaccagaaaagtcattctcatgacttca 25501087  T
Q  128 ccgtagaatttt 139  Q
    || |||||||||    
T  25501088 ccatagaatttt 25501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 33908358 - 33908282
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    ||||||||||  |||||||||||||| ||| ||||||||||||| ||| | ||||||||| ||||| ||||||||||    
T  33908358 atactatgaggactgaacttttgatgccaccgtacaaacagtggagtgctactcactacacttttgatgatatagtg 33908282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 14409377 - 14409502
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||| |||||||||||||| ||| |||  || ||||||||| | ||||||||| ||||| || |||||   |||| |||| | ||||||| ||    
T  14409377 atactatgaga-ctgaacttttgatgccaccgtattaagagtggggtgctactcactacatttttgatgttatag---tgttgacttcaccagaaaaatc 14409472  T
Q  113 attttgatgacttcaccgtagaattttcca 142  Q
    ||| | ||||||||||| ||||||||||||    
T  14409473 attctcatgacttcaccatagaattttcca 14409502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 40133498 - 40133384
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| || |||||||| ||||||||||| ||||| ||| ||||| |  ||||    ||||||||| | || ||||||||||||  |||||    
T  40133498 ctgaacttttgatgccattgtacaaatagtggggtgttactcacaacatttttgatactata---atgttaacttcaccacaaaagtcattttcgtgact 40133402  T
Q  125 tcaccgtagaattttcca 142  Q
    ||||| ||||||||||||    
T  40133401 tcaccatagaattttcca 40133384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 22019742 - 22019630
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    |||||||||||||||| |||||||| ||||||||| ||||| ||| ||||| |  |||||   | ||||||| | ||||||||||||| | || ||||||    
T  22019742 aacttttgatgtcactatacaaacaatggggtgttactcacaacacttttgattctatag---ttttaacttcaccagaaaagtcattctaataacttca 22019646  T
Q  128 ccgtagaattttccaa 143  Q
    || ||||| |||||||    
T  22019645 ccatagaaatttccaa 22019630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 31705677 - 31705785
Alignment:
Q  29 acttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttcac 128  Q
    ||||||||||||| ||||||||| || ||||||| |||  |||| ||||| || |||||||   ||||||| | || |||| ||||||| ||||||||||    
T  31705677 acttttgatgtcattgtacaaacggtagggtgttactcgttacatttttgatgttatagtg---ttaacttcaccaaaaaaatcatttttatgacttcac 31705773  T
Q  129 cgtagaattttc 140  Q
    | ||||||||||    
T  31705774 catagaattttc 31705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 15724596 - 15724489
Alignment:
Q  32 tttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttcaccgt 131  Q
    |||||||||| |||| ||||||||||||||| ||||| | | ||||| || |||||   ||||||||| | || |||||||||| | || |||||||| |    
T  15724596 tttgatgtcattgtataaacagtggggtgttactcacaaaacttttgatgttatag---tgttaacttcaccaaaaaagtcattctcataacttcaccat 15724500  T
Q  132 agaattttcca 142  Q
    |||||||||||    
T  15724499 agaattttcca 15724489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 31786696 - 31786827
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||   ||||||||||||| |||||||||||||||||||   ||||||||||| ||||  || |||||   ||||||||| | || |||||||    
T  31786696 atactatgaggattgaacttttgatgccactgtacaaacagtggggcagtgctcactacatttttcatgctatag---tgttaacttcaccaaaaaagtc 31786792  T
Q  113 attttgatgacttcaccgtagaattttccaaaaat 147  Q
    ||| | |  |||||||  |||||||||||| ||||    
T  31786793 attctcactacttcactatagaattttccataaat 31786827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 8437079 - 8437032
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactaca 72  Q
    |||||||||||||||||||||||||||| |||| |||| |||||||||    
T  8437079 ctgaacttttgatgtcactgtacaaacaatgggatgttactcactaca 8437032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 15992602 - 15992636
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggt 59  Q
    |||||||||||||||||||||||||||||||||||    
T  15992602 ctgaacttttgatgtcactgtacaaacagtggggt 15992636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 22974136 - 22974257
Alignment:
Q  17 tatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattt 116  Q
    |||||||  |||||||||||||| | ||||||||||||||| |||| |||| |||  ||||| || |||||   ||||||||| | || |||| |||||     
T  22974136 tatgagaattgaacttttgatgttattgtacaaacagtgggatgttactcattacttttttgatgttatag---tgttaacttcaccaaaaaaatcattc 22974232  T
Q  117 tgatgacttcaccgtagaattttcc 141  Q
    | || |||||||| |||||||||||    
T  22974233 tcataacttcaccatagaattttcc 22974257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 38749560 - 38749614
Alignment:
Q  239 acacaacaacaacacatataattatattgaactatatgattttttcaaattatta 293  Q
    |||||||| ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  38749560 acacaacaccaacacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 6824547 - 6824596
Alignment:
Q  29 acttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||| |||||    
T  6824547 acttttgatgtcactgtacaaacagtggagtgttactcacaacacttttg 6824596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 25668762 - 25668709
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    |||||||||||||| |||||| |||||||||||||||| ||||| ||| |||||    
T  25668762 ctgaacttttgatgccactgttcaaacagtggggtgttactcacaacacttttg 25668709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 5616211 - 5616263
Alignment:
Q  241 acaacaacaacacatataattatattgaactatatgattttttcaaattatta 293  Q
    |||||| | ||||||||||||| ||| |||||||| |||||||||||||||||    
T  5616211 acaacatcgacacatataattacattcaactatattattttttcaaattatta 5616263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 21088828 - 21088864
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgt 61  Q
    ||||||||||||||||| |||||||||||||||||||    
T  21088828 ctgaacttttgatgtcattgtacaaacagtggggtgt 21088864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 22616542 - 22616494
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||||||    
T  22616542 ttaacttcaccagaaaagtcattttcatgacttcaccatagaattttcc 22616494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 5830026 - 5829895
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgat-atagtgctgttaacttaatcagaaaagt 111  Q
    ||||||||||  || |||||||||||||| ||||||||| || ||||||| |||| |||| ||||  || | ||  |  ||||||||| | || |||| |    
T  5830026 atactatgaggactaaacttttgatgtcattgtacaaacggtagggtgttactcattacattttttatgttaattataatgttaacttcaccaaaaaaat 5829927  T
Q  112 cattttgatgacttcaccgtagaattttccaa 143  Q
    |||||| | ||||||||| |||||||||||||    
T  5829926 catttttacgacttcaccctagaattttccaa 5829895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 27330417 - 27330306
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| || ||||||||||||  |||||| ||||  ||| ||||| || |||||||   ||||||| | |||||||||||||   | ||||    
T  27330417 ctgaacttttgatgccattgtacaaacagtaaggtgttactca--acacttttgatgttatagtg---ttaacttcaccagaaaagtcattcccacgact 27330323  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  27330322 tcaccatagaattttcc 27330306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 15410445 - 15410527
Alignment:
Q  239 acacaacaacaacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||||||| |||||||||| |||| | ||||  |||| ||||| | |||||||||||| |  || ||||||||||||||||||    
T  15410445 acacaacaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtc 15410527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 7209004 - 7209037
Alignment:
Q  106 aaaagtcattttgatgacttcaccgtagaatttt 139  Q
    |||||||||||| |||||||||||||||||||||    
T  7209004 aaaagtcatttttatgacttcaccgtagaatttt 7209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 14919578 - 14919643
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    ||||||||||  ||||||||||||||||| | || |||||||| |||||| |||| |||| |||||    
T  14919578 atactatgaggactgaacttttgatgtcattatataaacagtgaggtgttactcattacatttttg 14919643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 15405070 - 15405107
Alignment:
Q  257 taattatattgaactatatgattttttcaaattattag 294  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  15405070 taattacattgaattatatgattttttcaaattattag 15405107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 23012416 - 23012461
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagc 295  Q
    ||||||||||||| ||| || ||||||||||| |||||||||||||    
T  23012416 acacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 42342840 - 42342783
Alignment:
Q  31 ttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagt 88  Q
    |||||||||||||||| |||||||||||| || ||||| ||| ||||| || ||||||    
T  42342840 ttttgatgtcactgtataaacagtggggtattactcacaacatttttgatgttatagt 42342783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 346
Target Start/End: Complemental strand, 2436973 - 2436878
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccggcgtacgaatccatgcttcatag 346  Q
    ||||||||||| | |  ||| ||| |||||||| ||||||||||||| |  || ||||||||||| ||||||||| || || |||| ||||||||||    
T  2436973 acacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgt-cgtgtccggtgtccgtatccgtgcttcatag 2436878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 22423824 - 22423864
Alignment:
Q  254 atataattatattgaactatatgattttttcaaattattag 294  Q
    |||||||||||||||| ||| ||||||| ||||||||||||    
T  22423824 atataattatattgaattatgtgattttctcaaattattag 22423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 26317809 - 26317861
Alignment:
Q  91 tgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttccaa 143  Q
    ||||||||| | || |||||||||||| ||||||||| | |||||||||||||    
T  26317809 tgttaacttcaccaaaaaagtcattttcatgacttcatcatagaattttccaa 26317861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 43001862 - 43001778
Alignment:
Q  239 acacaacaacaacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccg 323  Q
    ||||| || |||||| | |||||| | |||| ||| | |||||||||||||||||||  |  |||| ||||||||||||||||||    
T  43001862 acacatcaccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtccg 43001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 8012 - 7889
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| |||||||||| || |||||   ||||||||| |||| |||||||    
T  8012 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatgttatag---tgttaacttcatcaaaaaagtc 7916  T
Q  113 attttgatgacttcaccgtagaatttt 139  Q
    ||| | || |||||||| |||||||||    
T  7915 attcttataacttcaccatagaatttt 7889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 9e-25; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 7334894 - 7334769
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||  |||  || |||||   ||||||||| |||| |||||||    
T  7334894 atactatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatattttatgttatag---tgttaacttcatcaaaaaagtc 7334798  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | | |||||||||||||||||||||    
T  7334797 attctcacgacttcaccgtagaattttcc 7334769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 12165837 - 12165725
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||| ||| | || |||||||   ||||||| | ||||||||||||||| | |||||||    
T  12165837 aacttttgatgccactgtacaaacagtggggtgttactcacaacactttggatgctatagtg---ttaacttcaccagaaaagtcattttaacgacttca 12165741  T
Q  128 ccgtagaattttccaa 143  Q
    ||||||||||||||||    
T  12165740 ccgtagaattttccaa 12165725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 5657554 - 5657668
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||| || |||||   ||||||||| |  |||||||||||| | ||||||    
T  5657554 ctgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatag---tgttaacttcactagaaaagtcattctcatgact 5657650  T
Q  125 tcaccgtagaattttcca 142  Q
    ||||| ||||||||||||    
T  5657651 tcaccatagaattttcca 5657668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 30055627 - 30055501
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatc-agaaaagt 111  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| |||||||||| |  |||||   ||||||||| ||| | ||||||    
T  30055627 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatattatag---tgttaacttcatcaaaaaaagt 30055531  T
Q  112 cattttgatgacttcaccgtagaattttcc 141  Q
    |||| | ||||||||||| |||||||||||    
T  30055530 cattcttatgacttcaccatagaattttcc 30055501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 37109960 - 37109845
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| ||||||||| |||||||||| |||| |||| ||||  || |||||||   ||||||| | || |||||||||||| ||||||    
T  37109960 ctgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtg---ttaacttcaccaaaaaagtcatttttatgact 37109864  T
Q  125 tcaccgtagaattttccaa 143  Q
    ||||| |||||||||||||    
T  37109863 tcaccatagaattttccaa 37109845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 4583007 - 4582889
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||| ||| ||||| |  ||||||    ||||||| | |||||||||||||||  |||||    
T  4583007 ctgaacttttgatgtcattgtacaaatagtggggtgttactcacaacatttttgatactatagta---ttaacttcaccagaaaagtcattttcgtgact 4582911  T
Q  125 tcaccgtagaattttccaaaaa 146  Q
    ||||| ||||||||||||||||    
T  4582910 tcaccatagaattttccaaaaa 4582889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 21991724 - 21991611
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||||||||||||||||||||| ||| | ||||||||| || |||||   ||||||||| | || |||| ||||| | ||||||    
T  21991724 ctgaacttttgatgacactgtacaaacagtggggtgttactcgcaacaattttgatgctatag---tgttaacttcaccataaaaatcattctcatgact 21991628  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  21991627 tcaccctagaattttcc 21991611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 37347122 - 37346993
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||| |||| || | ||||| || |||||   | ||||||| | || |||| ||    
T  37347122 atactatgaggactgaacttttgatgtcactgtacaaacaatggggtgttactcattatatttttgatggtatag---tattaacttcaccaaaaaaatc 37347026  T
Q  113 attttgatgacttcaccgtagaattttccaaaa 145  Q
    ||||| ||||||||||| || ||||||||||||    
T  37347025 attttcatgacttcaccataaaattttccaaaa 37346993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 11071306 - 11071182
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagt- 111  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||| ||| | ||||| ||||||||| |   |||||| | || |||| |     
T  11071306 atactatgagaactgaacttttgatgtcactgtacaaacagtggagtgttactcgctatatttttgatgatatagtac---taactttaccaaaaaaata 11071210  T
Q  112 cattttgatgacttcaccgtagaatttt 139  Q
    |||||| ||||||||||| |||||||||    
T  11071209 cattttcatgacttcaccatagaatttt 11071182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 27283844 - 27283718
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||| ||| ||||||||| |||||||||| |||| |||| ||||| || |||||   ||||||||| | || |||| ||    
T  27283844 atactatgaggactgaacttttgatttcattgtacaaacggtggggtgttactcattacatttttgatgttatag---tgttaacttcaccaaaaaaatc 27283748  T
Q  113 attttgatgacttcaccgtagaattttcca 142  Q
    ||||| || |||||||| ||||||||||||    
T  27283747 atttttataacttcaccatagaattttcca 27283718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 17842659 - 17842772
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||| |||||||||||| ||||||||| |||||||||| |||| |||| ||||  || |||||||   ||||||| | || |||||||||||| ||||||    
T  17842659 ctgagcttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtg---ttaacttcaccaaaaaagtcatttttatgact 17842755  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  17842756 tcaccatagaattttcc 17842772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 32821126 - 32821239
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| || |||||||||||||| ||||| ||||||||| ||||| || ||||    ||||||||| | || |||| ||||||| ||||||    
T  32821126 ctgaacttttgatgccattgtacaaacagtggtgtgttactcactacatttttgatgttata---ttgttaacttcaccaaaaaaatcattttcatgact 32821222  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  32821223 tcaccatagaattttcc 32821239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 41765139 - 41765264
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||| |||||||||| ||| ||||||||||||||||| | ||||||||| ||||| || |||||   | || |||| ||||||||||||    
T  41765139 atactatgaggactggacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgctatag---tattgactttatcagaaaagtc 41765235  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| | |||||||||    
T  41765236 attctcatgacttcaccatggaattttcc 41765264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 24211841 - 24211717
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    |||||||||| ||||||||||||||| || | || ||||||| ||||||| |||| |||| ||||| || |||||   ||||||||| | || |||||||    
T  24211841 atactatgagggctgaacttttgatgccattctataaacagtagggtgttactcattacatttttgatgttatag---tgttaacttcaccaaaaaagtc 24211745  T
Q  113 attttgatgacttcaccgtagaattttc 140  Q
    ||| | ||||||||||| ||||||||||    
T  24211744 attcttatgacttcaccatagaattttc 24211717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 38258645 - 38258521
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||   |||||||||||||||| ||||||||| ||| |||||| |||| |||| ||||  || |||||||   ||||||| | || |||| ||    
T  38258645 atactatgaggattgaacttttgatgtcattgtacaaacggtgtggtgttactcattacattttttatgttatagtg---ttaacttcaccaaaaaaatc 38258549  T
Q  113 attttgatgacttcaccgtagaattttc 140  Q
    ||||| ||||||||||||||||||||||    
T  38258548 atttttatgacttcaccgtagaattttc 38258521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 9355891 - 9355951
Alignment:
Q  17 tatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaatttt 77  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  9355891 tatgagaactaaacttttgatgtcactgtacaaacagtggggtattgctcactacattttt 9355951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 6546604 - 6546490
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    |||||||||||| |||||||||| ||||||||||| ||| | ||| ||||| || |||||   ||||||||| |  |||||| ||||| | |||||||||    
T  6546604 aacttttgatgttactgtacaaatagtggggtgttactcgcaacacttttgatgctatag---tgttaacttcactagaaaaatcattcttatgacttca 6546508  T
Q  128 ccgtagaattttccaaaa 145  Q
    || |||||||||||||||    
T  6546507 ccatagaattttccaaaa 6546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 12390706 - 12390816
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    ||||||||||||||||| |||||||||||| |||| |||| |||| ||||| || |||||   ||||||||| | || |||||||  | |||||||||||    
T  12390706 aacttttgatgtcactgcacaaacagtgggatgttactcattacacttttgatgttatag---tgttaacttcaccaaaaaagtcgatctgatgacttca 12390802  T
Q  128 ccgtagaattttcc 141  Q
    || |||||||||||    
T  12390803 ccatagaattttcc 12390816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 34362210 - 34362335
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||| ||| ||||| || |||||||   |||||||    |||||||||    
T  34362210 atactatgagaactgaacttt-gatgccactgtacaaacagtggggtgttactcacaacacttttgatgctatagtg---ttaactttcctagaaaagtc 34362305  T
Q  113 attttgatgacttcaccgtagaattttcca 142  Q
    ||| | || | |||||| ||||||||||||    
T  34362306 attctcataatttcaccatagaattttcca 34362335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 31520796 - 31520909
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||| | ||||| || |||||   | ||||||| | || |||||||||||| ||||||    
T  31520796 ctgaacttttgatgtcactgtacaaacaatggagtgttactcactatatttttgatggtatag---tattaacttcaccaaaaaagtcattttcatgact 31520892  T
Q  125 tcaccgtagaattttcc 141  Q
    ||| | || ||||||||    
T  31520893 tcatcataaaattttcc 31520909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 48928636 - 48928748
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||| ||||||| ||||||||| | ||||||||| ||||| || |||||   |||| |||| | ||||||||||||| | ||||||    
T  48928636 ctgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatag---tgttgacttcaccagaaaagtcattctcatgact 48928732  T
Q  125 tcaccgtagaattttc 140  Q
    ||||| || |||||||    
T  48928733 tcaccataaaattttc 48928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 8861370 - 8861259
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    ||||||||||| |||||||||||||||||||||||  |||  ||| ||||| || |||||   |||||||||    |||||||||||| | |||||||||    
T  8861370 aacttttgatgccactgtacaaacagtggggtgttattcataacacttttgatgctatag---tgttaacttcgcgagaaaagtcattctcatgacttca 8861274  T
Q  128 ccgtagaattttcca 142  Q
    || ||||||||||||    
T  8861273 ccatagaattttcca 8861259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 18797427 - 18797304
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||   |||||||||||||||| |||||||||||||||||||| |||| |||| ||||     |||  |  ||||||||| | || |||||||    
T  18797427 atactatgaggattgaacttttgatgtcattgtacaaacagtggggtgttactcattacattttt-----tatgttagtgttaacttcaccaaaaaagtc 18797333  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  18797332 attctcatgacttcaccatagaattttcc 18797304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 22687327 - 22687228
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||  ||||| ||||||||||| ||||| ||||| ||| ||||| || |||||   ||||||||| ||||||||||||||| | ||||||    
T  22687327 ctgaacttttgataccactgcacaaacagtggagtgttactcacaacatttttgatgttatag---tgttaacttcatcagaaaagtcattctcatgact 22687231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 27421452 - 27421563
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||| ||| ||||| || |||||   ||||||||| | || |||| ||||| | | ||||    
T  27421452 ctgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatgttatag---tgttaacttcaccaaaaaaatcattatcacgact 27421548  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| |||||||||    
T  27421549 tcaccatagaatttt 27421563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 32432540 - 32432427
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||| ||| |||||     ||||   ||||||||| | ||||||| |||||||  |||||    
T  32432540 ctgaacttttgatgtcattgtacaaacaatggggtgttactcacaacatttttg-----atag---tgttaacttcaccagaaaaatcattttcgtgact 32432449  T
Q  125 tcaccgtagaattttccaaaaa 146  Q
    ||||| ||||||||||| ||||    
T  32432448 tcaccatagaattttcctaaaa 32432427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 26524388 - 26524513
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||| |||||||||| ||||| ||||||| ||| |||||  |||| ||| ||||| || |||||||   ||||| | | ||||||||||    
T  26524388 atactatgaggactggacttttgatgccactgcacaaacaatggagtgttagtcacaacatttttgatgttatagtg---ttaacatcaccagaaaagtc 26524484  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  26524485 attctcatgacttcaccatagaattttcc 26524513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 44413454 - 44413571
Alignment:
Q  27 gaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaactt-aatcagaaaagtcattttgatgactt 125  Q
    ||||||||||| ||| |||||||||| ||||||||| ||||||| | ||||| || |||||   ||||||||| | | | |||||||||||| |||||||    
T  44413454 gaacttttgatttcagtgtacaaacattggggtgttactcactatatttttgatgttatag---tgttaacttcattaaaaaaagtcattttcatgactt 44413550  T
Q  126 caccgtagaattttccaaaaa 146  Q
     ||| ||||||||| ||||||    
T  44413551 taccatagaatttttcaaaaa 44413571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 29173640 - 29173575
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    ||||||||||  ||||||||||||||||| |||||||||||||| ||||| ||||| ||| |||||    
T  29173640 atactatgaggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttg 29173575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 10359287 - 10359401
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||| ||| ||| || |||| ||||||||| ||||| || ||||      |||| || | ||||||||||||| | ||||||    
T  10359287 ctgaacttttgatgtcactgtataaatagtaggatgttactcactacacttttgatgctata---agattaattttaccagaaaagtcattatcatgact 10359383  T
Q  125 tcaccgtagaattttcca 142  Q
    ||||| ||||||||||||    
T  10359384 tcaccatagaattttcca 10359401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 23111277 - 23111167
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    ||||||||||||| || |||||||| ||||| ||||| ||||| | | ||||| || |||||||   ||||||| | ||||||| ||||||| |||||||    
T  23111277 tgaacttttgatgccattgtacaaatagtggtgtgttactcacaatatttttgatgttatagtg---ttaacttcaccagaaaaatcattttcatgactt 23111181  T
Q  126 caccgtagaatttt 139  Q
    ||||  ||||||||    
T  23111180 caccacagaatttt 23111167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 26733355 - 26733284
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||||| |||||| | |||| ||| ||||||| |||||||||||||| |  |||||||||||||||||||||    
T  26733355 acacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtc 26733284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 38053584 - 38053522
Alignment:
Q  15 actatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaatttt 77  Q
    ||||||||| ||||||||||||||||| |||||||||||| |||| || |||| |||| ||||    
T  38053584 actatgagaactgaacttttgatgtcattgtacaaacagtagggttttactcattacattttt 38053522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 43686128 - 43686016
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| || |||||||||||| ||||||| ||||| ||| ||||| |  |||||   ||||||||| | |  ||||||||||||  |||||    
T  43686128 ctgaacttttgatgccattgtacaaacagt-gggtgttactcacaacatttttgatattatag---tgttaacttcacccaaaaagtcattttcgtgact 43686033  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  43686032 tcaccatagaattttcc 43686016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 48928369 - 48928466
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||| ||||||| ||||||||| | ||||||||| ||||| || |||||   |||| |||| | ||||||||||||| | ||||||    
T  48928369 ctgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatag---tgttgacttcaccagaaaagtcattctcatgact 48928465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 26980411 - 26980358
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    |||||||||||||| |||||||||||| |||||||||| ||||| ||| |||||    
T  26980411 ctgaacttttgatgccactgtacaaaccgtggggtgttactcacaacacttttg 26980358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 35297666 - 35297723
Alignment:
Q  236 tcaacacaacaacaacacatataattatattgaactatatgattttttcaaattatta 293  Q
    ||||||| ||| ||||||||||||||||| |||| ||| ||||||| |||||||||||    
T  35297666 tcaacacgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 42720898 - 42720963
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtc 315  Q
    ||||||||||||| ||| || ||| |||||||||||||||||||||| |  | |||||||||||||    
T  42720898 acacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtc 42720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 14077442 - 14077513
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||| |||||||||||| || ||| | |||||||||||| ||||| | || |||||||| ||||||||||||    
T  14077442 acacttataattatattaaattatgttattttttcaaataattaggggtatcgacgtgtaagtgtccgtgtc 14077513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 14387470 - 14387541
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||| |||||||||||| || ||| | |||||||||||| ||||| | || |||||||| ||||||||||||    
T  14387470 acacttataattatattaaattatgttattttttcaaataattaggggtatcgacgtgtaagtgtccgtgtc 14387541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 19206101 - 19206030
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||||||||||||| |||| ||| ||||||| |||||||||||||| |  || |||||  |||||||||||    
T  19206101 acacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtc 19206030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 8299240 - 8299186
Alignment:
Q  91 tgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttccaaaa 145  Q
    ||||||||| | |||||||||||||||  |||||||||| ||||||||| |||||    
T  8299240 tgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttttcaaaa 8299186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 19786328 - 19786282
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaatttt 139  Q
    |||||||||| |||||||||||| | ||||||||| |||||||||||    
T  19786328 ttaacttaataagaaaagtcattctcatgacttcatcgtagaatttt 19786282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 24146867 - 24146822
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagc 295  Q
    |||||||||||||||||||| ||| ||||||| | |||||||||||    
T  24146867 acacatataattatattgaattatgtgattttctaaaattattagc 24146822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 33688335 - 33688446
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||| ||||||||| || |||| ||||  ||| ||||| || |||||   ||||||||| | ||||||||||||| | || |||    
T  33688335 ctgaacttttgatgccactggacaaacagtaggatgttactcataacacttttgatgttatag---tgttaactt-accagaaaagtcattctcataact 33688430  T
Q  125 tcaccgtagaattttc 140  Q
    ||||| || |||||||    
T  33688431 tcaccatataattttc 33688446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 38143276 - 38143231
Alignment:
Q  248 caacacatataattatattgaactatatgattttttcaaattatta 293  Q
    ||||||||||||||| ||| || ||| |||||||||||||||||||    
T  38143276 caacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 1401071 - 1401007
Alignment:
Q  255 tataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtg 319  Q
    |||||||| | |||| ||| ||| ||| ||||||||||||||||| |  ||||||||||||||||    
T  1401071 tataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtccgtg 1401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 31579165 - 31579260
Alignment:
Q  48 aaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttccaaaaa 146  Q
    ||||||||||||||| |||| |||| ||||| || |||||   ||||||||| | || |||| | ||| | ||||||||||| ||||||||||| ||||    
T  31579165 aaacagtggggtgttactcattacatttttgatgttatag---tgttaacttcaccaaaaaaattattcttatgacttcaccatagaattttcctaaaa 31579260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 40381988 - 40381940
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| | ||||||||||||| | || ||||||||||||||||||||    
T  40381988 ttaacttcaccagaaaagtcattctcataacttcaccgtagaattttcc 40381940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 8513346 - 8513233
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |  |||||   ||||||||| | ||||||||||||| | ||||||    
T  8513346 ctgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatattatag---tgttaacttcaccagaaaagtcattctcatgact 8513250  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  8513249 tcaccatagaattttcc 8513233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 1945959 - 1945833
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatc-agaaaagt 111  Q
    |||||||||| |||||||||||||||||| | |||||||||||||||||| |||| |||| ||||| || |||||   ||||||||| | | | ||||||    
T  1945959 atactatgagggctgaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatag---tgttaacttcaccaaaaaaagt 1945863  T
Q  112 cattttgatgacttcaccgtagaattttcc 141  Q
    |||| | |||||||||||||||||||||||    
T  1945862 cattcttatgacttcaccgtagaattttcc 1945833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 4318882 - 4319007
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||||| ||||  ||| ||||| || |||||   ||||||||| | || |||||||    
T  4318882 atactatgggggttgaacttttgatgtcactgtacaaacagtggggtgttactcataacacttttgatgttatag---tgttaacttcaccaaaaaagtc 4318978  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  4318979 attctcatgacttcaccatagaattttcc 4319007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 7235094 - 7235219
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||||| | ||||||||| ||||| || |||||   |||| |||| | | ||||||||    
T  7235094 atactatgaga-ctgaacttttgatggcaccgtacaaacagtggggtgctactcactacacttttgatgttatag---tgttgacttcaccggaaaagtc 7235189  T
Q  113 attttgatgacttcaccgtagaattttcca 142  Q
    ||| | || |||||||| ||||||||||||    
T  7235190 attctcataacttcaccatagaattttcca 7235219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 5627516 - 5627391
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    |||||||||| |||||||||||||||||| | |||||| ||||||||||| |||| || | ||||  || |||||   ||||||||| | || |||||||    
T  5627516 atactatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatag---tgttaacttcaccaaaaaagtc 5627420  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  5627419 attcttatgacttcaccttagaattttcc 5627391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 18498559 - 18498433
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagt-ggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagt 111  Q
    ||||||||||  |||||||||||||| |||||||||||| || |||||||||||||||||| ||||| || ||||    ||||||||| | ||| |||||    
T  18498559 atactatgaggactgaacttttgatgccactgtacaaactgtgggggtgttgctcactacacttttgatgctata---atgttaacttcaccaggaaagt 18498463  T
Q  112 cattttgatgacttcaccgtagaattttcc 141  Q
    |||| | ||||||||||  |||| ||||||    
T  18498462 cattctcatgacttcactatagatttttcc 18498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 3880011 - 3880123
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    |||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| |  ||||    ||||||||| | ||||||||||||| |  ||||||    
T  3880011 tgaacttttgatgtcattgtacaaacagtagggtgttactcacaacacttttgatactata---atgttaacttcaccagaaaagtcattctcgtgactt 3880107  T
Q  126 caccgtagaattttcc 141  Q
    |||| |||||||||||    
T  3880108 caccatagaattttcc 3880123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 15491740 - 15491675
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||| ||| |||||    
T  15491740 atactatgagggctgaacttttgatgccactgtacaaatagtggggtgttactcacaacacttttg 15491675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 6089021 - 6088910
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| |||| |||||||||||||| ||| ||||| ||| ||||| |  |||||   ||||||||| | ||||||| ||||| | ||||||    
T  6089021 ctgaacttttgatgccactttacaaacagtggggcgttactcacaacacttttgatactatag---tgttaacttcaccagaaaaatcattctcatgact 6088925  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| |||||||||    
T  6088924 tcaccatagaatttt 6088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 29182276 - 29182165
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||| ||| ||||| || |||||   ||||||||| ||||  ||| ||||| | ||||||    
T  29182276 ctgaacttttgatgacactgtataaacagtggggtgttactcacaacacttttgatgttatag---tgttaacttcatcaataaaatcattctcatgact 29182180  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| || ||||||    
T  29182179 tcaccataaaatttt 29182165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 15443757 - 15443675
Alignment:
Q  239 acacaacaacaacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||||||| ||||| |||||||||||||||| ||| | ||||| |||||||||||  |||  |||||||||||||| ||||||    
T  15443757 acacaacaccaacatatataattatattgaattatgttattttctcaaattattattgatgtcgacgtgtcagtgttcgtgtc 15443675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 11424708 - 11424752
Alignment:
Q  239 acacaacaacaacacatataattatattgaactatatgatttttt 283  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  11424708 acacaacaccaacacatataattatattgaattatatgatttttt 11424752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 33618959 - 33618833
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||| |||||||||||||| ||| ||||||| | |||| || | ||||||||| ||||| ||  ||||   |||| |||| | |||||||||     
T  33618959 atactatgagaactgaacttttgatgccaccgtacaaataatgggttgctactcactacacttttgatgcgatag---tgttgacttcaccagaaaagta 33618863  T
Q  113 attttgatgacttcaccgtagaattttcca 142  Q
     ||   ||||||||||||||||||||||||    
T  33618862 tttcccatgacttcaccgtagaattttcca 33618833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 24138510 - 24138432
Alignment:
Q  217 tgtcagacatatgtcatgttcaacacaacaacaacacatataattatattgaactatatgattttttcaaattattagc 295  Q
    |||||||||  |||||||| |||||||||| | | |||||||| || | | || |||||||||||||||||||||||||    
T  24138510 tgtcagacacgtgtcatgtccaacacaacaccgatacatataaatacacttaattatatgattttttcaaattattagc 24138432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 16388246 - 16388313
Alignment:
Q  255 tataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccg 323  Q
    |||||||| | |||| ||| |||||||||||||||||| ||  || |||||||||||||||||||||||    
T  16388246 tataattacactgaattatgtgattttttcaaattatttgct-tatcgacgtgtcagtgtccgtgtccg 16388313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 13851787 - 13851716
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||||||||||| | |||| ||  | ||||| |||||||||||||| |  |||||||||||||||||||||    
T  13851787 acacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtc 13851716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 7055274 - 7055399
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    |||||||||| |||||||||||||||||| | |||||| |||| |||||| || | || | ||||  || |||||   ||||||||| | || |||| ||    
T  7055274 atactatgagggctgaacttttgatgtcattctacaaatagtgaggtgttactaattatattttttatgttatag---tgttaacttcaccaaaaaaatc 7055370  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| || ||||||||    
T  7055371 attcttatgacttcaccataaaattttcc 7055399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 20371118 - 20371192
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccgg 324  Q
    ||||||||||| | |||||  ||| ||||||| |||||||||||||| |  || ||||||| |||||||||||||    
T  20371118 acacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtccgg 20371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 24115853 - 24115899
Alignment:
Q  248 caacacatataattatattgaactatatgattttttcaaattattag 294  Q
    ||||| |||||||||||||||| ||| ||||||||| ||||||||||    
T  24115853 caacatatataattatattgaattatgtgattttttgaaattattag 24115899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 26314646 - 26314684
Alignment:
Q  254 atataattatattgaactatatgattttttcaaattatt 292  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  26314646 atataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 30866152 - 30866198
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcg 296  Q
    ||||||||||||| |||||| ||| ||||||| ||||||||||||||    
T  30866152 acacatataattacattgaattatgtgattttctcaaattattagcg 30866198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 33419226 - 33419180
Alignment:
Q  248 caacacatataattatattgaactatatgattttttcaaattattag 294  Q
    ||||||||||||||| |||||| ||||| | ||||||||||||||||    
T  33419226 caacacatataattacattgaattatatcaatttttcaaattattag 33419180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 2545479 - 2545438
Alignment:
Q  263 tattgaactatatgattttttcaaattattagcgataacgac 304  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||    
T  2545479 tattgaactatatgattttatcaaattattatcgatatcgac 2545438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 21424811 - 21424856
Alignment:
Q  251 cacatataattatattgaactatatgattttttcaaattattagcg 296  Q
    ||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  21424811 cacatataaatatattgacttatgtgattttttcaaattattagcg 21424856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 33001297 - 33001342
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagc 295  Q
    ||||||||||||| ||| || ||| |||||||||||||||||||||    
T  33001297 acacatataattacatttaattatgtgattttttcaaattattagc 33001342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 321
Target Start/End: Complemental strand, 3398702 - 3398599
Alignment:
Q  217 tgtcagacatatgtcatgttcaacacaacaacaacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtcc 316  Q
    |||| ||||| |||| ||| |||||| ||| | | || |||||||| | |||| |||||||||||| ||||||||||||  |  || |||||||||||||    
T  3398702 tgtcggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattatatgattttt-caaattattagctgtgtcggcgtgtcagtgtcc 3398604  T
Q  317 gtgtc 321  Q
    |||||    
T  3398603 gtgtc 3398599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 6091254 - 6091306
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaatttt 77  Q
    |||||||||||||| || |||||||||| ||| ||||| ||||||||| ||||    
T  6091254 ctgaacttttgatggcattgtacaaacaatggtgtgttactcactacattttt 6091306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 10294171 - 10294087
Alignment:
Q  237 caacacaacaacaacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||||| ||| | ||||||||||||| |||||| |||  |||| | |||||||||||||| || || | ||||||| ||||||||    
T  10294171 caacacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtc 10294087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 11084152 - 11084200
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| | ||||||||| ||||| ||||||||||| |||||||||||    
T  11084152 ttaactttaccagaaaagttattttcatgacttcaccatagaattttcc 11084200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 17841622 - 17841670
Alignment:
Q  275 tgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccg 323  Q
    |||||||||||||||||||||  |  || ||||||||||||||||||||    
T  17841622 tgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccg 17841670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 19631797 - 19631749
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| | ||||||||||||| | ||||||||||| |||||||||||    
T  19631797 ttaacttcaccagaaaagtcattcttatgacttcaccatagaattttcc 19631749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 30353492 - 30353540
Alignment:
Q  91 tgttaacttaatcagaaaagtcattttgatgacttcaccgtagaatttt 139  Q
    ||||||||| | ||||||||||||| | ||||||||||| |||||||||    
T  30353492 tgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 30353540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 33893073 - 33893188
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||| || ||| |||||||| ||||||||||| ||||| ||| ||||| || |||||||   ||||||| |  | |||| | ||| | ||||||    
T  33893073 ctgaacttttaatatcattgtacaaatagtggggtgttactcacaacacttttgatgttatagtg---ttaacttcactaaaaaaattattctaatgact 33893169  T
Q  125 tcaccgtagaattttccaa 143  Q
    | ||| |||||||||||||    
T  33893170 ttaccatagaattttccaa 33893188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 19089539 - 19089664
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| | |||||||||||||||||| |||| |||||||||| |  |||||   ||||||||| |||| ||||||     
T  19089539 atactatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattacaattttgatattatag---tgttaacttcatcaaaaaagtt 19089635  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  19089636 attcttatgacttcaccatagaattttcc 19089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 25701143 - 25701268
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| || ||||    ||||||||| | || |||||||    
T  25701143 atactatgaggactgaacttttgatgtcactgtacaaacagtagggtgttactcactacacttttgatgttata---atgttaactttaccaaaaaagtc 25701239  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| || ||||||||    
T  25701240 attatcatgacttcaccataaaattttcc 25701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 39398031 - 39397917
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| ||| ||||  || |||||   ||||||||| | || |||||||||| | ||||||    
T  39398031 ctgaacttttgatgtcactgtacaaacaatggggtgttactcacaacacttttaatgttatag---tgttaacttcaccataaaagtcattctaatgact 39397935  T
Q  125 tcaccgtagaattttcca 142  Q
    ||||| ||||||||||||    
T  39397934 tcaccatagaattttcca 39397917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 55241202 - 55241316
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||||||||||||||||||||| ||| | ||||||||| | ||||||   | ||||||| |  |||||||||||| | ||||||    
T  55241202 ctgaacttttgatgccactgtacaaacagtggggtgttactcgcaacaattttgataatatag---tattaacttcactagaaaagtcattctcatgact 55241298  T
Q  125 tcaccgtagaattttcca 142  Q
    ||||| ||||||||||||    
T  55241299 tcaccatagaattttcca 55241316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 30002722 - 30002835
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| ||| ||||| || || ||   ||||||||| | ||||||| ||||||| ||||||    
T  30002722 ctgaacttttgatgtcactgtacaaacagtgaggtgttactcacaacacttttgatgctacag---tgttaacttcaccagaaaaatcattttaatgact 30002818  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||| ||||||    
T  30002819 tcaccatagagttttcc 30002835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 7703630 - 7703514
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||| ||||||||||||||||||| || || ||| ||||| || |||||   ||||||||| | ||||||||||||| | ||||||    
T  7703630 ctgaacttttgatgtcaccgtacaaacagtggggtgttactgacaacacttttgatgttatag---tgttaacttcaccagaaaagtcattctcatgact 7703534  T
Q  125 tcaccgtagaattttccaaa 144  Q
    | | | ||||||||||||||    
T  7703533 ttaacatagaattttccaaa 7703514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 36493786 - 36493897
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| | ||||| || |||||   | ||||||| | || |||||| ||||| ||||||    
T  36493786 ctgaacttttgatgtcactgtacaaacaatggggtgttactcactatatttttgatggtatag---tattaacttcaccaaaaaagttattttcatgact 36493882  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| |||||||||    
T  36493883 tcaccatagaatttt 36493897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 37663827 - 37663950
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| |||| ||||  || ||      ||||||||| |||| |||||||    
T  37663827 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacagttttaatgtta-----gtgttaacttcatcaaaaaagtc 37663921  T
Q  113 attttgatgacttcaccgtagaattttcc 141  Q
    ||| | ||||||||||| |||||||||||    
T  37663922 attcttatgacttcaccatagaattttcc 37663950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 47253873 - 47253751
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  |||||||||||||||||||||| ||||| | ||||||| ||||| ||| ||||| ||||||||   ||||||||| | || |||||||    
T  47253873 atactatgaggactgaacttttgatgtcactgtataaacaat-gggtgttactcacaacacttttgatgatatag---tgttaacttcaccaaaaaagtc 47253778  T
Q  113 attttgatgacttcaccgtagaatttt 139  Q
    ||| | ||||||||||| |||||||||    
T  47253777 attctcatgacttcaccatagaatttt 47253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 49376080 - 49375965
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcag-aaaagtcattttgatgac 123  Q
    |||||||||||||| |||||||||| |||||||||||| ||||| ||| ||||| || ||||    ||||||||| | ||| |||||||||| | |||||    
T  49376080 ctgaacttttgatgccactgtacaagcagtggggtgttactcacgacacttttgatgctata---atgttaacttcaccagaaaaagtcattctcatgac 49375984  T
Q  124 ttcaccgtagaattttcca 142  Q
    |||||||||||||||||||    
T  49375983 ttcaccgtagaattttcca 49375965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 17167825 - 17167715
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    |||||||||||||||| |||||||||||||||||||| ||||| |||   || |||||||  |  ||||||||| |||||||||||||||||  | ||||    
T  17167825 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaaca---tttttgatattataatgttaacttcatcagaaaagtcattttcgtaactt 17167729  T
Q  126 caccgtagaatttt 139  Q
    |||| |||||||||    
T  17167728 caccatagaatttt 17167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 17173402 - 17173292
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    |||||||||||||||| |||||||||||||||||||| ||||| |||   || |||||||  |  ||||||||| |||||||||||||||||  | ||||    
T  17173402 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaaca---tttttgatattataatgttaacttcatcagaaaagtcattttcgtaactt 17173306  T
Q  126 caccgtagaatttt 139  Q
    |||| |||||||||    
T  17173305 caccatagaatttt 17173292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 28003084 - 28003198
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||||||||||||||||| ||  | || |||||| ||||| || |||||   |||| |||| | ||||||||||||| | ||||||    
T  28003084 ctgaacttttgatgtcactgtacaaacagtggagtactactgactacacttttgatgctatag---tgttgacttcaccagaaaagtcattctcatgact 28003180  T
Q  125 tcaccgtagaattttcca 142  Q
    ||||| ||||||||||||    
T  28003181 tcaccatagaattttcca 28003198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 35021136 - 35021246
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    ||||||||| | || |||||||||||||| ||||| ||||||||| ||||| || |||| ||   ||||||| | ||||||||||||||| |||||||||    
T  35021136 aacttttgacgccaatgtacaaacagtggtgtgttactcactacatttttgatgttataatg---ttaacttcaccagaaaagtcattttcatgacttca 35021232  T
Q  128 ccgtagaattttcc 141  Q
    || |||||||||||    
T  35021233 ccatagaattttcc 35021246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 37775780 - 37775670
Alignment:
Q  27 gaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttc 126  Q
    |||||||||||| ||||||||||||||||||||||| ||||| ||| ||||  |  ||||||||   |||||| | || |||| ||||||| ||||||||    
T  37775780 gaacttttgatgccactgtacaaacagtggggtgttactcacaacatttttaatattatagtgc---taacttcaccaaaaaaatcattttaatgacttc 37775684  T
Q  127 accgtagaattttc 140  Q
    ||||||||||||||    
T  37775683 accgtagaattttc 37775670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 4598105 - 4597994
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| || | |||| || |||||   ||||||||| | ||||||||||||| | ||||||    
T  4598105 ctgaacttttgatgccactgtacaaacagtggggtgttactcacaac-actttgatgttatag---tgttaacttcaccagaaaagtcattctaatgact 4598010  T
Q  125 tcaccgtagaattttc 140  Q
    ||||| || |||||||    
T  4598009 tcaccataaaattttc 4597994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 34948195 - 34948306
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| |||| |||||||||||||||||| ||||| ||| ||||| || |||||   |||||||||   ||||||||||||| | ||||||    
T  34948195 ctgaacttttgatgccactttacaaacagtggggtgttactcacaacacttttgatgttatag---tgttaacttcgccagaaaagtcattctcatgact 34948291  T
Q  125 tcaccgtagaatttt 139  Q
    ||||| || ||||||    
T  34948292 tcaccataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 34361588 - 34361702
Alignment:
Q  24 gctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgac 123  Q
    ||||||||||| |||||| | |||||||||||||||||| |||| |||| ||||  || |||||   ||||||||| | || |||||||||| | |||||    
T  34361588 gctgaacttttaatgtcattctacaaacagtggggtgttactcattacattttttatgttatag---tgttaacttcaccaaaaaagtcattcttatgac 34361684  T
Q  124 ttcaccgtagaattttcc 141  Q
    |||||| |||||||||||    
T  34361685 ttcaccatagaattttcc 34361702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 4205221 - 4205116
Alignment:
Q  33 ttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttcaccgta 132  Q
    ||||||||| ||||||||||||||||||||  |||  ||| ||||| |  |||||||   ||||||| |||||||||||||||||  |||||||||| ||    
T  4205221 ttgatgtcattgtacaaacagtggggtgttattcagaacatttttgatattatagtg---ttaacttcatcagaaaagtcattttcctgacttcaccata 4205125  T
Q  133 gaattttcc 141  Q
    |||||||||    
T  4205124 gaattttcc 4205116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 35025686 - 35025799
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||||||  ||| ||||||||||||| | ||||||||| ||||| || |||||   |||| |||| | ||||||| ||||||| ||||||    
T  35025686 ctgaacttttgatgtcaacgtataaacagtggggtgctactcactacacttttgatgctatag---tgttgacttcaccagaaaaatcattttcatgact 35025782  T
Q  125 tcaccgtagaattttcc 141  Q
    ||| | |||||||||||    
T  35025783 tcagcatagaattttcc 35025799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 37287846 - 37287733
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatc-agaaaagtcattttgatgact 124  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||| || |||||   ||||||||| | | | |||||||||| | || |||    
T  37287846 tgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatag---tgttaactttaccaaaaaaagtcattctcattact 37287750  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  37287749 tcaccatagaattttcc 37287733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 38011967 - 38011854
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| ||| ||||||||||||||||| |  |||||||| ||||| || |||||   |||| |||| | ||||||||||||| | |||| |    
T  38011967 ctgaacttttgatggcaccgtacaaacagtggggtgctattcactacacttttgatgttatag---tgttgacttcaccagaaaagtcattctcatgatt 38011871  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  38011870 tcaccatagaattttcc 38011854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 46888255 - 46888354
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| | ||||||||| |||||||| || ||||||||||||||| || |||||   | ||||||| ||||||||||| |||||  |||||    
T  46888255 ctgaacttttgatgccgctgtacaaatagtggggtattactcactacaattttgatgttatag---tattaacttcatcagaaaagttattttcttgact 46888351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 44081585 - 44081656
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||||||||||| ||| || ||||||||||||||||||||||| ||||| ||  |||||||||||| ||||    
T  44081585 acacatataattacattaaattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtc 44081656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 32912670 - 32912791
Alignment:
Q  17 tatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattt 116  Q
    |||||| |||||||||||||| ||| | |||||| | | ||||||| |||| |||| ||||| || |||||||   ||||||| | || ||||||||||     
T  32912670 tatgagtgctgaacttttgatatcattctacaaatactagggtgttactcattacatttttgatgttatagtg---ttaacttcaccaaaaaagtcattc 32912766  T
Q  117 tgatgacttcaccgtagaattttcc 141  Q
    | ||||||||||| |||||||||||    
T  32912767 ttatgacttcaccatagaattttcc 32912791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 25184225 - 25184113
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgactt 125  Q
    |||||||| ||||||| |||||||||||| | ||||| |||| |||| ||||| || |||||   ||||||||| | || || ||||||| | |||||||    
T  25184225 tgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttatag---tgttaacttcaccaaaatagtcattctcatgactt 25184129  T
Q  126 caccgtagaattttcc 141  Q
    |||| |||||||||||    
T  25184128 caccatagaattttcc 25184113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 27396726 - 27396618
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgacttca 127  Q
    |||||||||||||| |||||||||||| ||||||| ||||  ||| ||||  || |||| ||   ||||||| | ||||||||||||| | |||||||||    
T  27396726 aacttttgatgtcattgtacaaacagtagggtgttactcataacacttttaatgctataatg---ttaacttcaccagaaaagtcattctcatgacttca 27396630  T
Q  128 ccgtagaatttt 139  Q
    || |||||||||    
T  27396629 ccatagaatttt 27396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 50764855 - 50764790
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttg 78  Q
    ||||||||||   ||||||||||||||||| ||||||||||||||||||| ||||| ||| |||||    
T  50764855 atactatgaggattgaacttttgatgtcaccgtacaaacagtggggtgttactcacaacacttttg 50764790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 23761185 - 23761121
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||| ||| ||||| || |||||||    
T  23761185 ctgaacttttgatgtcactatacaaacagtgaggtgttactcacaacacttttgatgttatagtg 23761121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 29584298 - 29584409
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    |||||||||||||| || ||||||||||||| |||||| ||||  ||| ||||| || |||||   ||||||||| | |||||||||||||   | ||||    
T  29584298 ctgaacttttgatgccattgtacaaacagtgaggtgttactca--acacttttgatgttatag---tgttaacttcaccagaaaagtcattcccacgact 29584392  T
Q  125 tcaccgtagaattttcc 141  Q
    ||||| |||||||||||    
T  29584393 tcaccatagaattttcc 29584409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 33341512 - 33341397
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcacta----caattttgttgatatagtgctgttaacttaatcagaaaagtcattttgat 120  Q
    |||||||||||||| ||||||||||||||||||||||| ||| | |    |||||||| ||||||||   |||||| || | ||||||| ||||| | ||    
T  33341512 ctgaacttttgatgccactgtacaaacagtggggtgttcctcgcaacaatcaattttgatgatatag---tgttaatttcaccagaaaaatcattctcat 33341416  T
Q  121 gacttcaccgtagaatttt 139  Q
    ||||||||  |||||||||    
T  33341415 gacttcactatagaatttt 33341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 32592206 - 32592106
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgact 124  Q
    ||||||||||||||||||| |||||||||||| ||||| ||| | ||| ||   ||||||  ||  ||||||||| |||| |||||||||| | ||||||    
T  32592206 ctgaacttttgatgtcactatacaaacagtggagtgttactctcaacactt---ttgatactgtagtgttaacttcatcaaaaaagtcattataatgact 32592110  T
Q  125 tcac 128  Q
    ||||    
T  32592109 tcac 32592106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 54499336 - 54499424
Alignment:
Q  25 ctgaacttttgatgtcact-gtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcatt 115  Q
    ||||||||||||||||| | |||||||| |||||||||| ||||| ||| ||||| || |||||   ||||||||| | |||||||||||||    
T  54499336 ctgaacttttgatgtcattagtacaaacggtggggtgttactcacaacacttttgatgctatag---tgttaacttcaccagaaaagtcatt 54499424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 55477977 - 55478106
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgt----acaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaa 108  Q
    ||||||||||  ||||||||||||||||| |||    ||||||||||| ||||| |||  |||| ||||| || |||||   ||||||||| | || |||    
T  55477977 atactatgaggactgaacttttgatgtcattgtacaaacaaacagtggagtgttactcgttacatttttgatgttatag---tgttaacttcaccaaaaa 55478073  T
Q  109 agtcattttgatgacttcaccgtagaattttcc 141  Q
    | ||||| | ||||||||||| |||||||||||    
T  55478074 aatcattctcatgacttcaccatagaattttcc 55478106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 9139357 - 9139313
Alignment:
Q  26 tgaacttttgatgtcactgtacaaacagtggggtgttgctcacta 70  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||    
T  9139357 tgaactttttatgtcactgtacaaacggtggggtgttactcacta 9139313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 51204628 - 51204580
Alignment:
Q  92 gttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttc 140  Q
    |||||||| | ||||||||||||||| ||||||||||| ||||||||||    
T  51204628 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 51204580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 35952627 - 35952670
Alignment:
Q  252 acatataattatattgaactatatgattttttcaaattattagc 295  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||    
T  35952627 acatataattacattgaattatatgattttatcaaattattagc 35952670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 3712517 - 3712563
Alignment:
Q  250 acacatataattatattgaactatatgattttttcaaattattagcg 296  Q
    ||||||||||||| |||||| || |||||||| ||||||||||||||    
T  3712517 acacatataattacattgaattacatgattttctcaaattattagcg 3712563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 879649 - 879710
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtg 89  Q
    |||||||||||||| |||||||||| || |||||| |||| |||| ||||| || |||||||    
T  879649 aacttttgatgtcattgtacaaacaatgaggtgttactcattacatttttgatgttatagtg 879710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 20521871 - 20521928
Alignment:
Q  264 attgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||||| ||| ||||||| ||||||||||| || || || ||||||||||||||||||    
T  20521871 attgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtc 20521928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 2704560 - 2704512
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| | ||||||||||||||| ||||||||||| || ||||||||    
T  2704560 ttaacttcaccagaaaagtcattttcatgacttcaccataaaattttcc 2704512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 19440746 - 19440861
Alignment:
Q  25 ctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcattttgatgac- 123  Q
    |||||||||||||| || ||||||||| |||| |||||  ||| |||| ||||| || |||||   ||||||| | | || |||||||||| | |||||     
T  19440746 ctgaacttttgatgccattgtacaaacggtggagtgttaatcattacatttttgatgttatag---tgttaacatcaccaaaaaagtcattctcatgact 19440842  T
Q  124 ttcaccgtagaattttcca 142  Q
    |||||| ||||||||||||    
T  19440843 ttcaccatagaattttcca 19440861  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 20633508 - 20633468
Alignment:
Q  278 ttttttcaaattattagcgataacgacgtgtcagtgtccgt 318  Q
    ||||||||||||||||||| |  ||||||||||||||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgt 20633468  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 23293001 - 23293065
Alignment:
Q  257 taattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    |||||||| |||| ||| |||||||||||||||||||||  |  || ||||||| ||||||||||    
T  23293001 taattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtc 23293065  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 38812260 - 38812308
Alignment:
Q  93 ttaacttaatcagaaaagtcattttgatgacttcaccgtagaattttcc 141  Q
    ||||||| | ||||||||||||| | ||||||||||| |||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 38812308  T

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Target: scaffold0002 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 94458 - 94544
Alignment:
Q  28 aacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtcatttt 117  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||| || ||||    ||||||||| |||||||||||||||||    
T  94458 aacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttata---atgttaacttcatcagaaaagtcatttt 94544  T

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Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 259 - 129
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    ||||||||||  |||||||||||||| || |||||||||||||| ||||| ||||| ||| ||||  |  || ||   ||||||||| | ||||||||||    
T  259 atactatgaggactgaacttttgatgccattgtacaaacagtggagtgttactcacaacattttttatactacag---tgttaacttcaccagaaaagtc 163  T
Q  113 attttgatgacttcaccgtagaattttccaaaaa 146  Q
    |||||  |||||||||| ||||||||||| ||||    
T  162 attttcgtgacttcaccatagaattttcctaaaa 129  T

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Target: scaffold0022 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 146076 - 146206
Alignment:
Q  13 atactatgagagctgaacttttgatgtcactgtacaaacagtggggtgttgctcactacaattttgttgatatagtgctgttaacttaatcagaaaagtc 112  Q
    |||||||||  |||||||||||||||||| | |||||| | ||||||||| |||| |||| ||||  || ||||    ||||||||||| || |||| ||    
T  146076 atactatgaaggctgaacttttgatgtcattctacaaataatggggtgttactcattacattttttatgttata---atgttaacttaaccaaaaaaatc 146172  T
Q  113 attttgatgacttcaccgtagaattttccaaaaa 146  Q
    ||| | ||||||||||||||||||||| ||||||    
T  146173 attcttatgacttcaccgtagaatttttcaaaaa 146206  T

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Target: scaffold0103 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 51865 - 51789
Alignment:
Q  247 acaacacatataattatattgaactatatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtccg 323  Q
    ||||||| | |||||| | |||| ||| |||||||||||||||||||||  |  || ||||||||||||||||||||    
T  51865 acaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccg 51789  T

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Target: scaffold0053 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 8827 - 8778
Alignment:
Q  272 atatgattttttcaaattattagcgataacgacgtgtcagtgtccgtgtc 321  Q
    ||||||||||||||||||||||||  |  || ||||||||||||||||||    
T  8827 atatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 8778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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