View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16735_low_42 (Length: 405)

Name: NF16735_low_42
Description: NF16735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16735_low_42
NF16735_low_42
[»] chr4 (20 HSPs)
chr4 (11-389)||(4123692-4124070)
chr4 (29-389)||(4344596-4344956)
chr4 (42-389)||(4361027-4361374)
chr4 (26-389)||(4320390-4320750)
chr4 (73-389)||(4335295-4335611)
chr4 (199-389)||(4133366-4133554)
chr4 (133-387)||(6498401-6498655)
chr4 (134-363)||(7885267-7885496)
chr4 (133-369)||(6675673-6675909)
chr4 (167-389)||(6621416-6621638)
chr4 (133-382)||(6545323-6545572)
chr4 (133-369)||(6651037-6651273)
chr4 (149-369)||(6752930-6753150)
chr4 (133-389)||(6728356-6728612)
chr4 (134-387)||(6758676-6758929)
chr4 (133-315)||(6588071-6588253)
chr4 (149-389)||(6796737-6796977)
chr4 (137-351)||(6532111-6532325)
chr4 (134-192)||(4133290-4133348)
chr4 (160-228)||(6822802-6822870)
[»] chr6 (27 HSPs)
chr6 (138-389)||(5690039-5690290)
chr6 (129-389)||(5354485-5354745)
chr6 (138-389)||(5344811-5345062)
chr6 (124-389)||(5128283-5128548)
chr6 (51-382)||(5096665-5096996)
chr6 (127-389)||(5066563-5066825)
chr6 (124-389)||(5102480-5102745)
chr6 (127-389)||(5425860-5426122)
chr6 (133-389)||(5447537-5447793)
chr6 (130-381)||(5073780-5074031)
chr6 (138-381)||(5176697-5176940)
chr6 (138-381)||(5278524-5278767)
chr6 (127-389)||(5181796-5182058)
chr6 (127-389)||(5157497-5157759)
chr6 (127-389)||(5383276-5383538)
chr6 (131-389)||(5433985-5434243)
chr6 (127-378)||(5396911-5397162)
chr6 (50-389)||(5350344-5350677)
chr6 (124-389)||(5370521-5370786)
chr6 (127-382)||(5284258-5284513)
chr6 (149-359)||(5281280-5281490)
chr6 (248-389)||(5257324-5257465)
chr6 (265-382)||(5447114-5447231)
chr6 (149-359)||(5179521-5179731)
chr6 (138-259)||(5243793-5243914)
chr6 (301-389)||(5243910-5243998)
chr6 (124-157)||(5137532-5137565)
[»] scaffold0294 (1 HSPs)
scaffold0294 (127-389)||(8769-9031)
[»] chr5 (6 HSPs)
chr5 (133-373)||(8877575-8877815)
chr5 (140-231)||(20838740-20838831)
chr5 (140-362)||(20812254-20812476)
chr5 (140-228)||(12599054-12599142)
chr5 (149-231)||(15803019-15803101)
chr5 (138-267)||(30417892-30418021)
[»] chr7 (3 HSPs)
chr7 (136-381)||(36213707-36213952)
chr7 (136-356)||(18935369-18935589)
chr7 (136-389)||(34724464-34724717)
[»] chr2 (1 HSPs)
chr2 (138-389)||(22584094-22584345)
[»] chr3 (6 HSPs)
chr3 (130-369)||(47986744-47986963)
chr3 (130-369)||(47996031-47996250)
chr3 (130-369)||(48005318-48005537)
chr3 (130-369)||(48014603-48014822)
chr3 (138-372)||(32411083-32411314)
chr3 (138-249)||(6905806-6905917)
[»] chr8 (10 HSPs)
chr8 (140-372)||(3262629-3262860)
chr8 (139-371)||(3286516-3286748)
chr8 (138-246)||(3391536-3391644)
chr8 (138-246)||(3364262-3364370)
chr8 (138-210)||(3407323-3407395)
chr8 (141-372)||(3325003-3325234)
chr8 (140-231)||(31175955-31176046)
chr8 (141-231)||(3314966-3315056)
chr8 (140-372)||(3398522-3398754)
chr8 (138-228)||(3267198-3267288)
[»] scaffold0286 (1 HSPs)
scaffold0286 (167-369)||(6629-6831)
[»] scaffold0813 (1 HSPs)
scaffold0813 (133-369)||(4701-4937)
[»] scaffold0468 (1 HSPs)
scaffold0468 (138-249)||(6146-6257)


Alignment Details
Target: chr4 (Bit Score: 319; Significance: 1e-180; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 11 - 389
Target Start/End: Original strand, 4123692 - 4124070
Alignment:
Q  11 caaaggcactgaatttttggaaggacactgaaaatagacgatagatcatgggaaatactatttgatgcatgcaaagaaacaagggatgacattccgacag 110  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4123692 caaaggcactgaagttttggaaggacactgaaaatagacgatagatcatgggaaatactatttgatgcatgcaaagaaacaagggatgacattccgacag 4123791  T
Q  111 ctgtttgaacagcgggtgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagaga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4123792 ctgtttgaacagcgggtgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgagagaatccttcatatccacacagaga 4123891  T
Q  211 aataaatccaatgctttttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaag 310  Q
    |||||||||||||||||||||||| | ||  ||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||     
T  4123892 aataaatccaatgctttttgaccttactaccgaaaagggcacttttgttatagcagtattatttgcaatcagagtggttaaagattccatttgttccaac 4123991  T
Q  311 tcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    |||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  4123992 tcctcttccaacttgtcaatcattaaacatcccgatagaatgagagttttcagagatttcaacgaataaatgtttcttg 4124070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 29 - 389
Target Start/End: Complemental strand, 4344956 - 4344596
Alignment:
Q  29 ggaaggacactgaaaatagacgatagatcatgggaaatactatttgatgcatgcaaagaaacaagggatgacattccgacagctgtttgaacagcgggtg 128  Q
    |||| |||| || ||||||| |||| |||||||||||||||||||| |||||  ||||||||||| |||||||| ||  ||| |||||||| || ||| |    
T  4344956 ggaaagacattggaaatagatgatatatcatgggaaatactatttgttgcatttaaagaaacaagcgatgacatcccagcagttgtttgaaaagtgggcg 4344857  T
Q  129 ggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttt 228  Q
     ||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  4344856 agagaccatttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttt 4344757  T
Q  229 tgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtca 328  Q
    |||||| | ||  |||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4344756 tgaccttactactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagattccatttgttccaagtcctcttccaacttgtca 4344657  T
Q  329 atctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4344656 atcattaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 4344596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 42 - 389
Target Start/End: Complemental strand, 4361374 - 4361027
Alignment:
Q  42 aaatagacgatagatcatgggaaatactatttgatgcatgcaaagaaacaagggatgacattccgacagctgtttgaacagcgggtgggagattatttgt 141  Q
    ||||||| |||| |||||||||||||||||||| |||||  ||| |||||||||||||||| ||  ||| |||||||| || ||| | ||||  ||||||    
T  4361374 aaatagatgatatatcatgggaaatactatttgttgcatttaaaaaaacaagggatgacatcccagcagttgtttgaaaagtgggcgagagaccatttgt 4361275  T
Q  142 tggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtatg 241  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| || |  ||     
T  4361274 tggtgacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgttttgatcttacaatt 4361175  T
Q  242 gaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatc 341  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || ||||||    
T  4361174 gaaaagggtacttttgttataccagtgttatttgcaatcagagtggttaaagattccatttgttccaagtcctcttccaacgtgtcaatcattgaacatc 4361075  T
Q  342 cagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4361074 cagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 4361027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 26 - 389
Target Start/End: Original strand, 4320390 - 4320750
Alignment:
Q  26 tttggaaggacactgaaaatagacgatagatcatgggaaatactatttgatgcatgcaaagaaacaagggatgacat-tccgacagctgtttgaacagcg 124  Q
    |||||||||||| || ||||||| |||||||| ||| |||||| | ||||||| |  ||||| |||||||||||||| |  || ||||||||||| ||||    
T  4320390 tttggaaggacaatggaaatagatgatagatcgtggaaaatacaagttgatgcctctaaagacacaagggatgacatgtgaga-agctgtttgaaaagcg 4320488  T
Q  125 ggtgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgc 224  Q
    ||||  |||||||||| ||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4320489 ggtgacagattatttggtg---acatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgc 4320585  T
Q  225 tttttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaactt 324  Q
    |||||||||| | ||  |||||||| ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  4320586 tttttgaccttactaatgaaaagggaacttttgttataccagtattatttgcaatcagggtggttaaagattccatttgttccaagtcctcttccaactt 4320685  T
Q  325 gtcaatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||||| |||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||    
T  4320686 gtcaatcattaaacatcccgatagaatgagagtattcagagttttcaacgtatagatgtttcttg 4320750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 73 - 389
Target Start/End: Complemental strand, 4335611 - 4335295
Alignment:
Q  73 tgatgcatgcaaagaaacaagggatgacattccgacagctgtttgaacagcgggtgggagattatttgttggtaacatccaagacgaaatgatagaagga 172  Q
    |||| ||| |||||||||| ||| ||||||||| ||||||||||||||||| |||| || |||||||||||||| |||||||||| |||| |||||||||    
T  4335611 tgatacattcaaagaaacatggggtgacattccaacagctgtttgaacagctggtgagacattatttgttggtaccatccaagaccaaattatagaagga 4335512  T
Q  173 aacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtatggaaaagggcacttttgttataccagtgtcat 272  Q
    ||||||||||| |||||||||||||| ||||||| ||| ||| | ||||||||||||||| | | ||  |||||||||||||||||||||||||||| ||    
T  4335511 aacacatcacgggagaatccttcatacccacacaaagagatatagccaatgctttttgactttactactgaaaagggcacttttgttataccagtgttat 4335412  T
Q  273 ttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttcaa 372  Q
     ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  4335411 ctgccatgagagtggttaaagattccatttgttccaagtcctcttccaacttgtcaatctttaaacatcctgatagaatgagagttttcagagacttcaa 4335312  T
Q  373 cgtatagatgtttcttg 389  Q
    |||||||||||||||||    
T  4335311 cgtatagatgtttcttg 4335295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 389
Target Start/End: Original strand, 4133366 - 4133554
Alignment:
Q  199 tccacacagagaaataaatccaatgctttttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattcc 298  Q
    |||||| ||||||||| || ||||||||||||||||    |  ||||||||||||||||||||  |||||| ||   ||||||||||||||||||| |||    
T  4133366 tccacaaagagaaatatattcaatgctttttgaccttgcgactgaaaagggcacttttgttattgcagtgttatccacaatcagagtggttaaagactcc 4133465  T
Q  299 atttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||||||||||||  |||| || ||||||||  ||||||| ||||| ||||| |||||||||||||||||||||| ||||||| ||||||    
T  4133466 atttgttccaagtc--cttccaatttgtcaataattaaacagccagaaagaataagagttttcagagatttcaacgaatagatggttcttg 4133554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 133 - 387
Target Start/End: Original strand, 6498401 - 6498655
Alignment:
Q  133 attatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgac 232  Q
    |||||||| |||| |||||||||||  ||||| ||||||||| ||||||||||| ||||||| | ||||||  | ||||||  ||||||||||||||||     
T  6498401 attatttgatggtgacatccaagaccgaatgagagaaggaaatacatcacgtgaaaatcctttaaatccacctaaagaaatgtatccaatgctttttgat 6498500  T
Q  233 ctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatct 332  Q
    || | ||| |||||||| |||||||||||| |||| | ||  |||||||  || || || |||||||| ||||||| |||||| || || ||||||||||    
T  6498501 cttactattgaaaagggaacttttgttatagcagtcttatccgcaatcaaggttgtcaatgattccatctgttccacgtcctcctccaatttgtcaatct 6498600  T
Q  333 ttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttct 387  Q
    |  |||||||||| ||||| | |||||  |||||||| ||  |||||||| ||||    
T  6498601 tggaacatccagaaagaatcaaagtttctagagattttaatttatagatgcttct 6498655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 134 - 363
Target Start/End: Original strand, 7885267 - 7885496
Alignment:
Q  134 ttatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacc 233  Q
    |||||||||||  ||| |||||||  ||| ||||||||||||||   |||||   |||||| ||| ||||| |||||||||||| ||||||||||||| |    
T  7885267 ttatttgttggagacagccaagactgaataatagaaggaaacactctacgtgcagatcctttataaccacatagagaaataaatgcaatgctttttgatc 7885366  T
Q  234 tcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctt 333  Q
    | | ||  | |||||||||| |||| ||| |||||||||  |||| ||  ||||||||||||| ||||||||| |  |||||||||||||||||||| ||    
T  7885367 ttactactgcaaagggcactcttgtgatagcagtgtcatccgcaaccaaggtggttaaagatttcatttgttctatatcctcttctaacttgtcaatttt 7885466  T
Q  334 taaacatccagatagaatgagagttttcag 363  Q
    |  ||||||||| |||||||| ||||||||    
T  7885467 tgtacatccagacagaatgagtgttttcag 7885496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 369
Target Start/End: Complemental strand, 6675909 - 6675673
Alignment:
Q  133 attatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgac 232  Q
    |||||||| |||| |||||||||||  ||||| ||||||||| |||||| |||| ||||||||| | ||||| | ||| || ||||||||||| |||||     
T  6675909 attatttgatggtgacatccaagacttaatgagagaaggaaatacatcaagtgaaaatccttcaaagccacataaagagatgaatccaatgctctttgat 6675810  T
Q  233 ctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatct 332  Q
    || | ||| |||||||| |||||| ||||| | || | || ||||||||  || || |  |||||||| ||||||| |||||| || || ||||||||||    
T  6675809 cttactattgaaaagggaacttttattatagctgttttatctgcaatcaaggttgtcattgattccatctgttccacgtcctcctccaatttgtcaatct 6675710  T
Q  333 ttaaacatccagatagaatgagagttttcagagattt 369  Q
    |  |||||||||| ||||| | |||||  ||||||||    
T  6675709 tggaacatccagaaagaatcaaagtttctagagattt 6675673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 389
Target Start/End: Original strand, 6621416 - 6621638
Alignment:
Q  167 gaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtatggaaaagggcacttttgttataccag 266  Q
    |||||||||||||| ||||| ||||||||| ||||||| | ||||||| |||||||| |||| || |  | ||| |||||||| |||||||||||| |||    
T  6621416 gaaggaaacacatcccgtgaaaatccttcaaatccacataaagaaatatatccaatgtttttagatcgtactattgaaaagggaacttttgttatagcag 6621515  T
Q  267 tgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagaga 366  Q
    | | ||  |||||||  || || || |||||||| |||||||||||||| || || ||||||||| |  ||||||| || ||||| | |||||  |||||    
T  6621516 tcttatccgcaatcaaggttgtcaatgattccatctgttccaagtcctcctccaatttgtcaatcatggaacatcctgaaagaattaaagtttctagaga 6621615  T
Q  367 tttcaacgtatagatgtttcttg 389  Q
    ||| ||  |||||||| ||||||    
T  6621616 ttttaatttatagatgcttcttg 6621638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 382
Target Start/End: Original strand, 6545323 - 6545572
Alignment:
Q  133 attatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgac 232  Q
    |||||||| |||| ||| |||||||  ||||| |||||| || ||||||||||| ||||||||| | ||||  | ||||||| |||||||||||||  |     
T  6545323 attatttgatggtgacagccaagaccgaatgagagaagggaatacatcacgtgaaaatccttcaaagccacgaaaagaaatatatccaatgcttttcaat 6545422  T
Q  233 ctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatct 332  Q
    || | ||| ||||||||||||||||||||| |||| | ||  |||||||  ||  | || |||||||| |||||||||||||| || || |||| |||||    
T  6545423 ctaactattgaaaagggcacttttgttatagcagtcttatccgcaatcaaggttttcaacgattccatctgttccaagtcctcctccaatttgttaatct 6545522  T
Q  333 ttaaacatccagatagaatgagagttttcagagatttcaacgtatagatg 382  Q
    |  ||||||| || ||||| | |||||  |||||||| ||  ||||||||    
T  6545523 tggaacatcccgaaagaatcaaagtttctagagattttaatttatagatg 6545572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 369
Target Start/End: Complemental strand, 6651273 - 6651037
Alignment:
Q  133 attatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgac 232  Q
    |||| ||| |||| |||||||||||  || || | ||||||| ||||| ||||| ||||||||| | ||||| ||||||||| |||||||| || || |     
T  6651273 attagttgatggtgacatccaagaccgaacgagaaaaggaaatacatctcgtgaaaatccttcaaagccacatagagaaatatatccaatgtttcttaat 6651174  T
Q  233 ctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatct 332  Q
    || | ||| ||||| ||||||||||||||| |||| | ||  |||||||  ||  | || |||||||| |||||||||||||| || || ||||||||||    
T  6651173 cttactattgaaaacggcacttttgttatagcagtcttatccgcaatcaaggttttcaatgattccatctgttccaagtcctcctccaatttgtcaatct 6651074  T
Q  333 ttaaacatccagatagaatgagagttttcagagattt 369  Q
    |  |||||||||| ||||| | |||||  ||||||||    
T  6651073 tggaacatccagaaagaatcaaagtttctagagattt 6651037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 149 - 369
Target Start/End: Complemental strand, 6753150 - 6752930
Alignment:
Q  149 atccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtatggaaaagg 248  Q
    |||||||||  ||||| |||||| || ||||||||||| ||||||||| | ||||  | ||||||| |||||||||||||  | || | ||| |||||||    
T  6753150 atccaagaccgaatgagagaagggaatacatcacgtgaaaatccttcaaagccacgaaaagaaatatatccaatgcttttcaatcttactattgaaaagg 6753051  T
Q  249 gcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatag 348  Q
    |||||||||||||| |||| | ||  |||||||  ||  | || |||||||| |||||||||||||| || || ||||||||| |  |||||||||| ||    
T  6753050 gcacttttgttatagcagtcttatccgcaatcaaggtaatcaatgattccatctgttccaagtcctcctccaatttgtcaatcatggaacatccagaaag 6752951  T
Q  349 aatgagagttttcagagattt 369  Q
    ||| | |||||  ||||||||    
T  6752950 aatcaaagtttctagagattt 6752930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 389
Target Start/End: Complemental strand, 6728612 - 6728356
Alignment:
Q  133 attatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgac 232  Q
    |||||||| |||  ||||||||||| |||  | |||||| || ||||||||||| ||||||||| | ||||  | ||||||| ||||||| |||||  |     
T  6728612 attatttgatggcgacatccaagaccaaacaagagaagggaatacatcacgtgaaaatccttcaaagccacgaaaagaaatatatccaatacttttcaat 6728513  T
Q  233 ctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatct 332  Q
    || | ||| ||||| ||||||||||||||| |||| | ||  |||||||  || || || |||||||| ||||||| |||||| || || |||||||||     
T  6728512 cttactattgaaaatggcacttttgttatagcagtcttatccgcaatcaaggttgtcaatgattccatctgttccacgtcctcctccaatttgtcaatca 6728413  T
Q  333 ttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    |  ||||||| || ||||| | |||||  |||||||| ||| | |||||||||||||    
T  6728412 tggaacatcctgaaagaatcaaagtttctagagattttaacttgtagatgtttcttg 6728356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 387
Target Start/End: Complemental strand, 6758929 - 6758676
Alignment:
Q  134 ttatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacc 233  Q
    |||||||||||| |||||| ||||  ||||| | ||||||| | ||||||||  ||||||||| | ||||||||||||||||||| |||||||||| | |    
T  6758929 ttatttgttggtgacatcctagaccgaatgacaaaaggaaatatatcacgtgcaaatccttcaaagccacacagagaaataaatctaatgctttttaatc 6758830  T
Q  234 tcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctt 333  Q
    | | ||| |||| ||| ||||  |||||  |||| | ||  |||||||  ||  | || |||||||| |||||||||||||| || || |||||||||||    
T  6758829 ttaatattgaaatgggtacttccgttattgcagtcttatccgcaatcaatgtaatcaatgattccatctgttccaagtcctcctccaatttgtcaatctt 6758730  T
Q  334 taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttct 387  Q
     |  ||||| || ||||| | |||||  |||||||| || || |||||| ||||    
T  6758729 gatgcatcctgagagaatcaaagtttctagagattttaatgtttagatgcttct 6758676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 315
Target Start/End: Original strand, 6588071 - 6588253
Alignment:
Q  133 attatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgac 232  Q
    |||||||| |||  |||||||||||  ||||| |||||| || ||||||||||| ||||||||| | ||||| | ||||||| |||||||||||||   |    
T  6588071 attatttgatggcgacatccaagaccgaatgagagaagggaatacatcacgtgaaaatccttcaaagccacaaaaagaaatatatccaatgcttttcatc 6588170  T
Q  233 ctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctc 315  Q
    || | ||| ||||| ||||||||||| ||  |||| | ||  |||||||  ||  | || |||||||| ||||||||||||||    
T  6588171 cttactattgaaaatggcacttttgtgatggcagtcttatcggcaatcaaggtaatcaacgattccatctgttccaagtcctc 6588253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 389
Target Start/End: Complemental strand, 6796977 - 6796737
Alignment:
Q  149 atccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtatggaaaagg 248  Q
    |||||||||  ||||| |||||| || || || ||||| ||||||||| | ||||| | ||||||| |||||||  ||||  | || | ||| ||||| |    
T  6796977 atccaagaccgaatgagagaagggaatacgtcgcgtgaaaatccttcaaagccacaaaaagaaatatatccaatatttttcaatcttactattgaaaatg 6796878  T
Q  249 gcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatag 348  Q
    |||||||||| |||  ||| | || |||||||| |||  | || |||||||| |||||||||||||| || || || |||||| |   ||||||||| ||    
T  6796877 gcacttttgtgatagaagtcttatctgcaatcaaagtaatcaatgattccatctgttccaagtcctcctccaatttttcaatcatggtacatccagaaag 6796778  T
Q  349 aatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||| | |||||  |||||||| || ||||||||| ||||||    
T  6796777 aatcaaagtttctagagattttaatgtatagatgcttcttg 6796737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 351
Target Start/End: Original strand, 6532111 - 6532325
Alignment:
Q  137 tttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctca 236  Q
    |||| |||| |||||||||||  ||||||||||||||| ||||||  ||| ||||||||| | || || | ||||||| || ||||| ||||||  || |    
T  6532111 tttgatggtgacatccaagaccgaatgatagaaggaaatacatcatttgaaaatccttcaaagccgcaaatagaaatatattcaatgttttttggtctta 6532210  T
Q  237 gtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaa 336  Q
     ||| |||||||| |||| || |||| |||| | ||  |||||||  || || || |||||||| ||||| | |||||| || || |||| ||||||  |    
T  6532211 ctattgaaaaggggacttctgctatagcagtcttatccgcaatcaaggttgtcaacgattccatctgttctatgtcctcctccaatttgttaatcttgga 6532310  T
Q  337 acatccagatagaat 351  Q
    |||||| || |||||    
T  6532311 acatcctgaaagaat 6532325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 4133290 - 4133348
Alignment:
Q  134 ttatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatcc 192  Q
    |||||||||||| ||||||||| |  ||||||||||||||| || ||||||||| ||||    
T  4133290 ttatttgttggtgacatccaagtctgaatgatagaaggaaatacttcacgtgagtatcc 4133348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 6822870 - 6822802
Alignment:
Q  160 aatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttt 228  Q
    ||||| |||||| || ||||||||||| ||||||||| | || || | ||||||| |||||||||||||    
T  6822870 aatgagagaagggaatacatcacgtgaaaatccttcaaagccgcataaagaaatatatccaatgctttt 6822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 5e-78; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 138 - 389
Target Start/End: Original strand, 5690039 - 5690290
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| ||||||||||| |||||||||| ||||| | |||||||||||||||||||| ||| |||||||||||| | ||||||||||||||||| |     
T  5690039 ttgttggtgacatccaagaccaaatgatagatggaaatatatcacgtgagaatccttcatgtccgcacagagaaatatacccaatgctttttgaccttac 5690138  T
Q  238 tatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaa 337  Q
     || |||||||||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| || ||    
T  5690139 aattgaaaagggcacacttgttattccagtgtcatttgcaagcagagtggttaaagattccatttgttccaagtcctcttccaacttgttaatcattgaa 5690238  T
Q  338 catccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    || || || ||||||||||||||||||||||||||| |||||||| ||||||    
T  5690239 cacccggaaagaatgagagttttcagagatttcaacttatagatgcttcttg 5690290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 129 - 389
Target Start/End: Original strand, 5354485 - 5354745
Alignment:
Q  129 ggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttt 228  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||    
T  5354485 ggagattatttgttggtgacatccaagaccaaatgatagatggaaacacatcacgtgagaatccttcatagccacataaagaaatatatccaatgctttt 5354584  T
Q  229 tgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtca 328  Q
     || || | ||| || ||||| ||| |||||||  ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| ||||||||     
T  5354585 ggaactaactattgagaagggtactcttgttattgcagtgtcatttgcaagcagggtggttaaagattccaattgttccaagtcctcttccaacttgtct 5354684  T
Q  329 atctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    | ||||  ||| ||||| |||||||||||||||| |||||||||| | |||||| ||||||    
T  5354685 aactttttacaaccagaaagaatgagagttttcaaagatttcaacttgtagatgcttcttg 5354745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 138 - 389
Target Start/End: Complemental strand, 5345062 - 5344811
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| ||||||||||| | |||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |     
T  5345062 ttgttggtgacatccaagaccagatgatagatggaaatacatcgcgtgagaatccttcatagccacacagagaaatatatccaatgctttttgaccttac 5344963  T
Q  238 tatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaa 337  Q
    ||   ||||||| |||||||||||  |||||| |||||| |||||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  5344962 tactaaaaagggaacttttgttattgcagtgttatttgcgatcagaatggttaaagatttcatttgttctaagtcctcttccaacttgtcaatctttaaa 5344863  T
Q  338 catccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    || || || |||||||||||||| ||||| |||||| |||||||| ||||||    
T  5344862 caacccgaaagaatgagagtttttagagaattcaacttatagatgcttcttg 5344811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 124 - 389
Target Start/End: Original strand, 5128283 - 5128548
Alignment:
Q  124 gggtgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatg 223  Q
    ||||||||||| |||||||||| ||||||||||| | |||||||| ||||||||||||| ||| ||||||||||  || |||||||| ||| ||||||||    
T  5128283 gggtgggagatcatttgttggtgacatccaagaccagatgatagatggaaacacatcacttgaaaatccttcatggccgcacagagagatatatccaatg 5128382  T
Q  224 ctttttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaact 323  Q
    ||||||||||| | ||  |||||||| ||| || ||||  |||||| |||||||| |||||| ||||| |||||||||||||||||||||||||| ||||    
T  5128383 ctttttgaccttactactgaaaagggtactctttttattgcagtgttatttgcaagcagagttgttaatgattccatttgttccaagtcctcttccaact 5128482  T
Q  324 tgtcaatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    |||||||| ||| ||| ||||| |||||||||||||||| |||||||||| |||||||| ||||||    
T  5128483 tgtcaatcattatacaaccagaaagaatgagagttttcaaagatttcaacttatagatgcttcttg 5128548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 51 - 382
Target Start/End: Complemental strand, 5096996 - 5096665
Alignment:
Q  51 atagatcatgggaaatactatttgatgcatgcaaagaaacaagggatgacattccgacagctgtttgaacagcgggtgggagattatttgttggtaacat 150  Q
    |||| ||||||||| ||||||||| | |||  | ||||||||||||||||||  |   || |||||||||   || || |||||||||||||||| |||     
T  5096996 atagttcatgggaactactatttggtacatctacagaaacaagggatgacatgacattagatgtttgaactagggatgagagattatttgttggtgacaa 5096897  T
Q  151 ccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtatggaaaagggc 250  Q
    ||||||| | |||||||| ||||||||||||||||| ||||||||||  ||||| ||||||||  ||||||||||||||||||| | ||  ||||||||     
T  5096896 ccaagaccagatgatagacggaaacacatcacgtgaaaatccttcatggccacatagagaaatgtatccaatgctttttgaccttactactgaaaagggt 5096797  T
Q  251 acttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaa 350  Q
    ||| || |||| ||||||| |||||||| |||| ||||||| |||||||||||||| | ||||||||| |||| ||||||| ||| ||| ||||| ||||    
T  5096796 actctttttattccagtgttatttgcaagcagaatggttaatgattccatttgttctatgtcctcttccaactcgtcaatcattatacacccagaaagaa 5096697  T
Q  351 tgagagttttcagagatttcaacgtatagatg 382  Q
    ||||||||||||||||||||||| ||||||||    
T  5096696 tgagagttttcagagatttcaacttatagatg 5096665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 127 - 389
Target Start/End: Original strand, 5066563 - 5066825
Alignment:
Q  127 tgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctt 226  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||| |||||||||||||| || |||| ||| ||  |||||||||||    
T  5066563 tgggagattatttgttggtgacatccaagacaaaatgatagatggaaacacatcacgcgagaatccttcatagccgcacaaagagatgtatccaatgctt 5066662  T
Q  227 tttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgt 326  Q
    |||||||| | ||  |||||||| | | || ||||  |||| | || ||||| ||||||||||||||||||||||||||| | |||||||||||||||||    
T  5066663 tttgaccttactactgaaaagggtattctttttattgcagttttatgtgcaagcagagtggttaaagattccatttgttctatgtcctcttctaacttgt 5066762  T
Q  327 caatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||| ||| ||| ||||| |||||||||||||| |||||||||||| |||||||| ||||||    
T  5066763 caatcattatacacccagaaagaatgagagttttaagagatttcaacttatagatgcttcttg 5066825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 124 - 389
Target Start/End: Original strand, 5102480 - 5102745
Alignment:
Q  124 gggtgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatg 223  Q
    |||||| ||||||||||||||| ||||||||||| | |||||||| |||||||||||| |||| | ||||||||| ||||| ||||| ||| ||||||||    
T  5102480 gggtggaagattatttgttggtgacatccaagaccagatgatagatggaaacacatcatgtgaaagtccttcatagccacatagagagatatatccaatg 5102579  T
Q  224 ctttttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaact 323  Q
    ||||||||||| | ||  |||||||||||| |||||||  ||||||  ||||| |  ||||||||||| |||||||||||||||||||| ||||| ||||    
T  5102580 ctttttgaccttactactgaaaagggcactgttgttattgcagtgttgtttgctagaagagtggttaatgattccatttgttccaagtcgtcttccaact 5102679  T
Q  324 tgtcaatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    |||||||| ||||||| ||||| ||||||||  |||||| |||||||||| |||||||| ||||||    
T  5102680 tgtcaatcattaaacacccagaaagaatgagtattttcaaagatttcaacttatagatgcttcttg 5102745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 127 - 389
Target Start/End: Complemental strand, 5426122 - 5425860
Alignment:
Q  127 tgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctt 226  Q
    ||||||||||||||||||| ||||||||||| ||||||| |  ||||||||||||||||| ||||||||||| || |||| ||| ||  |||||||||||    
T  5426122 tgggagattatttgttggtgacatccaagaccaaatgatcgctggaaacacatcacgtgaaaatccttcatagccgcacaaagagatgtatccaatgctt 5426023  T
Q  227 tttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgt 326  Q
    | |||| | |  |  |||||||| ||| || ||||  |||| | || ||||||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  5426022 tgtgacattaccactgaaaagggtactctttttattgcagttttatgtgcaatcagagtggttaaagattccatttgttctatgtcctcttccaacttgt 5425923  T
Q  327 caatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||| ||| ||| ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  5425922 caatcattacacacccagaaagaatgagagttttcagagatttcaacttatagatgtttcttg 5425860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 133 - 389
Target Start/End: Complemental strand, 5447793 - 5447537
Alignment:
Q  133 attatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgac 232  Q
    ||||||| ||||| |||||||||||  ||| ||||| |||||||||||| | ||| |||||||| |||| |||| ||||||| |||||||||| || |||    
T  5447793 attatttcttggtgacatccaagaccgaataatagatggaaacacatcatgcgaggatccttcaaatccgcacaaagaaatatatccaatgctcttcgac 5447694  T
Q  233 ctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatct 332  Q
    || | ||  |||||||||||| |||||||   ||| | |||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  5447693 ctaactaccgaaaagggcactgttgttattgaagtattatttgcaagcagagtggttaaagattccatctgttccaagtcctcttccagcttgtcaatct 5447594  T
Q  333 ttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||||| ||||| |||||||||||||||| |||||||||| |||||||| ||||||    
T  5447593 ttaaacaaccagaaagaatgagagttttcaaagatttcaacttatagatgcttcttg 5447537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 130 - 381
Target Start/End: Original strand, 5073780 - 5074031
Alignment:
Q  130 gagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgcttttt 229  Q
    |||||||||||| ||| ||||||||||| ||||||| || || |||||||||||||||||||||||||| || |||| ||||||| |||||||||||||     
T  5073780 gagattatttgtcggtgacatccaagaccaaatgatcgatgggaacacatcacgtgagaatccttcatagccgcacaaagaaatatatccaatgcttttc 5073879  T
Q  230 gacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaa 329  Q
    ||||| | ||  |||||||||||| |||||||  | |||| |||||| ||||||||||||||||||  ||| ||||| ||||||||||| ||||||||||    
T  5073880 gaccttactactgaaaagggcactcttgttattgcggtgttatttgctatcagagtggttaaagatgtcatctgttctaagtcctcttccaacttgtcaa 5073979  T
Q  330 tctttaaacatccagatagaatgagagttttcagagatttcaacgtatagat 381  Q
    || || |||| || || |||||||||||||| |||||||||||| |||||||    
T  5073980 tcattgaacacccggaaagaatgagagtttttagagatttcaacttatagat 5074031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 138 - 381
Target Start/End: Complemental strand, 5176940 - 5176697
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| ||||||||||| ||||||| || ||||| | ||||||||||||||||||||| || |||| ||| ||  ||||||||||||||||||| |     
T  5176940 ttgttggtgacatccaagaccaaatgattgatggaaatatatcacgtgagaatccttcatagccgcacaaagagatgtatccaatgctttttgaccttac 5176841  T
Q  238 tatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaa 337  Q
    ||| || ||||||||| |||||||  |||||| |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| |  ||    
T  5176840 tattgacaagggcactcttgttattgcagtgttatttgcaagcagagtagttaaagattccatttgttccaagtcctcttccaacttgtcaatcatcgaa 5176741  T
Q  338 catccagatagaatgagagttttcagagatttcaacgtatagat 381  Q
    || ||||| |||||||| ||||||| |||||||||| |||||||    
T  5176740 cacccagaaagaatgagtgttttcaaagatttcaacttatagat 5176697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 138 - 381
Target Start/End: Complemental strand, 5278767 - 5278524
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| ||||||||||| ||||||| || ||||| | ||||||||||||||||||||| || |||| ||| ||  ||||||||||||||||||| |     
T  5278767 ttgttggtgacatccaagaccaaatgattgatggaaatatatcacgtgagaatccttcatagccgcacaaagagatgtatccaatgctttttgaccttac 5278668  T
Q  238 tatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaa 337  Q
    ||| || ||||||||| |||||||  |||||| |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| |  ||    
T  5278667 tatagacaagggcactcttgttattgcagtgttatttgcaagcagagtagttaaagattccatttgttccaagtcctcttccaacttgtcaatcatcgaa 5278568  T
Q  338 catccagatagaatgagagttttcagagatttcaacgtatagat 381  Q
    || ||||| |||||||| ||||||| |||||||||| |||||||    
T  5278567 cacccagaaagaatgagtgttttcaaagatttcaacttatagat 5278524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 127 - 389
Target Start/End: Original strand, 5181796 - 5182058
Alignment:
Q  127 tgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctt 226  Q
    ||||||||||||||| ||| ||||||||||| ||||||| |  |||||||||||| ||||||||||||||||||||||||  |||||| || ||||||||    
T  5181796 tgggagattatttgtcggtgacatccaagaccaaatgatcgctggaaacacatcatgtgagaatccttcatatccacacaaggaaatatatgcaatgctt 5181895  T
Q  227 tttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgt 326  Q
    || ||| | | ||  ||||| |||||| |||||||  |||||| |||||||||||  ||||||||||||| |||||||||||| |||||||| |||||||    
T  5181896 ttggactttactactgaaaacggcactcttgttattgcagtgttatttgcaatcaatgtggttaaagatttcatttgttccaaatcctcttccaacttgt 5181995  T
Q  327 caatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||| ||||||| ||||| ||||||||||| || |  ||||||||  |||||||| ||||||    
T  5181996 caatcattaaacacccagaaagaatgagagtgtttaatgatttcaaattatagatgcttcttg 5182058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 127 - 389
Target Start/End: Original strand, 5157497 - 5157759
Alignment:
Q  127 tgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctt 226  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||| || | || ||| ||  |||||||||||    
T  5157497 tgggagattatttgttggtgacatccaagaccaaatgatagatggaaacacatcacgagaaaatccttcatagccgcccaaagagatgtatccaatgctt 5157596  T
Q  227 tttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgt 326  Q
    |||||||| | ||  |||||||| ||| || ||||  ||||||| | ||||| ||||||||||||||||||||| ||||| | ||||||||| |||||||    
T  5157597 tttgaccttactactgaaaagggtactctttttattgcagtgtcgtgtgcaagcagagtggttaaagattccatctgttctatgtcctcttccaacttgt 5157696  T
Q  327 caatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||| ||| ||| || || ||||| | | ||||||||||||||||| |||||||| ||||||    
T  5157697 caatcattatacaccctgaaagaattaaaattttcagagatttcaacttatagatgcttcttg 5157759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 127 - 389
Target Start/End: Complemental strand, 5383538 - 5383276
Alignment:
Q  127 tgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctt 226  Q
    |||||||||||||||||   |||||||||||  |||||| || ||||||||||||||||||||||||||||  || |||| ||||||| || |||| |||    
T  5383538 tgggagattatttgttgaggacatccaagacttaatgatggatggaaacacatcacgtgagaatccttcatggccgcacaaagaaatatatacaatactt 5383439  T
Q  227 tttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgt 326  Q
    |||||||| |  || |||| ||| ||| |||||||  |||||| || ||||| || ||| |||||||||||||||||||| | ||||||||| ||||||     
T  5383438 tttgaccttaaaattgaaaggggaactcttgttattgcagtgttatctgcaagcaaagtagttaaagattccatttgttctatgtcctcttccaacttgg 5383339  T
Q  327 caatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
     |||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||| ||||||    
T  5383338 taatctttaaacaaccagaaagaatgagagttttcagagatttcaacttataaatgcttcttg 5383276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 131 - 389
Target Start/End: Complemental strand, 5434243 - 5433985
Alignment:
Q  131 agattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttg 230  Q
    ||||||||||||||| |||||||||||  ||||||| | ||||| | |||  |||||||||||||||| || |||| ||| ||| |||||||||||||||    
T  5434243 agattatttgttggtgacatccaagactgaatgataaatggaaataaatcgtgtgagaatccttcataaccgcacaaagagatatatccaatgctttttg 5434144  T
Q  231 acctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaat 330  Q
    | |||||||  ||||  |||||| || ||||  |||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || ||||||||    
T  5434143 atctcagtactgaaagaggcactctttttattgcagtgttatttgcaagcagagtggttaaagattccatatgttccaagtcatcttccaaattgtcaat 5434044  T
Q  331 ctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||||||| ||||  || ||||||||||||| |||||||||| |||| ||| ||||||    
T  5434043 ctttaaacagccagtaaggatgagagttttcaaagatttcaacttatatatgcttcttg 5433985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 127 - 378
Target Start/End: Complemental strand, 5397162 - 5396911
Alignment:
Q  127 tgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctt 226  Q
    |||||| ||| |||||||| |||||||||||||||||||||  |||||||| |||| ||| |||||||||||||| |||| ||| |||||||||||||||    
T  5397162 tgggaggttaattgttggtgacatccaagacgaaatgatagctggaaacacttcacatgaaaatccttcatatccgcacaaagagataaatccaatgctt 5397063  T
Q  227 tttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgt 326  Q
    ||| |||| |  || ||||| |||||| || ||||  |||||| |||||||| ||  ||||||||||||||||| |||||||| || ||||| || ||||    
T  5397062 tttaaccttaaaattgaaaacggcactctttttattgcagtgttatttgcaaccaaggtggttaaagattccatctgttccaaatcttcttccaatttgt 5396963  T
Q  327 caatctttaaacatccagatagaatgagagttttcagagatttcaacgtata 378  Q
    |||||  |||||| ||||| ||||  |||||||  || ||||||||| ||||    
T  5396962 caatcagtaaacacccagaaagaagaagagtttgtagtgatttcaacttata 5396911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 50 - 389
Target Start/End: Complemental strand, 5350677 - 5350344
Alignment:
Q  50 gatagatcatgggaaatactatttgatgcatgcaaagaaacaagggatgacattccgacagctgtttgaacagcgggtgggagattatttgttggtaaca 149  Q
    ||||| || |||||| |||||| || | |||  |||| |||||| ||||||||   | ||| ||||||||  | || |||| |||||||||||||| |||    
T  5350677 gatagttcctgggaactactatgtggtacatctaaaggaacaagagatgacatgatgtcagatgtttgaaatggggatgggtgattatttgttggtgaca 5350578  T
Q  150 tccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtatggaaaaggg 249  Q
    |||||||   |||||||      |||||||||||||| ||||||||||| || |||| ||| ||  ||||||||||||||||||| | ||  ||||||||    
T  5350577 tccaagaatgaatgata------aacacatcacgtgaaaatccttcatagccgcacaaagagatgtatccaatgctttttgaccttactactgaaaaggg 5350484  T
Q  250 cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga 349  Q
     | | || ||||  |||| | || ||||| ||||||||||||||||||||||||||| | ||||||||| |||||||||||| ||| ||| || || |||    
T  5350483 tattctttttattgcagttttatgtgcaagcagagtggttaaagattccatttgttctatgtcctcttccaacttgtcaatcattatacaccctgaaaga 5350384  T
Q  350 atgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||||||||| |||||||||||| || ||||| ||||||    
T  5350383 atgagagttttgagagatttcaacttaaagatgcttcttg 5350344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 124 - 389
Target Start/End: Complemental strand, 5370786 - 5370521
Alignment:
Q  124 gggtgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatg 223  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||| ||||| |||||| |||| |||||| |||  |||||||  |||||  ||||||||    
T  5370786 gggtgggagataatttgttggtgacatccaagaccaaatgatagatggaaaaacatcatgtgaaaatcctacatggccacacaatgaaatgtatccaatg 5370687  T
Q  224 ctttttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaact 323  Q
    ||||||||||  | ||  |||||||| ||  || ||||  |||||| |||||||| |||||||||||| |||||||| ||||| |  |||||||| ||||    
T  5370686 ctttttgaccgtactactgaaaagggtaccctttttattgcagtgttatttgcaagcagagtggttaatgattccatctgttctatatcctcttccaact 5370587  T
Q  324 tgtcaatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    | |||||| ||| ||| || || ||||| ||||| || |||||||||||| |||| ||| ||||||    
T  5370586 tctcaatcattacacaccctgaaagaataagagtctttagagatttcaacttataaatgcttcttg 5370521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 127 - 382
Target Start/End: Original strand, 5284258 - 5284513
Alignment:
Q  127 tgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctt 226  Q
    ||||||||||||||||| | ||||||| ||| |||| ||  | ||||||||||| | ||| | ||| ||||| || |||| || |||| |||||||||||    
T  5284258 tgggagattatttgttgctgacatccatgacaaaattattaatggaaacacatcgcttgaaagtccctcataaccgcacaaagcaatatatccaatgctt 5284357  T
Q  227 tttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgt 326  Q
    || ||||| | ||  |||||||||||| |||||||  | |||| ||| || ||||||||||||||||||  ||| ||||| ||||||||||| |||||||    
T  5284358 ttcgaccttactactgaaaagggcactcttgttattgcggtgttattagctatcagagtggttaaagatgtcatctgttctaagtcctcttccaacttgt 5284457  T
Q  327 caatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatg 382  Q
    ||||| || |||| ||| | ||||||| |||||| |||||||||||| ||||||||    
T  5284458 caatcattgaacacccaaaaagaatgaaagtttttagagatttcaacttatagatg 5284513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 149 - 359
Target Start/End: Complemental strand, 5281490 - 5281280
Alignment:
Q  149 atccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtatggaaaagg 248  Q
    |||||||||  ||||||| | ||||  ||||||||||||||||||| ||| || || | ||||||| |||||||| ||||  ||||   ||  | |||||    
T  5281490 atccaagaccgaatgatatatggaactacatcacgtgagaatcctttatagccgcagaaagaaatatatccaatgtttttcaaccttcctactgcaaagg 5281391  T
Q  249 gcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatag 348  Q
    | ||| |||||||  |||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||    
T  5281390 gaactcttgttattgcagtgtcattagcaatcagggtcgttaaggattccatttgttccaagtcctcttctaacttgttaatcattgaacacccagaaag 5281291  T
Q  349 aatgagagttt 359  Q
    ||| |||||||    
T  5281290 aatcagagttt 5281280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 389
Target Start/End: Original strand, 5257324 - 5257465
Alignment:
Q  248 ggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagata 347  Q
    |||||| |||||||  |||||| ||||||||| |||||||||||||||  ||| ||||| ||||||||||| |||||||||||| || |||| ||||| |    
T  5257324 ggcactcttgttattgcagtgttatttgcaattagagtggttaaagatgtcatctgttctaagtcctcttccaacttgtcaatcattgaacacccagaaa 5257423  T
Q  348 gaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    |||||| |||||| |||||||||||| |||||||| ||||||    
T  5257424 gaatgaaagtttttagagatttcaacttatagatgcttcttg 5257465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 265 - 382
Target Start/End: Complemental strand, 5447231 - 5447114
Alignment:
Q  265 agtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcaga 364  Q
    ||||| ||||||||  ||||||||||||||||||||||  || ||||||||||| | |||||||||||||||||| ||||| |||| ||||||||||| |    
T  5447231 agtgttatttgcaagaagagtggttaaagattccattttctcgaagtcctcttccaccttgtcaatctttaaacaaccagaaagaacgagagttttcaaa 5447132  T
Q  365 gatttcaacgtatagatg 382  Q
    ||||||||| ||||||||    
T  5447131 gatttcaacttatagatg 5447114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 149 - 359
Target Start/End: Complemental strand, 5179731 - 5179521
Alignment:
Q  149 atccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtatggaaaagg 248  Q
    |||||||||  ||||||| | ||||  ||||||||||||||||||| ||| || || | ||||||| |||||||| ||||  ||||   ||  | |||||    
T  5179731 atccaagaccgaatgatatatggaactacatcacgtgagaatcctttatagccgcagaaagaaatatatccaatgtttttcaaccttcctactgcaaagg 5179632  T
Q  249 gcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatag 348  Q
    | ||| | |||||  |||||||||| |||||||| || ||||| |||||||||| ||||||||||||||| ||||||| ||||||| |||| ||||| ||    
T  5179631 gaactctagttattgcagtgtcattagcaatcagggtcgttaaggattccatttcttccaagtcctcttccaacttgttaatctttgaacacccagaaag 5179532  T
Q  349 aatgagagttt 359  Q
    ||| |||||||    
T  5179531 aatcagagttt 5179521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 5243793 - 5243914
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| ||||||||||| | |||||||| ||||| ||||| ||||| ||||||||||| ||||||| ||||||| |||| |||||||||||||| |     
T  5243793 ttgttggtgacatccaagaccagatgatagatggaaatacatcgcgtgaaaatccttcatagccacacaaagaaatatatccgatgctttttgaccttac 5243892  T
Q  238 tatggaaaagggcacttttgtt 259  Q
    ||  |||||||||||| |||||    
T  5243893 tactgaaaagggcactcttgtt 5243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 5243910 - 5243998
Alignment:
Q  301 ttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    |||||||||||||||||| ||||| |||||| ||| ||| || || ||||||| ||||||||||||||||||| |||||||| ||||||    
T  5243910 ttgttccaagtcctcttccaacttctcaatcattatacaccctgagagaatgaaagttttcagagatttcaacttatagatgcttcttg 5243998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 157
Target Start/End: Original strand, 5137532 - 5137565
Alignment:
Q  124 gggtgggagattatttgttggtaacatccaagac 157  Q
    |||||||||||||||||||||| |||||||||||    
T  5137532 gggtgggagattatttgttggtgacatccaagac 5137565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 127 - 389
Target Start/End: Original strand, 8769 - 9031
Alignment:
Q  127 tgggagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctt 226  Q
    ||||||||||||||||||  |||||||||||  ||||||||| ||||||||||||||||||||||||||||  || |||| ||||||| || |||| |||    
T  8769 tgggagattatttgttggagacatccaagacttaatgatagatggaaacacatcacgtgagaatccttcatggccgcacaaagaaatatatacaatactt 8868  T
Q  227 tttgacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgt 326  Q
    |||||||| | ||| |||||||||||| ||||||   |||||| || ||||| ||||||||||||||||||||| ||||| | ||||||||| |||||||    
T  8869 tttgaccttactattgaaaagggcactcttgttaatgcagtgttatctgcaagcagagtggttaaagattccatctgttctatgtcctcttccaacttgt 8968  T
Q  327 caatctttaaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    ||||| ||| ||| ||||| ||||||||||||||||||||||||||| |||||||| ||||||    
T  8969 caatcattatacacccagaaagaatgagagttttcagagatttcaacttatagatgcttcttg 9031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 133 - 373
Target Start/End: Complemental strand, 8877815 - 8877575
Alignment:
Q  133 attatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgac 232  Q
    ||||||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||| || |||| ||||||| |||||||||||||||||    
T  8877815 attatttgttggtgacatccaagaccaaatgatagatggaaacacatcacgcgaaaatccttcatagccgcacaaagaaatatatccaatgctttttgac 8877716  T
Q  233 ctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatct 332  Q
    || | ||  ||||| || ||| || ||||  |||||| |||||||| ||||||||||||||||| ||| ||||| |||||||| || ||||||||||||     
T  8877715 cttactaatgaaaatggtactctttttattgcagtgttatttgcaagcagagtggttaaagatttcatctgttctaagtcctcctccaacttgtcaatca 8877616  T
Q  333 ttaaacatccagatagaatgagagttttcagagatttcaac 373  Q
    || |||| ||||| |||||||||| ||| ||||||||||||    
T  8877615 ttgaacacccagaaagaatgagagattttagagatttcaac 8877575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 20838831 - 20838740
Alignment:
Q  140 gttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttga 231  Q
    |||||| ||||||||||| |||||| ||||||||| |||||| |||| ||||||||||||||||| || || ||| ||||||||||||||||    
T  20838831 gttggtgacatccaagaccaaatgagagaaggaaaaacatcatgtgataatccttcatatccacatagtgatatatatccaatgctttttga 20838740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 140 - 362
Target Start/End: Complemental strand, 20812476 - 20812254
Alignment:
Q  140 gttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagta 239  Q
    |||||| ||||||||||| |||||| ||||||||| ||||||||||| |||||||| |||||||| || || ||| || ||||||||||||| ||   ||    
T  20812476 gttggtgacatccaagaccaaatgagagaaggaaaaacatcacgtgataatccttcgtatccacatagtgatatatatgcaatgctttttgatcttgcta 20812377  T
Q  240 tggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaaca 339  Q
    | ||| ||||||||| | | |||||||| |    |||||| ||||  || || |||||||||||    |  || ||||| ||||| ||||||||| ||||    
T  20812376 ttgaatagggcacttgtttgataccagtatttgctgcaattagagctgtcaaggattccatttgcattatatcttcttccaacttctcaatctttgaaca 20812277  T
Q  340 tccagatagaatgagagttttca 362  Q
     ||||| ||||| ||||||||||    
T  20812276 accagaaagaataagagttttca 20812254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 12599054 - 12599142
Alignment:
Q  140 gttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttt 228  Q
    |||||| ||||||||||| || ||| ||||||||| ||||||||||| |||||||||||||||||||  || ||| |||||||||||||    
T  12599054 gttggtgacatccaagaccaattgagagaaggaaaaacatcacgtgataatccttcatatccacacaaggatatatatccaatgctttt 12599142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 15803101 - 15803019
Alignment:
Q  149 atccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttga 231  Q
    |||||||||  ||||| ||||||||| |||||| |||| ||||||| ||||||||| ||||| ||| ||||||||||||||||    
T  15803101 atccaagacctaatgagagaaggaaaaacatcatgtgataatcctttatatccacatagagatatatatccaatgctttttga 15803019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 30418021 - 30417892
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| |||||||||||   |||| | ||||||| ||||||||||  ||||||||| |||||||||| || ||| |  |||||||||| || || |     
T  30418021 ttgttggtgacatccaagaccgtatgagacaaggaaaaacatcacgtgcaaatccttcaaatccacacagggatatataaacaatgcttttcgaactaac 30417922  T
Q  238 tatggaaaagggcacttttgttataccagt 267  Q
    ||||||||| ||  |||||  |||||||||    
T  30417921 tatggaaaaaggtgctttttctataccagt 30417892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 136 - 381
Target Start/End: Original strand, 36213707 - 36213952
Alignment:
Q  136 atttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctc 235  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||||| || |||| ||| ||| |  | |||||||| || ||     
T  36213707 atttgttggtgacatccaagaccaaatgatagatggaaacacatcatgtgagaatccttcatagccgcacaaagatatataagcgatgcttttagatctt 36213806  T
Q  236 agtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatcttta 335  Q
    | ||  ||||| |||||| |||||||  |||||| |||||||||||  ||||||||||||||||| ||||||| ||||||||| || ||||||||||||     
T  36213807 actactgaaaatggcactcttgttattgcagtgttatttgcaatcaaggtggttaaagattccatctgttccatgtcctcttccaatttgtcaatctttg 36213906  T
Q  336 aacatccagatagaatgagagttttcagagatttcaacgtatagat 381  Q
    |||||||||| |||||||||||||| ||  |||| ||| |||||||    
T  36213907 aacatccagaaagaatgagagttttaagtaattttaacttatagat 36213952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 136 - 356
Target Start/End: Complemental strand, 18935589 - 18935369
Alignment:
Q  136 atttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctc 235  Q
    |||||||||  |||||||||||  ||| || ||||||||||||| |||||  ||||||||| |||||||||| ||||||||||||||||||||||| ||     
T  18935589 atttgttggagacatccaagactgaataattgaaggaaacacattacgtgctaatccttcaaatccacacagtgaaataaatccaatgctttttgatctt 18935490  T
Q  236 agtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatcttta 335  Q
    | ||  | |||||||||| |||||| | |||| | ||  |||| ||| ||||| ||||||  ||| ||||| | ||||||||| ||||||||||| |||     
T  18935489 actactgcaaagggcactcttgttacagcagtcttatccgcaaccagggtggtcaaagatgtcatctgttctatgtcctcttccaacttgtcaatttttg 18935390  T
Q  336 aacatccagatagaatgagag 356  Q
     ||||||||||| ||||||||    
T  18935389 tacatccagataaaatgagag 18935369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 389
Target Start/End: Original strand, 34724464 - 34724717
Alignment:
Q  136 atttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctc 235  Q
    |||||||||  |||||||||||  ||| || ||||| ||||||| |||||  ||||||||| ||||||| || ||||||||||||||||||||||| ||     
T  34724464 atttgttggagacatccaagactgaataattgaagggaacacattacgtgcaaatccttcaaatccacaaagtgaaataaatccaatgctttttgatctt 34724563  T
Q  236 agtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatcttta 335  Q
    | ||  | ||| || ||  |||||| |  ||| | ||  ||||  ||| |||| |||||   ||||||||| | ||||||||| ||||||||||| |||     
T  34724564 actactgcaaatggaacccttgttacagaagtcttatccgcaactagaatggtcaaagaagtcatttgttctatgtcctcttccaacttgtcaatttttg 34724663  T
Q  336 aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
     ||||||||| | |||||||||||| |  || |||||  |||||||| ||||||    
T  34724664 tacatccagacacaatgagagtttttactgacttcaatttatagatgcttcttg 34724717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 138 - 389
Target Start/End: Original strand, 22584094 - 22584345
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||| | ||||||||||| |||| ||||| ||||  ||||| | | ||| ||||||||| ||||||| ||||||  | | |||  |||||||||| |     
T  22584094 ttgttgatgacatccaagaccaaatcatagatggaactacatcgcttaagagtccttcatagccacacaaagaaatgtaccaaatagtttttgacctaaa 22584193  T
Q  238 tatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaa 337  Q
    ||| ||||| ||||||||| ||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | ||  ||| ||    
T  22584194 tattgaaaatggcactttttttattgcagtttcatttgcaagcagagtggttaaagattccatttgttccaagtcctcttccaacttataaagtttttaa 22584293  T
Q  338 catccagatagaatgagagttttcagagatttcaacgtatagatgtttcttg 389  Q
    || ||||| |||||||||||||||| |||||||||| | |||||||||||||    
T  22584294 cagccagaaagaatgagagttttcaaagatttcaacttgtagatgtttcttg 22584345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 130 - 369
Target Start/End: Original strand, 47986744 - 47986963
Alignment:
Q  130 gagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgcttttt 229  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| ||||||||||| || |||||                     |    
T  47986744 gagattatttgttggtgacatccaagaccaaatgatagatggaaacacatcacgtgaaaatccttcatagccgcacagg--------------------t 47986823  T
Q  230 gacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaa 329  Q
    ||||||| ||  || || |||||| |||||||  |||||| |||||||| || ||| |||||||||| ||||| ||||| ||||||||| ||||||| ||    
T  47986824 gacctcactactgataaaggcactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaa 47986923  T
Q  330 tctttaaacatccagatagaatgagagttttcagagattt 369  Q
    |||||||||| ||||| |||||||||||||| ||||||||    
T  47986924 tctttaaacagccagaaagaatgagagtttttagagattt 47986963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 130 - 369
Target Start/End: Original strand, 47996031 - 47996250
Alignment:
Q  130 gagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgcttttt 229  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| ||||||||||| || |||||                     |    
T  47996031 gagattatttgttggtgacatccaagaccaaatgatagatggaaacacatcacgtgaaaatccttcatagccgcacagg--------------------t 47996110  T
Q  230 gacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaa 329  Q
    ||||||| ||  || || |||||| |||||||  |||||| |||||||| || ||| |||||||||| ||||| ||||| ||||||||| ||||||| ||    
T  47996111 gacctcactactgataaaggcactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaa 47996210  T
Q  330 tctttaaacatccagatagaatgagagttttcagagattt 369  Q
    |||||||||| ||||| |||||||||||||| ||||||||    
T  47996211 tctttaaacagccagaaagaatgagagtttttagagattt 47996250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 130 - 369
Target Start/End: Original strand, 48005318 - 48005537
Alignment:
Q  130 gagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgcttttt 229  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| ||||||||||| || |||||                     |    
T  48005318 gagattatttgttggtgacatccaagaccaaatgatagatggaaacacatcacgtgaaaatccttcatagccgcacagg--------------------t 48005397  T
Q  230 gacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaa 329  Q
    ||||||| ||  || || |||||| |||||||  |||||| |||||||| || ||| |||||||||| ||||| ||||| ||||||||| ||||||| ||    
T  48005398 gacctcactactgataaaggcactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaa 48005497  T
Q  330 tctttaaacatccagatagaatgagagttttcagagattt 369  Q
    |||||||||| ||||| |||||||||||||| ||||||||    
T  48005498 tctttaaacagccagaaagaatgagagtttttagagattt 48005537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 130 - 369
Target Start/End: Original strand, 48014603 - 48014822
Alignment:
Q  130 gagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgcttttt 229  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||| ||||||||||| || |||||                     |    
T  48014603 gagattatttgttggtgacatccaagaccaaatgatagatggaaacacatcacgtgaaaatccttcatagccgcacagg--------------------t 48014682  T
Q  230 gacctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaa 329  Q
    ||||||| ||  || || |||||| |||||||  |||||| |||||||| || ||| |||||||||| ||||| ||||| ||||||||| ||||||| ||    
T  48014683 gacctcactactgataaaggcactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaa 48014782  T
Q  330 tctttaaacatccagatagaatgagagttttcagagattt 369  Q
    |||||||||| ||||| |||||||||||||| ||||||||    
T  48014783 tctttaaacagccagaaagaatgagagtttttagagattt 48014822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 372
Target Start/End: Original strand, 32411083 - 32411314
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| ||||| ||||| |||||| ||| ||||| || ||| |||| ||||||||||||||||| ||||| ||| || | |||||||| || || |     
T  32411083 ttgttggtgacatctaagaccaaatgagagagggaaatacttcatgtgataatccttcatatccacatagagatatatatgcgatgcttttcgatcttac 32411182  T
Q  238 tatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaa 337  Q
    ||| ||| ||||||| | | ||| ||| || || ||||||||||| || || || |||||||||||   ||     ||||| || || ||||||||| ||    
T  32411183 tattgaacagggcacctcttttacacctgtatcttttgcaatcagtgttgtcaacgattccatttg---cactatttcttccaagttttcaatctttgaa 32411279  T
Q  338 catccagatagaatgagagttttcagagatttcaa 372  Q
    || ||||| || ||||||||||||| |||||||||    
T  32411280 caaccagaaaggatgagagttttcaaagatttcaa 32411314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 138 - 249
Target Start/End: Original strand, 6905806 - 6905917
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| ||||||||||| |||||| ||||||||| | ||||||||| |||||||||||||| || || || ||| |  ||||||||||||| || |     
T  6905806 ttgttggtgacatccaagaccaaatgagagaaggaaaaatatcacgtgataatccttcatatccgcatagggatatatacacaatgctttttgatctaac 6905905  T
Q  238 tatggaaaaggg 249  Q
     |||||||||||    
T  6905906 aatggaaaaggg 6905917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 140 - 372
Target Start/End: Original strand, 3262629 - 3262860
Alignment:
Q  140 gttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagta 239  Q
    |||||| ||||||||||| |||||||||| ||||| ||||||||||| ||||| ||||||||||| || || ||| |||||||||||||||| || | ||    
T  3262629 gttggtgacatccaagaccaaatgatagagggaaaaacatcacgtgaaaatcc-tcatatccacatagggatatatatccaatgctttttgatcttacta 3262727  T
Q  240 tggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaaca 339  Q
    | ||| ||||||| | | | | ||| || || ||||||||||| || || || |||||||| ||  | | ||| ||||| || |||||||||||| | ||    
T  3262728 ttgaatagggcacctctttcacacctgtatcctttgcaatcagtgttgtcaaggattccatctgcactatgtcttcttccaatttgtcaatctttgagca 3262827  T
Q  340 tccagatagaatgagagttttcagagatttcaa 372  Q
     ||||| || ||||||||||||| |||||||||    
T  3262828 accagaaagtatgagagttttcaaagatttcaa 3262860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 139 - 371
Target Start/End: Original strand, 3286516 - 3286748
Alignment:
Q  139 tgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagt 238  Q
    ||||||| |||||||||||  ||||| |||  |||| |||||| |||| ||||||||||||||||| || || ||| |||  ||||||||||| || |      
T  3286516 tgttggtgacatccaagacctaatgagagattgaaaaacatcatgtgataatccttcatatccacatagggatatatatctgatgctttttgatcttaca 3286615  T
Q  239 atggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaac 338  Q
    || ||||||||||||| | | | | | || | |||||||||||| || || || |||||||| ||  | | ||| ||||| ||||||||||||||| |||    
T  3286616 attgaaaagggcacttctttaacagctgtattatttgcaatcagtgttgtcaaggattccatctgcactatgtcttcttccaacttgtcaatctttgaac 3286715  T
Q  339 atccagatagaatgagagttttcagagatttca 371  Q
    | ||||| || |||||||| |||| ||||||||    
T  3286716 aaccagaaaggatgagagtgttcaaagatttca 3286748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 3391536 - 3391644
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| |||||||||||  ||||| ||||||||| |||| | |||| ||||||||||||||||| ||||| ||| |||||||||||||||| ||||     
T  3391536 ttgttggtgacatccaagacctaatgagagaaggaaaaacatgatgtgataatccttcatatccacatagagatatatatccaatgctttttgatctcac 3391635  T
Q  238 tatggaaaa 246  Q
    ||| |||||    
T  3391636 tatcgaaaa 3391644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 3364370 - 3364262
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| | |||||||||  ||||| ||||||||| |||| | |||| ||||||||||||||||| ||||| ||| |||||||||||||||| ||||     
T  3364370 ttgttggtgatatccaagacctaatgagagaaggaaaaacatgatgtgataatccttcatatccacatagagatatatatccaatgctttttgatctcac 3364271  T
Q  238 tatggaaaa 246  Q
    ||| |||||    
T  3364270 tatcgaaaa 3364262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 3407323 - 3407395
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagaga 210  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||| |||||    
T  3407323 ttgttggtgacatccaagaccaaatgatagaaggaaaaacatcacgtgataatccttgatatccacatagaga 3407395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 372
Target Start/End: Original strand, 3325003 - 3325234
Alignment:
Q  141 ttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtat 240  Q
    ||||| ||||||||||| |||||||||||||||| |||||  |||| | ||||||||||||||| || || ||| |||||||||||||| | || |||||    
T  3325003 ttggtgacatccaagaccaaatgatagaaggaaaaacatcgtgtgatagtccttcatatccacagagggatatatatccaatgctttttaatcttagtat 3325102  T
Q  241 ggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacat 340  Q
     ||| | || |||| | ||| |   || || || |||||||| || || || |||||||| ||  | ||  | ||||| ||||||||||||||| ||||     
T  3325103 tgaataaggaacttgttttacagatgtatctttagcaatcagcgttgtcaaggattccatctgcccgaaaccttcttccaacttgtcaatctttgaacaa 3325202  T
Q  341 ccagatagaatgagagttttcagagatttcaa 372  Q
    |||||||  || ||||||| || |||||||||    
T  3325203 ccagataatataagagtttccaaagatttcaa 3325234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 31176046 - 31175955
Alignment:
Q  140 gttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttga 231  Q
    |||||| ||||||||||| |||||| ||||||||| || |||| ||| ||||||||||||||||| ||||| ||| || |||||||||||||    
T  31176046 gttggtgacatccaagaccaaatgagagaaggaaaaacgtcacatgataatccttcatatccacatagagatatatatgcaatgctttttga 31175955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 3315056 - 3314966
Alignment:
Q  141 ttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttga 231  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||| || ||||||||| |||| || || ||| |||||||| |||||||    
T  3315056 ttggtgacatccaagaccaaatgatagaaggaaaaacatcacgtgataaaccttcatattcacatagggatatatatccaatgttttttga 3314966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 372
Target Start/End: Original strand, 3398522 - 3398754
Alignment:
Q  140 gttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagta 239  Q
    |||||| ||||||| ||| |||||| ||||||||| ||||||   || ||||||| ||||||||| ||||| ||| || ||||||||||||| || |  |    
T  3398522 gttggtgacatccatgaccaaatgagagaaggaaaaacatcagacgataatcctttatatccacatagagatatatatgcaatgctttttgatctaacaa 3398621  T
Q  240 tggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaaca 339  Q
    | ||||| || |||| | | | |||||| |    |||||| ||||| || || |||||||||||    |  || ||||| || |||||||||||| ||||    
T  3398622 tcgaaaaaggaacttgtttgacaccagtatttgctgcaattagagttgtcaaggattccatttgcaatatatcttcttccaatttgtcaatctttgaaca 3398721  T
Q  340 tccagatagaatgagagttttcagagatttcaa 372  Q
     ||||| | ||||||||||||||  ||||||||    
T  3398722 accagaaataatgagagttttcactgatttcaa 3398754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 3267198 - 3267288
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttt 228  Q
    |||||||| |||||||||||  ||| |||||| |||| |||||   ||| ||||||||||||||||| ||||| ||| |||| ||||||||    
T  3267198 ttgttggtgacatccaagactgaataatagaatgaaaaacatcttctgataatccttcatatccacatagagatatatatccgatgctttt 3267288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 369
Target Start/End: Complemental strand, 6831 - 6629
Alignment:
Q  167 gaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcagtatggaaaagggcacttttgttataccag 266  Q
    |||||||||||||| ||||| ||||||||| ||||||| | ||||||| |||||||| |||| || |  | ||| |||||||| |||||||||||| |||    
T  6831 gaaggaaacacatcccgtgaaaatccttcaaatccacataaagaaatatatccaatgtttttagatcgtactattgaaaagggaacttttgttatagcag 6732  T
Q  267 tgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagaga 366  Q
    | | ||  |||||||  ||  | || |||||||| |||||||||||||| || || |||||||||||  |||||||||| ||||| | |||||  |||||    
T  6731 tcttatccgcaatcaaggttttcaatgattccatctgttccaagtcctcctccaatttgtcaatcttggaacatccagaaagaatcaaagtttctagaga 6632  T
Q  367 ttt 369  Q
    |||    
T  6631 ttt 6629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0813 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0813
Description:

Target: scaffold0813; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 369
Target Start/End: Original strand, 4701 - 4937
Alignment:
Q  133 attatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgac 232  Q
    |||| ||| |||| |||||||||||  || || | ||||||| ||||| ||||| ||||||||| | ||||| ||||||||| |||||||| || || |     
T  4701 attagttgatggtgacatccaagaccgaacgagaaaaggaaatacatctcgtgaaaatccttcaaagccacatagagaaatatatccaatgtttcttaat 4800  T
Q  233 ctcagtatggaaaagggcacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatct 332  Q
    || | ||| ||||| ||||||||||||||| |||| | ||  |||||||  ||  | || |||||||| |||||||||||||| || || ||||||||||    
T  4801 cttactattgaaaacggcacttttgttatagcagtcttatccgcaatcaaggttttcaatgattccatctgttccaagtcctcctccaatttgtcaatct 4900  T
Q  333 ttaaacatccagatagaatgagagttttcagagattt 369  Q
    |  |||||||||| ||||| | |||||  ||||||||    
T  4901 tggaacatccagaaagaatcaaagtttctagagattt 4937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 138 - 249
Target Start/End: Original strand, 6146 - 6257
Alignment:
Q  138 ttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgacctcag 237  Q
    |||||||| ||||||||||| |||| |  |||||||| ||||||||||| |||||||||||||| || || || ||| |  ||||||||||||| || |     
T  6146 ttgttggtgacatccaagaccaaataagggaaggaaaaacatcacgtgataatccttcatatccgcatagggatatatacacaatgctttttgatctaaa 6245  T
Q  238 tatggaaaaggg 249  Q
    ||||||||||||    
T  6246 tatggaaaaggg 6257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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