View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16735_low_74 (Length: 298)
Name: NF16735_low_74
Description: NF16735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16735_low_74 |
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Alignment Details
Target: chr3 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 14 - 288
Target Start/End: Original strand, 24067336 - 24067610
Alignment:
| Q |
14 |
caaaggaagaaggcgaaaatctcctcaacttagaagacatgcttcacaaacacgtcatcggtcaaaacgaagcaatcagcacaatctgccgagctattcg |
113 |
Q |
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| T |
24067336 |
caaaggaagaaggcgaaaatctcctcaacttagaagacatgcttcacaaacacgtcatcggtcaaaacgaagcaatcagcacaatctgccgagctattcg |
24067435 |
T |
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| Q |
114 |
ccgcgctagagtcggtctaagaaactgcagaaggcctattgcaagtttcatgttcaccggtccctcaggcgtaggaaaaactgaattagccaatgcatta |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24067436 |
ccgcgctagagtcggtctaagaaactgcagaaggcctattgcaagtttcatgttcaccggtccctcaggcgtaggaaaaactgaattagccaatgcatta |
24067535 |
T |
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| Q |
214 |
gctacaaactattttggttcaaaagattcattgataagattagatatgagtgagtacatggatagatacaatgta |
288 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24067536 |
gctacaaactattttggttcaaaagattcattgataagattagatatgagtgagtacatggatagatacaatgta |
24067610 |
T |
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