View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16735_low_96 (Length: 247)
Name: NF16735_low_96
Description: NF16735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16735_low_96 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 14194306 - 14194073
Alignment:
| Q |
14 |
gatgaacttgatgaaagtactgggtgtatttgttcacgacaaccttgtcgtcaagattgtgattaagaatacatcctccatcgtagaacattaaatttgg |
113 |
Q |
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| T |
14194306 |
gatgaacttgatgaaaatactgcatgtatttgttcaaaacaacgttgtcgtcaagattgtgattaagaatacatcctccatcctagaacattaaatttgg |
14194207 |
T |
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| Q |
114 |
aatgtaagtgtaaccttttccataaaataaaatattgagtctgctcagcagtgcaacaaactatcttatctttatgaacaattattgtaaatttgtagtc |
213 |
Q |
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| T |
14194206 |
aatgtaagtgtaaccttttccttaaaataaaatattgagtctgctgagcagtgcaacaaactatcttatctttatgaacaattattgtaaatttgtagtc |
14194107 |
T |
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| Q |
214 |
tccaatgagtagaagaaaaccctcaaattataac |
247 |
Q |
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|||||| ||||||||||||||||||||||||||| |
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| T |
14194106 |
tccaattagtagaagaaaaccctcaaattataac |
14194073 |
T |
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