View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16741_high_14 (Length: 496)
Name: NF16741_high_14
Description: NF16741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16741_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 411; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 17 - 485
Target Start/End: Original strand, 33905412 - 33905886
Alignment:
| Q |
17 |
aataataaatataaggggcataaatcaatacatgcaccacctaatttttggtgatattggtacatgaagttttgtctttagaaattcaagaatcttttta |
116 |
Q |
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| T |
33905412 |
aataataaatataaggggcataaatcaatacatgcaccacctaatttttggtgatattggtacatgaagttttgtctttagaaattcaagaatgttttta |
33905511 |
T |
|
| Q |
117 |
tatacaatatagttatgattttgatagtgaaattgacattgtaatg---atttaggaaag---aagattttggaaatatgattctactattggttggaat |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| | || | ||| | | ||||| ||||||||||||||||||||||||||||| |
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| T |
33905512 |
tatacaatatagttatgattttgatagtgaaattgacattgtaacgttaatgcatgaaggttcatgatttaggaaatatgattctactattggttggaat |
33905611 |
T |
|
| Q |
211 |
tgaagtattaatgtagaatgaaaatttattttggtcttcatttgaagaaaccttttgtagtttcatttctttcttatcttttcccctttagaattgaaaa |
310 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33905612 |
tgaagtattaatgtagaatgaaaatttcttttggtcttcatttgaagaaaccttttgtagtttcatttctttcttatcttttcccctttagaattgaaaa |
33905711 |
T |
|
| Q |
311 |
atatttaagatgtaacactatctattgtagttgtatttttatgtgtatgtgtgtggatagatttggtgttttatcattgagagctttcatgaagttgtct |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33905712 |
atatttaagatgtaacactatctattgtagttgtatttttatgtgtatgtgtgtggatagatttggtgttttatcattgagagctttcatgaagttgtct |
33905811 |
T |
|
| Q |
411 |
agtctctaacactccaatgagacataccttccaaccatctgcagctgaaataataacccatcattattcatctca |
485 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33905812 |
agtctctaacactccaatgagacataccttccaaccatctgcagctgaaataataacccatcattattcatctca |
33905886 |
T |
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