View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16741_high_55 (Length: 265)
Name: NF16741_high_55
Description: NF16741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16741_high_55 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 40005627 - 40005850
Alignment:
| Q |
24 |
ggcaaataaacaacatcctccacaggacaaccatgattaaaatccatcaccgaattcgtctcacctctaaccctaacatcccaaactttcacaaaatgat |
123 |
Q |
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| T |
40005627 |
ggcaaataaacaacatcctccacaggacaaccatgattaaaatccatcaccgaattcgtctcacctctaaccctaacatcccaaactttcacaaaatgat |
40005726 |
T |
|
| Q |
124 |
cataagagccagtaacaaaactatcagaactaacaggcgacgaatcaccacacctaacataatccttatggccacgaaacaccatgaacggagtttcctc |
223 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40005727 |
cataagagccagtaacaaaactatcagaactaaccggcgacgaatcaccacacctaacataatccttatggccacgaaacaccatgaacggagtttcctc |
40005826 |
T |
|
| Q |
224 |
agcaacatcccaatacctaacaac |
247 |
Q |
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|||||||||||||||||||||||| |
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| T |
40005827 |
agcaacatcccaatacctaacaac |
40005850 |
T |
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