View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16741_low_1 (Length: 1025)

Name: NF16741_low_1
Description: NF16741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16741_low_1
NF16741_low_1
[»] chr7 (33 HSPs)
chr7 (1-523)||(36221990-36222507)
chr7 (588-1008)||(36221504-36221926)
chr7 (589-1008)||(36217519-36217934)
chr7 (1-199)||(11279538-11279736)
chr7 (207-523)||(36217999-36218310)
chr7 (628-911)||(32727359-32727642)
chr7 (10-200)||(23759608-23759797)
chr7 (12-199)||(33313052-33313239)
chr7 (1-191)||(46846320-46846511)
chr7 (307-517)||(35938799-35939004)
chr7 (12-199)||(294921-295106)
chr7 (306-497)||(32727038-32727224)
chr7 (628-848)||(35981797-35982017)
chr7 (628-848)||(36003209-36003429)
chr7 (589-848)||(35946529-35946788)
chr7 (306-514)||(35976915-35977118)
chr7 (628-848)||(35977231-35977451)
chr7 (306-514)||(35998327-35998530)
chr7 (628-848)||(35998643-35998863)
chr7 (310-517)||(35981485-35981687)
chr7 (310-517)||(36002897-36003099)
chr7 (12-199)||(3861907-3862094)
chr7 (306-429)||(35957460-35957583)
chr7 (325-497)||(35946271-35946438)
chr7 (645-816)||(35939131-35939306)
chr7 (324-514)||(35951909-35952094)
chr7 (660-828)||(35957808-35957976)
chr7 (40-199)||(6967233-6967393)
chr7 (40-199)||(17866353-17866513)
chr7 (12-72)||(23108045-23108106)
chr7 (12-77)||(23313382-23313448)
chr7 (941-1008)||(36225994-36226063)
chr7 (39-107)||(24783493-24783560)
[»] chr5 (12 HSPs)
chr5 (1-191)||(33575136-33575326)
chr5 (10-199)||(15532200-15532389)
chr5 (10-194)||(15542387-15542571)
chr5 (96-199)||(26711464-26711567)
chr5 (96-199)||(26981201-26981304)
chr5 (40-102)||(26712439-26712501)
chr5 (40-102)||(26982177-26982239)
chr5 (12-194)||(11988867-11989053)
chr5 (89-199)||(22159881-22159992)
chr5 (40-107)||(7650035-7650101)
chr5 (40-116)||(34405934-34406009)
chr5 (40-191)||(14616437-14616588)
[»] chr3 (4 HSPs)
chr3 (27-200)||(22626311-22626484)
chr3 (27-199)||(11138570-11138742)
chr3 (40-199)||(39563510-39563669)
chr3 (55-160)||(20536376-20536479)
[»] chr2 (7 HSPs)
chr2 (10-199)||(31528446-31528635)
chr2 (12-199)||(13710129-13710315)
chr2 (41-189)||(31626637-31626784)
chr2 (27-200)||(40018052-40018225)
chr2 (661-871)||(26328685-26328895)
chr2 (1-100)||(16294945-16295044)
chr2 (306-410)||(26329140-26329244)
[»] chr6 (10 HSPs)
chr6 (27-199)||(13017189-13017361)
chr6 (1-191)||(22221771-22221959)
chr6 (1-191)||(22247606-22247794)
chr6 (10-88)||(30978322-30978400)
chr6 (40-199)||(14790704-14790864)
chr6 (40-199)||(14795732-14795892)
chr6 (12-75)||(15535114-15535177)
chr6 (12-73)||(16883733-16883795)
chr6 (7-73)||(11183962-11184028)
chr6 (27-73)||(15540643-15540689)
[»] chr4 (3 HSPs)
chr4 (27-199)||(12172045-12172218)
chr4 (27-199)||(2541956-2542128)
chr4 (40-116)||(647288-647363)
[»] scaffold0440 (1 HSPs)
scaffold0440 (1-191)||(9910-10101)
[»] chr8 (2 HSPs)
chr8 (12-193)||(12575306-12575487)
chr8 (17-77)||(41778864-41778925)
[»] chr1 (12 HSPs)
chr1 (589-871)||(18117804-18118086)
chr1 (204-514)||(18125078-18125383)
chr1 (309-438)||(18117530-18117659)
chr1 (628-805)||(18125496-18125673)
chr1 (40-201)||(10765005-10765167)
chr1 (40-199)||(13493348-13493508)
chr1 (12-77)||(34066402-34066468)
chr1 (29-194)||(1936701-1936869)
chr1 (7-76)||(8435289-8435358)
chr1 (40-191)||(13496073-13496224)
chr1 (12-78)||(16190299-16190365)
chr1 (917-1008)||(18118138-18118231)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-191)||(24193-24381)


Alignment Details
Target: chr7 (Bit Score: 463; Significance: 0; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 1 - 523
Target Start/End: Complemental strand, 36222507 - 36221990
Alignment:
Q  1 tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36222507 tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttagaaaatcaactcaactgcctagggcaccaatataaattttatacatccttt 36222408  T
Q  101 ttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattacttggattgaatttggttcacttgccaaatatccatcac 200  Q
    |||||||| |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  36222407 ttaataatgaaattgctacgtagaaattaaatacaatcctcgtggtaacgaatttttattacttcaattgaatttggttcatttgccaaatatccatcac 36222308  T
Q  201 acgaatatattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctatccacagacaagtaatttcaacaatagaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36222307 acgaatatattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctatccacagacaagtaatttcaacaatagaa 36222208  T
Q  301 aatgaataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcac 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36222207 aatgaataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcac 36222108  T
Q  401 ctttcttttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttg 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||| || |||||||||||||||||||||    
T  36222107 ctttcttttgttctaagttccaaatctcatggtctcttacgaatatccacttat-----ttaaatcaaattttgataacagagaacttcctaatgttttg 36222013  T
Q  501 acagccagcggaactccagcaca 523  Q
    |||||||||||||||||||||||    
T  36222012 acagccagcggaactccagcaca 36221990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 588 - 1008
Target Start/End: Complemental strand, 36221926 - 36221504
Alignment:
Q  588 aaatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttacta 687  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  36221926 aaatgcccatttcacaaacaaatacaaacagctctcttgcgaaagaccttccaaaatatacgaaggaacagtactcatcatggaagcaattgagttacta 36221827  T
Q  688 cgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctagga 787  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36221826 catgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctagga 36221727  T
Q  788 cgaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacact 887  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36221726 tgaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacact 36221627  T
Q  888 tggtggagttgatgctgaagcaaaagctgagttgataattttgataataatgcgcctaatatcaaaatcattggaga--cacatccaaatcttcaattgg 985  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  36221626 tggtggagttgatgctgaagcaaaagcagagttgataattttgataataatgcgcctaatatcaaaatcattggagacacacacccaaatcttcaattgg 36221527  T
Q  986 aaaatatcatctatcctcttatc 1008  Q
    |||||||||||||||||||||||    
T  36221526 aaaatatcatctatcctcttatc 36221504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 589 - 1008
Target Start/End: Complemental strand, 36217934 - 36217519
Alignment:
Q  589 aatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactac 688  Q
    ||||||||||||||||||| | ||||| |   ||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||    
T  36217934 aatgcccatttcacaaacagagacaaacaatcctctaacgaaagaccttccaaaacatacgaaggaacagtacccatcatggaagcaactgagttgctac 36217835  T
Q  689 gtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggac 788  Q
    |||| |||||||| | ||||||| || || |||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||| ||||||||| ||    
T  36217834 gtgtggtcactataattttacttcctactgcaccaactttgatcaaatcttccaactcaatccattttgcacgatcatcattccatacatcatctagcac 36217735  T
Q  789 gaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacactt 888  Q
    ||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||| ||| | |||||| | |||||||||  ||| |||| |||||||    
T  36217734 gaggataaacttttggccagatagtttacgtcttagatgaatttgtagttgctcaatgtcacagtggttactatcttcttggggagcaataggaacactt 36217635  T
Q  889 ggtggagttgatgctgaagcaaaagctgagttgataattttgataataatgcgcctaatatcaaaatcattggagacacat--ccaaatcttcaattgga 986  Q
    |||| |      |||||||||||| | |||||||||||||||||||  ||  | || ||||||||||||   |||||||||  ||| ||||||||||| |    
T  36217634 ggtgca------gctgaagcaaaaacggagttgataattttgataacgatctgtcttatatcaaaatcaacagagacacatgcccacatcttcaattgaa 36217541  T
Q  987 aaatatcatctatcctcttatc 1008  Q
    |||  |||||||||||||||||    
T  36217540 aaacttcatctatcctcttatc 36217519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 11279538 - 11279736
Alignment:
Q  1 tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttt 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11279538 tcaatcttctaaaaaccaatctttattcgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttt 11279637  T
Q  101 ttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    |||||||| ||||||||| |||||| ||||||| | |||| || ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||    
T  11279638 ttaataatgaaattgctaagtagaaattaaatatagtccttgtggaaacaaatttttattacttcgattgaatttggttcacttgccaaatattcatca 11279736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 207 - 523
Target Start/End: Complemental strand, 36218310 - 36217999
Alignment:
Q  207 atattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctatccacagacaagtaatttcaacaatagaaaatgaa 306  Q
    ||||||| | ||||||| ||||||||||||||||||||| | || |||||| |||||||| | |||||||| |  ||| |||||||| |||  ||| | |    
T  36218310 atattctctggcaatatgctctagcttttcacttccatttatgggttgaactaatccaaggggtatccacaaaatagtcatttcaacgatattaaaggta 36218211  T
Q  307 taatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttct 406  Q
    || ||||||||||||||||||||| |||||||||| || |||| ||| |||||||||| |||||||||||||||||| ||||||||||||||| ||||||    
T  36218210 tagtctttgggatacaaggaaaaacaagcaaaacattgtctcagatatgatggcatttgatcatagcttaattttaaagcaggtaaaatatcatctttct 36218111  T
Q  407 tttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagcc 506  Q
    | |||||||| ||||| ||||||||||||||||| |||| ||||||     || |||||||||||||||||| |||||||||||||  ||| | ||||||    
T  36218110 tctgttctaaattccatatctcatggtctcttacaaataaccactt-----atctaaatcaaattttgagaacagagaacttcctaccgttctcacagcc 36218016  T
Q  507 agcggaactccagcaca 523  Q
    |||||||||||||||||    
T  36218015 agcggaactccagcaca 36217999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 628 - 911
Target Start/End: Original strand, 32727359 - 32727642
Alignment:
Q  628 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 727  Q
    ||||||||||||||||  ||||| |||| | |||||||||| ||||||| |||||| ||||||||||||||||||| ||| ||| || || |||| ||||    
T  32727359 gaaagaccttccaaaacgtacgagggaatagtacccatcattgaagcaaatgagttgctacgtgtcgtcactatgattttgcttcctgctgcaccgactt 32727458  T
Q  728 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg 827  Q
    | ||||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||| || | |||||| ||||||| |||||||||||||  |||    
T  32727459 ttatcaaatctatcaactcaatccattttgcacgatcatcattccatatatcgtctaggacaagcaaaaacttctgaccagcaagtttatgtctttaacg 32727558  T
Q  828 aatttgtagttgctcaatatcaaaatggttaatgtcttcttggttagccatagcaacacttggtggagttgatgctgaagcaaa 911  Q
    | ||||||| |||||||||||||| | ||| |||| |||||||| ||| | || |||||||||||||  ||| |||| ||||||    
T  32727559 actttgtagctgctcaatatcaaagttgttgatgttttcttggtgagcaagagaaacacttggtggaactgaagctggagcaaa 32727642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 23759797 - 23759608
Alignment:
Q  10 taaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataata 109  Q
    |||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||     
T  23759797 taaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcctagggcaccaatataaa-tttatacatcctttttaa-aatg 23759700  T
Q  110 aaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaatatccatcac 200  Q
    || |||||| |||||| ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  23759699 aatttgctaagtagaagttaaatacagtcctcgtagaaacgaactttttattacttcgattgaatttggttcacttgccaaatatctatcac 23759608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 33313052 - 33313239
Alignment:
Q  12 aaaaccaatctttctttgtttttaat-cagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataa 110  Q
    |||||||||| ||  || |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  33313052 aaaaccaatcctttattatttttaattccgtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttacacatcctttttaataatga 33313151  T
Q  111 aattgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    |||||||| |||||| || |||||| |||||||||||||||||||||||||||| ||||||||||| |||||||  |||||||| ||||    
T  33313152 aattgctaagtagaagtt-aatacagtcctcgtagaaacgaatttttattacttcgattgaatttgtttcacttctcaaatatctatca 33313239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 46846511 - 46846320
Alignment:
Q  1 tcaatcttctaaaaaccaatctttctttgtttttaa-tcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctt 99  Q
    ||||| ||||||||||||||||||  |||||||| | |||||||||  ||  || |||||||||||||||||||||||||||||||||||||||||||||    
T  46846511 tcaattttctaaaaaccaatcttttattgttttttagtcagtttataataagaattcaactcaactgcctagggcaccaatataaattttatacatcctt 46846412  T
Q  100 tttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattacttggattgaatttggttcacttgccaaat 191  Q
    ||||||||| ||||||||| |||||| ||||||||| ||||||| |||||  ||||||||||||| |||||||| || ||||||||||||||    
T  46846411 tttaataatgaaattgctaagtagaaattaaatacagtcctcgtggaaacatatttttattacttcgattgaatctgattcacttgccaaat 46846320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 307 - 517
Target Start/End: Original strand, 35938799 - 35939004
Alignment:
Q  307 taatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttct 406  Q
    |||||||||||||| | |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||  || ||    
T  35938799 taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggcatttgatcatagcttaattttagtgcaggtaaaatatcattttgct 35938898  T
Q  407 tttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagcc 506  Q
    | |||||||| ||||| ||||||   |||||||| |||  ||||||     |||||||||||||||||| || |||||||||||||||||||| ||||||    
T  35938899 tctgttctaaattccatatctcagaatctcttacaaattcccactt-----atttaaatcaaattttgaaaacagagaacttcctaatgttttcacagcc 35938993  T
Q  507 agcggaactcc 517  Q
    || ||||||||    
T  35938994 agtggaactcc 35939004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 294921 - 295106
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaa 111  Q
    |||||||||| || |||| |||||| ||| ||||||||||||| |||||  ||||||| ||||| ||||||||||||  |||||||||||||||||| ||    
T  294921 aaaaccaatccttatttgcttttaaccagcttatgttacaaaa-caact--actgcctcgggcatcaatataaatttattacatcctttttaataatgaa 295017  T
Q  112 attgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||||| |||||| ||||||||| ||||||| || || || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  295018 attgctaagtagaagttaaatacagtcctcgtggacacaaattttttattacttcgattgaatttggttcacttgccaaatatccatca 295106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 306 - 497
Target Start/End: Original strand, 32727038 - 32727224
Alignment:
Q  306 ataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttc 405  Q
    ||||||||||||||| | ||||||  |||||||||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||| |||||    
T  32727038 ataatctttgggataaagggaaaagaaagcaaaacattgcctcaaataggatggcatttgatcatagcttaacttcaatgcaggtaaaatatcatctttc 32727137  T
Q  406 ttttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgtt 497  Q
    || |||||||| ||||| ||||||   ||||| || |||||||||||     |||||||||| ||||||||||||  ||||||| |||||||    
T  32727138 ttctgttctaaattccatatctcagaatctctcacaaatatccactt-----atttaaatcatattttgagaataaggaacttcgtaatgtt 32727224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 628 - 848
Target Start/End: Original strand, 35981797 - 35982017
Alignment:
Q  628 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 727  Q
    |||||||||| ||||| ||||| |||||||  ||||||||| |||| |||||||||||||||||| ||||| |  | ||| ||| |  || | |||||||    
T  35981797 gaaagacctttcaaaagatacggaggaacatcacccatcatcgaagaaattgagttactacgtgtagtcaccaaaattttgcttccagctgcgccaactt 35981896  T
Q  728 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg 827  Q
    ||||||||| |  ||||||||||||||||||||| ||||||||||  | |||||| |  || || | ||||||||| |  ||||||||||||||||||||    
T  35981897 tgatcaaatctttcaactcaatccattttgcacgatcatcattccgcacatcatccaacacaagtaaaaacttttgtctggaaagtttatgtcttagacg 35981996  T
Q  828 aatttgtagttgctcaatatc 848  Q
    | |||||||||||||||||||    
T  35981997 agtttgtagttgctcaatatc 35982017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 628 - 848
Target Start/End: Original strand, 36003209 - 36003429
Alignment:
Q  628 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 727  Q
    |||||||||| ||||| ||||| |||||||  ||||||||| |||| |||||||||||||||||| ||||| |  | ||| ||| |  || | |||||||    
T  36003209 gaaagacctttcaaaagatacggaggaacatcacccatcatcgaagaaattgagttactacgtgtagtcaccaaaattttgcttccagctgcgccaactt 36003308  T
Q  728 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg 827  Q
    ||||||||| |  ||||||||||||||||||||| ||||||||||  | |||||| |  || || | ||||||||| |  ||||||||||||||||||||    
T  36003309 tgatcaaatctttcaactcaatccattttgcacgatcatcattccgcacatcatccaacacaagtaaaaacttttgtctggaaagtttatgtcttagacg 36003408  T
Q  828 aatttgtagttgctcaatatc 848  Q
    | |||||||||||||||||||    
T  36003409 agtttgtagttgctcaatatc 36003429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 589 - 848
Target Start/End: Original strand, 35946529 - 35946788
Alignment:
Q  589 aatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactac 688  Q
    ||||||||||| ||||||| | ||||| |  ||| | | |||||||||||||||||||| | |||||||  ||||||||| |||||||||| |||||| |    
T  35946529 aatgcccatttgacaaacagagacaaacaattctttggagaaagaccttccaaaatatatggaggaacatcacccatcatcgaagcaattgcgttactgc 35946628  T
Q  689 gtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggac 788  Q
    |||| ||||| || | ||| ||| ||  | |||||||||| ||||||| |  ||| |||| ||| |||||||| |||||||||||||  |||||||  ||    
T  35946629 gtgttgtcaccataattttgcttcctggtgcaccaacttttatcaaatctttcaattcaagccactttgcacgatcatcattccatacgtcatctaacac 35946728  T
Q  789 gaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatc 848  Q
    ||  | ||||||||||||||||||||| |||||||||||| ||  ||||||| |||||||    
T  35946729 gactaaaaacttttgaccagaaagtttttgtcttagacgacttactagttgcacaatatc 35946788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 306 - 514
Target Start/End: Original strand, 35976915 - 35977118
Alignment:
Q  306 ataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttc 405  Q
    ||||||||||||||| | ||||| |||| ||||||| || |||| ||| |||||||||| |||||||||||||||||  |||||||||||| || |||||    
T  35976915 ataatctttgggataaagggaaatataaacaaaacattgtctcatatatgatggcatttgatcatagcttaattttagcgcaggtaaaataccatctttc 35977014  T
Q  406 ttttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagc 505  Q
    ||||||||||| ||||| ||||||  ||| || ||||||  ||||||       ||| |||||| |||||||| |||||||||||||||||| | |||||    
T  35977015 ttttgttctaaattccacatctcagagtccctaacgaattcccactt-----gcttatatcaaagtttgagaagagagaacttcctaatgttctcacagc 35977109  T
Q  506 cagcggaac 514  Q
     ||||||||    
T  35977110 tagcggaac 35977118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 628 - 848
Target Start/End: Original strand, 35977231 - 35977451
Alignment:
Q  628 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 727  Q
    |||||||||| ||||| ||| | |||||||  ||||||||| ||||||||||||||||||||||| ||||| || | ||| ||| ||  | |||||||||    
T  35977231 gaaagacctttcaaaagatatggaggaacatcacccatcatcgaagcaattgagttactacgtgttgtcacgataattttgcttcctggtgcaccaactt 35977330  T
Q  728 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg 827  Q
    | ||||||| |  ||| |||| ||| |||||||| |||||||||||||  |||||||  ||||  | ||||||||||||||||||||| ||||| |||||    
T  35977331 ttatcaaatctttcaattcaagccactttgcacgatcatcattccatacgtcatctaacacgactaaaaacttttgaccagaaagtttttgtctgagacg 35977430  T
Q  828 aatttgtagttgctcaatatc 848  Q
    | ||  ||||||| |||||||    
T  35977431 acttactagttgcacaatatc 35977451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 306 - 514
Target Start/End: Original strand, 35998327 - 35998530
Alignment:
Q  306 ataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttc 405  Q
    ||||||||||||||| | ||||| |||| ||||||| || |||| ||| |||||||||| |||||||||||||||||  |||||||||||| || |||||    
T  35998327 ataatctttgggataaagggaaatataaacaaaacattgtctcatatatgatggcatttgatcatagcttaattttagcgcaggtaaaataccatctttc 35998426  T
Q  406 ttttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagc 505  Q
    ||||||||||| ||||| ||||||  ||| || ||||||  ||||||       ||| |||||| |||||||| |||||||||||||||||| | |||||    
T  35998427 ttttgttctaaattccacatctcagagtccctaacgaattcccactt-----gcttatatcaaagtttgagaagagagaacttcctaatgttctcacagc 35998521  T
Q  506 cagcggaac 514  Q
     ||||||||    
T  35998522 tagcggaac 35998530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 628 - 848
Target Start/End: Original strand, 35998643 - 35998863
Alignment:
Q  628 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 727  Q
    |||||||||| ||||| ||| | |||||||  ||||||||| ||||||||||||||||||||||| ||||| || | ||| ||| ||  | |||||||||    
T  35998643 gaaagacctttcaaaagatatggaggaacatcacccatcatcgaagcaattgagttactacgtgttgtcacgataattttgcttcctggtgcaccaactt 35998742  T
Q  728 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacg 827  Q
    | ||||||| |  ||| |||| ||| |||||||| |||||||||||||  |||||||  ||||  | ||||||||||||||||||||| ||||| |||||    
T  35998743 ttatcaaatctttcaattcaagccactttgcacgatcatcattccatacgtcatctaacacgactaaaaacttttgaccagaaagtttttgtctgagacg 35998842  T
Q  828 aatttgtagttgctcaatatc 848  Q
    | ||  ||||||| |||||||    
T  35998843 acttactagttgcacaatatc 35998863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 310 - 517
Target Start/End: Original strand, 35981485 - 35981687
Alignment:
Q  310 tctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttctttt 409  Q
    ||||||||||| | |||||| ||||||||||| |||||||||||||||||||||| |||||| ||||| || |  ||||||||||||||| ||||||| |    
T  35981485 tctttgggatagagggaaaagtaagcaaaacactgcctcaaataggatggcatttgatcataacttaacttcagggcaggtaaaatatcatctttcttct 35981584  T
Q  410 gttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagc 509  Q
    | ||||  ||||| | ||||   || ||||| |||| ||||||     |||||||||||  ||||| || || ||||||||||||||||||||||| ||     
T  35981585 gctctagattccataactcagaatcccttacaaatacccactt-----atttaaatcaagctttgaaaacagggaacttcctaatgttttgacagctagt 35981679  T
Q  510 ggaactcc 517  Q
    ||||||||    
T  35981680 ggaactcc 35981687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 310 - 517
Target Start/End: Original strand, 36002897 - 36003099
Alignment:
Q  310 tctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttctttt 409  Q
    ||||||||||| | |||||| ||||||||||| |||||||||||||||||||||| |||||| ||||| || |  ||||||||||||||| ||||||| |    
T  36002897 tctttgggatagagggaaaagtaagcaaaacactgcctcaaataggatggcatttgatcataacttaacttcagggcaggtaaaatatcatctttcttct 36002996  T
Q  410 gttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagc 509  Q
    | ||||  ||||| | ||||   || ||||| |||| ||||||     |||||||||||  ||||| || || ||||||||||||||||||||||| ||     
T  36002997 gctctagattccataactcagaatcccttacaaatacccactt-----atttaaatcaagctttgaaaacagggaacttcctaatgttttgacagctagt 36003091  T
Q  510 ggaactcc 517  Q
    ||||||||    
T  36003092 ggaactcc 36003099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 3862094 - 3861907
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttac--aaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataata 109  Q
    |||||||||||||  ||||||||||||||||||||||||  |||||||| | |||||||||||||| ||   | ||||| |||||||| ||||||||||     
T  3862094 aaaaccaatcttttattgtttttaatcagtttatgttacaaaaaatcaattgaactgcctagggcatca--ttgaatttaatacatcc-ttttaataatg 3861998  T
Q  110 aaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt-tttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||||||| |||||| ||||  ||||||||||| || || |||| |||||||||| |||||| | | || ||||||||||||||| ||||    
T  3861997 aaattgctaagtagaagttaataacaatcctcgtggatacaaattatttattacttcgattgactctagtacacttgccaaatatctatca 3861907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 306 - 429
Target Start/End: Original strand, 35957460 - 35957583
Alignment:
Q  306 ataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttc 405  Q
    ||||||||||||||| | |||||||||||||||||| || |||| ||| |||||||||| |||||| ||||||||||  |||||||||||||||    ||    
T  35957460 ataatctttgggataaagggaaaaataagcaaaacattgtctcagatatgatggcatttgatcataacttaattttagcgcaggtaaaatatcattaatc 35957559  T
Q  406 ttttgttctaagttccaaatctca 429  Q
    ||||||||||| ||||| ||||||    
T  35957560 ttttgttctaaattccacatctca 35957583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 325 - 497
Target Start/End: Original strand, 35946271 - 35946438
Alignment:
Q  325 gaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttcttttgttctaagttccaaa 424  Q
    ||||||||||||||||| || || | ||| |||||||||| |||||| ||||||||||  |||||||| |||||| |||||||||||||||| ||||| |    
T  35946271 gaaaaataagcaaaacattgtcttagatatgatggcatttgatcataacttaattttagcgcaggtaagatatcatctttcttttgttctaaattccaca 35946370  T
Q  425 tctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgtt 497  Q
    |||||  ||| || ||||||  ||||||     | ||| |||||| |||||||| ||||||||| ||||||||    
T  35946371 tctcagagtccctaacgaattcccactt-----acttatatcaaagtttgagaagagagaacttgctaatgtt 35946438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 645 - 816
Target Start/End: Original strand, 35939131 - 35939306
Alignment:
Q  645 atacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaac 744  Q
    |||||| |||||| | ||| |||| |||||||| || ||||| ||||| ||||| |||| ||| | |||| ||   |||||||| ||||||| |  ||||    
T  35939131 atacgagggaacagtgcccgtcattgaagcaatcgatttactgcgtgttgtcacaatgattttgcattctactgtgccaacttttatcaaatctttcaac 35939230  T
Q  745 tcaatccattttgcacggtcatc----attccatatatcatctaggacgaggataaacttttgaccagaaagttta 816  Q
    ||||||||||||| ||| |||||    ||||||||| |||||||  ||||| | ||||||||||||||||||||||    
T  35939231 tcaatccattttgaacgatcatccatcattccatatgtcatctaacacgagtaaaaacttttgaccagaaagttta 35939306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 324 - 514
Target Start/End: Original strand, 35951909 - 35952094
Alignment:
Q  324 ggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttcttttgttctaagttccaa 423  Q
    ||||||| | |||| |||||| || | |||||||| ||||| ||||||||||||||| |  ||||||||||||||| |||||| ||||||||| ||||||    
T  35951909 ggaaaaagaggcaatacaatgtcttagataggatgacatttgatcatagcttaatttcagggcaggtaaaatatcatctttctgttgttctaaattccaa 35952008  T
Q  424 atctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgacagccagcggaac 514  Q
    ||  ||  |||||| || |||  ||||||     | ||||||| || |||||||| || |||||||| |||| ||| |||||||| |||||    
T  35952009 atagcagagtctctgacaaattcccactt-----acttaaatcgaagtttgagaagagggaacttcccaatgatttcacagccagtggaac 35952094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 660 - 828
Target Start/End: Original strand, 35957808 - 35957976
Alignment:
Q  660 acccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgca 759  Q
    ||||||||| ||||||||||||||||| ||||| ||||| || | ||| ||| ||  | |||||||||| ||||| |  | ||| |||| ||| ||||||    
T  35957808 acccatcattgaagcaattgagttactgcgtgttgtcacgataattttgcttcctggtgcaccaacttttatcaattcgatcaattcaagccactttgca 35957907  T
Q  760 cggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacga 828  Q
    || |||||||||||||  |||||||  || |  | ||||||||||||||||||||| ||| | ||||||    
T  35957908 cgatcatcattccatacgtcatctaacacaactaaaaacttttgaccagaaagtttttgtttgagacga 35957976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 6967233 - 6967393
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatc 138  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||    
T  6967233 gtttatgttacaaaa-caactcaactgcctagggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtc 6967330  T
Q  139 ctcgtagaaacgaa--tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||| || |||||  || ||| ||||| ||| |  |||||| ||||||||||||||| ||||    
T  6967331 ctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaaatatctatca 6967393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 17866513 - 17866353
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggcac-caatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatc 138  Q
    ||||||||||||||| || |||||||||||||||||  |||||||||||| ||||||||||||| ||||  |||||||   |||||| ||||  ||  ||    
T  17866513 gtttatgttacaaaa-cagctcaactgcctagggcaatcaatataaattt-atacatcctttttgataaagaaattgccgagtagaaattaacaacggtc 17866416  T
Q  139 ctcgtagaaacgaa--tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||| || |||||  || ||| ||||| ||| |  |||||| ||||||||||||||| ||||    
T  17866415 ctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaaatatctatca 17866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 23108045 - 23108106
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttacaaa-atcaactcaactgcctagg 72  Q
    |||||||||||||  |||||||||||  |||||||||||||| ||||||||||||| |||||    
T  23108045 aaaaccaatcttttattgtttttaattcgtttatgttacaaacatcaactcaactgtctagg 23108106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 23313448 - 23313382
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttac-aaaatcaactcaactgcctagggcacc 77  Q
    ||||||| |||||  |||||||||||  ||||||||||| |||||||| |||||| |||||||||||    
T  23313448 aaaaccattcttttattgtttttaattcgtttatgttacaaaaatcaattcaactacctagggcacc 23313382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 941 - 1008
Target Start/End: Original strand, 36225994 - 36226063
Alignment:
Q  941 gcctaatatcaaaatcattggaga--cacatccaaatcttcaattggaaaatatcatctatcctcttatc 1008  Q
    ||||||||||||||||||  ||||  |||| ||| |||||||||||||||| |||||| | |||||||||    
T  36225994 gcctaatatcaaaatcatcagagatacacacccacatcttcaattggaaaagatcatcaaccctcttatc 36226063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 24783493 - 24783560
Alignment:
Q  39 agtttatgttacaaaatcaactcaactgcctagggcac-caatataaattttatacatcctttttaataa 107  Q
    |||||||||||||||| |||||||||||||| || ||  |||||||||||| ||||||||||||| ||||    
T  24783493 agtttatgttacaaaa-caactcaactgccttggacaatcaatataaattt-atacatcctttttgataa 24783560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 3e-63; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 33575136 - 33575326
Alignment:
Q  1 tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttt 100  Q
    ||||| ||||||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33575136 tcaattttctaaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcctagggcaccaatataaa-tttatacatccttt 33575234  T
Q  101 ttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaat 191  Q
    ||||||||||||||||||  ||||| ||||||||| |||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  33575235 ttaataataaaattgctaaatagaagttaaatacagtcctcgtgaaaacgaattttttattacttcgattgaatttggttcacttgccaaat 33575326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 15532389 - 15532200
Alignment:
Q  10 taaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataata 109  Q
    |||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  15532389 taaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcctagggcaccaatataaa-tttatacatcctttttaataatg 15532291  T
Q  110 aaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||||||| |||||| ||||||||| ||||||| |||||||| |||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  15532290 aaattgctaagtagaagttaaatacagtcctcgtggaaacgaattttttattacttcgatcgaatttggttcacatgccaaatatctatca 15532200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 15542571 - 15542387
Alignment:
Q  10 taaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataata 109  Q
    |||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  15542571 taaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcctagggcaccaatataaa-tttatacatcctttttaataatg 15542473  T
Q  110 aaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaatatc 194  Q
    |||||| || |||||| ||||||||| ||||||| |||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  15542472 aaattgttaagtagaagttaaatacagtcctcgtggaaacgaattttttattacttcgatcgaatttggttcacttgccaaatatc 15542387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 26711567 - 26711464
Alignment:
Q  96 cctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaattttt-attacttggattgaatttggttcacttgccaaatatc 194  Q
    ||||||| ||||| ||||||||| |||||| |||| |||| ||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  26711567 cctttttgataatgaaattgctaagtagaagttaa-tacagtcctcgtggaaacgaattttttattacttcaattgaatttggttcacttgccaaatatc 26711469  T
Q  195 catca 199  Q
     ||||    
T  26711468 tatca 26711464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 26981304 - 26981201
Alignment:
Q  96 cctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaattttt-attacttggattgaatttggttcacttgccaaatatc 194  Q
    ||||||| ||||| ||||||||| |||||| |||| |||| ||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  26981304 cctttttgataatgaaattgctaagtagaagttaa-tacagtcctcgtggaaacgaattttttattacttcaattgaatttggttcacttgccaaatatc 26981206  T
Q  195 catca 199  Q
     ||||    
T  26981205 tatca 26981201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 26712501 - 26712439
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttttt 102  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  26712501 gtttatgttacaaaatcaactcaactgtctagggcactaatataaattttacacatccttttt 26712439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 26982239 - 26982177
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttttt 102  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  26982239 gtttatgttacaaaatcaactcaactgtctagggcactaatataaattttacacatccttttt 26982177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 11989053 - 11988867
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttacaaaa-tcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataa 110  Q
    |||| ||||||||  | |||||||||| ||||||||||||||| ||||||||||||||||||| |||| |  |  |  ||||| ||||| ||| |||| |    
T  11989053 aaaatcaatcttttatcgtttttaatctgtttatgttacaaaaatcaactcaactgcctaggggaccattgaatttaatatacgtccttattactaatga 11988954  T
Q  111 aattgctacg--tagaatttaaatacaatcctcgtagaaacgaatt-tttattacttggattgaatttggttcacttgccaaatatc 194  Q
    |||||||| |  ||||| ||||  ||  | ||||| |||||||||| |||||||||| ||||||||||| |||||||| ||||||||    
T  11988953 aattgctaagtatagaagttaagaacggttctcgtggaaacgaattatttattacttcgattgaatttgattcacttgtcaaatatc 11988867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 22159881 - 22159992
Alignment:
Q  89 tatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgcc 187  Q
    |||||||||||||| | ||  ||||||||| |||||| ||||||||| ||||||| ||||| || |||||||||||| ||| ||||||||| |||||| |    
T  22159881 tatacatcctttttgacaaagaaattgctaagtagaagttaaatacagtcctcgtggaaacaaattttttattacttcgatcgaatttggtacacttgtc 22159980  T
Q  188 aaatatccatca 199  Q
    ||||||| ||||    
T  22159981 aaatatctatca 22159992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 7650101 - 7650035
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggc-accaatataaattttatacatcctttttaataa 107  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||| ||||    
T  7650101 gtttatgttacaaaa-caactcaactgcctagggcaatcaatataaa-tttatacatcctttttgataa 7650035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 34405934 - 34406009
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggc-accaatataaattttatacatcctttttaataataaaattgc 116  Q
    |||||||||||| || ||||||||||||||||||| | ||||||||| |||||||||||||||| ||||  |||||||    
T  34405934 gtttatgttacacaa-caactcaactgcctagggcaatcaatataaa-tttatacatcctttttgataaagaaattgc 34406009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 191
Target Start/End: Complemental strand, 14616588 - 14616437
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggcac-caatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatc 138  Q
    ||||||||||||||| |||||||||| ||||||| |  |||||||||||  ||||||||||||| ||||  |||||||   |||||| ||||  ||  ||    
T  14616588 gtttatgttacaaaa-caactcaacttcctagggtaatcaatataaattc-atacatcctttttgataaagaaattgccgagtagaaattaacaacggtc 14616491  T
Q  139 ctcgtagaaacgaattt--ttattacttggattgaatttggttcacttgccaaat 191  Q
    ||||| || ||||||||  ||||||||| ||| |  |||||||||||||||||||    
T  14616490 ctcgtggatacgaatttatttattacttcgatagt-tttggttcacttgccaaat 14616437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 1e-62; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 27 - 200
Target Start/End: Complemental strand, 22626484 - 22626311
Alignment:
Q  27 ttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaat 126  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||     
T  22626484 ttgtttttaatcagtttatgttactaaatcaactcaactgcctagggcaccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaag 22626386  T
Q  127 ttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaatatccatcac 200  Q
    ||||||||| ||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  22626385 ttaaatacagtcctcgtggaaacgaactttttattacttcgatcgaatttggttcacttgccaaatatctatcac 22626311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 11138742 - 11138570
Alignment:
Q  27 ttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaat 126  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||     
T  11138742 ttgtttttaatcagtttatgttactaaatcaactcaactgcctagggcaccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaag 11138644  T
Q  127 ttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||||||| ||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  11138643 ttaaatacagtcctcgtggaaacgaactttttattacttcgatcgaatttggttcacttgccaaatatctatca 11138570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 39563669 - 39563510
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcc 139  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| ||||||||| |||||| || |||||| |||    
T  39563669 gtttatgttacaaaatcaactcaactgcctagggcactaatataaattttacacatccttttttataatgaaattgctaagtagaagtt-aatacagtcc 39563571  T
Q  140 tcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    |||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  39563570 tcgtggaaacgaattttttattactttgattgaatttggttcacttgccaaatatctatca 39563510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 20536479 - 20536376
Alignment:
Q  55 tcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaatt 154  Q
    ||||| |||||||||||||||||  |   |||||  |||||||||||||||||| ||||| ||| |||||| ||||||||| ||||||| || ||||  |    
T  20536479 tcaacccaactgcctagggcacccttg--aatttactacatcctttttaataatgaaatttctaagtagaagttaaatacagtcctcgtggatacgatct 20536382  T
Q  155 tttatt 160  Q
    ||||||    
T  20536381 tttatt 20536376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 3e-60; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 31528446 - 31528635
Alignment:
Q  10 taaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataata 109  Q
    |||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  31528446 taaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcctagggcaccaatataaa-tttatacatcctttttaataatg 31528544  T
Q  110 aaattgctacgtagaatttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||||||| |||||| ||||||||| ||||||| ||||| || |||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  31528545 aaattgctaagtagaagttaaatacagtcctcgtggaaacaaattttttattacttcgatcgaatttggttcacttgccaaatatctatca 31528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 13710129 - 13710315
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaa 111  Q
    |||||||||||||  |||||||||||| |||||||||||||  ||||||||||| |||  |||| |||||||||||||||||||||||||||||||| ||    
T  13710129 aaaaccaatcttttattgtttttaatccgtttatgttacaac-tcaactcaacttcctcaggcatcaatataaattttatacatcctttttaataatgaa 13710227  T
Q  112 attgctacgtagaatttaaatacaatcctcgtagaaacgaatttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||||| |||||| ||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  13710228 attgctaagtagaagttaaatacagttctcgtaaaaacgaatttttattacttcgattgaatttggttcacttgccaaatatctatca 13710315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 41 - 189
Target Start/End: Original strand, 31626637 - 31626784
Alignment:
Q  41 tttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatcct 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| || |||||| ||||    
T  31626637 tttatgttacaaaatcaactcaactgcctagggcaccaatataaattttacacatcctttttaataatgaaattgctaagtagaagtt-aatacagtcct 31626735  T
Q  141 cgtagaaacgaatttttattacttggattgaatttggttcacttgccaa 189  Q
    | | |||||||||||||||||||| ||||||||||||||||||| ||||    
T  31626736 cattgaaacgaatttttattacttcgattgaatttggttcacttaccaa 31626784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 27 - 200
Target Start/End: Original strand, 40018052 - 40018225
Alignment:
Q  27 ttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaat 126  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | || |||     
T  40018052 ttgtttttaatccgtttatgttacaaa-tcaactcaactgcctagggcatcaatataaattttatacatcctttttaataaaaaaattgccaagtcgaag 40018150  T
Q  127 ttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaatatccatcac 200  Q
    |||||| || |||| ||  |||| || |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  40018151 ttaaatgcactccttgtgaaaacaaattttttattacttcgattgaatttggttcacttgccaaatattcatcac 40018225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 661 - 871
Target Start/End: Complemental strand, 26328895 - 26328685
Alignment:
Q  661 cccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcac 760  Q
    |||||||| ||||||||  ||||||||||||| ||||||| || ||| |||||| || |||||||||| |||| || |  ||||||||||||||||| ||    
T  26328895 cccatcatcgaagcaatcaagttactacgtgttgtcactaagattttgctttctactgcaccaacttttatcagatctttcaactcaatccattttgaac 26328796  T
Q  761 ggtcatcattccatatatcatctaggacgaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaat 860  Q
    ||| ||||| |||||||||||||| |||||| | |||||||| ||| ||||| |||||||| |||||| |   || ||||||||||||||| || | |||    
T  26328795 ggttatcatcccatatatcatctaagacgagtacaaactttttacctgaaagcttatgtctaagacgactcactaattgctcaatatcaaagtgttcaat 26328696  T
Q  861 gtcttcttggt 871  Q
    || ||||||||    
T  26328695 gttttcttggt 26328685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 16294945 - 16295044
Alignment:
Q  1 tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttt 100  Q
    ||||| |||| ||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16294945 tcaattttctgaaaactaatctttatttgtttttaatcggtttatgatacaaaatcaactcaactgcctagggcatcaatataaattttatacatccttt 16295044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 306 - 410
Target Start/End: Complemental strand, 26329244 - 26329140
Alignment:
Q  306 ataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttc 405  Q
    ||||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| || |   |||||||||||||| ||||     
T  26329244 ataatctttgggaaaaagggaaaaataagcaaaacaatgtctcaaataggatggcatttgatcatagcttaacttaagcacaggtaaaatatcatctttg 26329145  T
Q  406 ttttg 410  Q
    |||||    
T  26329144 ttttg 26329140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 1e-59; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 13017361 - 13017189
Alignment:
Q  27 ttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaat 126  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||     
T  13017361 ttgtttttaatcagtttatgttactaaatcaactcaactgcctagggcaccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaag 13017263  T
Q  127 ttaaatacaatcctcgtagaaacgaa-tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||||| | ||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  13017262 ttaaatatagtcctcgtggaaacgaactttttattacttcgatcgaatttggttcacttgccaaatatctatca 13017189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 22221771 - 22221959
Alignment:
Q  1 tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttt 100  Q
    ||||| ||||||||||||||  ||  ||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  22221771 tcaattttctaaaaaccaattctttattgtttttaattagtttat--tactaaatcaactcaactgcctagggcaccaataataattt-atacatccttt 22221867  T
Q  101 ttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaattt-ttattacttggattgaatttggttcacttgccaaat 191  Q
    |||||||| ||||||||  ||||||  |||||| | ||||||| ||||||||||| ||| ||||| ||| |  |||||| ||||||||||||    
T  22221868 ttaataatgaaattgcttagtagaagctaaatatagtcctcgtggaaacgaatttattactacttcgatagcttttggtacacttgccaaat 22221959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 22247606 - 22247794
Alignment:
Q  1 tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttt 100  Q
    ||||| ||||||||||||||  ||  ||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  22247606 tcaattttctaaaaaccaattctttattgtttttaattagtttat--tactaaatcaactcaactgcctagggcaccaataataattt-atacatccttt 22247702  T
Q  101 ttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaattt-ttattacttggattgaatttggttcacttgccaaat 191  Q
    |||||||| ||||||||  ||||||  |||||| | ||||||| ||||||||||| ||| ||||| ||| |  |||||| ||||||||||||    
T  22247703 ttaataatgaaattgcttagtagaagctaaatatagtcctcgtggaaacgaatttattactacttcgatagcttttggtacacttgccaaat 22247794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 30978400 - 30978322
Alignment:
Q  10 taaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattt 88  Q
    |||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30978400 taaaaaccaattctttattgtttttaatcagtttatgttactaaatcaactcaactgcctagggcaccaatataaattt 30978322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 14790704 - 14790864
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatc 138  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||    
T  14790704 gtttatgttacaaaa-caactcaactgcctagggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtc 14790801  T
Q  139 ctcgtagaaacgaa--tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||| || |||||  || ||| ||||| ||| |  |||||| ||||||||||||||| ||||    
T  14790802 ctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaaatatctatca 14790864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 14795732 - 14795892
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatc 138  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||    
T  14795732 gtttatgttacaaaa-caactcaactgcctagggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtc 14795829  T
Q  139 ctcgtagaaacgaa--tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    |||||||  |||||  || ||| ||||| ||| |  |||||| ||||||||||||||| ||||    
T  14795830 ctcgtaggtacgaactttattactacttcgatagcttttggtacacttgccaaatatctatca 14795892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 15535114 - 15535177
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggca 75  Q
    |||||||| ||||  ||||||||||||  ||| | |||||||||||||||||||||||||||||    
T  15535114 aaaaccaaacttttattgtttttaatctatttgttttacaaaatcaactcaactgcctagggca 15535177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 16883733 - 16883795
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttac-aaaatcaactcaactgcctaggg 73  Q
    |||||||||||||  |||||||||||  ||||||||||| |||||||| ||||||||||||||    
T  16883733 aaaaccaatcttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctaggg 16883795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 11184028 - 11183962
Alignment:
Q  7 ttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaa-tcaactcaactgcctaggg 73  Q
    ||||||||||||| ||||  ||||||||| |  ||||||||||||||| |||||||||||||||||||    
T  11184028 ttctaaaaaccaa-cttttattgtttttattacgtttatgttacaaaaatcaactcaactgcctaggg 11183962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 15540643 - 15540689
Alignment:
Q  27 ttgtttttaatcagtttatgttacaaaatcaactcaactgcctaggg 73  Q
    ||||||||||||  ||||| ||| |||||||||||||||||||||||    
T  15540643 ttgtttttaatccctttattttagaaaatcaactcaactgcctaggg 15540689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 2e-58; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 12172045 - 12172218
Alignment:
Q  27 ttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaat 126  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||     
T  12172045 ttgtttttaatcagtttatgttactaaatcaactcaactgcctagggcaccaatataaa-tttatacatcctttttaataatgaaattgctaagtagaag 12172143  T
Q  127 ttaaatacaatcctcgtagaaacga--atttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||||||| ||||||| |||||||   |||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  12172144 ttaaatacagtcctcgtggaaacgatcttttttattacttcgatcgaatttggttcacttgccaaatatctatca 12172218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 2541956 - 2542128
Alignment:
Q  27 ttgtttttaatcagtttatgttacaa-aatcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataaaattgctacgtagaa 125  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||||||| |   ||||| ||||||||||||||||||| ||||||||  ||||||    
T  2541956 ttgtttttaatccgtttatgttacaagaataaactcaactgcctagggcaccattg--aatttaatacatcctttttaataatgaaattgctcagtagaa 2542053  T
Q  126 tttaaatacaatcctcgtagaaacgaatt-tttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
     ||||||||| ||||||| || ||||||| |||||||||| |||||| |||||| ||||||||||||||| ||||    
T  2542054 gttaaatacagtcctcgtggatacgaattatttattacttcgattgactttggtacacttgccaaatatctatca 2542128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 647363 - 647288
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggcac-caatataaattttatacatcctttttaataataaaattgc 116  Q
    ||||||||||||||| |||||||| |||||||||||  |||||||||||| ||||||||||||| ||||  |||||||    
T  647363 gtttatgttacaaaa-caactcaaatgcctagggcaatcaatataaattt-atacatcctttttgataaagaaattgc 647288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 102; Significance: 4e-50; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 9910 - 10101
Alignment:
Q  1 tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttt 100  Q
    ||||| ||||||||||||||  ||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  9910 tcaattttctaaaaaccaattatttattgtttttaatcagtttatgttactaaatcaactcaactgcctaggggaccaatataaa-tttatacatccttt 10008  T
Q  101 ttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaat--ttttattacttggattgaatttggttcacttgccaaat 191  Q
    |||||||| ||||||||| |||||| ||||||||| |||  |  |||||||||  ||||||||||| ||| ||||||| ||||||||||||||    
T  10009 ttaataatgaaattgctaagtagaagttaaatacagtccctgaggaaacgaattcttttattacttcgatcgaatttgattcacttgccaaat 10101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 12575487 - 12575306
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttacaaaa-tcaactcaactgcctagggcaccaatataaattttatacatcctttttaataataa 110  Q
    |||||||||||||  ||||||||||||| |||||||||||||| |||||||||||||||||||||||| |   ||||| ||||||||||||||||||| |    
T  12575487 aaaaccaatcttttattgtttttaatcaatttatgttacaaaaatcaactcaactgcctagggcaccattg--aatttaatacatcctttttaataatga 12575390  T
Q  111 aattgctacgtagaatttaaatacaatcctcgtagaaacgaatt-tttattacttggattgaatttggttcacttgccaaatat 193  Q
    | ||| |  |||||| ||||  ||| ||||||| || ||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  12575389 acttgttgagtagaagttaacaacagtcctcgtggatacgaattatttattacttcgattgaatttggtacacttgccaaatat 12575306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 41778925 - 41778864
Alignment:
Q  17 caatctttctttgtttttaatcagtttatgttacaaaa-tcaactcaactgcctagggcacc 77  Q
    ||||||||  |||||||||||  ||||||||||||||| |||| ||||||||||||||||||    
T  41778925 caatcttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctagggcacc 41778864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 2e-36; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 589 - 871
Target Start/End: Original strand, 18117804 - 18118086
Alignment:
Q  589 aatgcccatttcacaaacaaatacaaatagctctcttgcgaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactac 688  Q
    ||||||||||||||||||||| | ||| || | ||    ||||| ||||  |||| ||| || |||||| |||||||||| || ||||||||||| || |    
T  18117804 aatgcccatttcacaaacaaagataaacagttttcaatagaaaggccttttaaaacataggagggaacagtacccatcatcgatgcaattgagttgctgc 18117903  T
Q  689 gtgtcgtcactatgactttactttcttctccaccaactttgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggac 788  Q
    |||| ||| | |||||||| ||| || ||   |||||||| ||||||| |  |||||| ||||||||| |||  ||||||||||||||||||||||  ||    
T  18117904 gtgttgtcgccatgactttgcttcctactgtgccaactttaatcaaatctttcaactcgatccattttacacaatcatcattccatatatcatctaacac 18118003  T
Q  789 gaggataaacttttgaccagaaagtttatgtcttagacgaatttgtagttgctcaatatcaaaatggttaatgtcttcttggt 871  Q
     || | |||| ||| |||| |||||||| |||| |||||| ||||||| |||||||||||||||||||| |||| ||||||||    
T  18118004 aagtaaaaaccttttaccataaagtttacgtctcagacgactttgtagctgctcaatatcaaaatggtttatgttttcttggt 18118086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 204 - 514
Target Start/End: Original strand, 18125078 - 18125383
Alignment:
Q  204 aatatattctattgcaatattctctagcttttcacttccattcaaggattgaaccaatccaagagctatccacagacaagtaatttcaacaatagaaaat 303  Q
    |||||||||| ||||||||| |||||| ||||||||||| |||  || |||||| |||||||| |||| ||| |||  | |||| || | | || | ||     
T  18125078 aatatattctcttgcaatatcctctagtttttcacttccgttccggggttgaactaatccaagggctacccaaagagcaataatatccaaactacagaaa 18125177  T
Q  304 gaataatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctt 403  Q
    | |  |||||| ||||| | ||| ||||||||||| || ||||| ||||||||||||||||  |||||||| ||||||| |||||||||||||||| |||    
T  18125178 gtaatatctttaggataaagggagaaataagcaaagcattgccttaaataggatggcatttggtcatagctcaattttagtgcaggtaaaatatcatctt 18125277  T
Q  404 tcttttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaatttaaatcaaattttgagaatagagaacttcctaatgttttgaca 503  Q
    | |  |||| ||| ||||| | ||||   |||||||| ||||||||     |  |||||||||||||||||||||||| ||||||||||||||| | |||    
T  18125278 tttgctgttttaaattccacagctcagaatctcttacaaatatcca-----tgtatttaaatcaaattttgagaatagggaacttcctaatgttctaaca 18125372  T
Q  504 gccagcggaac 514  Q
    || || |||||    
T  18125373 gctagtggaac 18125383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 309 - 438
Target Start/End: Original strand, 18117530 - 18117659
Alignment:
Q  309 atctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttcttt 408  Q
    ||||||||||||||  | ||  |||||||| || ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||  || ||||    
T  18117530 atctttgggatacatagcaatgtaagcaaagcagtgccttaaataggatggcattttatcatagcttaattttagtgcaggtaaaatatcattttgcttt 18117629  T
Q  409 tgttctaagttccaaatctcatggtctctt 438  Q
    ||||||||  |||| ||||||  |||||||    
T  18117630 tgttctaaagtccacatctcagagtctctt 18117659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 628 - 805
Target Start/End: Original strand, 18125496 - 18125673
Alignment:
Q  628 gaaagaccttccaaaatatacgaaggaacaatacccatcatggaagcaattgagttactacgtgtcgtcactatgactttactttcttctccaccaactt 727  Q
    |||||||||| ||||| ||| || |||||| |||||||||| ||||||||||||||| ||||||| ||||| || | ||| ||| ||  |   |||||||    
T  18125496 gaaagaccttgcaaaacatatgagggaacattacccatcatcgaagcaattgagttattacgtgttgtcaccataattttgcttcctcttgtgccaactt 18125595  T
Q  728 tgatcaaatttaacaactcaatccattttgcacggtcatcattccatatatcatctaggacgaggataaacttttgac 805  Q
    | ||||||| |  |||||| ||||| |||||||| ||||||||||||| ||||||||  || || | |||||||||||    
T  18125596 ttatcaaatctttcaactcgatccactttgcacgatcatcattccatacatcatctaacacaagtaaaaacttttgac 18125673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 10765005 - 10765167
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatc 138  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||    
T  10765005 gtttatgttacaaaa-caactcaactgcctagggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtc 10765102  T
Q  139 ctcgtagaaacgaa--tttttattacttggattgaatttggttcacttgccaaatatccatcaca 201  Q
    ||||| || |||||  || ||| ||||| ||| |  |||||| ||||||||||||||| ||||||    
T  10765103 ctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaaatatctatcaca 10765167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 13493348 - 13493508
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggc-accaatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatc 138  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||| ||||  |||||||   |||||| ||||  ||  ||    
T  13493348 gtttatgttacaaaa-caactcaactgcctagggcaatcaatataaa-tttatacatcctttttgataaagaaattgccgagtagaaattaacaacggtc 13493445  T
Q  139 ctcgtagaaacgaa--tttttattacttggattgaatttggttcacttgccaaatatccatca 199  Q
    ||||| || |||||  || ||| ||||| ||| |  |||||| ||||||||||||||| ||||    
T  13493446 ctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaaatatctatca 13493508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 34066402 - 34066468
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttac-aaaatcaactcaactgcctagggcacc 77  Q
    |||||||||||||  |||||||||||  ||||||||||| |||||||| ||||||||||||||||||    
T  34066402 aaaaccaatcttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctagggcacc 34066468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 1936701 - 1936869
Alignment:
Q  29 gtttttaat-cagtttatgttacaa-aatcaactcaactgcctagggca-ccaatataaattttatacatcctttttaataataaaattgctacgtagaa 125  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||| || || || | ||||| ||||||| || ||| |||| ||||||| | ||||||    
T  1936701 gtttttaattcagtttatgatacaacaatcaactcaactgcctaggtcaacccat-tgaatttaatacatcgttattactaatgaaattgccaagtagaa 1936799  T
Q  126 tttaaatacaatcctcgtagaaacgaattttt-attacttggattgaatttggttcacttgccaaatatc 194  Q
     ||||  |   || | || |||| ||||| || ||||||| |||||||||||||||||||||||||||||    
T  1936800 gttaacaatggtcattgtggaaatgaattattcattacttcgattgaatttggttcacttgccaaatatc 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 8435289 - 8435358
Alignment:
Q  7 ttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaa-tcaactcaactgcctagggcac 76  Q
    ||||||||||||| ||||  ||||||||| |  ||||||||||||||| ||||||||||||||||||||||    
T  8435289 ttctaaaaaccaa-cttttattgtttttattatgtttatgttacaaaaatcaactcaactgcctagggcac 8435358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 191
Target Start/End: Original strand, 13496073 - 13496224
Alignment:
Q  40 gtttatgttacaaaatcaactcaactgcctagggcac-caatataaattttatacatcctttttaataataaaattgctacgtagaatttaaatacaatc 138  Q
    ||||||||||||||| ||| ||||||||||||| ||  |||||||||||| ||||||||||||| ||||  |||||||   |||||| ||||  ||  ||    
T  13496073 gtttatgttacaaaa-caattcaactgcctaggacaatcaatataaattt-atacatcctttttgataaagaaattgccgagtagaaattaacaacggtc 13496170  T
Q  139 ctcgtagaaacgaatt--tttattacttggattgaatttggttcacttgccaaat 191  Q
    ||||| || |||||||  |||||||||| ||| |  ||||||||||||| |||||    
T  13496171 ctcgtggatacgaatttatttattacttcgatag-ttttggttcacttgtcaaat 13496224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 16190365 - 16190299
Alignment:
Q  12 aaaaccaatctttctttgtttttaatcagtttatgttacaaa-atcaactcaactgcctagggcacca 78  Q
    ||||||||||||| || |||||||||  |||||||||||||| |||||||||| | ||||||||||||    
T  16190365 aaaaccaatctttatt-gtttttaattcgtttatgttacaaacatcaactcaatttcctagggcacca 16190299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 917 - 1008
Target Start/End: Original strand, 18118138 - 18118231
Alignment:
Q  917 agttgataattttgataataatgcgcctaatatcaaaatcattggagacacatcc--aaatcttcaattggaaaatatcatctatcctcttatc 1008  Q
    ||||||| ||||||||||| ||| || |||||| ||||| ||||||||||||  |  | ||||||||||| ||||  ||||| |||||||||||    
T  18118138 agttgattattttgataattatgtgcataatataaaaataattggagacacagactcacatcttcaattgaaaaaattcatcgatcctcttatc 18118231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 24381 - 24193
Alignment:
Q  1 tcaatcttctaaaaaccaatctttctttgtttttaatcagtttatgttacaaaatcaactcaactgcctagggcaccaatataaattttatacatccttt 100  Q
    ||||| ||||||||||||||  ||  |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  24381 tcaattttctaaaaaccaattctttattgtttttaatcagtttat--tactaaatcaactcaactgcctagggcaccaataataattt-atacatccttt 24285  T
Q  101 ttaataataaaattgctacgtagaatttaaatacaatcctcgtagaaacgaattt-ttattacttggattgaatttggttcacttgccaaat 191  Q
    |||||||| |||||| |  |||||| ||||||||| ||||||| ||||| ||||| ||| ||||| ||| |  |||||| ||||||||||||    
T  24284 ttaataatgaaattgttgagtagaagttaaatacagtcctcgtggaaacaaatttattactacttcgatagcttttggtacacttgccaaat 24193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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