View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16741_low_19 (Length: 451)

Name: NF16741_low_19
Description: NF16741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16741_low_19
NF16741_low_19
[»] scaffold0014 (2 HSPs)
scaffold0014 (17-242)||(87039-87264)
scaffold0014 (236-297)||(82172-82232)
[»] chr8 (44 HSPs)
chr8 (319-442)||(32333114-32333237)
chr8 (314-442)||(6602523-6602651)
chr8 (314-442)||(6677976-6678104)
chr8 (319-442)||(1345-1468)
chr8 (319-442)||(28817256-28817379)
chr8 (319-442)||(35779502-35779625)
chr8 (318-442)||(1078653-1078777)
chr8 (319-442)||(70528-70651)
chr8 (319-442)||(7792661-7792784)
chr8 (319-442)||(7813322-7813445)
chr8 (319-442)||(42192644-42192767)
chr8 (319-442)||(9292018-9292141)
chr8 (317-442)||(10963247-10963370)
chr8 (337-442)||(42885192-42885297)
chr8 (319-442)||(4530987-4531110)
chr8 (323-442)||(39303313-39303433)
chr8 (319-438)||(3822396-3822515)
chr8 (319-442)||(6099572-6099695)
chr8 (347-442)||(31532130-31532225)
chr8 (319-442)||(40911221-40911343)
chr8 (319-442)||(12534725-12534846)
chr8 (318-442)||(39435281-39435405)
chr8 (344-440)||(5385363-5385459)
chr8 (319-438)||(45264649-45264767)
chr8 (319-419)||(18386708-18386808)
chr8 (319-442)||(31695274-31695397)
chr8 (319-442)||(31969725-31969848)
chr8 (319-442)||(41849237-41849359)
chr8 (319-425)||(41753002-41753108)
chr8 (323-440)||(18752345-18752462)
chr8 (319-442)||(29425357-29425474)
chr8 (380-442)||(13891151-13891213)
chr8 (396-442)||(20269607-20269653)
chr8 (396-442)||(21056236-21056282)
chr8 (334-442)||(7403700-7403807)
chr8 (380-442)||(9775047-9775109)
chr8 (319-405)||(22979604-22979690)
chr8 (320-442)||(40932710-40932832)
chr8 (62-115)||(9830015-9830068)
chr8 (360-438)||(33731473-33731551)
chr8 (382-440)||(44124089-44124147)
chr8 (318-375)||(20269541-20269598)
chr8 (318-375)||(21056170-21056227)
chr8 (350-399)||(22203731-22203780)
[»] chr1 (41 HSPs)
chr1 (319-442)||(28455874-28455997)
chr1 (319-441)||(41761417-41761539)
chr1 (319-442)||(32007074-32007197)
chr1 (319-442)||(48660022-48660145)
chr1 (318-442)||(41808201-41808325)
chr1 (319-442)||(5055793-5055916)
chr1 (326-440)||(39276357-39276471)
chr1 (319-442)||(45813016-45813139)
chr1 (320-442)||(35945798-35945920)
chr1 (319-442)||(50106201-50106324)
chr1 (319-442)||(20748-20871)
chr1 (319-442)||(29994388-29994511)
chr1 (319-442)||(192415-192538)
chr1 (320-442)||(5943682-5943804)
chr1 (319-441)||(11688263-11688385)
chr1 (319-442)||(46447378-46447505)
chr1 (322-411)||(29587255-29587344)
chr1 (375-442)||(41039308-41039375)
chr1 (344-442)||(7059492-7059590)
chr1 (317-442)||(26032796-26032924)
chr1 (321-442)||(21938944-21939065)
chr1 (335-442)||(7275697-7275804)
chr1 (318-442)||(2088910-2089034)
chr1 (319-442)||(4065961-4066084)
chr1 (319-442)||(49783707-49783830)
chr1 (319-442)||(13109770-13109893)
chr1 (320-434)||(38817212-38817326)
chr1 (381-442)||(3716424-3716485)
chr1 (322-442)||(778578-778697)
chr1 (382-442)||(26264541-26264601)
chr1 (319-442)||(32982355-32982478)
chr1 (319-442)||(39284290-39284413)
chr1 (373-442)||(35110104-35110173)
chr1 (354-442)||(13097339-13097427)
chr1 (334-409)||(35224355-35224430)
chr1 (397-442)||(25931162-25931207)
chr1 (319-387)||(45294658-45294726)
chr1 (393-423)||(16770180-16770210)
chr1 (318-376)||(34305708-34305766)
chr1 (319-360)||(34121643-34121684)
chr1 (394-442)||(13183181-13183229)
[»] chr5 (29 HSPs)
chr5 (320-442)||(4824944-4825066)
chr5 (319-442)||(13203957-13204080)
chr5 (319-442)||(21018223-21018346)
chr5 (319-442)||(2970984-2971107)
chr5 (319-442)||(35317702-35317825)
chr5 (319-442)||(1191545-1191668)
chr5 (319-442)||(12257356-12257479)
chr5 (319-442)||(29265875-29265998)
chr5 (322-442)||(6020995-6021115)
chr5 (319-442)||(40177624-40177747)
chr5 (319-438)||(27721431-27721550)
chr5 (351-442)||(31909390-31909481)
chr5 (317-442)||(21112047-21112172)
chr5 (323-442)||(8734000-8734120)
chr5 (319-442)||(11124652-11124775)
chr5 (319-442)||(32143419-32143530)
chr5 (319-438)||(3386902-3387028)
chr5 (320-442)||(17984747-17984869)
chr5 (318-423)||(9576985-9577090)
chr5 (322-442)||(28591355-28591475)
chr5 (338-442)||(23262567-23262667)
chr5 (318-442)||(2786270-2786393)
chr5 (318-385)||(30127893-30127960)
chr5 (320-421)||(2755925-2756027)
chr5 (380-442)||(41580080-41580142)
chr5 (330-442)||(14270535-14270647)
chr5 (319-442)||(35545933-35546056)
chr5 (328-407)||(3049094-3049173)
chr5 (319-374)||(38955228-38955283)
[»] chr2 (45 HSPs)
chr2 (318-442)||(26605623-26605747)
chr2 (319-442)||(10639611-10639734)
chr2 (319-442)||(19537307-19537430)
chr2 (319-442)||(33083559-33083682)
chr2 (319-442)||(11459715-11459838)
chr2 (319-442)||(11708678-11708801)
chr2 (319-442)||(34460369-34460492)
chr2 (319-442)||(23839859-23839982)
chr2 (319-442)||(29659223-29659346)
chr2 (335-442)||(37197615-37197722)
chr2 (319-442)||(45125170-45125293)
chr2 (319-442)||(19048754-19048877)
chr2 (319-442)||(19816220-19816343)
chr2 (319-442)||(39535539-39535662)
chr2 (323-442)||(11816555-11816675)
chr2 (319-442)||(39831449-39831571)
chr2 (319-441)||(4851320-4851442)
chr2 (319-442)||(7275891-7276015)
chr2 (322-442)||(16654366-16654486)
chr2 (319-438)||(40786218-40786337)
chr2 (318-442)||(15782589-15782712)
chr2 (318-442)||(27137923-27138046)
chr2 (319-442)||(34234530-34234651)
chr2 (350-442)||(43778473-43778565)
chr2 (323-442)||(43684073-43684192)
chr2 (318-442)||(42578179-42578291)
chr2 (322-442)||(4800879-4800999)
chr2 (322-442)||(38440202-38440322)
chr2 (319-442)||(7349098-7349221)
chr2 (323-442)||(42025674-42025794)
chr2 (344-432)||(33564924-33565010)
chr2 (373-442)||(40825163-40825232)
chr2 (319-416)||(45201903-45202000)
chr2 (323-391)||(25501839-25501907)
chr2 (325-442)||(21312211-21312326)
chr2 (322-442)||(33001706-33001825)
chr2 (382-442)||(44181892-44181952)
chr2 (71-132)||(18851556-18851617)
chr2 (322-442)||(34093240-34093361)
chr2 (336-417)||(38400486-38400567)
chr2 (322-442)||(20497595-20497715)
chr2 (323-390)||(23497569-23497637)
chr2 (322-370)||(32844654-32844702)
chr2 (320-440)||(34239827-34239947)
chr2 (319-358)||(13106356-13106395)
[»] scaffold0032 (1 HSPs)
scaffold0032 (319-442)||(56481-56604)
[»] chr7 (54 HSPs)
chr7 (319-442)||(2146636-2146759)
chr7 (319-442)||(44083940-44084063)
chr7 (318-442)||(4106737-4106861)
chr7 (319-442)||(23358185-23358308)
chr7 (319-442)||(31770537-31770660)
chr7 (319-442)||(40058238-40058361)
chr7 (319-442)||(25546280-25546403)
chr7 (322-442)||(8439081-8439201)
chr7 (335-442)||(4107325-4107432)
chr7 (319-442)||(25112252-25112375)
chr7 (320-442)||(47250256-47250378)
chr7 (319-442)||(7162795-7162916)
chr7 (323-442)||(43753758-43753878)
chr7 (325-440)||(27229484-27229600)
chr7 (350-442)||(47570723-47570815)
chr7 (319-440)||(5772826-5772947)
chr7 (319-442)||(27915585-27915709)
chr7 (319-442)||(11355823-11355946)
chr7 (319-442)||(38033729-38033852)
chr7 (351-442)||(38781213-38781304)
chr7 (319-442)||(47557781-47557904)
chr7 (320-442)||(48146754-48146876)
chr7 (318-442)||(4001849-4001971)
chr7 (337-442)||(41183833-41183938)
chr7 (319-440)||(43203306-43203427)
chr7 (350-442)||(39513988-39514080)
chr7 (319-442)||(15634884-15635007)
chr7 (335-442)||(28603027-28603134)
chr7 (319-442)||(32606335-32606458)
chr7 (319-442)||(43170944-43171067)
chr7 (326-440)||(29484762-29484876)
chr7 (320-442)||(42081624-42081743)
chr7 (318-437)||(34763453-34763560)
chr7 (319-442)||(48444157-48444280)
chr7 (330-442)||(5587291-5587403)
chr7 (330-442)||(5592252-5592364)
chr7 (322-432)||(13887174-13887282)
chr7 (320-442)||(23036210-23036330)
chr7 (352-442)||(5462955-5463045)
chr7 (397-442)||(19630673-19630718)
chr7 (319-434)||(10220485-10220600)
chr7 (319-442)||(25872763-25872886)
chr7 (319-442)||(28110936-28111059)
chr7 (372-442)||(35577881-35577951)
chr7 (319-440)||(29255717-29255836)
chr7 (318-442)||(18506281-18506404)
chr7 (319-430)||(25503950-25504059)
chr7 (319-427)||(47960975-47961083)
chr7 (319-397)||(40642974-40643052)
chr7 (318-423)||(46427359-46427464)
chr7 (351-442)||(35309886-35309977)
chr7 (319-441)||(7298131-7298253)
chr7 (396-442)||(31288229-31288275)
chr7 (319-440)||(25049965-25050086)
[»] chr4 (52 HSPs)
chr4 (319-442)||(28798393-28798516)
chr4 (318-442)||(45874054-45874178)
chr4 (319-442)||(19849508-19849631)
chr4 (319-442)||(34739280-34739403)
chr4 (319-442)||(1173951-1174074)
chr4 (319-442)||(43139911-43140034)
chr4 (319-442)||(26424863-26424985)
chr4 (319-442)||(53457824-53457947)
chr4 (317-442)||(54768437-54768562)
chr4 (322-442)||(22607988-22608108)
chr4 (319-442)||(18257329-18257452)
chr4 (327-442)||(23417488-23417603)
chr4 (319-442)||(12735431-12735554)
chr4 (319-442)||(23710338-23710461)
chr4 (319-441)||(238464-238586)
chr4 (319-440)||(19673936-19674057)
chr4 (319-442)||(55214652-55214775)
chr4 (319-442)||(12867841-12867964)
chr4 (323-442)||(29581049-29581167)
chr4 (319-442)||(55400228-55400351)
chr4 (321-442)||(19225261-19225382)
chr4 (318-437)||(37134047-37134166)
chr4 (319-442)||(11277982-11278101)
chr4 (340-438)||(39807865-39807963)
chr4 (319-412)||(32441119-32441212)
chr4 (318-442)||(2864753-2864877)
chr4 (319-442)||(12767087-12767210)
chr4 (322-442)||(19814108-19814228)
chr4 (322-409)||(3465755-3465842)
chr4 (335-440)||(50033397-50033503)
chr4 (319-435)||(22910269-22910385)
chr4 (319-435)||(22968137-22968253)
chr4 (351-438)||(24417887-24417974)
chr4 (351-445)||(24517985-24518079)
chr4 (344-432)||(49030754-49030841)
chr4 (319-434)||(32778125-32778238)
chr4 (380-442)||(1966611-1966673)
chr4 (332-442)||(16555320-16555430)
chr4 (396-440)||(48822890-48822934)
chr4 (319-370)||(19119144-19119195)
chr4 (319-442)||(31014982-31015105)
chr4 (326-437)||(52172000-52172111)
chr4 (352-442)||(516461-516551)
chr4 (380-426)||(2075566-2075612)
chr4 (380-442)||(33770629-33770691)
chr4 (396-434)||(52768313-52768351)
chr4 (385-442)||(1125953-1126010)
chr4 (380-441)||(37620678-37620739)
chr4 (397-440)||(52016080-52016123)
chr4 (382-440)||(50035955-50036013)
chr4 (397-438)||(23532125-23532166)
chr4 (386-442)||(51287668-51287725)
[»] scaffold0119 (2 HSPs)
scaffold0119 (310-442)||(13956-14088)
scaffold0119 (310-442)||(19636-19768)
[»] scaffold1348 (1 HSPs)
scaffold1348 (319-442)||(867-990)
[»] chr6 (31 HSPs)
chr6 (317-440)||(33704214-33704337)
chr6 (319-442)||(33621494-33621617)
chr6 (319-442)||(21037291-21037413)
chr6 (319-442)||(4464127-4464250)
chr6 (319-442)||(28322932-28323055)
chr6 (319-442)||(21000692-21000815)
chr6 (319-442)||(2959149-2959272)
chr6 (319-421)||(11572008-11572110)
chr6 (318-440)||(12252022-12252144)
chr6 (319-442)||(35218645-35218756)
chr6 (319-442)||(24619084-24619207)
chr6 (318-442)||(29009655-29009779)
chr6 (319-442)||(361011-361134)
chr6 (351-442)||(19145503-19145593)
chr6 (319-441)||(32289348-32289467)
chr6 (352-442)||(16518456-16518544)
chr6 (319-423)||(3057402-3057502)
chr6 (387-434)||(28592141-28592188)
chr6 (324-440)||(7613308-7613425)
chr6 (319-439)||(10999416-10999536)
chr6 (359-434)||(32353954-32354028)
chr6 (335-440)||(5598782-5598887)
chr6 (318-399)||(10226540-10226621)
chr6 (366-417)||(17590392-17590443)
chr6 (319-378)||(28592185-28592244)
chr6 (372-438)||(22576234-22576300)
chr6 (319-409)||(33255489-33255578)
chr6 (335-440)||(584791-584895)
chr6 (319-437)||(7487278-7487392)
chr6 (360-405)||(33688206-33688251)
chr6 (382-442)||(7014315-7014375)
[»] chr3 (42 HSPs)
chr3 (319-442)||(7824459-7824582)
chr3 (319-442)||(29689487-29689610)
chr3 (319-442)||(43247655-43247778)
chr3 (319-441)||(55018040-55018162)
chr3 (317-442)||(54151686-54151811)
chr3 (319-442)||(54158266-54158389)
chr3 (319-442)||(4601425-4601548)
chr3 (319-442)||(51665930-51666053)
chr3 (317-442)||(1778849-1778974)
chr3 (335-442)||(36228999-36229106)
chr3 (319-442)||(52500838-52500961)
chr3 (332-442)||(9349681-9349791)
chr3 (319-442)||(28844504-28844628)
chr3 (335-442)||(3113000-3113107)
chr3 (319-422)||(35461504-35461607)
chr3 (319-442)||(42392810-42392933)
chr3 (319-440)||(33334608-33334729)
chr3 (319-440)||(32001431-32001552)
chr3 (308-442)||(47635010-47635144)
chr3 (318-442)||(41377583-41377702)
chr3 (318-442)||(7958568-7958692)
chr3 (346-442)||(38257308-38257404)
chr3 (319-442)||(29750621-29750743)
chr3 (317-442)||(40756732-40756858)
chr3 (325-442)||(475286-475402)
chr3 (342-442)||(8151371-8151471)
chr3 (319-442)||(28458663-28458785)
chr3 (335-442)||(43775239-43775346)
chr3 (319-442)||(50729524-50729647)
chr3 (319-442)||(50783202-50783325)
chr3 (320-437)||(15863700-15863817)
chr3 (393-442)||(55320405-55320454)
chr3 (323-442)||(47770329-47770446)
chr3 (335-438)||(448884-448987)
chr3 (323-418)||(51112493-51112588)
chr3 (320-442)||(51054702-51054824)
chr3 (319-406)||(31255406-31255493)
chr3 (320-442)||(2590815-2590928)
chr3 (335-445)||(27230683-27230792)
chr3 (352-442)||(8137638-8137726)
chr3 (336-442)||(53182750-53182856)
chr3 (322-378)||(45686096-45686152)
[»] scaffold0044 (1 HSPs)
scaffold0044 (319-442)||(9978-10101)
[»] scaffold0038 (1 HSPs)
scaffold0038 (319-442)||(114252-114375)
[»] scaffold0053 (1 HSPs)
scaffold0053 (330-442)||(22174-22286)
[»] scaffold0352 (1 HSPs)
scaffold0352 (319-442)||(8948-9071)
[»] scaffold0067 (1 HSPs)
scaffold0067 (323-442)||(34822-34942)
[»] scaffold0360 (1 HSPs)
scaffold0360 (319-402)||(14495-14578)
[»] scaffold0495 (1 HSPs)
scaffold0495 (318-399)||(3259-3340)


Alignment Details
Target: scaffold0014 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 87264 - 87039
Alignment:
Q  17 aaatcaccctaataaccaggccactacgtggtcgtgttgtacatattacaaggatatcaaagtgatttcttggggtgtagtcactatggacatttcggta 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  87264 aaatcaccctaataaccaggtcactacgtggtcgtgttgtacatattacaaggatatcaaagtgatttcttggggtgtagtcattatggacatttcggta 87165  T
Q  117 aagcaaaataggacaaggaacgaataactgcagggaatcaattactatccattatgcggcgcgtgctacaagccatgcatcacgcaggaagaagggaaat 216  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  87164 aagcagaataggacaaggaatgaataactgcagggaatcaattactatccattacgctgtgcgtgctacaagccatgcatcacgcaggaagaagggaaat 87065  T
Q  217 agagggatcagctaccgtccattatg 242  Q
    |||| |||||||||||||||||||||    
T  87064 agagtgatcagctaccgtccattatg 87039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 82232 - 82172
Alignment:
Q  236 cattatgcgacatgggctacaaagctacacatctggcgacaacaatgaattgcaaccatcat 297  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  82232 cattatgcgacatgggcaacaa-gctacacatctggcgacaacaatgaattgcaaccatcat 82172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 3e-49; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 32333114 - 32333237
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  32333114 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 32333213  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  32333214 tttcagtggattaccacttcatct 32333237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 314 - 442
Target Start/End: Complemental strand, 6602651 - 6602523
Alignment:
Q  314 aactcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgag 413  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||||    
T  6602651 aactcgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgag 6602552  T
Q  414 tttattttcaatggattaccacttcatct 442  Q
    |||||||||| ||||||||||||||||||    
T  6602551 tttattttcagtggattaccacttcatct 6602523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 314 - 442
Target Start/End: Complemental strand, 6678104 - 6677976
Alignment:
Q  314 aactcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgag 413  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||||    
T  6678104 aactcgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgag 6678005  T
Q  414 tttattttcaatggattaccacttcatct 442  Q
    |||||||||| ||||||||||||||||||    
T  6678004 tttattttcagtggattaccacttcatct 6677976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 1468 - 1345
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1468 gtctagaagttctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccctggttcgaacccgggacctcacagttgtgtgtgagtttat 1369  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  1368 tttcagtggattaccacttcatct 1345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 28817256 - 28817379
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  28817256 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggatctcacagttgtgtgtgagtttat 28817355  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  28817356 tttcagtggattaccacttcatct 28817379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 35779625 - 35779502
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  35779625 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 35779526  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  35779525 tttcagtggattaccacttcatct 35779502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 1078777 - 1078653
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||| ||| |||||||||||||| |||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||||||||    
T  1078777 cgtctagaagtcgtagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccaggttcgaacccgggacctcacagttgtgtgtgagttta 1078678  T
Q  418 ttttcaatggattaccacttcatct 442  Q
    |||||| ||||||||||||||||||    
T  1078677 ttttcagtggattaccacttcatct 1078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 70651 - 70528
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||  |||||| |||| ||||||| ||||||||||||||||||||||||||    
T  70651 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggtttgaacccgggacctcacagttgtgtgtgagtttat 70552  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  70551 tttcagtggattaccacttcatct 70528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 7792661 - 7792784
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||| | |||||||||||| || |||||||||||||||||||||||    
T  7792661 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggctggacgttgtgactcgggttcgaacccgggatctcacagttgtgtgtgagtttat 7792760  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| |||||||| |||||||||    
T  7792761 tttcagtggattactacttcatct 7792784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 7813322 - 7813445
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| ||||| || |||||  ||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||||||||||    
T  7813322 gtctagaagtcctagctcaaccggcaaatgctgaaattgcaaggccggatgttgtgactcgggttcgaacccgggacctcacagttgtgtgtgagtttat 7813421  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  7813422 tttcagtggattaccacttcatct 7813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 42192767 - 42192644
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  ||||||  ||||||||||| || |||||||||||||||||||||||    
T  42192767 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgagttcgaacccgggatctcacagttgtgtgtgagtttat 42192668  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  42192667 tttcagtggattaccacttcatct 42192644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 9292018 - 9292141
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| |||||||||||||| || |||||||||||||||||   ||||||| || ||| ||||||||||||||||||||||    
T  9292018 gtctagaagtcctagctcaactggcaaatgtcgaaattgtaaagccggacgttgtgacccgaattcgaactcgggacttcacagttgtgtgtgagtttat 9292117  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  9292118 tttcagtggattaccacttcatct 9292141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 317 - 442
Target Start/End: Complemental strand, 10963370 - 10963247
Alignment:
Q  317 tcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttt 416  Q
    ||||||||||||||||| |||||||| ||||| ||||||| |||||||| ||||||||| || |||||||||||| |||||||||||||  |||||||||    
T  10963370 tcgtctagaagtcctagctcaactggcaaatgccgaaattacaaggccgaacgttgtgatccaggttcgaacccgggacctcacagttg--tgtgagttt 10963273  T
Q  417 attttcaatggattaccacttcatct 442  Q
    ||||||| ||||||||||||||||||    
T  10963272 attttcagtggattaccacttcatct 10963247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 337 - 442
Target Start/End: Original strand, 42885192 - 42885297
Alignment:
Q  337 aactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccact 436  Q
    |||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  42885192 aactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccact 42885291  T
Q  437 tcatct 442  Q
    ||||||    
T  42885292 tcatct 42885297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 4531110 - 4530987
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||| ||| ||||| |||||||||||||| ||||||  |||||| |||||||||||| |||||||||| ||||||||||||||     
T  4531110 gtctagaagtcctagctcaattggcaaatgccgaaattgcaaggctggacgtcatgacccgggttcgaacccgggacctcacagctgtgtgtgagtttaa 4531011  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  4531010 tttcagtggtttaccacttcatct 4530987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 39303313 - 39303433
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgag-tttatttt 421  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||  ||||   |||| ||||||||||||||||||||||||||||| |||| |||    
T  39303313 agaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacatgggtttgaacccgagacctcacagttgtgtgtgagttttaattt 39303412  T
Q  422 caatggattaccacttcatct 442  Q
    || ||||||||||||||||||    
T  39303413 cagtggattaccacttcatct 39303433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 319 - 438
Target Start/End: Original strand, 3822396 - 3822515
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| ||||||||||||| ||||| |||||||| |||| ||||||||||||||| |||||||||||  || ||||||||||||||||||||||     
T  3822396 gtctagaagttctagttcaactggcaaatgccgaaattgtaaggtcggacgttgtgacccgggttcgaacccaggatctcacagttgtgtgtgagtttaa 3822495  T
Q  419 tttcaatggattaccacttc 438  Q
    ||| | || |||||||||||    
T  3822496 ttttagtgaattaccacttc 3822515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 6099572 - 6099695
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||  ||||||  |||||||||||| |||||||| ||| | |||||||||     
T  6099572 gtctagaagtcctagttcaacttgcaaatgtcgaaattgcaaggccggacgtcatgacccgagttcgaacccgaaacctcacaattgcgcgtgagtttag 6099671  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||| | ||| ||||||||||||||    
T  6099672 ttttagtggtttaccacttcatct 6099695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 31532225 - 31532130
Alignment:
Q  347 tgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||||||||||||||||||||||||||||| | || ||||| | ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  31532225 tgtcgaaattgcaaggccggacgttgtgacccggatttgaaccggggacctcacagttgtgtgtgagtttaatttcagtggattaccacttcatct 31532130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 40911221 - 40911343
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||| ||||| ||||||||||||||||||||| ||||||| |||||||| ||| |||||||||  ||||||||||||||     
T  40911221 gtctagaagtgctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaa-ccgggacctcacaactgtgtgtgagtttaa 40911319  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  40911320 tttcagtggcttaccacttcatct 40911343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 12534846 - 12534725
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||||| |||| || |||||||||||  || ||||||||  || ||||||||||    
T  12534846 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccaggatctcacagt--tgcgtgagtttat 12534749  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| | ||||||||||||||||    
T  12534748 tttcagtagattaccacttcatct 12534725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 39435281 - 39435405
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    ||||||||||| |||| |||||||| ||||||| ||||||||||| |||||||  ||| |  ||||||||||||||||||||||||||||||||||||||    
T  39435281 cgtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatctgggttcgaacccgagacctcacagttgtgtgtgagttta 39435380  T
Q  418 ttttcaatggattaccacttcatct 442  Q
     |||   |||||||| |||||||||    
T  39435381 atttatgtggattacgacttcatct 39435405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 344 - 440
Target Start/End: Original strand, 5385363 - 5385459
Alignment:
Q  344 aaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcat 440  Q
    ||||| |||||||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||| ||  ||||||||||||    
T  5385363 aaatgccgaaattgcaaggctggacgtcgtgacccaggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcat 5385459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 438
Target Start/End: Complemental strand, 45264767 - 45264649
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||||| ||||| |||||||||| || || |||| ||||| | |||||||||||| |||||||||||| ||||||||||||     
T  45264767 gtctagaagtcctaactcaactggcaaatgccgaaattgca-ggtcgaacgtcgtgactcgggttcgaacccgggacctcacagttttgtgtgagtttaa 45264669  T
Q  419 tttcaatggattaccacttc 438  Q
    ||||| ||||||||||||||    
T  45264668 tttcagtggattaccacttc 45264649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 419
Target Start/End: Original strand, 18386708 - 18386808
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||  |||||  |||||||||||| |||| ||  |||| | |||||||||||| ||||||||||||||||||||||||||    
T  18386708 gtctagaagttctagctcaactgacaaatgctgaaattgcaaggtcggatgtcatgactcgggttcgaacccgggacctcacagttgtgtgtgagtttat 18386807  T
Q  419 t 419  Q
    |    
T  18386808 t 18386808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 31695397 - 31695274
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||| | ||||| |||||||||||  ||| ||  |||  | | |||||||| | ||||||||| |||||||||||||||     
T  31695397 gtctagaagttctagctcaactggcacatgtcaaaattgcaaggttggatgtcatgattcggattcgaacctgggacctcacaattgtgtgtgagtttaa 31695298  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||||||| ||||||||||||||    
T  31695297 tttcaatggtttaccacttcatct 31695274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 31969848 - 31969725
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||| | || ||| ||||| ||||||| ||||||| |||||  ||| || ||||||||| || ||||||| |||||||||||| ||||     
T  31969848 gtctagaagtcatagcttaattggcaaatgccgaaatttcaaggccagacgtcatgatccgggttcgaacacgggacctcaaagttgtgtgtgaatttaa 31969749  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  31969748 tttcagtggtttaccacttcatct 31969725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 41849359 - 41849237
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||| |||||| || ||||||||| ||||| ||||||||||||| ||||||| |||| |  |||||||| |||  ||||||| ||||||||||||||||     
T  41849359 gtctggaagtcttaattcaactggcaaatgccgaaattgcaaggtcggacgtcgtgatctgggttcgaatccggaacctcactgttgtgtgtgagtttaa 41849260  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| | |||||||| |||||||    
T  41849259 tttcagt-gattaccatttcatct 41849237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 41753108 - 41753002
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||  |||||||||||||||||| ||||| || |||| ||   ||||||||| | | ||||||||||||||| ||||||     
T  41753108 gtctagaagtcctagctcaactgacaaatgtcgaaattgcaagaccggatgtcgtgatccgaattcgaacccaaaatctcacagttgtgtgtaagtttaa 41753009  T
Q  419 tttcaat 425  Q
    |||||||    
T  41753008 tttcaat 41753002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 323 - 440
Target Start/End: Original strand, 18752345 - 18752462
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttc 422  Q
    |||||||||||||||||||  ||||  |||||||| |||| ||||||| |||| |  ||||||||||||  |||| ||||||||||||| ||||| ||||    
T  18752345 agaagtcctagttcaactgacaaataccgaaattgtaaggtcggacgtcgtgatcggggttcgaacccggaaccttacagttgtgtgtgggtttaatttc 18752444  T
Q  423 aatggattaccacttcat 440  Q
    | ||||||  ||||||||    
T  18752445 agtggattgacacttcat 18752462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 29425357 - 29425474
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||| ||| ||||| | |||||||||||||||||||  |||||| ||      |||| || ||| || |||||||||||||||     
T  29425357 gtctagaagtcctagctcaattggcaaatgccaaaattgcaaggccggacgtcatgacccggg------cccgggatctcgcaattgtgtgtgagtttaa 29425450  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  29425451 tttcagtggattaccacttcatct 29425474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 13891151 - 13891213
Alignment:
Q  380 ggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||   ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  13891151 ggttcgaacctaggacctcacagttgtgtgtgagtttattttcagtggtttaccacttcatct 13891213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 20269607 - 20269653
Alignment:
Q  396 ctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  20269607 ctcacagttgtgtgtgagtttattttcaatggattaccatttcatct 20269653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 21056236 - 21056282
Alignment:
Q  396 ctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  21056236 ctcacagttgtgtgtgagtttattttcaatggattaccatttcatct 21056282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 442
Target Start/End: Complemental strand, 7403807 - 7403700
Alignment:
Q  334 ttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacc 433  Q
    ||||||||  ||||||| |||||| |||| ||||||| ||||| |  ||||||| ||||||| |||||||||| |||||| ||| ||||| || ||||||    
T  7403807 ttcaactgccaaatgtcaaaattgtaaggtcggacgtcgtgactcgagttcgaatccgagacatcacagttgtttgtgagcttaatttcagtg-attacc 7403709  T
Q  434 acttcatct 442  Q
    |||||||||    
T  7403708 acttcatct 7403700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 9775109 - 9775047
Alignment:
Q  380 ggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||||  ||||||||||| |||||||||||| ||| |||||||||| |||||||||    
T  9775109 ggttcgaacccggaacctcacagttatgtgtgagtttaatttgaatggattacaacttcatct 9775047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 319 - 405
Target Start/End: Original strand, 22979604 - 22979690
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttg 405  Q
    ||||||||||||||| |||||||| ||||||||||||||||||  || |||| |||| ||  |||| || ||| |||||||||||||    
T  22979604 gtctagaagtcctagctcaactggcaaatgtcgaaattgcaagctcgaacgtcgtgatccaagttcaaagccgggacctcacagttg 22979690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 442
Target Start/End: Original strand, 40932710 - 40932832
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||||||| || || |||||  |||||||||||||| |||   |||||| |||| || | |||||| |||| | ||||||||||||||||| |||| |    
T  40932710 tctagaagtcataatttaactgacaaatgtcgaaattgtaagattggacgtcgtgatccggattcgaatccgaaatctcacagttgtgtgtgactttaat 40932809  T
Q  420 ttcaatggattaccacttcatct 442  Q
    || | | ||||||||||||||||    
T  40932810 tttagtagattaccacttcatct 40932832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 9830015 - 9830068
Alignment:
Q  62 ttacaaggatatcaaagtgatttcttggggtgtagtcactatggacatttcggt 115  Q
    ||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  9830015 ttacaagaatatcaaagtgttttcttggggtatagtcactacggacatttcggt 9830068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 33731551 - 33731473
Alignment:
Q  360 aggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttc 438  Q
    ||||| ||||| ||||||| ||||| ||| || |||||| |||||||||||||||||| ||| | ||| ||||||||||    
T  33731551 aggccagacgtcgtgacccgggttcaaactcgggacctcccagttgtgtgtgagtttaattttagtggtttaccacttc 33731473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 440
Target Start/End: Original strand, 44124089 - 44124147
Alignment:
Q  382 ttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcat 440  Q
    |||||||| ||||| |||||||||||||| |||||| ||||| || ||||| |||||||    
T  44124089 ttcgaacctgagacttcacagttgtgtgtaagtttaatttcattgaattactacttcat 44124147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 20269541 - 20269598
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtga 375  Q
    |||||| ||||| ||| |||||||| ||||  |||||||| |||||||||||||||||    
T  20269541 cgtctaaaagtcttagctcaactggcaaataccgaaattgtaaggccggacgttgtga 20269598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 21056170 - 21056227
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtga 375  Q
    |||||| ||||| ||| |||||||| ||||  |||||||| |||||||||||||||||    
T  21056170 cgtctaaaagtcttagctcaactggcaaataccgaaattgtaaggccggacgttgtga 21056227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 22203731 - 22203780
Alignment:
Q  350 cgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctca 399  Q
    ||||||||||||| | ||||| ||||||| |||||||| |||||||||||    
T  22203731 cgaaattgcaaggtcagacgtcgtgacccgggttcgaatccgagacctca 22203780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 28455874 - 28455997
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  28455874 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 28455973  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  28455974 tttcagtggattaccacttcatct 28455997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 319 - 441
Target Start/End: Complemental strand, 41761539 - 41761417
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  41761539 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtttat 41761440  T
Q  419 tttcaatggattaccacttcatc 441  Q
    ||||| |||||||||||||||||    
T  41761439 tttcagtggattaccacttcatc 41761417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 32007074 - 32007197
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  32007074 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 32007173  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  32007174 tttcagtggattaccacttcatct 32007197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 48660022 - 48660145
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||    
T  48660022 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttat 48660121  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  48660122 tttcagtggattaccacttcatct 48660145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 41808201 - 41808325
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| ||||||||||||  ||||||||||||||||||||||||    
T  41808201 cgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagttta 41808300  T
Q  418 ttttcaatggattaccacttcatct 442  Q
    |||||| ||||||||||||||||||    
T  41808301 ttttcagtggattaccacttcatct 41808325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 5055916 - 5055793
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| ||| |||| ||||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  5055916 gtctagaagtcctagctcagctggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 5055817  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  5055816 tttcagtggattaccacttcatct 5055793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 326 - 440
Target Start/End: Original strand, 39276357 - 39276471
Alignment:
Q  326 agtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaat 425  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| |    
T  39276357 agtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagt 39276456  T
Q  426 ggattaccacttcat 440  Q
    |||||||||||||||    
T  39276457 ggattaccacttcat 39276471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 45813139 - 45813016
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||  ||||| ||||||||||||| ||||| | ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  45813139 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggtcggacatcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 45813040  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  45813039 tttcagtggattaccacttcatct 45813016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 320 - 442
Target Start/End: Original strand, 35945798 - 35945920
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||||  ||||||||||||  ||||||||||||||||||| ||||||    
T  35945798 tctagaagtcctagctcaactggtaaatgccgaaattgtaaggctggacgttgtgacctgggttcgaacccggaacctcacagttgtgtgtgaatttatt 35945897  T
Q  420 ttcaatggattaccacttcatct 442  Q
    |||| ||||||||||||||||||    
T  35945898 ttcagtggattaccacttcatct 35945920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 50106324 - 50106201
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||||||| || ||||||||||||| || |||||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  50106324 gtctagaagtcctaatttaactggtaaatgttgagattgcaaggccgaacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttat 50106225  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| |||||| ||| |||||||    
T  50106224 tttcagtggattgccatttcatct 50106201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 20748 - 20871
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||| |||||  ||||||| | |||||||||| ||||||||||||||||||||||||||    
T  20748 gtctagaagtcctaactcaactggcaaatgccgaaattgcaaggcaggacgccgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttat 20847  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||| | ||||||||||||||||||    
T  20848 ttttagtggattaccacttcatct 20871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 29994511 - 29994388
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||| |||||  ||| || |||||||||||||||||||||| |||||||||||||||     
T  29994511 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccagacgtcatgatccgggttcgaacccgagacctcacaattgtgtgtgagtttaa 29994412  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  29994411 tttcagtggtttaccacttcatct 29994388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 192415 - 192538
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||  |||||   |||||||||||||||||||||||| ||  ||||||||||  ||||||||||||||||||||||||||    
T  192415 gtctagaagtcctagctcaactgacaaatgctaaaattgcaaggccggacgttgtgatccgtgttcgaacccaggacctcacagttgtgtgtgagtttat 192514  T
Q  419 tttcaatggattaccacttcatct 442  Q
    |||||  |||||||||||||||||    
T  192515 tttcagcggattaccacttcatct 192538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 320 - 442
Target Start/End: Original strand, 5943682 - 5943804
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    ||||||| |||||| |||||||  ||||| ||||||||||||||||||||| ||||||| ||||||||| |  |||||||||||||| |||||||||| |    
T  5943682 tctagaattcctagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaactcaggacctcacagttgtttgtgagtttaat 5943781  T
Q  420 ttcaatggattaccacttcatct 442  Q
    |||||||||||| ||||||||||    
T  5943782 ttcaatggattatcacttcatct 5943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 319 - 441
Target Start/End: Original strand, 11688263 - 11688385
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||  |||| ||||||||||||| ||| |||||||||||||||||||||  |  ||| ||| ||||||||||||||||||    
T  11688263 gtctagaagtcctagctcaactgacaaatatcgaaattgcaagcccgaacgttgtgaccctggttcgaattcaggacttcagagttgtgtgtgagtttat 11688362  T
Q  419 tttcaatggattaccacttcatc 441  Q
    ||||| |||||||||||||||||    
T  11688363 tttcagtggattaccacttcatc 11688385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 46447505 - 46447378
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagt---- 414  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||  ||||| || |||| |||||||||||| |||||||||||| |||||||||        
T  46447505 gtctagaagttctagttcaactggcaaatgccgaaattgcaaggctcgacgtcgtaacccgggttcgaacccgggacctcacagttatgtgtgagtttaa 46447406  T
Q  415 ttattttcaatggattaccacttcatct 442  Q
    ||||||||| ||||||||||| ||||||    
T  46447405 ttattttcagtggattaccacatcatct 46447378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 322 - 411
Target Start/End: Original strand, 29587255 - 29587344
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtg 411  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||||| ||||||  |||||||||||| ||||||||| |||||||||    
T  29587255 tagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacaattgtgtgtg 29587344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 375 - 442
Target Start/End: Complemental strand, 41039375 - 41039308
Alignment:
Q  375 accctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41039375 acccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 41039308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 442
Target Start/End: Original strand, 7059492 - 7059590
Alignment:
Q  344 aaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||| ||||||||||| | ||||| ||||||| |||||||| | ||||||||||||||||||||||||||| ||| | ||||||||||||| ||||    
T  7059492 aaatgtcaaaattgcaaggtcagacgtcgtgacccgggttcgaatctgagacctcacagttgtgtgtgagtttaatttaagtggattaccactttatct 7059590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 317 - 442
Target Start/End: Original strand, 26032796 - 26032924
Alignment:
Q  317 tcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccgg---acgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgag 413  Q
    |||||||||||||||| ||||||||  ||||| |||||||| |||| |||   |||| ||||||| |||||||||| |  ||||||||||| ||||||||    
T  26032796 tcgtctagaagtcctaattcaactgacaaatgccgaaattgtaaggtcggcggacgtcgtgacccgggttcgaacctggaacctcacagttttgtgtgag 26032895  T
Q  414 tttattttcaatggattaccacttcatct 442  Q
    |||| ||||| ||||||||| ||||||||    
T  26032896 tttaatttcagtggattaccgcttcatct 26032924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 321 - 442
Target Start/End: Original strand, 21938944 - 21939065
Alignment:
Q  321 ctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattt 420  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||||| ||  ||| || | |||||| ||  ||||||||||||||||| ||||||| ||    
T  21938944 ctagaagtcctagctcaactggtaaatgccgaaattgtaaggccggatgtcatgatccggattcgaatccaggacctcacagttgtgtgcgagtttaatt 21939043  T
Q  421 tcaatggattaccacttcatct 442  Q
    |||  || ||||||||||||||    
T  21939044 tcagcggtttaccacttcatct 21939065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 7275697 - 7275804
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||||| |||||||||||||| |||| |||||||| |||| | | ||||||||||  || |||||||||||| |||||||| ||||| ||| ||||||    
T  7275697 tcaactggcaaatgtcgaaattgtaaggtcggacgttatgactcggattcgaacccggaacttcacagttgtgtatgagtttaatttcagtggtttacca 7275796  T
Q  435 cttcatct 442  Q
    ||||||||    
T  7275797 cttcatct 7275804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 2089034 - 2088910
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||| |||||||| |||| ||||||||| |||| | ||| | ||||| | ||||||||| |   |||||||| |||| |||||||| |    
T  2089034 cgtctagaagtcctagctcaactggcaaatatcgaaattgtaaggtcagacatcgtgactcgggttcgaactcagaacctcacaattgtatgtgagttca 2088935  T
Q  418 ttttcaatggattaccacttcatct 442  Q
     ||||| ||||||||||||||||||    
T  2088934 atttcagtggattaccacttcatct 2088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 4065961 - 4066084
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||| ||||| |||||||  ||||  |||||||||||| | | ||||||||| || |||||||| | ||||||| ||| |||| ||||||||||     
T  4065961 gtctagaagacctagctcaactgacaaataccgaaattgcaagactgaacgttgtgatccgggttcgaatctgagaccttacaattgtatgtgagtttaa 4066060  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| || |||||||||||||||    
T  4066061 tttcagtgaattaccacttcatct 4066084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 49783707 - 49783830
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||| ||||||||  |||| ||| ||||||||||||||||||| || ||||  |||  | ||||||||||||  ||||||||||||| ||||| ||||     
T  49783707 gtctataagtcctaactcaattggcaaatgtcgaaattgcaaggtcgaacgtcatgattcgggttcgaacccggaacctcacagttgtatgtgaatttaa 49783806  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  49783807 tttcagtggtttaccacttcatct 49783830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 13109770 - 13109893
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| | |||||  |||||   ||||||||||| ||||||| || ||||   ||||||||    ||||||||||||||||||||||||     
T  13109770 gtctagaagttctagcttaactgacaaatgattaaattgcaaggtcggacgtcgtaacccgaattcgaacctagaacctcacagttgtgtgtgagtttaa 13109869  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  13109870 tttcagtggattaccacttcatct 13109893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 38817326 - 38817212
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||||| | ||||||| |||  ||||||||| |||| ||| |||||||| |||| ||  ||||||||||||||||||||| |||||||||| |||| |    
T  38817326 tctagaagacatagttcatctgacaaatgtcgatattgaaagaccggacgtcgtgatccgagttcgaacccgagacctcacaattgtgtgtgaatttaat 38817227  T
Q  420 ttcaatggattacca 434  Q
    || ||| | ||||||    
T  38817226 tttaattgtttacca 38817212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 3716424 - 3716485
Alignment:
Q  381 gttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||||||  ||||||||||    
T  3716424 gttcgaacctgagacctcacagttgtgtgtgagtttatttttagtggattgtcacttcatct 3716485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 778578 - 778697
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    ||||||| |||| |||||||| ||||| |||| || ||||| || |||| ||||| | ||||||||||   ||||| ||||||||||||||||||| |||    
T  778578 tagaagttctagctcaactggaaaatgccgaa-ttacaaggtcgaacgtcgtgactcaggttcgaacctaggacctgacagttgtgtgtgagtttaattt 778676  T
Q  422 caatggattaccacttcatct 442  Q
    || || ||||||| |||||||    
T  778677 cagtgaattaccaattcatct 778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 26264601 - 26264541
Alignment:
Q  382 ttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||||| || |||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  26264601 ttcgaacctgaaacctcacagttgtgtgtgagtttaatttcaatgtattatcacttcatct 26264541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 32982478 - 32982355
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||  || || ||||||   ||| |||| ||||  ||||||||||||||||||||      
T  32982478 gtctagaagtcctagctcaactgataaatgccgaaactgtaaggccaaactttatgacccgaattcaaacctgagaaatcacagttgtgtgtgagtttga 32982379  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| |||| |||||||||    
T  32982378 tttcagtggtttactacttcatct 32982355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 39284290 - 39284413
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||| |||||||   ||||| ||||||| |||| ||||||| ||||  | ||||||||||  ||||||||||||||| ||||||||||     
T  39284290 gtctagaagtcatagctcaactgacgaatgttgaaattgtaaggtcggacgtcgtgattcgggttcgaacctaagacctcacagttgtatgtgagtttaa 39284389  T
Q  419 tttcaatggattaccacttcatct 442  Q
    |||   |||||||| | |||||||    
T  39284390 tttttgtggattactatttcatct 39284413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 442
Target Start/End: Complemental strand, 35110173 - 35110104
Alignment:
Q  373 tgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||| |||||||||||  ||||| ||||||||||||||||||| ||| |  |||||||||||||||||    
T  35110173 tgacccgggttcgaacccaggaccttacagttgtgtgtgagtttaatttgagaggattaccacttcatct 35110104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 442
Target Start/End: Original strand, 13097339 - 13097427
Alignment:
Q  354 attgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||| ||||||| ||||||| | ||| ||||    ||||||||||||| |||||||||| ||| | ||||||||||||||||||    
T  13097339 attgcaaggtcggacgtcgtgacccggattcaaacctagaacctcacagttgtatgtgagtttaattttattggattaccacttcatct 13097427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 35224355 - 35224430
Alignment:
Q  334 ttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtg 409  Q
    ||||||||| |||||   ||| |||||||||||||||  |||||| |||||||||||  |||||||||||||||||    
T  35224355 ttcaactggcaaatgcgaaaaatgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtg 35224430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 25931207 - 25931162
Alignment:
Q  397 tcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  25931207 tcacaattgtgtgtgagtttaatttcaatagattaccacttcatct 25931162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 45294658 - 45294726
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaa 387  Q
    ||||||||||||||| |||||| | ||||| |||||||||||| |||||| |  |||||| ||||||||    
T  45294658 gtctagaagtcctagctcaactagcaaatgccgaaattgcaagaccggacatcatgacccgggttcgaa 45294726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 423
Target Start/End: Complemental strand, 16770210 - 16770180
Alignment:
Q  393 gacctcacagttgtgtgtgagtttattttca 423  Q
    |||||||||||||||||||||||||||||||    
T  16770210 gacctcacagttgtgtgtgagtttattttca 16770180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 34305766 - 34305708
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgac 376  Q
    |||||| ||||||||| ||||| | |||||||| ||||| ||||||||||||| |||||    
T  34305766 cgtctaaaagtcctagctcaaccgataaatgtcaaaatttcaaggccggacgtcgtgac 34305708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 34121684 - 34121643
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaa 360  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  34121684 gtcttgaagtcctaattcaactggcaaatgtcgaaattgcaa 34121643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 442
Target Start/End: Complemental strand, 13183229 - 13183181
Alignment:
Q  394 acctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||| |||||||| |||||||||| ||||| || |||||||||||||||    
T  13183229 accttacagttgtatgtgagtttaatttcagtgaattaccacttcatct 13183181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 4825066 - 4824944
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  4825066 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccaggttcaaacccgggacctcacagttgtgtgtgagtttatt 4824967  T
Q  420 ttcaatggattaccacttcatct 442  Q
    |||||||||||||||||||||||    
T  4824966 ttcaatggattaccacttcatct 4824944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 13203957 - 13204080
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||||    
T  13203957 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttat 13204056  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  13204057 tttcagtggattaccacttcatct 13204080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 21018223 - 21018346
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| | ||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  21018223 gtctagaagtcctagctcaactggcaaatgccaaaattgcgaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 21018322  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  21018323 tttcagtggattaccacttcatct 21018346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 2970984 - 2971107
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  2970984 gtctagaagtcctagctcaactgataaatgtcgaaattgtaaggtcagacgttgtgacccgggttcgaacctgagacctcacagttgtgtgtgagtttat 2971083  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||  ||||||||||||||||||    
T  2971084 tttcggtggattaccacttcatct 2971107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 35317825 - 35317702
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||| |||||  || ||||||||| ||||||||||||||||||||||||||    
T  35317825 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttatgacctggggtcgaacccgggacctcacagttgtgtgtgagtttat 35317726  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  35317725 tttcagtggattaccacttcatct 35317702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 1191668 - 1191545
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||||| |||| || |||||||||||| ||||||||| |||||||||||||||     
T  1191668 gtctagaagtcctagctcaactggcaaatgacgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacaattgtgtgtgagtttaa 1191569  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| |||| |||||||||    
T  1191568 tttcagtggcttacaacttcatct 1191545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 12257356 - 12257479
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||| |||||| ||||||||||||  |||||||||||  ||||||| | ||||||||||||||||    
T  12257356 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccagacgttgtgacctgggttcgaacccaggacctcataattgtgtgtgagtttat 12257455  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  12257456 tttcagtggattaccacttcatct 12257479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 29265875 - 29265998
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||| | ||||||||||||| ||||| || | |||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  29265875 gtctagaagtcctaactcaactagaaaatgtcgaaattacaaggtcgaatgttgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttat 29265974  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  29265975 tttcagtggattaccacttcatct 29265998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 6020995 - 6021115
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    |||||||||||  |||| ||| ||||||| ||||||||||||| ||||||||||||| | |||||||||| |||||| ||||||||||||||||||||||    
T  6020995 tagaagtcctaactcaattggcaaatgtcaaaattgcaaggcctgacgttgtgacccggattcgaacccgggacctctcagttgtgtgtgagtttatttt 6021094  T
Q  422 caatggattaccacttcatct 442  Q
    || ||||||||||||| ||||    
T  6021095 cagtggattaccactttatct 6021115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 40177624 - 40177747
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||  | ||| ||||||  || |||| |||||||||||||||||    
T  40177624 gtctagaagtcctagcttaactgacaaatgtcgaaattgcaaggccggacgttgtgacctggattccaacccggaacttcaccgttgtgtgtgagtttat 40177723  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  40177724 tttcagtggattaccacttcatct 40177747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 319 - 438
Target Start/End: Original strand, 27721431 - 27721550
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| | ||||||| ||||||| |||| ||||||| |||||||||||||| ||||| ||||     
T  27721431 gtctagaagtcctagctcaactggaaaatgccgaaattgcaaagtcggacgtcgtgacccgggtttgaacccgggacctcacagttgtatgtgaatttaa 27721530  T
Q  419 tttcaatggattaccacttc 438  Q
    ||||| ||||||||||||||    
T  27721531 tttcagtggattaccacttc 27721550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 31909481 - 31909390
Alignment:
Q  351 gaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||||||||||| |||||  |||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31909481 gaaattgcaaggccagacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 31909390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 317 - 442
Target Start/End: Original strand, 21112047 - 21112172
Alignment:
Q  317 tcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttt 416  Q
    ||||||||||||||||| ||| |||  ||||||||||||||||||| |  |||| ||||||  |||||||||| | ||||||| |||||||| |||||||    
T  21112047 tcgtctagaagtcctagctcagctgacaaatgtcgaaattgcaaggacatacgtcgtgacctaggttcgaacctgggacctcaaagttgtgtttgagttt 21112146  T
Q  417 attttcaatggattaccacttcatct 442  Q
    ||||||| ||||||||||| ||||||    
T  21112147 attttcagtggattaccacatcatct 21112172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 8734000 - 8734120
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgag-tttatttt 421  Q
    ||||||||||| |||||||| |||||  |||||||||||||||||||| ||||||  ||||||||||||  |||||||||||||  ||||| ||||  ||    
T  8734000 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccggaacctcacagttgtacgtgagttttaactt 8734099  T
Q  422 caatggattaccacttcatct 442  Q
    || ||||||||||||||||||    
T  8734100 cagtggattaccacttcatct 8734120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 11124652 - 11124775
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||| |||||| || |||||||||   |||||| | || | |||| |||||     
T  11124652 gtctagaagtcctagctcaactggcaaatgtcaaaattgcaaggccggacgtcgtgaccttgattcgaacccagaacctcataattttatgtgggtttaa 11124751  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||| | ||||||||||||||||||    
T  11124752 tttgagtggattaccacttcatct 11124775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 32143530 - 32143419
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||| |||||||| ||||| | ||||||||||||||||||||||||||| ||            |||||||||||||||||||||||||    
T  32143530 gtctagaagtcatagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccggg------------acctcacagttgtgtgtgagtttat 32143443  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  32143442 tttcagtggattaccacttcatct 32143419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 438
Target Start/End: Complemental strand, 3387028 - 3386902
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccg--ag-----acctcacagttgtgtgtg 411  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||||| || | || ||||||||||||  ||     |||||| |||||||||||    
T  3387028 gtctaaaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgttatccgggttcgaacccggaagtcggaacctcaaagttgtgtgtg 3386929  T
Q  412 agtttattttcaatggattaccacttc 438  Q
    | |||| ||||| ||||||||||||||    
T  3386928 aatttaatttcagtggattaccacttc 3386902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 17984869 - 17984747
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||||||||||| |||||||  ||| ||||||||||||||   ||||||  |||| | ||||||||||||  |||||||||||||||||||||||| |    
T  17984869 tctagaagtcctagctcaactgaaaaaggtcgaaattgcaagattggacgtcctgactcgggttcgaacccggaacctcacagttgtgtgtgagtttaat 17984770  T
Q  420 ttcaatggattaccacttcatct 442  Q
    || | ||| ||| ||||||||||    
T  17984769 tttagtggcttatcacttcatct 17984747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 423
Target Start/End: Complemental strand, 9577090 - 9576985
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||| |||||||| |||||  |||||||||||||| |||||  |||||  |||||||||||   ||||||||||||| ||||||||||    
T  9577090 cgtctagaagtcctagctcaactggcaaatgctgaaattgcaaggccagacgtcatgacctgggttcgaacccagaacctcacagttgtatgtgagttta 9576991  T
Q  418 ttttca 423  Q
     |||||    
T  9576990 atttca 9576985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 442
Target Start/End: Complemental strand, 28591475 - 28591355
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    |||||||||||  | |||||| ||||   |||||||||||||||||||| ||||| | ||||| |||| || ||||||||||||||| |||||||| | |    
T  28591475 tagaagtcctaactaaactggcaaatactgaaattgcaaggccggacgtagtgactcgggttcaaacctgaaacctcacagttgtgtatgagtttaatgt 28591376  T
Q  422 caatggattaccacttcatct 442  Q
    || ||| ||||||||||||||    
T  28591375 cagtggtttaccacttcatct 28591355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 442
Target Start/End: Original strand, 23262567 - 23262667
Alignment:
Q  338 actggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccactt 437  Q
    |||| |||||| |||||||||||||| ||| ||||||||    |||||||||    |||| ||||||||||||||||||||||||| |||||||||||||    
T  23262567 actgataaatgccgaaattgcaaggctggatgttgtgac----gttcgaacctagaaccttacagttgtgtgtgagtttattttcagtggattaccactt 23262662  T
Q  438 catct 442  Q
    |||||    
T  23262663 catct 23262667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 2786270 - 2786393
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    ||||||||||||||| ||||| ||| ||||| |||||||| |||| ||||||  |||| ||   ||| |||| | |||||||||||||||| ||||||||    
T  2786270 cgtctagaagtcctaattcaattggcaaatgccgaaattgtaaggtcggacgccgtgatccgaattcaaacctgggacctcacagttgtgtatgagttta 2786369  T
Q  418 ttttcaatggattaccacttcatct 442  Q
      |||| ||||||||||||||||||    
T  2786370 -attcagtggattaccacttcatct 2786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 318 - 385
Target Start/End: Original strand, 30127893 - 30127960
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcg 385  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||||||||| | ||||||| ||||||    
T  30127893 cgtctagaagtcctagctcaacttgtaaatgccgaaattgcaaggccggacatcgtgacccgggttcg 30127960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 421
Target Start/End: Original strand, 2755925 - 2756027
Alignment:
Q  320 tctagaagtcctagttcaactgg-taaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||| |||| |||||| | |||||| |||||||||||||||| |||| |||| || | || |||| ||||||||  |||||||||||| ||||||    
T  2755925 tctagaagttctagctcaacttgataaatgccgaaattgcaaggccgaacgtggtgatccagttttgaactcgagacctagcagttgtgtgtgggtttat 2756024  T
Q  419 ttt 421  Q
    |||    
T  2756025 ttt 2756027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 41580142 - 41580080
Alignment:
Q  380 ggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||||| |||| |||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  41580142 ggttcgaatccgaaacctcacagttgtgtgtaggtttaattttaatggattaccacttcatct 41580080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 14270535 - 14270647
Alignment:
Q  330 ctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggat 429  Q
    |||| |||||||  ||||| |||||||| ||   ||||||| |||||||   ||| ||||||||| |||| |||||||| | |||||||||||| |||||    
T  14270535 ctagctcaactgacaaatgccgaaattgaaaaatcggacgtcgtgacccgtattccaacccgagatctcatagttgtgtttaagtttattttcagtggat 14270634  T
Q  430 taccacttcatct 442  Q
    || ||||||||||    
T  14270635 tatcacttcatct 14270647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 35545933 - 35546056
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||  |||||||  ||||| |||||||||||  ||| |||| |||| ||   |||||||| | |||||||||||||| |||| |||||     
T  35545933 gtctagaagttctaactcaactgacaaatgccgaaattgcaaaaccgaacgtcgtgatccgaattcgaacctgggacctcacagttgtatgtgggtttaa 35546032  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||| | ||||||| ||||||||||    
T  35546033 tttaagtggattatcacttcatct 35546056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 3049173 - 3049094
Alignment:
Q  328 tcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtg 407  Q
    |||||||||||||   ||||| | ||||||||||||||||||  |||||||   ||| |||||| |||||||||||||||    
T  3049173 tcctagttcaactcacaaatgccaaaattgcaaggccggacgccgtgacccgatttcaaacccgggacctcacagttgtg 3049094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 374
Target Start/End: Original strand, 38955228 - 38955283
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtg 374  Q
    |||||||||| |||| |||||| ||||||| |||||||||||||| ||| ||||||    
T  38955228 gtctagaagttctagctcaactagtaaatgccgaaattgcaaggcgggatgttgtg 38955283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 2e-47; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 26605623 - 26605747
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  26605623 cgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgaattta 26605722  T
Q  418 ttttcaatggattaccacttcatct 442  Q
    |||||| ||||||||||||||||||    
T  26605723 ttttcagtggattaccacttcatct 26605747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 10639734 - 10639611
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  10639734 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 10639635  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  10639634 tttcagtggattaccacttcatct 10639611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 19537307 - 19537430
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||||||  |||||||||||||||||| ||||||    
T  19537307 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgtgtttat 19537406  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  19537407 tttcagtggattaccacttcatct 19537430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 33083682 - 33083559
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  33083682 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 33083583  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  33083582 tttcagtggattaccacttcatct 33083559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 11459715 - 11459838
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||  |||||| |||||||||||| ||||||||||||||||||| ||||||    
T  11459715 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgtgtttat 11459814  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||||||||||||||||||||||    
T  11459815 tttcaatggattaccacttcatct 11459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 11708678 - 11708801
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||||    
T  11708678 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgggtttat 11708777  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  11708778 tttcagtggattaccacttcatct 11708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 34460369 - 34460492
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||  ||||| ||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||    
T  34460369 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccagaacctcacagttgtgtgtgagtttat 34460468  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  34460469 tttcagtggattaccacttcatct 34460492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 23839859 - 23839982
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||||| ||||| | ||||||||||||||||||||||||||  |||||||||| | ||||||||||||||||||||||||||    
T  23839859 gtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacctgggacctcacagttgtgtgtgagtttat 23839958  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  23839959 tttcagtggattaccacttcatct 23839982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 29659346 - 29659223
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| | |||||| ||||||| || ||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  29659346 gtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccgaacattgtgacccgggttcgaacccatgacctcacagttgtgtgtgagtttat 29659247  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  29659246 tttcagtggattaccacttcatct 29659223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 335 - 442
Target Start/End: Complemental strand, 37197722 - 37197615
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||||| ||||| |||||||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  37197722 tcaactggcaaatgccgaaattgcaaggctggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattacca 37197623  T
Q  435 cttcatct 442  Q
    ||||||||    
T  37197622 cttcatct 37197615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 45125293 - 45125170
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||   ||||||||| ||  |||||||||||||||||||||||||    
T  45125293 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacttgggttcgaactcggaacctcacagttgtgtgtgagtttat 45125194  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  45125193 tttcagtggattaccacttcatct 45125170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 19048754 - 19048877
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||| ||||||||||||  ||| || |||||||||||| ||||||||| |||||||||||||||     
T  19048754 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttag 19048853  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  19048854 tttcagtggtttaccacttcatct 19048877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 19816220 - 19816343
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||  ||||||||||||||||||||||||||||| |||| |||||||  ||||| ||||||||| |||||||||    
T  19816220 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgacccgggtttgaacccggaacctcgcagttgtgtatgagtttat 19816319  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| | |||||| |||||||||    
T  19816320 tttcagtagattacaacttcatct 19816343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 39535662 - 39535539
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||| | ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||| | ||||||||||     
T  39535662 gtctagaagtcctaactcaactagcaaatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttttatgtgagtttaa 39535563  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||| |  |||||||||||||||||    
T  39535562 tttgagcggattaccacttcatct 39535539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 323 - 442
Target Start/End: Complemental strand, 11816675 - 11816555
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgag-tttatttt 421  Q
    ||||||||||| |||||||| ||||| ||||||||||||| ||||||| ||||||  ||||||||||||  ||||||||||||| |||||| |||| |||    
T  11816675 agaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaattt 11816576  T
Q  422 caatggattaccacttcatct 442  Q
    || ||||||||||||||||||    
T  11816575 cagtggattaccacttcatct 11816555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 39831571 - 39831449
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||| ||||||||| |||||||| ||||  |||||||||||||||||||||  ||| || |||||||| ||| ||||||||| |||||||||||||||     
T  39831571 gtctataagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcatgatccgggttcgaa-ccgggacctcacaattgtgtgtgagtttaa 39831473  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  39831472 tttcagtggtttaccacttcatct 39831449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 441
Target Start/End: Original strand, 4851320 - 4851442
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||| |||||||||| |||||||  || || |||||||| || ||||||||| |||| || ||||| |||||| |||||||||||||||||||||||||     
T  4851320 gtcttgaagtcctagctcaactgtcaattgccgaaattgtaaagccggacgtcgtgatccgggttcaaacccgggacctcacagttgtgtgtgagtttaa 4851419  T
Q  419 tttcaatggattaccacttcatc 441  Q
    ||| | |||||||||||||||||    
T  4851420 ttttagtggattaccacttcatc 4851442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 7276015 - 7275891
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaa-tgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    ||||||||||||||  |||||||  ||| || ||||||||||||| |||| || ||| ||| |||||||||||| |||||||||||||||||| | ||||    
T  7276015 gtctagaagtcctaactcaactgacaaaatgccgaaattgcaaggtcggatgtcgtggcccgggttcgaacccgggacctcacagttgtgtgtaaattta 7275916  T
Q  418 ttttcaatggattaccacttcatct 442  Q
     ||| ||||||||||||||||||||    
T  7275915 attttaatggattaccacttcatct 7275891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 16654366 - 16654486
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    |||||||||||  ||||||| |||||| ||||||||||||||||||||  |||| ||  |||||||||||  ||||||||||||||||||||||||||||    
T  16654366 tagaagtcctaactcaactgataaatgccgaaattgcaaggccggacgccgtgatccgagttcgaacccggaacctcacagttgtgtgtgagtttatttt 16654465  T
Q  422 caatggattaccacttcatct 442  Q
     | || ||| || ||||||||    
T  16654466 tagtgaattgccccttcatct 16654486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 438
Target Start/End: Complemental strand, 40786337 - 40786218
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||  |||||||  ||||| ||||||||||||||||||||| ||||||||||||||||||  ||||||| |||||| |||||||||||     
T  40786337 gtctagaagtcataactcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccctggttcgaacctaagacctcgcagttgagtgtgagtttaa 40786238  T
Q  419 tttcaatggattaccacttc 438  Q
    ||| | || |||| ||||||    
T  40786237 ttttagtgaattatcacttc 40786218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 15782589 - 15782712
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||| ||||||||| |||| ||  ||||| |||||||| |||| |||||||  |||||| |||||||||||||||||| |||| |||||| |||||||    
T  15782589 cgtctaaaagtcctagctcaattgacaaatgccgaaattgtaaggtcggacgtcatgacccgggttcgaacccgagaccttacag-tgtgtgggagttta 15782687  T
Q  418 ttttcaatggattaccacttcatct 442  Q
     ||||| ||| ||||||||||||||    
T  15782688 atttcagtggtttaccacttcatct 15782712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 27138046 - 27137923
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||| |||||||  |||||  ||||||| ||||||| || | ||||||  |||||||||||| ||||| |||||| | ||||||||||    
T  27138046 cgtctagaagtcctagctcaactgacaaatgctgaaattg-aaggccgaacatcgtgacctgggttcgaacccgggaccttacagttttatgtgagttta 27137948  T
Q  418 ttttcaatggattaccacttcatct 442  Q
     ||||| ||||||||||||||||||    
T  27137947 atttcagtggattaccacttcatct 27137923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 34234530 - 34234651
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| |||| ||||||| |   ||| ||||||||||||||| |||  ||||||||||||     
T  34234530 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggatgttgtgatctgagtttgaacccgagacctcatagt--tgtgtgagtttaa 34234627  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| | ||| ||||||||||||    
T  34234628 tttcagtagatcaccacttcatct 34234651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 43778565 - 43778473
Alignment:
Q  350 cgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||| |||| | || ||||||  ||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  43778565 cgaaattgcaaagccgaatgtcgtgacctgggttcgaacctaagacttcacagttgtgtgtgagtttattttcattggattaccacttcatct 43778473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 43684073 - 43684192
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttc 422  Q
    ||||||||||  |||||||  ||||| |||||||||||||||||||    ||||   |||||||||||| |||| |||| || |||||||||||||||||    
T  43684073 agaagtcctatctcaactgacaaatgccgaaattgcaaggccggacaccatgacatgggttcgaacccgggaccccacaattatgtgtgagtttattttc 43684172  T
Q  423 aatggattaccacttcatct 442  Q
    | ||||||||||||||||||    
T  43684173 actggattaccacttcatct 43684192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 42578179 - 42578291
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||| |||||||  |||||| |||           ||||||||||||||||||||||||    
T  42578179 cgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgaccc-ggt-----------acctcacagttgtgtgtgagttta 42578266  T
Q  418 ttttcaatggattaccacttcatct 442  Q
    |||||| ||||||||||||||||||    
T  42578267 ttttcagtggattaccacttcatct 42578291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 4800879 - 4800999
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    ||||||| |||| ||||| || |||||||||||||||||||| |||||| ||||||   |||||||||||  ||||| | ||| |||||||||||| ||     
T  4800879 tagaagttctagctcaaccggcaaatgtcgaaattgcaaggctggacgtcgtgacctgagttcgaacccggaacctcgcggttatgtgtgagtttaattc 4800978  T
Q  422 caatggattaccacttcatct 442  Q
    || || |||||||||||||||    
T  4800979 cagtgaattaccacttcatct 4800999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 442
Target Start/End: Complemental strand, 38440322 - 38440202
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    ||||||| | || |||||||  ||||| ||||||||||||||||||||| ||||||| | | |||||| ||||||||  || | |||||||||||| |||    
T  38440322 tagaagttccagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgacccggatccgaacctgagacctcctagctatgtgtgagtttaattt 38440223  T
Q  422 caatggattaccacttcatct 442  Q
     | ||||||||||||||||||    
T  38440222 tagtggattaccacttcatct 38440202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 7349098 - 7349221
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||||| |  |||||||| |||||  || ||||||||||||||||| |||| ||  ||||||| |||||||||||||  | ||||||||||||     
T  7349098 gtctagaagtccaatctcaactggcaaatgctgatattgcaaggccggacgtcgtgatccgagttcgaatccgagacctcacaactatgtgtgagtttaa 7349197  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||| | ||||| ||||||||||||    
T  7349198 ttttagtggatcaccacttcatct 7349221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 42025674 - 42025794
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagt-ttatttt 421  Q
    ||||||||||| |||||||  |||||||||||||  ||||||||| || ||||||   ||||||||||   |||||||| |||||||||||| ||| |||    
T  42025674 agaagtcctagctcaactgacaaatgtcgaaattttaaggccggatgtcgtgacctgagttcgaacccagaacctcacaattgtgtgtgagtcttaattt 42025773  T
Q  422 caatggattaccacttcatct 442  Q
    || |||| |||||||||||||    
T  42025774 cagtggactaccacttcatct 42025794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 432
Target Start/End: Complemental strand, 33565010 - 33564924
Alignment:
Q  344 aaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattac 432  Q
    |||||||||||||| ||||| |||||| ||||||  |||||||||||||||||| | |||  |||||||||||| ||||||||| ||||    
T  33565010 aaatgtcgaaattgtaaggctggacgtcgtgacctaggttcgaacccgagaccttatagt--tgtgtgagtttaatttcaatggcttac 33564924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 442
Target Start/End: Complemental strand, 40825232 - 40825163
Alignment:
Q  373 tgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||| |||||||| |||||| ||  ||| |||||||||||||||||||||||||||| ||||||||||    
T  40825232 tgacccgggttcgaatccgagatcttccaggtgtgtgtgagtttattttcaatggattatcacttcatct 40825163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 416
Target Start/End: Complemental strand, 45202000 - 45201903
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttt 416  Q
    ||||||||||||||  |||| ||| |||||||||||||| |||| ||| ||| |||| ||  |||||||| ||  |||||||||||||||||||||||    
T  45202000 gtctagaagtcctaactcaattggcaaatgtcgaaattgtaaggtcggtcgtcgtgatccgagttcgaactcggaacctcacagttgtgtgtgagttt 45201903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 391
Target Start/End: Complemental strand, 25501907 - 25501839
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccg 391  Q
    ||||||||||| |||||||| |||||  |||||||||||||||||||| ||||||  ||||||||||||    
T  25501907 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccg 25501839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 442
Target Start/End: Original strand, 21312211 - 21312326
Alignment:
Q  325 aagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaa 424  Q
    |||| |||| |||| ||| ||||||| |||||| ||| ||||||||||||| |  || ||||||| | ||||||||| |  |||||||||||||||| |     
T  21312211 aagttctagctcaattggcaaatgtcaaaattgtaagaccggacgttgtgatctgggatcgaacctgggacctcacaat--tgtgtgagtttatttttag 21312308  T
Q  425 tggattaccacttcatct 442  Q
    || |||||||||||||||    
T  21312309 tgaattaccacttcatct 21312326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 33001706 - 33001825
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    |||| ||||||  |||||||| |||||| ||||||| ||| | | ||||||||||   ||||||||| |  |||||||||||| | |||||||||| |||    
T  33001706 tagaggtcctaactcaactggcaaatgttgaaattgtaagactgaacgttgtgactg-ggttcgaacacaggacctcacagttatatgtgagtttaattt 33001804  T
Q  422 caatggattaccacttcatct 442  Q
    || |||||||||| |||||||    
T  33001805 cagtggattaccatttcatct 33001825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 44181952 - 44181892
Alignment:
Q  382 ttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||| ||| || |||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  44181952 ttcgaatccgggatctcacagttgtgtgtgagtttattttcagtggattatcacttaatct 44181892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 18851617 - 18851556
Alignment:
Q  71 tatcaaagtgatttcttggggtgtagtcactatggacatttcggtaaagcaaaataggacaa 132  Q
    |||||||||||||||||||||| ||||||||| | |||||| ||| | ||||||| ||||||    
T  18851617 tatcaaagtgatttcttggggtatagtcactacgaacattttggtgaggcaaaatgggacaa 18851556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 34093240 - 34093361
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    |||||||  ||| |||||||  ||||||| |||||  |||| |||||||||||| || | ||| |||||||||| |||||  | ||| |||||||| |||    
T  34093240 tagaagttatagctcaactgacaaatgtcaaaattttaaggtcggacgttgtgatccagattcaaacccgagacatcacaaatatgtatgagtttaattt 34093339  T
Q  422 caatgga-ttaccacttcatct 442  Q
    || |||| ||||||||||||||    
T  34093340 cagtggacttaccacttcatct 34093361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 417
Target Start/End: Original strand, 38400486 - 38400567
Alignment:
Q  336 caactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||| |||||| ||||||||||||  ||||||| ||||||  |||||||| ||  ||||||| ||||||||| |||||||    
T  38400486 caactgataaatgccgaaattgcaagatcggacgtcgtgaccagggttcgaatccaggacctcatagttgtgtgcgagttta 38400567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 442
Target Start/End: Complemental strand, 20497715 - 20497595
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    |||||||||||  |||||| | |||||||||||||  ||||  | |||| ||||  | ||||| ||||||  |||||||| |||| |||||||||  |||    
T  20497715 tagaagtcctaactcaactagaaaatgtcgaaattataaggttgaacgtcgtgattcaggttcaaacccggaacctcacaattgtatgtgagttttattt 20497616  T
Q  422 caatggattaccacttcatct 442  Q
    || ||| ||||||||||||||    
T  20497615 cagtggtttaccacttcatct 20497595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 23497637 - 23497569
Alignment:
Q  323 agaagtcctagttcaactggt-aaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaaccc 390  Q
    ||||||||||||||||||||| ||||| ||||||||  |||||||| || ||||||  |||||||||||    
T  23497637 agaagtcctagttcaactggtaaaatgccgaaattgttaggccggatgtcgtgaccggggttcgaaccc 23497569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 32844702 - 32844654
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgt 370  Q
    |||||||  |||||||||||| ||||| |||||||||||||||||||||    
T  32844702 tagaagttttagttcaactggcaaatgccgaaattgcaaggccggacgt 32844654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 440
Target Start/End: Complemental strand, 34239947 - 34239827
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||||||||||  || ||| | ||||| |||||||| |||| | ||||| ||||| |  |||||||| |   |||| |||||||||| |||||||| |    
T  34239947 tctagaagtcctaactctactagcaaatgccgaaattgtaaggtcagacgtcgtgactcgagttcgaactcagaaccttacagttgtgtatgagtttaat 34239848  T
Q  420 ttcaatggattaccacttcat 440  Q
    ||||||  |||||||||||||    
T  34239847 ttcaataaattaccacttcat 34239827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 358
Target Start/End: Original strand, 13106356 - 13106395
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgc 358  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  13106356 gtctagaagtcctagctcaactggtaaatgtcaaaattgc 13106395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 56481 - 56604
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  56481 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 56580  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  56581 tttcagtggattaccacttcatct 56604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 7e-47; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 2146636 - 2146759
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  2146636 gtctagaagtcctagctcaactggaaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaagacctcacagttgtgtgtgggtttat 2146735  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  2146736 tttcagtggattaccacttcatct 2146759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 44083940 - 44084063
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  44083940 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 44084039  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  44084040 tttcagtggattaccacttcatct 44084063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 4106737 - 4106861
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    ||||||||||||||||  ||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||||||||    
T  4106737 cgtctagaagtcctagcccaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 4106836  T
Q  418 ttttcaatggattaccacttcatct 442  Q
    |||||| ||||||||||||||||||    
T  4106837 ttttcagtggattaccacttcatct 4106861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 23358185 - 23358308
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||  ||||||||||||||||||||| || |||| |||||||||||| ||||||||||||||||||||||||||    
T  23358185 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 23358284  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  23358285 tttcagtggattaccacttcatct 23358308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 31770660 - 31770537
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||| ||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  31770660 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggatgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 31770561  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  31770560 tttcagtggattaccacttcatct 31770537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 40058238 - 40058361
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||    
T  40058238 gtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtatgagtttat 40058337  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  40058338 tttcagtggattaccacttcatct 40058361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 25546403 - 25546280
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||  |||||| |||||||| ||| |||||||||||||||||||||||||     
T  25546403 gtctagaagtcctagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtttaa 25546304  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  25546303 tttcagtggtttaccacttcatct 25546280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 8439081 - 8439201
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    ||||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||| | |||||||||  |||||||||||||||||||| ||||||||    
T  8439081 tagaagtcctagttcaactggcaaatgccaaaattgcaaggtcggacgttgtgacccggattcgaacccaggacctcacagttgtgtgtgaatttatttt 8439180  T
Q  422 caatggattaccacttcatct 442  Q
    || ||||||||||||||||||    
T  8439181 cagtggattaccacttcatct 8439201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 4107325 - 4107432
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||||| ||||| |||||||||||||||||||||   ||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  4107325 tcaactggcaaatgccgaaattgcaaggccggacgtcacgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattacca 4107424  T
Q  435 cttcatct 442  Q
    ||||||||    
T  4107425 cttcatct 4107432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 25112375 - 25112252
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||  ||||||||||||| |||||||  |||||  |||||||||||| ||||||||||||||||||| ||||||    
T  25112375 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggtcggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgggtttat 25112276  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  25112275 tttcagtggattaccacttcatct 25112252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 47250378 - 47250256
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||| | || |||  |||||||||||||||||||    
T  47250378 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacctgggatctcttagttgtgtgtgagtttatt 47250279  T
Q  420 ttcaatggattaccacttcatct 442  Q
    |||| ||||||||||||||||||    
T  47250278 ttcagtggattaccacttcatct 47250256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 7162916 - 7162795
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||| ||||||||| |||||||| ||||| |||||||| |||||||||||||||||||| ||||||||| || ||||||||| |  |||||||||||||    
T  7162916 gtctaaaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaactcgggacctcacaat--tgtgtgagtttat 7162819  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  7162818 tttcagtggattaccacttcatct 7162795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 323 - 442
Target Start/End: Complemental strand, 43753878 - 43753758
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgag-tttatttt 421  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||  ||||||||||||  ||||||||||||| |||||| |||| |||    
T  43753878 agaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaattt 43753779  T
Q  422 caatggattaccacttcatct 442  Q
    || ||||||||||||||||||    
T  43753778 cagtggattaccacttcatct 43753758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 27229600 - 27229484
Alignment:
Q  325 aagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgag-tttattttca 423  Q
    ||||||||  |||||||  ||||||||||||||||||||||||||| ||||||  |||||||||||| ||||||||||||||||||||| |||| |||||    
T  27229600 aagtcctaactcaactgacaaatgtcgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacagttgtgtgtgagttttaatttca 27229501  T
Q  424 atggattaccacttcat 440  Q
     ||||||||||||||||    
T  27229500 gtggattaccacttcat 27229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 47570815 - 47570723
Alignment:
Q  350 cgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||||||||||||||||||  |||||| |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  47570815 cgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 47570723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 319 - 440
Target Start/End: Complemental strand, 5772947 - 5772826
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||| ||||| || ||||| ||||||||||||| |||||  |||||||| ||||||||| ||| ||||||||||||||||||||||||     
T  5772947 gtctagaagtcttagctcaacgggcaaatgccgaaattgcaaggtcggacaatgtgacccgggttcgaactcgaaacctcacagttgtgtgtgagtttaa 5772848  T
Q  419 tttcaatggattaccacttcat 440  Q
    ||||| ||| ||||||||||||    
T  5772847 tttcagtggtttaccacttcat 5772826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 27915709 - 27915585
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctg-gttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    ||||||||||||||  ||||||||||||||  |||||||||||| ||||||| |||||| || |||||||||  ||| ||||||||||||| ||||||||    
T  27915709 gtctagaagtcctaactcaactggtaaatgctgaaattgcaaggtcggacgtcgtgaccttgagttcgaacctaagatctcacagttgtgtatgagttta 27915610  T
Q  418 ttttcaatggattaccacttcatct 442  Q
     |||||||| |||||||||||||||    
T  27915609 atttcaatgaattaccacttcatct 27915585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 11355823 - 11355946
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||||||||||   ||||| ||||||||||||| |||||||| ||| |  | |||||||||| || ||||||||||||||||||||||     
T  11355823 gtctagaagttctagttcaactaacaaatgccgaaattgcaaggtcggacgttatgatctggattcgaacccgggatctcacagttgtgtgtgagtttaa 11355922  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  11355923 tttcagtggattaccacttcatct 11355946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 38033729 - 38033852
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||  |||||||| ||||| |||||||| |||| ||||| |||||| || ||||| || ||| ||||||||||||||||||||||||||    
T  38033729 gtctagaagttctaactcaactggcaaatgccgaaattgtaaggtcggacattgtgatccgggttcaaatccgggacctcacagttgtgtgtgagtttat 38033828  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| |||| |||||||||||||    
T  38033829 tttcagtggagtaccacttcatct 38033852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 38781304 - 38781213
Alignment:
Q  351 gaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||||||| | || ||||||| | |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38781304 gaaattgcaaggccgaatgtcgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatct 38781213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 47557781 - 47557904
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||||||||||| ||||||| ||||| || ||||  |||||| ||||||||||||  ||||||||||||| ||||||||||     
T  47557781 gtctagaagtcctaactcaactggtaaatgccgaaattacaaggtcgcacgtcatgacccgggttcgaacccggaacctcacagttgtatgtgagtttaa 47557880  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  47557881 tttcagtggtttaccacttcatct 47557904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 320 - 442
Target Start/End: Original strand, 48146754 - 48146876
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||| || |||| |||||||  |||||  |||||||||||| | || || ||||||| |||||||||||| ||||||||||||||||||||||| |||    
T  48146754 tctagaggttctagctcaactgaaaaatgcagaaattgcaaggtcagatgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttaatt 48146853  T
Q  420 ttcaatggattaccacttcatct 442  Q
    |||| ||||||||||||||||||    
T  48146854 ttcattggattaccacttcatct 48146876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 4001971 - 4001849
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||| ||| |||| ||||||| |||||||||||||||||||||||| || ||||||| ||||||||| || |||||| |||   ||||||||||||    
T  4001971 cgtctagatgtcatagtacaactggaaaatgtcgaaattgcaaggccggatgtcgtgacccgggttcgaactcgggacctctcag--ctgtgtgagttta 4001874  T
Q  418 ttttcaatggattaccacttcatct 442  Q
     ||||||||| ||||||||||||||    
T  4001873 atttcaatggtttaccacttcatct 4001849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 442
Target Start/End: Original strand, 41183833 - 41183938
Alignment:
Q  337 aactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccact 436  Q
    |||||| ||||| |||||||||||||||||||||  |||||  ||||||||||| | ||||||||||| |||||||||||||||||| ||||||| ||||    
T  41183833 aactggcaaatgccgaaattgcaaggccggacgtcttgacctgggttcgaacccaatacctcacagttatgtgtgagtttattttcagtggattatcact 41183932  T
Q  437 tcatct 442  Q
    ||||||    
T  41183933 tcatct 41183938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 319 - 440
Target Start/End: Original strand, 43203306 - 43203427
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| | |||||| ||||| |||||||| ||||| |||||  ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  43203306 gtctagaagtcctagatgaactggcaaatgccgaaattgtaaggcgggacgccgtgacccgggttcgaacccgggaccttacagttgtgtgtgagtttat 43203405  T
Q  419 tttcaatggattaccacttcat 440  Q
    || || ||||||  ||||||||    
T  43203406 ttacagtggattttcacttcat 43203427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 39514080 - 39513988
Alignment:
Q  350 cgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||||||||||||| |||||||  ||||||||||| ||||| |||||| |||||||||||| ||||  ||||||||||||||||||    
T  39514080 cgaaattgcaaggccggacgtcgtgacccgagttcgaacccgggaccttacagttatgtgtgagtttaatttcggtggattaccacttcatct 39513988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 15635007 - 15634884
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||| |||||| | ||||| |||||||| || | ||||||| ||||||| | |||||| |||  || ||||||||||||||||||||||    
T  15635007 gtctagaagtcatagctcaactagcaaatgccgaaattgtaaagtcggacgtcgtgacccggattcgaaaccggaacttcacagttgtgtgtgagtttat 15634908  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| | ||||||||||||||||    
T  15634907 tttcagtagattaccacttcatct 15634884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 28603027 - 28603134
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||||| ||||| |||||| |||||||||||||| ||||||   ||||||||||||||| ||||| |||| |||||||||| | ||| ||||||||||    
T  28603027 tcaactggcaaatgccgaaatcgcaaggccggacgtcgtgacctgagttcgaacccgagacttcacaattgtatgtgagtttaatctcagtggattacca 28603126  T
Q  435 cttcatct 442  Q
    ||||||||    
T  28603127 cttcatct 28603134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 32606458 - 32606335
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||  |||||||  ||||  ||||||||||||||||||||| ||||||| |||||||||||||||||| |||||| | ||||| ||||     
T  32606458 gtctagaagttctaactcaactgacaaataccgaaattgcaaggccggacgtcgtgacccaggttcgaacccgagaccttacagttttatgtgaatttaa 32606359  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| || ||||||| |||||||    
T  32606358 tttcagtgaattaccaattcatct 32606335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 43171067 - 43170944
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||| ||||||||  |||||||  ||||| ||||||||||||||||||||| || |||| ||||| || | ||||| || ||||||| ||||||||||     
T  43171067 gtctataagtcctaactcaactgacaaatgccgaaattgcaaggccggacgtcgtaacccaggttcaaatcggagacttcccagttgtatgtgagtttaa 43170968  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||||||||||||||| ||||||    
T  43170967 tttcaatggattaccacgtcatct 43170944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 326 - 440
Target Start/End: Complemental strand, 29484876 - 29484762
Alignment:
Q  326 agtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaat 425  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||  ||| |  |||| ||||||| ||||||||| |||| |||||||||| ||||| |    
T  29484876 agtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatctgggtttgaacccgggacctcacaattgtatgtgagtttaatttcagt 29484777  T
Q  426 ggattaccacttcat 440  Q
    |||||| ||||||||    
T  29484776 ggattatcacttcat 29484762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 42081743 - 42081624
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||||||||||| ||| |||| ||||||| ||||||||||  || ||||||||| || |||||||||| | |||||||||||  ||||||||||||||    
T  42081743 tctagaagtcctagctcagctggcaaatgtcaaaattgcaagatcgaacgttgtgatccgggttcgaacctg-gacctcacagt--tgtgtgagtttatt 42081647  T
Q  420 ttcaatggattaccacttcatct 442  Q
    |||| || |||||||||| ||||    
T  42081646 ttcagtgaattaccactttatct 42081624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 34763453 - 34763560
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| ||||||| |||            ||||| |||||||||||||||||||||||||    
T  34763453 cgtctagaagtcctagctcaactggaaaatgtcgaaattgcaagggcggacgtcgtg------------acccgggacctcacagttgtgtgtgagttta 34763540  T
Q  418 ttttcaatggattaccactt 437  Q
     ||||| |||||||||||||    
T  34763541 atttcagtggattaccactt 34763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 48444280 - 48444157
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||  ||||| |||||||| ||| | |||||| |||| |  |||||||||||   || |||||||||||||| ||||||     
T  48444280 gtctagaagtcctagctcaactgaaaaatgccgaaattgtaagactggacgtcgtgatctgggttcgaaccctgtacttcacagttgtgtgtaagtttaa 48444181  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| || |||||||||||||||    
T  48444180 tttcagtgaattaccacttcatct 48444157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 5587291 - 5587403
Alignment:
Q  330 ctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggat 429  Q
    |||| |||||||  ||||| |||||||||||| |||||| | |||| || |||||||||||  ||||||||| ||  ||||||||||| ||| | |||||    
T  5587291 ctagctcaactgacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggat 5587390  T
Q  430 taccacttcatct 442  Q
    |||||||||||||    
T  5587391 taccacttcatct 5587403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 5592252 - 5592364
Alignment:
Q  330 ctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggat 429  Q
    |||| |||||||  ||||| |||||||||||| |||||| | |||| || |||||||||||  ||||||||| ||  ||||||||||| ||| | |||||    
T  5592252 ctagctcaactgacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggat 5592351  T
Q  430 taccacttcatct 442  Q
    |||||||||||||    
T  5592352 taccacttcatct 5592364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 322 - 432
Target Start/End: Original strand, 13887174 - 13887282
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    |||||||| ||  |||||||| ||||| |||| ||||||| |||||||| ||||||| ||||||||||||  ||||||||||  ||| |||||||| |||    
T  13887174 tagaagtcttaactcaactggcaaatgccgaacttgcaagaccggacgtcgtgacccaggttcgaacccggaacctcacagt--tgtatgagtttaattt 13887271  T
Q  422 caatggattac 432  Q
    || ||||||||    
T  13887272 cagtggattac 13887282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 23036330 - 23036210
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||| |||||||||||||||||  ||||||| |||||  |||| |||||||| |||| | | ||||||| |   ||||||||||| ||||  |||||| |    
T  23036330 tctaaaagtcctagttcaactgacaaatgtcaaaattataaggtcggacgttatgactcagattcgaactcagaacctcacagttatgtg--agtttaat 23036233  T
Q  420 ttcaatggattaccacttcatct 442  Q
    |||||||||||||||||||||||    
T  23036232 ttcaatggattaccacttcatct 23036210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 442
Target Start/End: Complemental strand, 5463045 - 5462955
Alignment:
Q  352 aaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||| |  ||| ||||||| || | |||||||| |||| |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  5463045 aaattgcaatgttggatgttgtgatccggattcgaacctgagatctcacagttgtgtgtgagtttaatttcaatggagaaccacttcatct 5462955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 19630718 - 19630673
Alignment:
Q  397 tcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  19630718 tcacagttgtgtgtgagtttattttcagtggattaccacttcatct 19630673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 434
Target Start/End: Complemental strand, 10220600 - 10220485
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||||| ||| | | |||||| ||||| ||||||  ||| |  |||||||| |||| ||||||||||| ||||||||||||     
T  10220600 gtctagaagtcctaactcaactggcaaaagccaaaattgtaaggcaggacgtcatgatctgggttcgaatccgaaacctcacagttttgtgtgagtttaa 10220501  T
Q  419 tttcaatggattacca 434  Q
    ||||| ||| ||||||    
T  10220500 tttcagtggtttacca 10220485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 25872763 - 25872886
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||| ||| ||||| ||| ||| ||||| ||||||| |||| || ||||||||||   ||||| ||| |||||| |||||||||    
T  25872763 gtctagaagtcctaactcaattggcaaatgccgatattacaaggtcggacgtcgtgatccaggttcgaacctatgaccttacaattgtgtatgagtttat 25872862  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||  ||  ||||||||||||||    
T  25872863 tttctgtgatttaccacttcatct 25872886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 28111059 - 28110936
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||  |||||||  ||||||||||||||||||  ||||||| ||||||  | || |||||||| || ||| | |||| |||||| |||     
T  28111059 gtctagaagtcttaactcaactgacaaatgtcgaaattgcaagatcggacgtcgtgacctagatttgaacccgaaacttcatatttgtttgtgagattaa 28110960  T
Q  419 tttcaatggattaccacttcatct 442  Q
    |||||||||||||| |||| ||||    
T  28110959 tttcaatggattactactttatct 28110936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 35577951 - 35577881
Alignment:
Q  372 gtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||||  ||||||||||||||| ||||| |||||||| |||||| |||||||||||||| | |||||||    
T  35577951 gtgacccgagttcgaacccgagacttcacaattgtgtgtaagtttaatttcaatggattacaatttcatct 35577881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 440
Target Start/End: Original strand, 29255717 - 29255836
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||| ||||| | |||||||||||  |||||| |||| || |||||||||||  || || |||||| || |||||||||     
T  29255717 gtctagaagttctagctcaactggcaaatgccaaaattgcaaggttggacgtcgtgatccgggttcgaacccaggatcttacagtt-tgcgtgagttta- 29255814  T
Q  419 tttcaatggattaccacttcat 440  Q
     |||||||||||| ||||||||    
T  29255815 attcaatggattatcacttcat 29255836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 18506404 - 18506281
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    ||||||||||||||||  |||||   ||||||  ||||||||||| ||||  |  ||| ||  ||||||||||||||| ||||||| |||||||||||||    
T  18506404 cgtctagaagtcctagcacaactaaaaaatgttaaaattgcaaggtcggatatcatgatccgagttcgaacccgagacttcacagt-gtgtgtgagttta 18506306  T
Q  418 ttttcaatggattaccacttcatct 442  Q
     ||||| ||| ||||| ||||||||    
T  18506305 atttcagtggtttaccgcttcatct 18506281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 430
Target Start/End: Complemental strand, 25504059 - 25503950
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||  |||||||||||  ||||||| ||||||||| ||||||||| || ||||   || |||||| |||||||| |||   ||||||||||||    
T  25504059 gtctagaagttttagttcaactgacaaatgtcaaaattgcaaagccggacgtcgtaacccaaatttgaacccaagacctcatagt--cgtgtgagtttat 25503962  T
Q  419 tttcaatggatt 430  Q
    ||||| ||||||    
T  25503961 tttcagtggatt 25503950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 47961083 - 47960975
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||  |||||| | ||||| | ||||| ||||| | |||||  ||| || |||||||||||| ||||||  |||||||||||||||||     
T  47961083 gtctagaagtcttaactcaacttgcaaatgccaaaattacaaggtcagacgtcatgaaccgggttcgaacccgggacctcgtagttgtgtgtgagtttaa 47960984  T
Q  419 tttcaatgg 427  Q
    |||||||||    
T  47960983 tttcaatgg 47960975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 40642974 - 40643052
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacct 397  Q
    |||||||| || ||| |||||||  |||||||||||||| |||||| ||| |||||| || ||||| ||||||||||||    
T  40642974 gtctagaaatcttagctcaactgacaaatgtcgaaattgtaaggccagacattgtgatccgggttcaaacccgagacct 40643052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 46427359 - 46427464
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||| |||| |||| |||||||  |||| || |||||||||||  ||||||  |||| | | |||||| |||  ||||||||||||||||||||||||    
T  46427359 cgtctaaaagttctagctcaactgacaaatatcaaaattgcaaggttggacgtcatgactcggattcgaatccggaacctcacagttgtgtgtgagttta 46427458  T
Q  418 ttttca 423  Q
     |||||    
T  46427459 atttca 46427464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 35309886 - 35309977
Alignment:
Q  351 gaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||| ||||||||||||  |||||  | |||||| ||| || |||||| ||||||| ||||||| ||||| ||| ||| ||||||||||    
T  35309886 gaaattgtaaggccggacgtcttgacctggtttcgaatccgggatctcacaattgtgtgcgagtttaatttcagtggtttatcacttcatct 35309977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 441
Target Start/End: Complemental strand, 7298253 - 7298131
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||  ||| ||||||| |||||| | |||||  |||| |||| || ||||||| | |||||||| ||||||||||| || | || |||||||     
T  7298253 gtctagaagttatagctcaactgataaatgccaaaattataaggtcggatgtcgtgacccagattcgaacctgagacctcacaattatatgagagtttaa 7298154  T
Q  419 tttcaatggattaccacttcatc 441  Q
    ||| | | |||||| ||||||||    
T  7298153 ttttagtagattactacttcatc 7298131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 31288275 - 31288229
Alignment:
Q  396 ctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||||||| |||||| ||||| ||| ||||||||||||||    
T  31288275 ctcacagttgtgtgtaagtttaatttcagtggtttaccacttcatct 31288229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 440
Target Start/End: Complemental strand, 25050086 - 25049965
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||  |||||| | ||||| |||||||| |||| | ||||| ||||||  | || |||| |  || ||||||||||| ||||||||||     
T  25050086 gtctagaagttctaactcaactagaaaatgccgaaattgaaaggtcagacgtcgtgacctggatttgaactcatgatctcacagttgtatgtgagtttaa 25049987  T
Q  419 tttcaatggattaccacttcat 440  Q
    ||| | |||||||||| |||||    
T  25049986 tttaagtggattaccatttcat 25049965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 7e-47; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 28798516 - 28798393
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  28798516 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggaccttacagttgtgtgtgagtttat 28798417  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  28798416 tttcagtggattaccacttcatct 28798393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 45874054 - 45874178
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||| |||||||  ||||| | ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  45874054 cgtctagaagtcctagctcaactgacaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 45874153  T
Q  418 ttttcaatggattaccacttcatct 442  Q
    |||||| ||||||||||||||||||    
T  45874154 ttttcagtggattaccacttcatct 45874178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 19849631 - 19849508
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||||| |||| || |||||||||||| ||||||||||||||||||||||||||    
T  19849631 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 19849532  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||||||| ||||||||||||||    
T  19849531 tttcaatggtttaccacttcatct 19849508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 34739280 - 34739403
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  34739280 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 34739379  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  34739380 tttcagtggattaccacttcatct 34739403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 1173951 - 1174074
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||  |||||||||||| ||||||||||||||||||||||||||    
T  1173951 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgagtttat 1174050  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  1174051 tttcagtggattaccacttcatct 1174074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 43140034 - 43139911
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  43140034 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 43139935  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  43139934 tttcagtggattaccacttcatct 43139911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 26424985 - 26424863
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||| ||||||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  26424985 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggc-ggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 26424887  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  26424886 tttcagtggattaccacttcatct 26424863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 53457824 - 53457947
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||  |||||| |||||||| ||| ||||||||||||||||||||||||||    
T  53457824 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtttat 53457923  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  53457924 tttcagtggattaccacttcatct 53457947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 317 - 442
Target Start/End: Complemental strand, 54768562 - 54768437
Alignment:
Q  317 tcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttt 416  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||  ||||||||||||||||| ||||||    
T  54768562 tcgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtgcgagttt 54768463  T
Q  417 attttcaatggattaccacttcatct 442  Q
     |||||| ||||||||||||||||||    
T  54768462 tttttcagtggattaccacttcatct 54768437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 22607988 - 22608108
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    |||||||||||| |||||||  | ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||| |||||||| |||    
T  22607988 tagaagtcctagctcaactgacagatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtctgagtttaattt 22608087  T
Q  422 caatggattaccacttcatct 442  Q
    ||||||||||| |||||||||    
T  22608088 caatggattactacttcatct 22608108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 18257329 - 18257452
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  ||| || ||||||| |||| ||||||||||||||| ||||||||||    
T  18257329 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgagcccgggacctcacagttgtgcgtgagtttat 18257428  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  18257429 tttcagtggattaccacttcatct 18257452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 327 - 442
Target Start/End: Complemental strand, 23417603 - 23417488
Alignment:
Q  327 gtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatg 426  Q
    ||||||| |||||||| ||||| | ||||||||||||||||||||||||||| |||||||||||| ||| | ||||||||||||||||||||||||| ||    
T  23417603 gtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggactttacagttgtgtgtgagtttattttcagtg 23417504  T
Q  427 gattaccacttcatct 442  Q
    ||||||||||||||||    
T  23417503 gattaccacttcatct 23417488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 12735431 - 12735554
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||  ||||| | |||||| |||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  12735431 gtctagaagtactagctcaactgacaaatgccaaaattgtaaggccagacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtttat 12735530  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  12735531 tttcagtggattaccacttcatct 12735554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 23710461 - 23710338
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |  |||||||||||  |||||||||||     
T  23710461 gtctagaagtcatagctcaactggtaaatgtcgaaattgcaaggccggacgtcgtgacccggattcgaacctggaacctcacagttacgtgtgagtttaa 23710362  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  23710361 tttcagtggattaccacttcatct 23710338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 319 - 441
Target Start/End: Complemental strand, 238586 - 238464
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||  ||||| |||||||||||||| |||||   |||||  |||||||||||| ||||||||||||||||||||||||||    
T  238586 gtctagaagtcctagctcaactgtcaaatgccgaaattgcaaggctggacgccatgacctgggttcgaacccgggacctcacagttgtgtgtgagtttat 238487  T
Q  419 tttcaatggattaccacttcatc 441  Q
    ||||| |||||||||||||||||    
T  238486 tttcagtggattaccacttcatc 238464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 319 - 440
Target Start/End: Complemental strand, 19674057 - 19673936
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||| |||||||||||  |||||||||||| ||||||||| || |||| |||||||     
T  19674057 gtctagaagtcttagctcaactggtaaatgtagaaattgcaaggccgaacgttgtgacctgggttcgaacccgggacctcacaattatgtgcgagtttaa 19673958  T
Q  419 tttcaatggattaccacttcat 440  Q
    ||||| ||||||||||||||||    
T  19673957 tttcagtggattaccacttcat 19673936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 55214652 - 55214775
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||  |||||||  ||||| | ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||| |||||||||    
T  55214652 gtctagaagtcttaactcaactgtcaaatgccaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtatgagtttat 55214751  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||| ||||    
T  55214752 tttcagtggattaccactttatct 55214775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 12867841 - 12867964
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||  ||||| ||||||||||||| ||||||| |||||||  ||||||||| | || |||||||||||| ||||||||||    
T  12867841 gtctagaagttctagctcaactgtcaaatgccgaaattgcaaggtcggacgtcgtgacccgagttcgaacctgggatctcacagttgtgagtgagtttat 12867940  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  12867941 tttcagtggattaccacttcatct 12867964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 323 - 442
Target Start/End: Complemental strand, 29581167 - 29581049
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttc 422  Q
    ||||||||||| |||| ||  | ||| ||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||     
T  29581167 agaagtcctagctcaattgtcagatgccgaaattgcaaggccggacgtcgtgacctaggttcgaacccgagacctcacagttgtgtgtgagtttaattt- 29581069  T
Q  423 aatggattaccacttcatct 442  Q
    | ||||||||||||||||||    
T  29581068 agtggattaccacttcatct 29581049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 55400228 - 55400351
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||| |||||  |||||||||||||| |||||||||||||||||||||  ||| || | ||||||| ||  |||||| |||||| |||||||||||    
T  55400228 gtctagaaatcctaactcaactggtaaatgccgaaattgcaaggccggacgtcatgatccggattcgaactcggaacctcatagttgtatgtgagtttat 55400327  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  55400328 tttcagtggattaccacttcatct 55400351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 321 - 442
Target Start/End: Original strand, 19225261 - 19225382
Alignment:
Q  321 ctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattt 420  Q
    ||||||||||||| |||||||| ||||| |||||||| || |||||||||  ||| || |||||||||||| ||||||||| ||||| ||||||||| ||    
T  19225261 ctagaagtcctagctcaactggcaaatgccgaaattgtaaagccggacgtcatgatccgggttcgaacccgggacctcacaattgtgcgtgagtttagtt 19225360  T
Q  421 tcaatggattaccacttcatct 442  Q
    ||| ||| ||||||||||||||    
T  19225361 tcagtggtttaccacttcatct 19225382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 37134047 - 37134166
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    ||||||||||||||||||||||||| |||||  |||||| ||||| |||| ||  ||| || ||||||||||||| || |||||||||||||||||||||    
T  37134047 cgtctagaagtcctagttcaactggcaaatgctgaaattacaaggtcggatgtcatgatccgggttcgaacccgaaacttcacagttgtgtgtgagttta 37134146  T
Q  418 ttttcaatggattaccactt 437  Q
     ||||| ||| |||||||||    
T  37134147 atttcagtggtttaccactt 37134166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 11277982 - 11278101
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||| |  |||||| ||||| |||||| |||||||||||    ||||||||||     
T  11277982 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacatcatgacccgggttcaaacccgggacctcacagt----tgtgagtttaa 11278077  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  11278078 tttcagtggtttaccacttcatct 11278101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 340 - 438
Target Start/End: Original strand, 39807865 - 39807963
Alignment:
Q  340 tggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttc 438  Q
    ||||||||| ||||||||||||||| ||| | |||||||  |||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  39807865 tggtaaatgccgaaattgcaaggccagacatcgtgacccgagttcgaactcgggacctcacagttgtgtgtgagtttaatttcagtggattaccacttc 39807963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 319 - 412
Target Start/End: Complemental strand, 32441212 - 32441119
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtga 412  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| ||| |  |||||| |||||||||||| ||||||||||||||| ||||    
T  32441212 gtctagaagtcctagctcaactggcaaatgtcgaaattgcaaggccagacatcatgacccgggttcgaacccgggacctcacagttgtgcgtga 32441119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 2864877 - 2864753
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||  |||||||| ||||| | |||||||||||| |||||| ||||||| ||||||||||    |||||| ||||||||||||| |||    
T  2864877 cgtctagaagtcctaactcaactggcaaatgcctaaattgcaaggcgggacgtcgtgacccgggttcgaacctagaacctcagagttgtgtgtgagctta 2864778  T
Q  418 ttttcaatggattaccacttcatct 442  Q
     |||||| || ||||||||||||||    
T  2864777 atttcaaaggtttaccacttcatct 2864753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 12767087 - 12767210
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||||||||| |||||||| |||  |||||||  ||| |  |||||||| |||| ||||||||||||||||||||||||     
T  12767087 gtctagaagtcctagctcaactggtaaatgccgaaattgtaagatcggacgtcatgatctgggttcgaatccgaaacctcacagttgtgtgtgagtttaa 12767186  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||  ||||||||    
T  12767187 tttcactggtttactgcttcatct 12767210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 19814108 - 19814228
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatttt 421  Q
    |||||||| ||| |||||||| |||||  ||||||| |||||||||||| ||||||  ||||| |||| | ||||||||| || |||||||||||| |||    
T  19814108 tagaagtcttagctcaactggcaaatgcagaaattgtaaggccggacgtcgtgacctgggttcaaacctgggacctcacaattatgtgtgagtttaattt 19814207  T
Q  422 caatggattaccacttcatct 442  Q
    || | ||||||||||||||||    
T  19814208 cagttgattaccacttcatct 19814228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 409
Target Start/End: Original strand, 3465755 - 3465842
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtg 409  Q
    |||||||||||| |||||| | |||| ||||||||||||||||||||||||||| || ||||||||| || ||||||| |||||||||    
T  3465755 tagaagtcctagctcaactagcaaatatcgaaattgcaaggccggacgttgtgatccaggttcgaactcgggacctcatagttgtgtg 3465842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 440
Target Start/End: Original strand, 50033397 - 50033503
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggcc-ggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacc 433  Q
    |||||||  ||||| ||||||||||| | | |||||||||||||| |||||||||  ||||| |||||||||||||| |||||| |||||||| ||||||    
T  50033397 tcaactgtcaaatgccgaaattgcaaagactggacgttgtgacccgggttcgaacatgagacatcacagttgtgtgtaagtttaatttcaatgaattacc 50033496  T
Q  434 acttcat 440  Q
    |||||||    
T  50033497 acttcat 50033503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 22910385 - 22910269
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||||   | |||||||  ||| ||||||||||||||| ||||||| ||||||| |||||||||| | || ||||||||||||| | ||||||     
T  22910385 gtctagaagtctccgctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgtctaagtttaa 22910286  T
Q  419 tttcaatggattaccac 435  Q
    ||||||| |||||||||    
T  22910285 tttcaatagattaccac 22910269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 435
Target Start/End: Original strand, 22968137 - 22968253
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||||   | |||||||  ||| ||||||||||||||| ||||||| ||||||| |||||||||| | || ||||||||||||| | ||||||     
T  22968137 gtctagaagtctccgctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgtctaagtttaa 22968236  T
Q  419 tttcaatggattaccac 435  Q
    ||||||| |||||||||    
T  22968237 tttcaatagattaccac 22968253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 438
Target Start/End: Complemental strand, 24417974 - 24417887
Alignment:
Q  351 gaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttc 438  Q
    |||||||||||||  ||||| ||||||| |||||||| |||||||||||||||||||  |||||||| ||| | ||||||||||||||    
T  24417974 gaaattgcaaggcacgacgtcgtgacccgggttcgaatccgagacctcacagttgtggatgagtttaattttagtggattaccacttc 24417887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 445
Target Start/End: Complemental strand, 24518079 - 24517985
Alignment:
Q  351 gaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatctcag 445  Q
    ||||||| ||| ||||||||||||||||  |||||||||||| | |||||| || |||||||||||| ||| |||| |||||||||| |||||||    
T  24518079 gaaattgtaagaccggacgttgtgacccgtgttcgaacccgaaatctcacaattatgtgtgagtttaattttaatgaattaccacttaatctcag 24517985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 432
Target Start/End: Complemental strand, 49030841 - 49030754
Alignment:
Q  344 aaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattac 432  Q
    ||||||||||||||||||||||||||| |||| ||  ||||||||| || |||||| |||||||||||||||||  |||| ||||||||    
T  49030841 aaatgtcgaaattgcaaggccggacgtcgtgatccgagttcgaaccgga-acctcatagttgtgtgtgagtttaacttcagtggattac 49030754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 32778125 - 32778238
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||| || ||| |||||||  ||||  | ||||||||||| ||||||| |||| || ||||||||| |||||||||||| |  |||||||||||||    
T  32778125 gtctagaaatcatagatcaactgacaaataccaaaattgcaaggtcggacgtcgtgatccgggttcgaacacgagacctcacaat--tgtgtgagtttat 32778222  T
Q  419 tttcaatggattacca 434  Q
    ||| | ||||||||||    
T  32778223 ttttagtggattacca 32778238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 1966611 - 1966673
Alignment:
Q  380 ggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||  || ||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  1966611 ggttcgaattcgggacctcacagttgtgtgtgagtttaatttcagtggattacaacttcatct 1966673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 442
Target Start/End: Original strand, 16555320 - 16555430
Alignment:
Q  332 agttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggatta 431  Q
    |||||||||||||||| ||||||||| |||| ||||||| || || |   ||  || | || ||||||||||||||||||| |||| ||| |||| ||||    
T  16555320 agttcaactggtaaatatcgaaattgtaaggtcggacgtcgtaactcatatttaaatctgaaacctcacagttgtgtgtgaatttaattttaatgaatta 16555419  T
Q  432 ccacttcatct 442  Q
    |||||||||||    
T  16555420 ccacttcatct 16555430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 48822890 - 48822934
Alignment:
Q  396 ctcacagttgtgtgtgagtttattttcaatggattaccacttcat 440  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||    
T  48822890 ctcacagttgtgtgtgagtttaatttcaatagattaccacttcat 48822934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 19119144 - 19119195
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgt 370  Q
    ||||||||||| ||||||||||| |||||||| ||||| |||||||||||||    
T  19119144 gtctagaagtcttagttcaactgataaatgtcaaaattacaaggccggacgt 19119195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 31014982 - 31015105
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||| ||||||| ||||| | ||||||| |||| ||||| |  |||  | ||||||||  |   ||||||||||||||||||||||||     
T  31014982 gtctagaagtcatagctcaactgctaaatatggaaattgtaaggtcggacatcatgattcgggttcgaattcagaacctcacagttgtgtgtgagtttaa 31015081  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||  ||||||||||||||    
T  31015082 tttcagtgctttaccacttcatct 31015105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 437
Target Start/End: Complemental strand, 52172111 - 52172000
Alignment:
Q  326 agtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaat 425  Q
    ||||| || |||| ||| ||||||| |||||| |||||| ||||| ||||  | |||| |||||    |||||||| ||||||||||||||| ||||| |    
T  52172111 agtccaagctcaattggcaaatgtcaaaattgtaaggccagacgtcgtgattcgggtttgaacctagaacctcacaattgtgtgtgagtttaatttcagt 52172012  T
Q  426 ggattaccactt 437  Q
    ||||||||||||    
T  52172011 ggattaccactt 52172000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 442
Target Start/End: Complemental strand, 516551 - 516461
Alignment:
Q  352 aaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||||||||  |||||||||||| |  ||| ||||||  || |||||| ||||||||||||||||||||  ||||||||  ||||||||    
T  516551 aaattgcaaggttggacgttgtgactcgagtttgaacccaggatctcacaattgtgtgtgagtttattttcggtggattacagcttcatct 516461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 426
Target Start/End: Original strand, 2075566 - 2075612
Alignment:
Q  380 ggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatg 426  Q
    |||||||||||| |||||||||||| |||||||||||| ||||||||    
T  2075566 ggttcgaacccgggacctcacagttatgtgtgagtttaatttcaatg 2075612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 33770629 - 33770691
Alignment:
Q  380 ggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||||||||| ||| ||| ||||||||||||||||| ||||| ||| ||||| ||||||||    
T  33770629 ggttcgaacccgggacttcatagttgtgtgtgagtttaatttcagtggtttaccgcttcatct 33770691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 434
Target Start/End: Complemental strand, 52768351 - 52768313
Alignment:
Q  396 ctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  52768351 ctcacagttgtgtgtgagtttaatttcaatggattacca 52768313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 442
Target Start/End: Original strand, 1125953 - 1126010
Alignment:
Q  385 gaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||| ||| ||||||||||||| |||||||| |||||||  |||||||||||||||    
T  1125953 gaacccaagatctcacagttgtgtatgagtttaatttcaataaattaccacttcatct 1126010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 37620678 - 37620739
Alignment:
Q  380 ggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatc 441  Q
    |||||||||||| ||  |||||| | |||||||||||| ||||| |||||||||||||||||    
T  37620678 ggttcgaacccgggatatcacaggtttgtgtgagtttaatttcagtggattaccacttcatc 37620739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 52016080 - 52016123
Alignment:
Q  397 tcacagttgtgtgtgagtttattttcaatggattaccacttcat 440  Q
    ||||||||| || ||||||||||||| |||||||||||||||||    
T  52016080 tcacagttgggtatgagtttattttcgatggattaccacttcat 52016123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 440
Target Start/End: Original strand, 50035955 - 50036013
Alignment:
Q  382 ttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcat 440  Q
    |||||||| ||||| |||||||||||||| |||||| ||||| || ||||| |||||||    
T  50035955 ttcgaacctgagacttcacagttgtgtgtaagtttaatttcattgaattactacttcat 50036013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 438
Target Start/End: Original strand, 23532125 - 23532166
Alignment:
Q  397 tcacagttgtgtgtgagtttattttcaatggattaccacttc 438  Q
    ||||||||||||||||||||| ||||| || |||||||||||    
T  23532125 tcacagttgtgtgtgagtttaatttcagtgaattaccacttc 23532166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 442
Target Start/End: Original strand, 51287668 - 51287725
Alignment:
Q  386 aacccgagacctcacagttgtgtgtgag-tttattttcaatggattaccacttcatct 442  Q
    ||||||| |||||||||||||||||||| |||| ||||| || ||||||| |||||||    
T  51287668 aacccgaaacctcacagttgtgtgtgagttttaatttcagtgaattaccatttcatct 51287725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 14088 - 13956
Alignment:
Q  310 attaaactcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtg 409  Q
    |||||| | ||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||    
T  14088 attaaagtggtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtg 13989  T
Q  410 tgagtttattttcaatggattaccacttcatct 442  Q
    |||||||||||||| ||||||||||||||||||    
T  13988 tgagtttattttcagtggattaccacttcatct 13956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 310 - 442
Target Start/End: Complemental strand, 19768 - 19636
Alignment:
Q  310 attaaactcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtg 409  Q
    |||||| | ||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||    
T  19768 attaaagtggtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtg 19669  T
Q  410 tgagtttattttcaatggattaccacttcatct 442  Q
    |||||||||||||| ||||||||||||||||||    
T  19668 tgagtttattttcagtggattaccacttcatct 19636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 990 - 867
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  990 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 891  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  890 tttcagtggattaccacttcatct 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 317 - 440
Target Start/End: Original strand, 33704214 - 33704337
Alignment:
Q  317 tcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttt 416  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||    
T  33704214 tcgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 33704313  T
Q  417 attttcaatggattaccacttcat 440  Q
    ||||||| ||||||||||||||||    
T  33704314 attttcagtggattaccacttcat 33704337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 33621494 - 33621617
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||||||||     
T  33621494 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 33621593  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  33621594 tttcagtggtttaccacttcatct 33621617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 21037291 - 21037413
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||| |||||  |||||||||||||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||    
T  21037291 gtctagaagttctagctcaactggcaaatgctgaaattgcaaggccggacgttgtgactcgggttcgaatccg-gacctcacagttgtgtgtgagtttat 21037389  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| || |||||||||||||||    
T  21037390 tttcagtgaattaccacttcatct 21037413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 4464127 - 4464250
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| ||||||||||||  ||||| |||||||||||||||||||||  ||| || |||||||||| | |||||||||||||||||||||||||     
T  4464127 gtctagaagttctagttcaactgacaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacctgggacctcacagttgtgtgtgagtttaa 4464226  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  4464227 tttcagtggtttaccacttcatct 4464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 28322932 - 28323055
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||| ||||||||||||  ||| || |||||||||||| ||||||||| |||||||||||||||     
T  28322932 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttag 28323031  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  28323032 tttcagtggtttaccacttcatct 28323055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 21000692 - 21000815
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||| ||||  |||||  |||||||||||| ||||||||| ||||||||| |||||     
T  21000692 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccgtacgtcatgacctgggttcgaacccgggacctcacaattgtgtgtgggtttaa 21000791  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  21000792 tttcagtggtttaccacttcatct 21000815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 2959149 - 2959272
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||| | ||||| ||||||||||||||||||  | |||||   ||||||||||||||||||||||||||||||||||||||     
T  2959149 gtctagaagtcctaactcaactagcaaatgccgaaattgcaaggccggatatcgtgacttaggttcgaacccgagacctcacagttgtgtgtgagtttaa 2959248  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||  |||| |||||||||||||    
T  2959249 tttccgtggaataccacttcatct 2959272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 421
Target Start/End: Original strand, 11572008 - 11572110
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| ||||||   |||||  ||||||| |||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  11572008 gtctagaagtcctagctcaactaacaaatgcagaaattgtaaggccagacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 11572107  T
Q  419 ttt 421  Q
    |||    
T  11572108 ttt 11572110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 318 - 440
Target Start/End: Original strand, 12252022 - 12252144
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||| |||||||  ||||  ||| |||||||| ||||| || ||||||  |||| ||||||||||||||| |||||||||||||||||    
T  12252022 cgtctagaagtcctagctcaactgacaaataccgagattgcaagaccggatgtcgtgaccagggtttgaacccgagacctcatagttgtgtgtgagttta 12252121  T
Q  418 ttttcaatggattaccacttcat 440  Q
     ||| ||||| ||||||||||||    
T  12252122 attttaatggcttaccacttcat 12252144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 35218756 - 35218645
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| | ||||||||||||||||||||||||||| ||            |||||||||||||||||||||||||    
T  35218756 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccggg------------acctcacagttgtgtgtgagtttat 35218669  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  35218668 tttcagtggattaccacttcatct 35218645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 24619207 - 24619084
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||||  ||||||| |||||| ||||||| |||| |||||||  |||||| |||| ||||||| | |||||||||||||||     
T  24619207 gtctagaagtcctaactcaactgacaaatgtcaaaattgtaaggccgaacgtcgtgacccgagttcgatcccgtgacctcataattgtgtgtgagtttaa 24619108  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| | ||||||||||||||||    
T  24619107 tttcagtcgattaccacttcatct 24619084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 29009779 - 29009655
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||| ||||||||||||||||| |  |||||  ||| ||| ||||||||||||  ||||||   |||||||| | |||||||||||||||||||||||||    
T  29009779 cgtcgagaagtcctagttcaacggacaaatgctgaagttgtaaggccggacgtcatgacccgaattcgaacctgggacctcacagttgtgtgtgagttta 29009680  T
Q  418 ttttcaatggattaccacttcatct 442  Q
    |||| | || |||||||||||||||    
T  29009679 tttttagtgaattaccacttcatct 29009655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 361011 - 361134
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||| ||| |||| ||||| | |||||||||||||| || | ||||| | ||||||||||||  ||||||||||| | ||||||||||     
T  361011 gtctagaagtcttagctcatctggcaaatgccaaaattgcaaggccgaacatcgtgacacgggttcgaacccggaacctcacagttatatgtgagtttaa 361110  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||| ||||||||||    
T  361111 tttcagtggattaacacttcatct 361134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 19145503 - 19145593
Alignment:
Q  351 gaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    |||||||||||||||||||| ||||||| | || ||||||| ||||||||| |||||||||| |||| ||||| ||||||||||||||||||    
T  19145503 gaaattgcaaggccggacgtcgtgaccc-gttttgaacccgggacctcacaattgtgtgtgaatttaatttcagtggattaccacttcatct 19145593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 441
Target Start/End: Original strand, 32289348 - 32289467
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| ||||  ||||||| ||||| |||||||||||| ||||| ||||||| ||   ||||||| ||||||||||||||||||||| |||||||    
T  32289348 gtctagaagttctag--caactggcaaatgccgaaattgcaag-ccggatgttgtgatccgaattcgaactcgagacctcacagttgtgtgtaagtttat 32289444  T
Q  419 tttcaatggattaccacttcatc 441  Q
    | ||| || ||||||||||||||    
T  32289445 tatcagtgaattaccacttcatc 32289467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 16518456 - 16518544
Alignment:
Q  352 aaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||| ||||||||||||||  |||||||||||  || ||||||||  |||||||||||||||||| |||||||||| |||||||    
T  16518456 aaattgcaaggtcggacgttgtgacctgggttcgaacccaggagctcacagt--tgtgtgagtttattttcagtggattaccatttcatct 16518544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 423
Target Start/End: Original strand, 3057402 - 3057502
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||| || ||||||||||||||| ||||| |||||||||||     ||||||||||  ||  ||||||||||||||||||||||    
T  3057402 gtctagaagttctagctcaattgataaatgtcgaaattgtaaggctggacgttgtga----tgttcgaacccaggatatcacagttgtgtgtgagtttat 3057497  T
Q  419 tttca 423  Q
    |||||    
T  3057498 tttca 3057502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 28592188 - 28592141
Alignment:
Q  387 acccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  28592188 acccaagacctcacagttgtgtgtgagtttattttcaatggattacca 28592141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 440
Target Start/End: Original strand, 7613308 - 7613425
Alignment:
Q  324 gaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcac-agttgtgtgtgagtttattttc 422  Q
    |||||| ||||||||| ||||||| ||||||||||||| |||||  | ||||| | |||||||||| |||||||||| || | ||| |||||||| ||||    
T  7613308 gaagtcttagttcaacgggtaaatatcgaaattgcaagaccggatatcgtgactcaggttcgaacctgagacctcacaagatatgtatgagtttaatttc 7613407  T
Q  423 aatggattaccacttcat 440  Q
    | ||  ||||||||||||    
T  7613408 agtgatttaccacttcat 7613425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 439
Target Start/End: Complemental strand, 10999536 - 10999416
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| ||| |||| ||  ||||| ||||| ||||||| ||||||  |||| || ||| |||| || | | ||||||||||| ||||||||||     
T  10999536 gtctagaagtcatagctcaattgacaaatgccgaaactgcaaggtcggacgaagtgatccaggtacgaatccaaaatctcacagttgtatgtgagtttaa 10999437  T
Q  419 tttcaatggattaccacttca 439  Q
    ||||| |||||||||||||||    
T  10999436 tttcagtggattaccacttca 10999416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 434
Target Start/End: Complemental strand, 32354028 - 32353954
Alignment:
Q  359 aaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||| ||||||||||||| | | |||||||  | ||| ||||||||||||||||||||||||||||| ||||||||    
T  32354028 aaggtcggacgttgtgactcggattcgaactgg-gacttcacagttgtgtgtgagtttattttcaattgattacca 32353954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 440
Target Start/End: Complemental strand, 5598887 - 5598782
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||||  ||||||| ||||||||||||| ||||| ||||   |||||| |||   | | ||||||||| ||||||| |||||||||||||||||| ||    
T  5598887 tcaactgacaaatgtcaaaattgcaaggccagacgtcgtgattttggttcaaacttaaaatctcacagttatgtgtgaatttattttcaatggattaaca 5598788  T
Q  435 cttcat 440  Q
    | ||||    
T  5598787 catcat 5598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 10226621 - 10226540
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctca 399  Q
    |||||||||||||||| |||||||| ||||  ||||||| ||| || |||| | ||||| | |||||||||||| |||||||    
T  10226621 cgtctagaagtcctagctcaactggcaaattccgaaattacaaagctggacttcgtgacacgggttcgaacccgggacctca 10226540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 417
Target Start/End: Complemental strand, 17590443 - 17590392
Alignment:
Q  366 gacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    ||||||||||| | ||||||||||||   |||||||||||||||||||||||    
T  17590443 gacgttgtgactcgggttcgaacccggagcctcacagttgtgtgtgagttta 17590392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 378
Target Start/End: Complemental strand, 28592244 - 28592185
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccc 378  Q
    ||||||||||||||| | |||||| ||||| |||||||  ||||| ||||||||||||||    
T  28592244 gtctagaagtcctagcttaactggcaaatgccgaaattataaggctggacgttgtgaccc 28592185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 438
Target Start/End: Original strand, 22576234 - 22576300
Alignment:
Q  372 gtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttc 438  Q
    ||||||| | ||||||||||  ||||||||||| |||||||||||  ||||| || |||||||||||    
T  22576234 gtgacccagattcgaacccggaacctcacagttatgtgtgagtttgatttcattgtattaccacttc 22576300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 409
Target Start/End: Original strand, 33255489 - 33255578
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtg 409  Q
    ||||| ||||||||| ||| |||| ||||| | |||||| ||||| ||||||| |||||   ||||||||| | |||||||||||||||||    
T  33255489 gtctataagtcctagctcagctggcaaatgccaaaattgtaaggctggacgtt-tgacctgagttcgaacctgggacctcacagttgtgtg 33255578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 440
Target Start/End: Complemental strand, 584895 - 584791
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||| | ||||| ||||||||||||| ||||||| ||||||| | ||||||  || ||||||||| || | |||||||||  |||||  ||||| |||    
T  584895 tcaactagcaaatgccgaaattgcaagg-cggacgtcgtgacccggattcgaattcgggacctcacaattttatgtgagtttgatttcagaggattgcca 584797  T
Q  435 cttcat 440  Q
    ||||||    
T  584796 cttcat 584791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 437
Target Start/End: Complemental strand, 7487392 - 7487278
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| ||||| || ||||||||||||| ||||  ||| ||| |||| || ||||| |||||   |||||||| |    ||||||||||     
T  7487392 gtctagaagtcctagatcaaccggcaaatgtcgaaattacaagatcgggcgtcgtgagccaggttcaaacccagaacctcacaat----tgtgagtttaa 7487297  T
Q  419 tttcaatggattaccactt 437  Q
    ||||| ||| |||||||||    
T  7487296 tttcagtggcttaccactt 7487278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 405
Target Start/End: Complemental strand, 33688251 - 33688206
Alignment:
Q  360 aggccggacgttgtgaccctggttcgaacccgagacctcacagttg 405  Q
    ||||||||||| ||||||| | |||||| |||||||||||||||||    
T  33688251 aggccggacgtcgtgacccagattcgaatccgagacctcacagttg 33688206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 7014375 - 7014315
Alignment:
Q  382 ttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||| |||||| | || | |||||||||| ||||| || |||||||||||||||    
T  7014375 ttcgaacccgaaacctcataattttatgtgagtttaatttcagtgtattaccacttcatct 7014315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 7824582 - 7824459
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  7824582 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 7824483  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  7824482 tttcagtggattaccacttcatct 7824459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 29689610 - 29689487
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  29689610 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 29689511  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  29689510 tttcagtggattaccacttcatct 29689487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 43247778 - 43247655
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| | ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||    
T  43247778 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacccgggacctcacagttgtgtgtgagtttat 43247679  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  43247678 tttcagtggattaccacttcatct 43247655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 319 - 441
Target Start/End: Complemental strand, 55018162 - 55018040
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  55018162 gtctagaagtcctaactcaactggcaaatgtcaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 55018063  T
Q  419 tttcaatggattaccacttcatc 441  Q
    ||||| |||||||||||||||||    
T  55018062 tttcagtggattaccacttcatc 55018040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 317 - 442
Target Start/End: Complemental strand, 54151811 - 54151686
Alignment:
Q  317 tcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttt 416  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||| |||||||    
T  54151811 tcgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtatgagttt 54151712  T
Q  417 attttcaatggattaccacttcatct 442  Q
    ||||||| ||||||||||||||||||    
T  54151711 attttcagtggattaccacttcatct 54151686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 54158266 - 54158389
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  ||| || |||||||||||| ||||||||||||||||||||||||||    
T  54158266 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 54158365  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  54158366 tttcagtggattaccacttcatct 54158389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 4601425 - 4601548
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||| ||||||||||||  |||||||||||||||||||||||||    
T  4601425 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 4601524  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| |||||||||| |||||||    
T  4601525 tttcagtggattaccagttcatct 4601548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 51666053 - 51665930
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||  |||||  |||||||||||| ||||| ||||||||||||||||||||    
T  51666053 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggaccttacagttgtgtgtgagtttat 51665954  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  51665953 tttcagtggattaccacttcatct 51665930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 317 - 442
Target Start/End: Original strand, 1778849 - 1778974
Alignment:
Q  317 tcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttt 416  Q
    ||||||||||||||||| |||||||  ||||| ||||||||||||||||||| ||||||||| ||||||||||||  |||||||| |||||| ||| |||    
T  1778849 tcgtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacattgtgacccgggttcgaacccggaacctcacaattgtgtttgaattt 1778948  T
Q  417 attttcaatggattaccacttcatct 442  Q
    ||||||||||||||||||||||||||    
T  1778949 attttcaatggattaccacttcatct 1778974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 335 - 442
Target Start/End: Complemental strand, 36229106 - 36228999
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||||| ||||| |||||||||||||||||||||  ||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36229106 tcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcaatggattacca 36229007  T
Q  435 cttcatct 442  Q
    ||||||||    
T  36229006 cttcatct 36228999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 52500838 - 52500961
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||||||||  ||| || |||||||||| || |||||||||||||||||||||||||    
T  52500838 gtctagaagtcctagctcaactggcaaatgtcgaaattgtaaggccggacgtcatgatccgggttcgaacctgaaacctcacagttgtgtgtgagtttat 52500937  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| | ||||||||||||||||    
T  52500938 tttcagtagattaccacttcatct 52500961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 332 - 442
Target Start/End: Complemental strand, 9349791 - 9349681
Alignment:
Q  332 agttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggatta 431  Q
    ||||||||||| ||||| ||||||||||||| ||||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  9349791 agttcaactggcaaatgccgaaattgcaaggtcggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggatta 9349692  T
Q  432 ccacttcatct 442  Q
    |||||||||||    
T  9349691 ccacttcatct 9349681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 28844504 - 28844628
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta- 417  Q
    |||||||||| |||| |||||||  ||||| ||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||     
T  28844504 gtctagaagttctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacctggaacctcacagttgtgtgtgagtttat 28844603  T
Q  418 ttttcaatggattaccacttcatct 442  Q
    |||||| ||||||||||||||||||    
T  28844604 ttttcagtggattaccacttcatct 28844628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 335 - 442
Target Start/End: Complemental strand, 3113107 - 3113000
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||||| ||||| ||||||||||||||||||||| || ||||  ||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  3113107 tcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgagttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattacca 3113008  T
Q  435 cttcatct 442  Q
    ||||||||    
T  3113007 cttcatct 3113000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 35461607 - 35461504
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||| ||||| ||||||||||||| |||||||||||| || ||||||||||||  |||||||||||||||||||||||||    
T  35461607 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgagtttat 35461508  T
Q  419 tttc 422  Q
    ||||    
T  35461507 tttc 35461504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 42392933 - 42392810
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||  ||| || || ||||||||| ||||||||| |||||||||||||||     
T  42392933 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgatccgggctcgaacccgggacctcacaattgtgtgtgagtttaa 42392834  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  42392833 tttcagtggtttaccacttcatct 42392810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 319 - 440
Target Start/End: Original strand, 33334608 - 33334729
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||| | ||||| ||||||||||| ||||||||||||||||   ||||||| ||| |||||||||||||||||||||||||     
T  33334608 gtctagaagtcctagctcaacttgcaaatgccgaaattgcaaagccggacgttgtgacctgagttcgaatccgggacctcacagttgtgtgtgagtttaa 33334707  T
Q  419 tttcaatggattaccacttcat 440  Q
    ||||| | ||||| ||||||||    
T  33334708 tttcagtagattatcacttcat 33334729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 319 - 440
Target Start/End: Complemental strand, 32001552 - 32001431
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||||||||||| |||||||| ||||||| || |  ||| || ||||||||| ||||| |||||||||||||||||||||||    
T  32001552 gtctagaagtcctacctcaactggtaaatgccgaaattgtaaggccgaacatcttgaaccaggttcgaactcgagatctcacagttgtgtgtgagtttat 32001453  T
Q  419 tttcaatggattaccacttcat 440  Q
    ||||| ||  ||||||||||||    
T  32001452 tttcagtgatttaccacttcat 32001431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 308 - 442
Target Start/End: Complemental strand, 47635144 - 47635010
Alignment:
Q  308 tcattaaactcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtg 407  Q
    |||||||  |||||||||||||||| |||||||||||||| | | |||||||||| ||||| ||||||||  |||||||| ||  |||||| ||||| ||    
T  47635144 tcattaatgtcgtctagaagtcctaattcaactggtaaattttggaattgcaaggtcggacattgtgacctgggttcgaatccaggacctcgcagttatg 47635045  T
Q  408 tgtgagtttattttcaatggattaccacttcatct 442  Q
    ||| |||||| ||||| | ||||||||||||||||    
T  47635044 tgtaagtttaatttcagttgattaccacttcatct 47635010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 41377583 - 41377702
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||| |||||||| ||||| | |||||| ||||||||||||  ||| || |||||||||||| ||||||||     ||||||||||||    
T  41377583 cgtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccggacgtcatgatccaggttcgaacccgggacctcac-----tgtgtgagttta 41377677  T
Q  418 ttttcaatggattaccacttcatct 442  Q
    ||||||  |||||||||||||||||    
T  41377678 ttttcagcggattaccacttcatct 41377702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 7958568 - 7958692
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagttta 417  Q
    |||||||||||||||  |||||||  ||||||| |||||| || || ||| |  |||| || |||||||||||| |||||||||||| ||||| ||||||    
T  7958568 cgtctagaagtcctacctcaactgacaaatgtcaaaattgtaaagcaggatgccgtgatccgggttcgaacccgggacctcacagttatgtgtaagttta 7958667  T
Q  418 ttttcaatggattaccacttcatct 442  Q
    |||| | ||||||||||||||||||    
T  7958668 tttttagtggattaccacttcatct 7958692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 38257404 - 38257308
Alignment:
Q  346 atgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||||||||| ||||||| ||||||  |||||||||||   |||||||| ||||||||||||||| |||||  |||||||||||||||||    
T  38257404 atgtcgaaattgcaaggtcggacgtcgtgacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagcggattaccacttcatct 38257308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 29750621 - 29750743
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||  |||||||| ||||| |||||||||||||| |||||| ||||||| | |||||||  ||||||||||| ||||| ||||| |||     
T  29750621 gtctagaagtactaactcaactggcaaatgccgaaattgcaaggctggacgtcgtgacccggattcgaactagagacctcacatttgtgcgtgag-ttaa 29750719  T
Q  419 tttcaatggattaccacttcatct 442  Q
     |||| ||||||||||||||||||    
T  29750720 attcagtggattaccacttcatct 29750743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 442
Target Start/End: Complemental strand, 40756858 - 40756732
Alignment:
Q  317 tcgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttg-tgaccctggttcgaacccgagacctcacagttgtgtgtgagtt 415  Q
    ||||||||||||||||  |||||||  ||||| | ||||||||||| | |||| |  ||| || | |||||||||||||||||||||||| |||||||||    
T  40756858 tcgtctagaagtcctaactcaactgaaaaatgccaaaattgcaaggtcagacgatcatgatccggattcgaacccgagacctcacagttgcgtgtgagtt 40756759  T
Q  416 tattttcaatggattaccacttcatct 442  Q
    || ||||| | | ||||||||||||||    
T  40756758 taatttcagtagtttaccacttcatct 40756732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 442
Target Start/End: Complemental strand, 475402 - 475286
Alignment:
Q  325 aagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaa 424  Q
    ||||| ||| |||||||| |||||  |||||||||||| |||||||  ||| || ||||||||| ||  ||||||||||||||||||||||||  ||||     
T  475402 aagtcttagatcaactgggaaatgctgaaattgcaaggtcggacgtcatgatccgggttcgaactcggaacctcacagttgtgtgtgagttta-attcag 475304  T
Q  425 tggattaccacttcatct 442  Q
    || |||||||||||||||    
T  475303 tgaattaccacttcatct 475286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 442
Target Start/End: Original strand, 8151371 - 8151471
Alignment:
Q  342 gtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatc 441  Q
    |||||||  |||||||||| | || |||| |||| || ||||||||||||||| ||||||||| ||||| |||||| |||||||||||||||  ||||||    
T  8151371 gtaaatgctgaaattgcaaagacgaacgtcgtgatccgggttcgaacccgagatctcacagttatgtgtcagtttaatttcaatggattaccggttcatc 8151470  T
Q  442 t 442  Q
    |    
T  8151471 t 8151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 28458663 - 28458785
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||  |||||||  ||||||||||||||||||||| || || |||| || |||| ||||||   |||||||||||| |||| ||||||     
T  28458663 gtctagaagtcctaactcaactgacaaatgtcgaaattgcaaggccagatgtcgtgatcc-ggtttgaacccagaacctcacagttgcgtgtaagtttaa 28458761  T
Q  419 tttcaatggattaccacttcatct 442  Q
     ||||||  |||||||||||||||    
T  28458762 cttcaataaattaccacttcatct 28458785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 43775239 - 43775346
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||||| ||||| |||||||| |||| |||||||||||||    ||||||| |||  | ||||||||||| | |||||||| ||||| ||||||||||    
T  43775239 tcaactggcaaatgccgaaattgtaaggtcggacgttgtgacttgcgttcgaatccggaatctcacagttgtatttgagtttaatttcagtggattacca 43775338  T
Q  435 cttcatct 442  Q
    ||||||||    
T  43775339 cttcatct 43775346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 50729524 - 50729647
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||  ||||| |||||||| |||| | ||||| |||| |  | |||||||  |||||||| ||||| | ||||||||||     
T  50729524 gtctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagtttaa 50729623  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||||| ||||||||||||||||    
T  50729624 tttcaatagattaccacttcatct 50729647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 50783325 - 50783202
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||  ||||| |||||||| |||| | ||||| |||| |  | |||||||  |||||||| ||||| | ||||||||||     
T  50783325 gtctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagtttaa 50783226  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||||| ||||||||||||||||    
T  50783225 tttcaatagattaccacttcatct 50783202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 437
Target Start/End: Original strand, 15863700 - 15863817
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||||||  ||||||| ||| |||||  | ||||||||  ||| |||||||||| || ||||||||||||| |  ||||||||| ||||||||||| |    
T  15863700 tctagaagttttagttcatctgataaataccaaaattgcatagccagacgttgtgatccaggttcgaacccgaaaattcacagttgagtgtgagtttaat 15863799  T
Q  420 ttcaatggattaccactt 437  Q
    || ||| |||||||||||    
T  15863800 tttaatagattaccactt 15863817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 55320454 - 55320405
Alignment:
Q  393 gacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  55320454 gacctcatagttgtgtgtgagtttattttcagtggattaccacttcatct 55320405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 47770329 - 47770446
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttc 422  Q
    ||||||||||| ||||||| |||||||||||||||||||  ||||||| ||||||  | |||||| |||| | |||  | |  |||||||||||| ||||    
T  47770329 agaagtcctagctcaactgataaatgtcgaaattgcaagctcggacgtcgtgacctggattcgaatccgaaatctcgtaat--tgtgtgagtttaatttc 47770426  T
Q  423 aatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||    
T  47770427 aatggtttatcacttcatct 47770446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 448987 - 448884
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    |||||||  ||||||| |||||| |||||||||||| |||| ||   ||||||||   |||||||||||||| |||||||||| ||| | ||||||||||    
T  448987 tcaactgacaaatgtcaaaattgtaaggccggacgtcgtgatccgaattcgaacctaggacctcacagttgtttgtgagtttaattttagtggattacca 448888  T
Q  435 cttc 438  Q
    ||||    
T  448887 cttc 448884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 418
Target Start/End: Complemental strand, 51112588 - 51112493
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||| |||||||| ||||| ||||||||| |||||||||||  |||||  ||||||||||| ||  | | || ||||||||||||||||    
T  51112588 agaagtcctagctcaactggcaaatgccgaaattgctaggccggacgtcatgaccggggttcgaaccccagtgcccccacttgtgtgtgagtttat 51112493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 442
Target Start/End: Original strand, 51054702 - 51054824
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||||||||||||  |||||||  ||||||||||||| ||||| || ||||| |||  | ||||||||| | | |||||| | |||| ||| |||||| |    
T  51054702 tctagaagtcctaactcaactgacaaatgtcgaaattacaaggtcgaacgttatgattcgggttcgaactcaaaacctcataattgtttgtaagtttaat 51054801  T
Q  420 ttcaatggattaccacttcatct 442  Q
    || | ||||||||||||||||||    
T  51054802 ttaagtggattaccacttcatct 51054824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 406
Target Start/End: Original strand, 31255406 - 31255493
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgt 406  Q
    ||||||||||||||  |||||||  |||||||||||||  || || |||||| ||||||| |||||||||||| | ||||||| ||||    
T  31255406 gtctagaagtcctaactcaactgacaaatgtcgaaattataaagctggacgtcgtgacccgggttcgaacccgggtcctcacaattgt 31255493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 2590928 - 2590815
Alignment:
Q  320 tctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttatt 419  Q
    |||| ||||||||  |||||||| |||||||||||||||||||||| || | |||| |  |||||||||||  ||||||||         |||||||| |    
T  2590928 tctataagtcctaactcaactggaaaatgtcgaaattgcaaggccgaacatcgtgatctgggttcgaaccctggacctcac---------tgagtttaat 2590838  T
Q  420 ttcaatggattaccacttcatct 442  Q
    |||| ||||||||||||||||||    
T  2590837 ttcagtggattaccacttcatct 2590815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 445
Target Start/End: Original strand, 27230683 - 27230792
Alignment:
Q  335 tcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattacca 434  Q
    ||||||| ||||||  |||||||||||||| ||| | ||||||  | ||| ||| || ||  |||||||||||||||| |||| ||||| || |||||||    
T  27230683 tcaactgataaatgctgaaattgcaaggccagacatcgtgacctggattcaaactcgggat-tcacagttgtgtgtgaatttaatttcagtgaattacca 27230781  T
Q  435 cttcatctcag 445  Q
    |||||||||||    
T  27230782 cttcatctcag 27230792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 442
Target Start/End: Complemental strand, 8137726 - 8137638
Alignment:
Q  352 aaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccacttcatct 442  Q
    ||||||||||| |||||||  ||||||  ||| ||| | || ||||||||||||||||  |||||| ||||||||| ||||||||| ||||    
T  8137726 aaattgcaaggtcggacgtcatgacccgagtttgaatctgaaacctcacagttgtgtg--agtttaatttcaatggcttaccactttatct 8137638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 442
Target Start/End: Original strand, 53182750 - 53182856
Alignment:
Q  336 caactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggattaccac 435  Q
    ||||||| |||||  |||||||||||| | |||||||||| || | || ||||  || |||||||| || |||||||||||| ||| |  || |||||||    
T  53182750 caactggcaaatgctgaaattgcaaggtcagacgttgtgatccggatttgaacatgatacctcacaattatgtgtgagtttaattttaggggtttaccac 53182849  T
Q  436 ttcatct 442  Q
    |||||||    
T  53182850 ttcatct 53182856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 378
Target Start/End: Complemental strand, 45686152 - 45686096
Alignment:
Q  322 tagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccc 378  Q
    |||||||| ||| |||||| | ||||| |||||||| |||||||||||| |||||||    
T  45686152 tagaagtcttagctcaactagcaaatgccgaaattgaaaggccggacgtcgtgaccc 45686096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 10101 - 9978
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||||||||||| || |||| |||||||||||| ||||||| ||||||||||||||||||    
T  10101 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcatagttgtgtgtgagtttat 10002  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||||||||||||||||||    
T  10001 tttcagtggattaccacttcatct 9978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 114252 - 114375
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    ||||||||||||||| |||||||| ||||| |||||||| ||||||||||||  ||| || |||||||||||| ||||||||| |||||||||||||||     
T  114252 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttag 114351  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||| ||||||||||||||    
T  114352 tttcagtggtttaccacttcatct 114375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 22174 - 22286
Alignment:
Q  330 ctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttattttcaatggat 429  Q
    |||| |||||||  ||||| |||||||| |||||||||||| ||||||| ||||||| |||| ||||||||||||| ||||||||||| ||||| |||||    
T  22174 ctagctcaactgacaaatgccgaaattgtaaggccggacgtcgtgacccgggttcgagcccgggacctcacagttgcgtgtgagtttaatttcagtggat 22273  T
Q  430 taccacttcatct 442  Q
    |||||||||||||    
T  22274 taccacttcatct 22286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 9071 - 8948
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgagtttat 418  Q
    |||||||||| |||| |||||||||||||| |||||||| ||||| ||||||| |||  | ||||||||||   |||||||||||||||||||||||||     
T  9071 gtctagaagttctagctcaactggtaaatgccgaaattgtaaggcgggacgttatgattcgggttcgaacctaggacctcacagttgtgtgtgagtttaa 8972  T
Q  419 tttcaatggattaccacttcatct 442  Q
    ||||| ||  ||||||||||||||    
T  8971 tttcagtgatttaccacttcatct 8948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 34822 - 34942
Alignment:
Q  323 agaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacagttgtgtgtgag-tttatttt 421  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||| |||||   |||||||| ||  |||||| ||||||| |||||| |||| |||    
T  34822 agaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacatgggttcgaatccaggacctcgcagttgtatgtgagttttaattt 34921  T
Q  422 caatggattaccacttcatct 442  Q
    || ||||||||||||||||||    
T  34922 cagtggattaccacttcatct 34942  T

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Target: scaffold0360 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 402
Target Start/End: Original strand, 14495 - 14578
Alignment:
Q  319 gtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctcacag 402  Q
    ||||| |||||||||  || |||  ||||||||||||||||||||||||||| |||| || |||||||||||| ||||||||||    
T  14495 gtctataagtcctagcacagctgacaaatgtcgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacag 14578  T

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Target: scaffold0495 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 3340 - 3259
Alignment:
Q  318 cgtctagaagtcctagttcaactggtaaatgtcgaaattgcaaggccggacgttgtgaccctggttcgaacccgagacctca 399  Q
    |||||||||||||||| |||||||| ||||  ||||||| ||| || |||| | ||||| | |||||||||||| |||||||    
T  3340 cgtctagaagtcctagctcaactggcaaattccgaaattacaaagctggacttcgtgacacgggttcgaacccgggacctca 3259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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