View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16741_low_49 (Length: 291)

Name: NF16741_low_49
Description: NF16741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16741_low_49
NF16741_low_49
[»] chr1 (40 HSPs)
chr1 (24-271)||(27445496-27445743)
chr1 (24-271)||(1210343-1210590)
chr1 (24-271)||(51441202-51441448)
chr1 (26-271)||(8671518-8671763)
chr1 (26-271)||(32083184-32083429)
chr1 (24-271)||(43240818-43241065)
chr1 (25-271)||(51601656-51601902)
chr1 (24-271)||(49347830-49348078)
chr1 (24-215)||(19936175-19936367)
chr1 (26-222)||(34827541-34827737)
chr1 (26-188)||(30202569-30202731)
chr1 (26-232)||(37463306-37463510)
chr1 (26-140)||(9592463-9592577)
chr1 (88-270)||(32066772-32066951)
chr1 (96-222)||(7921574-7921700)
chr1 (97-222)||(6640773-6640898)
chr1 (45-217)||(51234267-51234438)
chr1 (43-237)||(12807542-12807737)
chr1 (26-160)||(46226721-46226854)
chr1 (24-137)||(22089826-22089939)
chr1 (97-222)||(28528228-28528353)
chr1 (120-238)||(35828926-35829044)
chr1 (87-240)||(52421059-52421210)
chr1 (86-219)||(52739966-52740098)
chr1 (24-118)||(8391521-8391615)
chr1 (45-203)||(21275567-21275725)
chr1 (169-222)||(40419328-40419381)
chr1 (24-69)||(696069-696114)
chr1 (39-209)||(7814126-7814293)
chr1 (31-111)||(9599838-9599918)
chr1 (31-77)||(41560228-41560274)
chr1 (165-231)||(46226890-46226956)
chr1 (88-174)||(52640926-52641012)
chr1 (186-222)||(32405083-32405119)
chr1 (67-209)||(13027007-13027150)
chr1 (26-156)||(11331503-11331633)
chr1 (26-156)||(11489524-11489654)
chr1 (24-70)||(15085733-15085779)
chr1 (121-222)||(3877496-3877597)
chr1 (196-240)||(52641060-52641104)
[»] chr2 (29 HSPs)
chr2 (24-270)||(11992543-11992789)
chr2 (24-271)||(4807190-4807437)
chr2 (26-271)||(2610126-2610371)
chr2 (26-274)||(8180375-8180623)
chr2 (26-232)||(45368063-45368268)
chr2 (24-271)||(452059-452300)
chr2 (25-271)||(38453058-38453303)
chr2 (36-274)||(30743218-30743456)
chr2 (34-271)||(24584053-24584290)
chr2 (30-271)||(41763484-41763733)
chr2 (24-241)||(3244088-3244300)
chr2 (26-271)||(3865670-3865915)
chr2 (26-229)||(13148953-13149156)
chr2 (100-239)||(37281739-37281878)
chr2 (26-168)||(6238193-6238334)
chr2 (30-148)||(41197671-41197792)
chr2 (67-220)||(17581121-17581270)
chr2 (97-213)||(12904624-12904740)
chr2 (100-222)||(33594782-33594904)
chr2 (159-222)||(876779-876842)
chr2 (197-271)||(12475031-12475105)
chr2 (122-216)||(14769943-14770037)
chr2 (153-240)||(36038849-36038936)
chr2 (30-76)||(12734499-12734545)
chr2 (96-169)||(7292688-7292761)
chr2 (31-70)||(16097438-16097477)
chr2 (26-81)||(23997405-23997460)
chr2 (86-220)||(6465370-6465504)
chr2 (125-222)||(7135223-7135320)
[»] chr3 (28 HSPs)
chr3 (30-271)||(25190977-25191218)
chr3 (24-271)||(51448146-51448393)
chr3 (24-271)||(47542148-47542395)
chr3 (30-268)||(27917173-27917411)
chr3 (26-271)||(38849692-38849937)
chr3 (24-213)||(28245093-28245282)
chr3 (26-274)||(29817100-29817347)
chr3 (117-274)||(19757663-19757820)
chr3 (30-192)||(54425349-54425511)
chr3 (150-271)||(52138426-52138547)
chr3 (26-222)||(26489964-26490159)
chr3 (33-222)||(30345178-30345363)
chr3 (45-222)||(48221431-48221608)
chr3 (117-274)||(19736761-19736914)
chr3 (26-138)||(3186500-3186612)
chr3 (24-110)||(52138559-52138645)
chr3 (98-222)||(30724311-30724435)
chr3 (67-219)||(44395080-44395227)
chr3 (30-80)||(40674556-40674606)
chr3 (26-81)||(5168616-5168671)
chr3 (165-207)||(9258541-9258583)
chr3 (161-219)||(32490298-32490356)
chr3 (96-222)||(46145800-46145926)
chr3 (39-219)||(15750888-15751068)
chr3 (159-222)||(1470669-1470732)
chr3 (209-274)||(19757579-19757644)
chr3 (197-246)||(43111626-43111675)
chr3 (24-52)||(43695202-43695230)
[»] chr7 (34 HSPs)
chr7 (24-270)||(33350243-33350489)
chr7 (25-271)||(46356289-46356535)
chr7 (24-271)||(36651592-36651839)
chr7 (24-274)||(31004819-31005068)
chr7 (26-271)||(38606604-38606848)
chr7 (26-246)||(11593583-11593803)
chr7 (24-271)||(37616514-37616761)
chr7 (24-271)||(39906812-39907063)
chr7 (26-270)||(36869728-36869972)
chr7 (26-271)||(32630205-32630438)
chr7 (26-271)||(48918986-48919231)
chr7 (101-271)||(49028865-49029035)
chr7 (106-271)||(24177714-24177879)
chr7 (24-182)||(35906638-35906796)
chr7 (24-156)||(43281389-43281521)
chr7 (26-157)||(33072666-33072797)
chr7 (40-222)||(43793496-43793675)
chr7 (26-171)||(24425960-24426105)
chr7 (24-124)||(34869165-34869265)
chr7 (88-222)||(21517826-21517959)
chr7 (39-173)||(23087554-23087688)
chr7 (42-132)||(7189687-7189777)
chr7 (24-81)||(12841712-12841769)
chr7 (96-222)||(24550198-24550319)
chr7 (24-129)||(7272780-7272884)
chr7 (136-216)||(18608239-18608319)
chr7 (136-216)||(18626559-18626639)
chr7 (136-216)||(18637233-18637313)
chr7 (136-216)||(18650668-18650748)
chr7 (26-106)||(23404181-23404261)
chr7 (136-208)||(5843105-5843177)
chr7 (66-181)||(418888-419002)
chr7 (88-134)||(33139006-33139052)
chr7 (45-82)||(12965813-12965850)
[»] chr6 (21 HSPs)
chr6 (25-271)||(10100295-10100541)
chr6 (26-270)||(5631416-5631661)
chr6 (24-271)||(9706374-9706621)
chr6 (26-270)||(5258589-5258833)
chr6 (24-271)||(20428073-20428320)
chr6 (24-212)||(2689313-2689501)
chr6 (43-274)||(33495802-33496023)
chr6 (61-204)||(26291444-26291587)
chr6 (64-239)||(27790786-27790961)
chr6 (26-146)||(6056209-6056329)
chr6 (58-190)||(6641881-6642013)
chr6 (24-126)||(607902-608004)
chr6 (158-240)||(3632645-3632727)
chr6 (26-123)||(30679220-30679317)
chr6 (26-110)||(14030565-14030649)
chr6 (26-132)||(2065195-2065302)
chr6 (201-271)||(30670486-30670556)
chr6 (43-108)||(12134357-12134421)
chr6 (136-202)||(7079801-7079867)
chr6 (126-192)||(13674570-13674636)
chr6 (67-156)||(19338458-19338547)
[»] chr5 (31 HSPs)
chr5 (24-271)||(1274863-1275110)
chr5 (24-274)||(3394306-3394558)
chr5 (24-271)||(12492824-12493071)
chr5 (25-271)||(3301447-3301693)
chr5 (24-271)||(10638895-10639142)
chr5 (24-274)||(2075911-2076161)
chr5 (24-271)||(24178122-24178369)
chr5 (24-271)||(1288026-1288273)
chr5 (26-271)||(28977296-28977541)
chr5 (28-271)||(20318589-20318828)
chr5 (88-270)||(16347904-16348085)
chr5 (26-246)||(36200405-36200625)
chr5 (45-222)||(43558272-43558449)
chr5 (26-141)||(27622-27737)
chr5 (58-239)||(27302421-27302599)
chr5 (134-271)||(17341748-17341885)
chr5 (24-133)||(34272758-34272867)
chr5 (96-162)||(43423582-43423648)
chr5 (140-222)||(6368478-6368560)
chr5 (150-222)||(3096829-3096901)
chr5 (136-222)||(21915533-21915619)
chr5 (137-222)||(25937719-25937804)
chr5 (67-159)||(20077297-20077389)
chr5 (48-232)||(37124207-37124391)
chr5 (26-69)||(16347817-16347860)
chr5 (150-216)||(38579064-38579130)
chr5 (56-133)||(28676330-28676407)
chr5 (134-217)||(35685507-35685590)
chr5 (129-218)||(14099971-14100061)
chr5 (42-132)||(16779419-16779509)
chr5 (89-145)||(28676253-28676308)
[»] chr4 (40 HSPs)
chr4 (24-271)||(435827-436074)
chr4 (24-271)||(23906738-23906985)
chr4 (24-271)||(33226807-33227054)
chr4 (24-274)||(31960251-31960501)
chr4 (26-271)||(27450612-27450857)
chr4 (24-271)||(1777452-1777699)
chr4 (24-271)||(48174530-48174777)
chr4 (24-271)||(48622964-48623211)
chr4 (24-271)||(53707392-53707639)
chr4 (24-271)||(56374888-56375135)
chr4 (26-266)||(16002532-16002771)
chr4 (26-215)||(50286625-50286814)
chr4 (29-271)||(39708055-39708298)
chr4 (26-270)||(47265641-47265887)
chr4 (26-214)||(1211829-1212017)
chr4 (45-222)||(39754829-39755006)
chr4 (24-144)||(43433643-43433763)
chr4 (24-160)||(46583261-46583397)
chr4 (86-220)||(54787744-54787878)
chr4 (143-218)||(10775975-10776050)
chr4 (45-222)||(17666496-17666670)
chr4 (29-180)||(54914631-54914781)
chr4 (26-163)||(35690016-35690147)
chr4 (96-216)||(1629084-1629204)
chr4 (96-222)||(7092721-7092847)
chr4 (136-222)||(30807245-30807331)
chr4 (89-219)||(55578687-55578814)
chr4 (126-220)||(42037510-42037604)
chr4 (26-156)||(41009789-41009922)
chr4 (39-195)||(52280650-52280806)
chr4 (103-240)||(17667845-17667979)
chr4 (97-240)||(41427468-41427610)
chr4 (59-193)||(3273098-3273232)
chr4 (120-221)||(20917630-20917731)
chr4 (154-219)||(30853066-30853131)
chr4 (67-159)||(8917807-8917899)
chr4 (88-148)||(45185482-45185542)
chr4 (153-232)||(55768943-55769022)
chr4 (153-232)||(55833199-55833278)
chr4 (26-64)||(52569954-52569992)
[»] chr8 (34 HSPs)
chr8 (28-274)||(36544747-36544993)
chr8 (24-241)||(36565678-36565895)
chr8 (26-271)||(4032933-4033178)
chr8 (24-271)||(12492279-12492526)
chr8 (24-246)||(42854441-42854663)
chr8 (24-271)||(8879871-8880118)
chr8 (25-271)||(15215709-15215954)
chr8 (62-232)||(13984672-13984841)
chr8 (26-248)||(18124799-18125018)
chr8 (31-156)||(25439249-25439374)
chr8 (25-239)||(29735447-29735653)
chr8 (67-246)||(28300588-28300764)
chr8 (86-220)||(19293779-19293913)
chr8 (70-270)||(33830716-33830913)
chr8 (30-217)||(30113640-30113827)
chr8 (31-156)||(25299950-25300075)
chr8 (126-222)||(25985189-25985283)
chr8 (43-144)||(37077490-37077591)
chr8 (97-222)||(38667206-38667329)
chr8 (33-197)||(6510862-6511028)
chr8 (122-222)||(41444838-41444939)
chr8 (39-222)||(13589087-13589270)
chr8 (31-156)||(25288613-25288740)
chr8 (24-124)||(39946602-39946702)
chr8 (121-222)||(18849656-18849750)
chr8 (24-70)||(36395390-36395436)
chr8 (139-217)||(45332039-45332117)
chr8 (45-108)||(10824546-10824609)
chr8 (43-81)||(16916974-16917012)
chr8 (177-222)||(43732234-43732279)
chr8 (26-70)||(2796354-2796398)
chr8 (45-190)||(38328265-38328406)
chr8 (67-114)||(43732359-43732406)
chr8 (45-82)||(15853938-15853975)
[»] scaffold0570 (1 HSPs)
scaffold0570 (24-232)||(2707-2915)
[»] scaffold0018 (1 HSPs)
scaffold0018 (24-271)||(31066-31313)
[»] scaffold0113 (1 HSPs)
scaffold0113 (24-268)||(12035-12279)
[»] scaffold0024 (1 HSPs)
scaffold0024 (26-241)||(82349-82564)
[»] scaffold0171 (1 HSPs)
scaffold0171 (150-246)||(5815-5911)
[»] scaffold0045 (2 HSPs)
scaffold0045 (44-182)||(87066-87204)
scaffold0045 (178-274)||(88514-88610)
[»] scaffold1493 (1 HSPs)
scaffold1493 (31-156)||(29-156)
[»] scaffold0008 (1 HSPs)
scaffold0008 (45-213)||(48405-48574)
[»] scaffold0606 (1 HSPs)
scaffold0606 (126-222)||(9304-9400)


Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 27445743 - 27445496
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||||    
T  27445743 gctgcccgatagaactttcctttcaatttaagtggtactttcttatcacataaaacactcggaactcttctccatttcaaccaaccaacttgaatacgat 27445644  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27445643 gatttacatctgcttctatttctccatcattttgtactatggacccaacataattaaaccgtgtaacttggggtatgataagatctccaactttcacctg 27445544  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  27445543 caaggtaaagctacttcttctttgactaaagttacattccatatactc 27445496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 1210590 - 1210343
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacac-tcgggactcttctacatttcaaccacccaacttaaatacga 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||| || || ||||||| ||||||||||||||| ||| |||||||    
T  1210590 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctcagg-ctcttcttcatttcaaccacccagcttgaatacga 1210492  T
Q  123 tgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||  |||||||||||| ||||||||||||||||||||| | |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  1210491 tggcttacatctgcttttatttctccatcattttgtacgaaagacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacct 1210392  T
Q  223 gcaaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
     ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  1210391 ccaaggtagacctacttctccttccgctgaagttacattccatatactc 1210343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 51441202 - 51441448
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| | | ||||||| ||||||||||||||| ||| |||| |||    
T  51441202 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgca-aaaacacttgaggctcttctccatttcaaccacccagcttgaatatgat 51441300  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  ||| |||||||||||||||||| ||||||||||  | |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||     
T  51441301 ggcttagatctgcttctatttctccgtcattttgtatgaaagacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacctt 51441400  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  51441401 caaggtagacctacttctccttccgctgaagttacattccatatactc 51441448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 26 - 271
Target Start/End: Complemental strand, 8671763 - 8671518
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||| ||||||||| ||| ||||||||||    
T  8671763 tgtctgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgagtctcttctccattttaaccacccagcttgaatacgatga 8671664  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
     |||||||||||||||||||| | ||||||||||| |  ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  8671663 cttacatctgcttctatttcttcgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttagggtatgatatgatctccaactttcacctcca 8671564  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||| |||||||| |||   ||  |||||||||||||||||||    
T  8671563 aggtagacctacttctccttctgctgaagttacattccatatactc 8671518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 26 - 271
Target Start/End: Original strand, 32083184 - 32083429
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||| |||| |||||  | | ||||||| ||||||||||||||| ||| ||||||||||    
T  32083184 tgtctgatagaactttcctttcagcttaagtggtactttcttatcgcatagaacacctgaggctcttctccatttcaaccacccagcttgaatacgatga 32083283  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    ||||||| ||| ||||||||||| |||||||||||||| ||||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||| ||    
T  32083284 tttacatttgcctctatttctccgtcattttgtactatggacccaagatatttaaattgtgcaacttggggtatgatatgatctccaactttcacctcca 32083383  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||| | |||||| ||||  ||  |||||||||||||||||||    
T  32083384 aggtagacccacttctccttttgctgaagttacattccatatactc 32083429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 43240818 - 43241065
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  || |||||||  | | ||||||| ||||||||||||||| ||| |||| |||    
T  43240818 gctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgat 43240917  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  ||||||||||||| |||||||| ||||||||||| |  || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  43240918 ggcttacatctgcttccatttctccgtcattttgtacgaaggatccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 43241017  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  43241018 caaggtagatctacttctccttccgctgaagttacattccatatactc 43241065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 25 - 271
Target Start/End: Complemental strand, 51601902 - 51601656
Alignment:
Q  25 ctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatg 124  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||  | |||||||  | |||||||||  ||||| |||||||| ||| |||||||||    
T  51601902 ctgtccgatagaactttcatttcaacttaaggggtactttcttatcgaacaaaacacctgagactcttctctatttccaccacccagcttgaatacgatg 51601803  T
Q  125 atttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgc 224  Q
      |||||||||||||||||||||| ||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  51601802 gcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 51601703  T
Q  225 aaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    |||||||| |||||||| |||   ||  |||||||||||||||||||    
T  51601702 aaggtagacctacttctccttccgctgaagttacattccatatactc 51601656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 49347830 - 49348078
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  49347830 gctgtccgatagatttttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 49347929  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaacc-gtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    |  ||||| |||||||||||||||| ||||||||||| |  ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  49347930 ggcttacacctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccagtgtaacttggggtatgatatgatctccaactttcacct 49348029  T
Q  223 gcaaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
     ||||||||| |||||||| |||   ||  |||||||||| ||||||||    
T  49348030 ccaaggtagacctacttctccttccgctgaagttacattcgatatactc 49348078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 19936367 - 19936175
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    ||||||||||| || ||| ||||||  ||||| |||||||||||||||||||||||||| | |  |||| | ||||||||||||||| ||| ||||||||    
T  19936367 gctgtccgatataattttcctttcattttaagcggtactttcttatcacataaaacacttgaggttcttatccatttcaaccacccagcttgaatacgat 19936268  T
Q  124 gatttacatctgcttctatttctccatca-ttttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaact 215  Q
    ||||||||| ||||||||||||||| ||| ||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  19936267 gatttacatatgcttctatttctccttcatttttgtattatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaact 19936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 222
Target Start/End: Original strand, 34827541 - 34827737
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    ||||| ||| || ||| ||||||| |||||  ||||||||||||||||||||||||  | | ||||||| |||||||||||  |||||| ||||| ||||    
T  34827541 tgtccaatataattttcctttcaatttaagcagtactttcttatcacataaaacacatgaggctcttctccatttcaaccattcaacttgaatacaatga 34827640  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||||| ||||||||||    
T  34827641 tttacatatgcttctatttctccgtcattttgtactatggacccaagatatttaaaccttgtaacttagggtatgatatgatctcccactttcacct 34827737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 30202569 - 30202731
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||  ||| |||||||||     
T  30202569 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccggcttgaatacgatgg 30202668  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgta 188  Q
     |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||    
T  30202669 cttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgta 30202731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 26 - 232
Target Start/End: Original strand, 37463306 - 37463510
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||| ||||||| ||| ||||||||||||   || |||||||||||| ||| || ||  || ||||||| ||| ||||||||| | ||||||||| ||||    
T  37463306 tgtctgatagaattttcctttcaacttaatcagtgctttcttatcacctaacac-ctaagg-ctcttctccatatcaaccacctagcttaaatacaatga 37463403  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    | ||||||||||||||||||||| |||||||||||||| ||| ||||||| |||||| |||||||| || ||||||||||||||||||||||||||| ||    
T  37463404 tatacatctgcttctatttctccgtcattttgtactatggactcaagatatttaaactgtgtaactcggagtatgatatgatctccaactttcacctcca 37463503  T
Q  226 aggtaga 232  Q
    |||||||    
T  37463504 aggtaga 37463510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 9592577 - 9592463
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || ||||||| || ||||||||| ||||||||||||||||||| |||||||||     
T  9592577 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacccgagactcttctccatttcaaccacccaacttgaatacgatgg 9592478  T
Q  126 tttacatctgcttct 140  Q
     |||| |||||||||    
T  9592477 cttacctctgcttct 9592463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 270
Target Start/End: Original strand, 32066772 - 32066951
Alignment:
Q  88 ctcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgt 187  Q
    ||||||| ||||| ||||| ||||||| ||||||||||||||||| ||||| ||||||||  ||||||||||||||  |||||| ||| |||||| ||||    
T  32066772 ctcttctccattttaaccatccaacttgaatacgatgatttacatttgcttttatttctctgtcattttgtactatgaacccaaaatatttaaactgtgt 32066871  T
Q  188 aacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttcttctttgactagagttacattccatatact 270  Q
    |||||   |||||||||||||||||| ||||||||  |||||||| |||||||  ||||  ||| | ||||||| ||||||||    
T  32066872 aactt---gtatgatatgatctccaattttcacctctaaggtagaactacttcaccttttgctaaaattacattacatatact 32066951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 96 - 222
Target Start/End: Complemental strand, 7921700 - 7921574
Alignment:
Q  96 catttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggg 195  Q
    ||||||||| ||||||||| ||| ||||| ||||||||| |||||||||||| ||| ||||||||||| || ||||||||  |||| ||||||||||| |    
T  7921700 catttcaacaacccaacttgaattcgatggtttacatctccttctatttctcaatcgttttgtactatggatccaagatatataaatcgtgtaacttgtg 7921601  T
Q  196 gtatgatatgatctccaactttcacct 222  Q
    ||| |||||||||||||||||||||||    
T  7921600 gtaagatatgatctccaactttcacct 7921574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 6640898 - 6640773
Alignment:
Q  97 atttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttgggg 196  Q
    ||||||||||||||||||  || | ||| |||||| || ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||    
T  6640898 atttcaaccacccaacttggatccaatggtttacacctccttctatttctccataattttgtactatagactcaagatatttaaaccgtgtaacttgtgg 6640799  T
Q  197 tatgatatgatctccaactttcacct 222  Q
    | | |||||||||| |||||||||||    
T  6640798 tgtaatatgatctctaactttcacct 6640773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 51234438 - 51234267
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctattt 144  Q
    |||||||| || ||| ||||| |||||||||||| ||  | | || |||| ||||||||||||||||||| |||  ||||||||||||||||||| ||||    
T  51234438 ttcaacttgagcggtgctttcgtatcacataaaagacctgaggctattctccatttcaaccacccaacttgaatttgatgatttacatctgcttcaattt 51234339  T
Q  145 ctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaacttt 217  Q
    ||||||||||||| ||||| ||| ||||||| ||||||  || ||||| |  |||||||||||||||||||||    
T  51234338 ctccatcattttgcactatggactcaagatatttaaactatgaaactt-gtttatgatatgatctccaacttt 51234267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 12807542 - 12807737
Alignment:
Q  43 ctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaa-ccacccaacttaaatacgatgatttacatctgcttcta 141  Q
    |||||||||| |||||||||||| |||||||||| ||| | | | ||||||| |||||||| ||||| |   ||||| |||||||||||||| |||||||    
T  12807542 ctttcaacttgagtggtactttcatatcacataagacattagaggctcttctccatttcaaaccacctagaataaattcgatgatttacatcagcttcta 12807641  T
Q  142 tttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctac 237  Q
    ||||| | || |||| |||||| || |||||||| |||||  ||||||||||  |||||||| ||||  ||||||||||||  |||||||| ||||    
T  12807642 tttcttcgtcgttttatactatggatccaagatatttaaattgtgtaacttgtagtatgatacgatcctcaactttcacctctaaggtagaactac 12807737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 46226721 - 46226854
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||| ||||||| |||||||||||||||||   |||||||||| ||||||||||||| |   ||||||| ||||||||||| ||||||| ||||| || |    
T  46226721 tgtctgatagaatttttctttcaacttaagcactactttcttagcacataaaacacttgatgctcttctccatttcaaccatccaacttgaatacaat-a 46226819  T
Q  126 tttacatctgcttctatttctccatcattttgtac 160  Q
    ||||||||||||| | |||||||||||||||||||    
T  46226820 tttacatctgcttttgtttctccatcattttgtac 46226854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 22089939 - 22089826
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||  || ||||||   | ||||||||| ||||||||||||||| ||| ||||||||    
T  22089939 gctgtccgatagaactttcctttcaacttaagtggtattttcttattgcacaaaacatctgagactcttctccatttcaaccacccagcttgaatacgat 22089840  T
Q  124 gatttacatctgct 137  Q
    || |||||||||||    
T  22089839 gacttacatctgct 22089826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 28528353 - 28528228
Alignment:
Q  97 atttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttgggg 196  Q
    |||||||||||||| ||   || ||||| |||||| || |||||||||||||||  |||||||  |||||||||||||| |||||| |||||||||| ||    
T  28528353 atttcaaccacccagctcggattcgatggtttacacctccttctatttctccattgttttgtaacatagacccaagatatttaaactgtgtaacttgtgg 28528254  T
Q  197 tatgatatgatctccaactttcacct 222  Q
    |||| |||||||||||||||||||||    
T  28528253 tatgctatgatctccaactttcacct 28528228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 35828926 - 35829044
Alignment:
Q  120 cgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttca 219  Q
    ||||||||||||| ||||||||||||||| ||  |||||||||| ||||||||||  |||| | | |||||||| |||||||||||||||| | ||||||    
T  35828926 cgatgatttacatatgcttctatttctccgtcgctttgtactatggacccaagatgtttaagcagcgtaacttgtggtatgatatgatctctagctttca 35829025  T
Q  220 cctgcaaggtagagctact 238  Q
    ||| ||||||||| |||||    
T  35829026 cctccaaggtagaactact 35829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 52421210 - 52421059
Alignment:
Q  87 actcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtg 186  Q
    ||||||||  |||||||||||||||||| ||| |||||||| |||| ||||| |||||||   || |||||||||| ||||||||| || ||||||  ||    
T  52421210 actcttctctatttcaaccacccaacttgaattcgatgattaacatatgcttttatttctatgtc-ttttgtactaaagacccaagctatttaaact-tg 52421113  T
Q  187 taacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttc 240  Q
    ||||||| || ||||||||||||| |||||||||||  ||||||||| ||||||    
T  52421112 taacttgtggcatgatatgatctctaactttcacctataaggtagagatacttc 52421059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 52739966 - 52740098
Alignment:
Q  86 gactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgt 185  Q
    ||||||||| ||||||||||| ||||||| | || ||||| |||||||| ||||||||||||| ||| ||||||||||||  |||| ||| | |||||||    
T  52739966 gactcttctccatttcaaccatccaacttgagtaagatgacttacatctacttctatttctccgtcactttgtactataggtccaaaatattcaaaccgt 52740065  T
Q  186 gtaacttggggtatgatatgatctccaactttca 219  Q
    | |||||   | ||||||||||||||||||||||    
T  52740066 gcaactt-aagcatgatatgatctccaactttca 52740098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 8391615 - 8391521
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaat 118  Q
    ||||||||||| ||| || |||| | ||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| |||||||    
T  8391615 gctgtccgataaaacattcctttaagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttaaat 8391521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 203
Target Start/End: Complemental strand, 21275725 - 21275567
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctattt 144  Q
    |||| |||||||||||||||||||||| ||||| |||  | |||||||||  ||||||||||| || |||  || | ||||||||||||  ||| ||| |    
T  21275725 ttcagcttaagtggtactttcttatcaaataaagcacatgagactcttctttatttcaaccactcagcttggattcaatgatttacatcaacttttatat 21275626  T
Q  145 ctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgata 203  Q
    |||  || ||||| ||||| ||||||||||| |||||| | |||| ||  |||||||||    
T  21275625 ctctgtcgttttgcactatcgacccaagatatttaaacagagtaatttatggtatgata 21275567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 40419381 - 40419328
Alignment:
Q  169 caagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||| |||||| |||||||||| ||||||||||||||||||||||||||||    
T  40419381 caagatatttaaactgtgtaacttgtggtatgatatgatctccaactttcacct 40419328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 696114 - 696069
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttat 69  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||    
T  696114 gctgtccgatagaactttcctttcagcttaagtggtactttcttat 696069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 7814293 - 7814126
Alignment:
Q  39 ttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgctt 138  Q
    ||||| |||||||| || |||| |||| |||||||||||||||| | ||||||||  ||||||||||||   | || ||| | | |||||||   || ||    
T  7814293 ttttccttcaacttgagcggtattttcatatcacataaaacacttgagactcttcctcatttcaaccac---atttgaatgcaacgatttactcatgttt 7814197  T
Q  139 ctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatct 209  Q
     ||||||||||||||||||||||||  ||| || |   ||| ||||| | ||||| |||||||||||||||    
T  7814196 ttatttctccatcattttgtactatgaaccaaatacttttagaccgtttcacttgcggtatgatatgatct 7814126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 9599838 - 9599918
Alignment:
Q  31 gatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaa 111  Q
    ||||||| |||  |||||||| ||| |||||||||||||||||||||||||| | | ||||| | ||||| ||||||||||    
T  9599838 gatagaattttcatttcaactgaagcggtactttcttatcacataaaacacttgaggctcttatccatttaaaccacccaa 9599918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 41560274 - 41560228
Alignment:
Q  31 gatagaacttttctttcaacttaagtggtactttcttatcacataaa 77  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  41560274 gatagaattttcctttcaacttaagcggtactttcttatcacataaa 41560228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 46226890 - 46226956
Alignment:
Q  165 gacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtag 231  Q
    ||||||||||| |||||||||||||||   |||||| ||||||||||||||| ||||| ||| ||||    
T  46226890 gacccaagatatttaaaccgtgtaactcaaggtatggtatgatctccaacttgcacctccaaagtag 46226956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 52640926 - 52641012
Alignment:
Q  88 ctcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagat 174  Q
    ||||||| ||||||||| |  |||||| |||||||| |||||||| ||||| ||| ||||  ||||||||||| ||| |||||||||    
T  52640926 ctcttcttcatttcaacaattcaacttgaatacgataatttacatatgcttttatctctctgtcattttgtaccataaacccaagat 52641012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 32405083 - 32405119
Alignment:
Q  186 gtaacttggggtatgatatgatctccaactttcacct 222  Q
    |||||||||||||||||||||||||||||||| ||||    
T  32405083 gtaacttggggtatgatatgatctccaactttaacct 32405119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 13027007 - 13027150
Alignment:
Q  67 tatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctcca-tcattttgtactatag 165  Q
    ||||||||||||||  |  ||||||||| ||||| |||||||||||||  ||   | ||||||||| ||||||||| |||||| |  ||||||| ||||     
T  13027007 tatcacataaaacatacaagactcttctccatttaaaccacccaacttgtattgaaggatttacatatgcttctatgtctccattgtttttgtattatat 13027106  T
Q  166 acccaagataattaaaccgtgtaacttggggtatgatatgatct 209  Q
    | | |||||| |||||| | ||||||||   |||||||||||||    
T  13027107 atctaagatacttaaacagagtaacttgtaatatgatatgatct 13027150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 11331503 - 11331633
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||| |||| || ||| ||||||||||||   |||| || ||||||||||||||||    | |  |||| ||||| ||||| ||||||||||  || | |    
T  11331503 tgtctgatataattttcctttcaacttaatcagtacatttttatcacataaaacacctacggccattctccatttaaaccatccaacttaaaagcggtaa 11331602  T
Q  126 tttacatctgcttctatttctccatcatttt 156  Q
    ||||||||||||||||||||||  |||||||    
T  11331603 tttacatctgcttctatttctctgtcatttt 11331633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 11489524 - 11489654
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||| |||| || ||| ||||||||||||   |||| || ||||||||||||||||    | |  |||| ||||| ||||| ||||||||||  || | |    
T  11489524 tgtctgatataattttcctttcaacttaatcagtacatttttatcacataaaacacctacggccattctccatttaaaccatccaacttaaaagcggtaa 11489623  T
Q  126 tttacatctgcttctatttctccatcatttt 156  Q
    ||||||||||||||||||||||  |||||||    
T  11489624 tttacatctgcttctatttctctgtcatttt 11489654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 15085779 - 15085733
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatc 70  Q
    |||||| ||||||||||| |||||| |||||||||| ||||||||||    
T  15085779 gctgtctgatagaactttcctttcagcttaagtggtgctttcttatc 15085733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 3877597 - 3877496
Alignment:
Q  121 gatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcac 220  Q
    ||||| ||| || |||||||||||||||||| |||| || ||| |||||| |||| |||||  |||||| ||| |  ||||||| |||||||| ||| ||    
T  3877597 gatgaattatatttgcttctatttctccatcgttttatattatggacccatgatatttaaattgtgtaatttgtgaaatgatataatctccaatttttac 3877498  T
Q  221 ct 222  Q
    ||    
T  3877497 ct 3877496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 52641060 - 52641104
Alignment:
Q  196 gtatgatatgatctccaactttcacctgcaaggtagagctacttc 240  Q
    |||||||||||||||||||||||||||  ||||| || |||||||    
T  52641060 gtatgatatgatctccaactttcacctctaaggtcgaactacttc 52641104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 163; Significance: 4e-87; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 24 - 270
Target Start/End: Original strand, 11992543 - 11992789
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  11992543 gctgtccgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 11992642  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  11992643 gatttacatctgcttctatttctccatcattttgtactatagacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 11992742  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatact 270  Q
     |||||||| | ||||||  ||| |||  ||||||||||||||||||    
T  11992743 taaggtagacccacttctctttttactgaagttacattccatatact 11992789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 4807437 - 4807190
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || |||||||  | ||||||||| ||||||||||||||| ||| ||||||||    
T  4807437 gctgtccgatagaactttcctttcaacttaaatggtactttcttatcgcacaaaacacctgagactcttctccatttcaaccacccatcttgaatacgat 4807338  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| | |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||     
T  4807337 ggcttacatctgcttctatttctccgtcattttgtacgaaagacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacctc 4807238  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||  |||  |||||||||||||||||||    
T  4807237 caaggtagacctacttctccttccactgaagttacattccatatactc 4807190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 271
Target Start/End: Complemental strand, 2610371 - 2610126
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  | | ||||||| ||||||||||||||| ||| |||| ||||     
T  2610371 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcataaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatgg 2610272  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    ||||||||||||||||||||||  ||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2610271 tttacatctgcttctatttctctgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcca 2610172  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||| |||||||| |||   ||  ||||||||| |||||||||    
T  2610171 aggtagacctacttctccttctgctgaagttacatttcatatactc 2610126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 8180623 - 8180375
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || ||||| || | | ||||||| ||||||||||||||| ||| |||||||||     
T  8180623 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaactcttgaggctcttctccatttcaaccacccagcttgaatacgatgg 8180524  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
     |||||||||||||||||||||| ||||||| ||  |  ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  8180523 cttacatctgcttctatttctccgtcattttataagaaggacccaaaatatttaaaccgtgtaacttggagtatgatatgatctccaactttcacctcca 8180424  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    ||||||| |||||||| |||  |||  | ||||||||||||||||||||    
T  8180423 aggtagacctacttctccttccactgaaattacattccatatactctgt 8180375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 26 - 232
Target Start/End: Original strand, 45368063 - 45368268
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||| || |||||||  | ||||||||| ||||||||||||||| ||| |||||||| |    
T  45368063 tgtccgataaaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgataa 45368162  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| ||    
T  45368163 tttacatctgcttctatttctccatcattttgtattatggacccaagatatttaaaccgtgtaa-tttgggtatgatatgatctccaactttcacctcca 45368261  T
Q  226 aggtaga 232  Q
    |||||||    
T  45368262 aggtaga 45368268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 452059 - 452300
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  452059 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 452158  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||      ||||     
T  452159 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctcca------acctc 452252  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  452253 caaggtagacctacttctccttccgctgaagttacattccatatactc 452300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 25 - 271
Target Start/End: Original strand, 38453058 - 38453303
Alignment:
Q  25 ctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatg 124  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| |||| ||||    
T  38453058 ctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccagcttgaatatgatg 38453157  T
Q  125 atttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgc 224  Q
      |||||| ||||||||||||||| ||||||||||  |  ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |    
T  38453158 gcttacatatgcttctatttctccgtcattttgtatgaaggacccaagatatttaaatcgtgtaacttggggtatgatatgatctccaactttcacctcc 38453257  T
Q  225 aaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    |||||||| |||||||| |||   ||   ||||||||||||||||||    
T  38453258 aaggtaga-ctacttctccttccgctgatgttacattccatatactc 38453303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 36 - 274
Target Start/End: Complemental strand, 30743456 - 30743218
Alignment:
Q  36 aacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctg 135  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||  | | |||||||  ||||||| ||| || ||| |||||||||||||| ||||     
T  30743456 aactttcctttcaacttaagtggtactttcttatcacacaaaacacatgaggctcttctcaatttcaatcactcagcttgaatacgatgatttatatcta 30743357  T
Q  136 cttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagct 235  Q
    ||||||||| ||| |||||||||||||| |||| |||||| ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| |     
T  30743356 cttctatttatccgtcattttgtactattgacctaagatatttaaaccgtgtaacttgggatatggtatgatctccaactttcacctccaaggtagacca 30743257  T
Q  236 acttcttctttgactagagttacattccatatactctgt 274  Q
    | |||| ||||  ||  ||||||||||||||||||||||    
T  30743256 atttctccttttgctgaagttacattccatatactctgt 30743218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 34 - 271
Target Start/End: Original strand, 24584053 - 24584290
Alignment:
Q  34 agaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatc 133  Q
    ||||||||||||||||||||||||||| |||||| || || ||||||| || | || |||| |||||| |||||||| ||| |||| ||||  ||| |||    
T  24584053 agaacttttctttcaacttaagtggtattttcttttcgcacaaaacacacgaggctattctccatttccaccacccagcttgaatatgatggcttaaatc 24584152  T
Q  134 tgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagag 233  Q
    ||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||     
T  24584153 tgcctatatttctccatcattttgtactatggacccaagatatttaaaccgtgtaacttgcggtctgatatgatctccaactttcacctccaaggtagac 24584252  T
Q  234 ctacttcttctttgactagagttacattccatatactc 271  Q
     || |||| ||||  ||  |||||||||||||||||||    
T  24584253 ataattctccttttgctgaagttacattccatatactc 24584290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 30 - 271
Target Start/End: Original strand, 41763484 - 41763733
Alignment:
Q  30 cgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttc--------aaccacccaacttaaatacg 121  Q
    |||||||||||| |||| | ||||||||||||||||||||| || |||||||  | | ||||||| ||||||        ||||||||| ||| ||||||    
T  41763484 cgatagaactttccttttagcttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaagttttcaaccacccagcttgaatacg 41763583  T
Q  122 atgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacc 221  Q
    |||||||||||||||||||||||||||  ||||||||||||| ||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||    
T  41763584 atgatttacatctgcttctatttctccgacattttgtactatggacccaagatatttaaatcgtgcaacttggggtatgatataatctccaactttcacc 41763683  T
Q  222 tgcaaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    | ||||||||| | |||||| ||||  ||  |||||||||||||||||||    
T  41763684 tccaaggtagacccacttctccttttgctgaagttacattccatatactc 41763733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 24 - 241
Target Start/End: Original strand, 3244088 - 3244300
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||| || |||||||  | | ||| ||| |||||| |||||||| ||| ||||||||    
T  3244088 gctgtccgatagaactttcctttcaacataagtggtactttcttatcgcacaaaacacctgaggctcatctccatttctaccacccagcttgaatacgat 3244187  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||     |||||||||| ||||||||||||     
T  3244188 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttgg-----gatatgatcttcaactttcacctc 3244282  T
Q  224 caaggtagagctacttct 241  Q
    ||||||||| ||||||||    
T  3244283 caaggtagacctacttct 3244300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 26 - 271
Target Start/End: Complemental strand, 3865915 - 3865670
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||   | | ||||||| ||||||||||||||| ||| ||||||||      
T  3865915 tgtccgatagaactttcctttcaacttaagtagtactttcttatcacacaaaacatctgaggctcttctccatttcaaccacccagcttgaatacgatag 3865816  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
     |||||| ||||||||||||||| ||||||||||| |  |||||||| || | ||||||||||||||||| ||  |||||||||||||||||||||| ||    
T  3865815 cttacatttgcttctatttctccgtcattttgtacgaaggacccaagttattgaaaccgtgtaacttgggatacaatatgatctccaactttcacctcca 3865716  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    |||||||  ||||||| |||   ||  ||||||||| |||||||||    
T  3865715 aggtagacgtacttctccttccgctgaagttacatttcatatactc 3865670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 13149156 - 13148953
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    ||||| ||| || ||| |||| ||||| |||||||||||||||||| || ||||||  |   ||||||| ||||||||||| ||||||| ||||||||||    
T  13149156 tgtccaatataattttccttttaacttgagtggtactttcttatcatatgaaacacctgaagctcttcttcatttcaaccatccaacttgaatacgatga 13149057  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    |||  |||| ||||||||||||| |||||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13149056 tttgtatctacttctatttctccgtcattttgtactatggacctgagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcca 13148957  T
Q  226 aggt 229  Q
    ||||    
T  13148956 aggt 13148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 37281878 - 37281739
Alignment:
Q  100 tcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtat 199  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||||| |||||| || | |||||| |||||  ||||||||||||||||    
T  37281878 tcaaccacccaacttgaataggatgatttacatctacttctatttctccttcattttatactatggagctaagatatttaaaatgtgtaacttggggtat 37281779  T
Q  200 gatatgatctccaactttcacctgcaaggtagagctactt 239  Q
    || |||||||| ||||||||||| ||||||||| ||||||    
T  37281778 gacatgatctcaaactttcacctccaaggtagaactactt 37281739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 6238193 - 6238334
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||| |||  ||||||||||||||||| ||| |||||||| |||||||  | | ||||||| ||||||||||| ||||||| ||||||||||    
T  6238193 tgtccgatagaattttcttttcaacttaagtggtatttt-ttatcacacaaaacacatgaggctcttctccatttcaaccatccaacttgaatacgatga 6238291  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacc 168  Q
    ||||||| || || |||||||||  ||||||||||||| ||||    
T  6238292 tttacatatgtttttatttctccgacattttgtactatggacc 6238334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 41197671 - 41197792
Alignment:
Q  30 cgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatac---gatgat 126  Q
    |||||||||||| |||||| ||||||||||||||| ||||| || |||||||  | ||||||||| ||||||||||||||||||| |||||   ||||||    
T  41197671 cgatagaactttcctttcagcttaagtggtacttttttatcgcacaaaacacctgagactcttctccatttcaaccacccaacttgaatacgatgatgat 41197770  T
Q  127 ttacatctgcttctatttctcc 148  Q
    | |||| |||||||||||||||    
T  41197771 tcacatatgcttctatttctcc 41197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 220
Target Start/End: Complemental strand, 17581270 - 17581121
Alignment:
Q  67 tatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactataga 166  Q
    |||||||||||||||  | ||||||||| ||||| ||||| ||||||| |||| || ||||||||||||||| |||||||   ||||||||||| ||  |    
T  17581270 tatcacataaaacacctgagactcttctccatttgaaccatccaacttgaatatgaggatttacatctgcttttatttctttgtcattttgtacaatgaa 17581171  T
Q  167 cccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcac 220  Q
    ||||||| | |||||| |||||||||   ||||||||||||||| |||||||||    
T  17581170 cccaaga-atttaaactgtgtaactt---gtatgatatgatctctaactttcac 17581121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 12904740 - 12904624
Alignment:
Q  97 atttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttgggg 196  Q
    |||||||||||| ||||| ||| | ||| ||||||||| || | | |||||||| |||||||||||||||| | | ||| ||||||||||||||||| |     
T  12904740 atttcaaccacctaacttgaattctatggtttacatctcctccaacttctccattattttgtactatagacaccatatatttaaaccgtgtaacttgtga 12904641  T
Q  197 tatgatatgatctccaa 213  Q
    |||||||||||||||||    
T  12904640 tatgatatgatctccaa 12904624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 33594782 - 33594904
Alignment:
Q  100 tcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtat 199  Q
    |||||||||||  || |||  |||| ||||||||| |||||||||||||  | |||||||||||| ||| |||||| |||||| |||||| |   |||||    
T  33594782 tcaaccacccagtttgaatttgatgttttacatctccttctatttctccgacgttttgtactatatacctaagatatttaaactgtgtaaatgctggtat 33594881  T
Q  200 gatatgatctccaactttcacct 222  Q
    ||||||| |||||||||||||||    
T  33594882 gatatgaactccaactttcacct 33594904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 876842 - 876779
Alignment:
Q  159 actatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    |||||||| |||| ||| |||||| |||||||||| |||| |||||||||||||||||||||||    
T  876842 actatagatccaacatatttaaactgtgtaacttgtggtaggatatgatctccaactttcacct 876779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 12475031 - 12475105
Alignment:
Q  197 tatgatatgatctccaactttcacctgcaaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| |||   ||  |||||||||||||||||||    
T  12475031 tatgatatgatctccaactttcacctctaaggtagacctacttctccttccgctgaagttacattccatatactc 12475105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 14770037 - 14769943
Alignment:
Q  122 atgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactt 216  Q
    ||||||||||| |||||  |||||||  |  ||||||||||| | || |||||| ||||||||||||||||  | ||||||||||||||||||||    
T  14770037 atgatttacatatgcttgaatttctctgttgttttgtactatggccctaagatatttaaaccgtgtaacttatgctatgatatgatctccaactt 14769943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 36038936 - 36038849
Alignment:
Q  153 ttttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttc 240  Q
    ||||||| |||||| |||||||| |||||   ||||| ||||||||||||||||||| |||||||||  |  |||||||| |||||||    
T  36038936 ttttgtaatatagatccaagatatttaaatgatgtaaattggggtatgatatgatcttcaactttcagttataaggtagaactacttc 36038849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 12734545 - 12734499
Alignment:
Q  30 cgatagaacttttctttcaacttaagtggtactttcttatcacataa 76  Q
    |||||||||||| ||||||||||||||||||||||||| || |||||    
T  12734545 cgatagaactttcctttcaacttaagtggtactttcttgtcgcataa 12734499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 7292761 - 7292688
Alignment:
Q  96 catttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagaccc 169  Q
    |||||||||||||||||||  ||  |||| ||||||||| |||||||| | || ||| ||||||||||||||||    
T  7292761 catttcaaccacccaacttggatttgatggtttacatctccttctattcccccgtcagtttgtactatagaccc 7292688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 16097438 - 16097477
Alignment:
Q  31 gatagaacttttctttcaacttaagtggtactttcttatc 70  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  16097438 gatagaactttcctttcaacttaagtggtaccttcttatc 16097477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 23997460 - 23997405
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacac 81  Q
    |||||||||||||||| |||||| ||||||||||| ||||| ||| || |||||||    
T  23997460 tgtccgatagaactttcctttcagcttaagtggtattttctcatcgcacaaaacac 23997405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 6465504 - 6465370
Alignment:
Q  86 gactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgt 185  Q
    ||||||||| ||| ||| |||||  |||| |||  |||||||| ||| |||||| |||||||  |||||||||| ||||   |||| ||| | |||  ||    
T  6465504 gactcttctccatctcagccacctgacttgaatttgatgatttgcatatgcttcaatttctcagtcattttgtagtataatgccaaaatattaaaattgt 6465405  T
Q  186 gtaacttggggtatgatatgatctccaactttcac 220  Q
    |||||||| | | | ||||||||||||||||||||    
T  6465404 gtaacttgtgttttaatatgatctccaactttcac 6465370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 7135223 - 7135320
Alignment:
Q  125 atttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    |||||| ||| |||||||||||  ||  ||||||||| | |||||||||   || ||| |||||||||| ||||||||||||| || || ||||||||    
T  7135223 atttacttctacttctatttctttattgttttgtactgtggacccaagactttttaactgtgtaacttgtggtatgatatgatatctaaatttcacct 7135320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 4e-84; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 30 - 271
Target Start/End: Complemental strand, 25191218 - 25190977
Alignment:
Q  30 cgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgattta 129  Q
    ||||||||| || |||||||||||||||||||||||||||| || |||||||  | ||||||||| ||||||||||||||| ||| ||||||||||||||    
T  25191218 cgatagaaccttcctttcaacttaagtggtactttcttatcgcacaaaacacctgagactcttctccatttcaaccacccagcttgaatacgatgattta 25191119  T
Q  130 catctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggt 229  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  25191118 catttgcttctatttctccatcattttgtactatagacccaagatatttaaaccgtgtaacttgggctatgatatgatctccaactttcacctccaaggt 25191019  T
Q  230 agagctacttcttctttgactagagttacattccatatactc 271  Q
    ||| | |||||| ||||  ||  |||||||||||||||||||    
T  25191018 agacccacttctccttttgctgaagttacattccatatactc 25190977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 51448146 - 51448393
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||| || ||||||| || | ||||||| ||||||||||||||| ||| ||||||||    
T  51448146 gctgtccgatataactttcctttcaacttaagtggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgat 51448245  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
       |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  51448246 agcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 51448345  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  ||||||||| |||||||||    
T  51448346 caaggtagacctacttctccttccgctgaagttacatttcatatactc 51448393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 47542148 - 47542395
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| |||| |||    
T  47542148 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgat 47542247  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||     
T  47542248 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgaaatgatctccaactttcacctc 47542347  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||| ||||    
T  47542348 caaggtagacctacttctccttctgctgaagttacattccatacactc 47542395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 27917411 - 27917173
Alignment:
Q  30 cgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgattta 129  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||||||||||  | | |||||||  |||||| | ||||||||| ||||||||||||||    
T  27917411 cgatagaatttttcattcaacttaagtggtacttttttatcacataaaacacatgaggctcttctctatttcagctacccaacttgaatacgatgattta 27917312  T
Q  130 catctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggt 229  Q
     || ||||| ||||||||| |||||||||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  27917311 tatatgcttatatttctccgtcattttgtactatggactcaagatatttaaaccgtgtaacttgggatatgatatgatctccaactttcaccttcaaggt 27917212  T
Q  230 agagctacttcttctttgactagagttacattccatata 268  Q
    ||| ||| |||| |||| |||  ||||||| ||||||||    
T  27917211 agaactagttctccttttactgaagttacaatccatata 27917173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 26 - 271
Target Start/End: Complemental strand, 38849937 - 38849692
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    ||||||||| ||  ||||||||||||||||||||||||| ||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||| |||     
T  38849937 tgtccgataaaaaatttctttcaacttaagtggtactttgttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacaatgg 38849838  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
     |||||||||||||||||||||| |||||||||||| | ||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| ||    
T  38849837 cttacatctgcttctatttctccgtcattttgtactgtggacccaagatatttaaaccgtgtaaattgaggtatgatatgatctccaactttcacctcca 38849738  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||| |||||||| ||||   |  |||||||||||||||||||    
T  38849737 aggtagacctacttctccttttgatgtagttacattccatatactc 38849692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 24 - 213
Target Start/End: Complemental strand, 28245282 - 28245093
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||   | ||||||||| ||||||||||||||| ||| ||||||||    
T  28245282 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacaactgagactcttctccatttcaaccacccagcttgaatacgat 28245183  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaa 213  Q
    |  |||||||||||||||||||||||||||||||||| |  || |||||||| |||| |||||||||||||||||| |||||||||||||    
T  28245182 ggcttacatctgcttctatttctccatcattttgtacgaaggatccaagatatttaagccgtgtaacttggggtattatatgatctccaa 28245093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 29817347 - 29817100
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||     |||| ||||  |||||||||||||||||| ||||||||||    
T  29817347 tgtccggtagaaattttctttcaacttaagcgttactttcttatcacataaaacataacagactattctctatttcaaccacccaacttgaatacgatga 29817248  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    |||||||||||   ||||| ||| |||||||||||||| |  | |||||| || |||||||||||||  |||||||||||||||||||||||||||| ||    
T  29817247 tttacatctgccgttatttatccgtcattttgtactat-ggtcaaagatatttgaaccgtgtaacttatggtatgatatgatctccaactttcacctcca 29817149  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    || |||| | |||||  ||||   |  ||||||||||||||||||||||    
T  29817148 agatagaacaacttcaccttttgatgaagttacattccatatactctgt 29817100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 117 - 274
Target Start/End: Complemental strand, 19757820 - 19757663
Alignment:
Q  117 atacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactt 216  Q
    |||||||||||||||||||||  ||||||||  | |||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  19757820 atacgatgatttacatctgctcttatttctctgttattttgtactatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaactt 19757721  T
Q  217 tcacctgcaaggtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    |||||| ||||||||  ||||||   ||||  ||| ||||||||||||||||||||||    
T  19757720 tcacctccaaggtaggactactttgccttttgctaaagttacattccatatactctgt 19757663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 54425349 - 54425511
Alignment:
Q  30 cgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgattta 129  Q
    ||||| || ||| ||| ||||||||||||||||||||||||||| |||||||  | ||||||| | |||||||||| || | ||||||||||||||||||    
T  54425349 cgataaaattttccttccaacttaagtggtactttcttatcacacaaaacacatgagactctttttcatttcaaccgcctagcttaaatacgatgattta 54425448  T
Q  130 catctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaactt 192  Q
    ||| ||||||||||||||| ||||||| |||||| || |||||||| ||||||||||||||||    
T  54425449 catatgcttctatttctccgtcattttttactatggatccaagatatttaaaccgtgtaactt 54425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 150 - 271
Target Start/End: Complemental strand, 52138547 - 52138426
Alignment:
Q  150 tcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttcttctttgac 249  Q
    ||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||   |    
T  52138547 tcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgc 52138448  T
Q  250 tagagttacattccatatactc 271  Q
    |  |||||||||||||||||||    
T  52138447 tgaagttacattccatatactc 52138426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 222
Target Start/End: Complemental strand, 26490159 - 26489964
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    ||||||||| || ||| |||| || ||||| |||| ||||| || ||||||||| ||  || || |||| ||| |||||||| |||||| |||| |||||    
T  26490159 tgtccgatataattttcctttaaatttaagcggtattttctcattacataaaactctaagg-ctattcttcatctcaaccactcaacttcaatatgatga 26490061  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||||||||||||||||||| ||||||| ||  || || |||||||| ||||| | |||||||||| |||||||||||||||| ||||||||||    
T  26490060 tttacatctgcttctatttctccgtcattttatatcatggaaccaagatatttaaatcatgtaacttggagtatgatatgatctcccactttcacct 26489964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 222
Target Start/End: Complemental strand, 30345363 - 30345178
Alignment:
Q  33 tagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacat 132  Q
    ||||| ||| ||||||| ||||| |||||||||||||| ||||||||||  | ||||||||| ||||||||||||||||||| ||||| |||||||| ||    
T  30345363 tagaattttcctttcaatttaagcggtactttcttatcgcataaaacacctgagactcttctccatttcaaccacccaacttgaatactatgatttatat 30345264  T
Q  133 ctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
     || || ||||||||  || |||||||||||  |||    ||| ||||||| |||| ||||||||||||||||| || | ||||||||||    
T  30345263 atgtttttatttctctttctttttgtactatgaacc----atatttaaaccttgtagcttggggtatgatatgagcttccactttcacct 30345178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 48221608 - 48221431
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctattt 144  Q
    |||||||| ||  |||||||| ||||||| |||||| | | |  |||||| ||||||||||| |||  || ||| ||||||||||||| |||||||| ||    
T  48221608 ttcaacttgagcagtactttcgtatcacacaaaacattggaggttcttcttcatttcaaccatccagtttgaattcgatgatttacatatgcttctactt 48221509  T
Q  145 ctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    |||  ||||||||||||||  | |||||||| |||||  |||||||||| ||||||||||||||| ||||||||||||    
T  48221508 ctctgtcattttgtactatgaatccaagatatttaaaatgtgtaacttgtggtatgatatgatcttcaactttcacct 48221431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 274
Target Start/End: Complemental strand, 19736914 - 19736761
Alignment:
Q  117 atacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactt 216  Q
    |||||||||||||||||||||  ||||||||  | |||||||||||| ||    ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  19736914 atacgatgatttacatctgctcttatttctctgttattttgtactatgga----agatatttaaaccatgtaacttggggtatgatatgatctccaactt 19736819  T
Q  217 tcacctgcaaggtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    |||||| ||||||||  |||||    ||||  ||  ||||||||||||||||||||||    
T  19736818 tcacctccaaggtaggactactctgccttttgctgaagttacattccatatactctgt 19736761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 3186612 - 3186500
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||||  |  | | |||| ||||||||||||||||||| |||||||||     
T  3186612 tgtccgatataactttcctttcaacttaagtgatactttcttatcacctaaaacacatgaaaatattcttcatttcaaccacccaacttgaatacgatgt 3186513  T
Q  126 tttacatctgctt 138  Q
    |||||||||||||    
T  3186512 tttacatctgctt 3186500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 52138645 - 52138559
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccaccca 110  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| || || ||||  | ||||||||| |||||||||||||||    
T  52138645 gctgtccgatagaactttcctttcaacttaagtggtattttcttatcgcacaagacacctgagactcttctccatttcaaccaccca 52138559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 30724311 - 30724435
Alignment:
Q  98 tttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggt 197  Q
    |||| |||||||||||| ||| |||| |||||||| |  |||||||||||  | |||||||| |||  | ||||||||  ||||| |||||||||   ||    
T  30724311 tttctaccacccaacttgaattcgataatttacatatcattctatttctcacttattttgtaatatgtatccaagatatctaaactgtgtaacttatagt 30724410  T
Q  198 atgatatgatctccaactttcacct 222  Q
    ||||||||||||||||| |||||||    
T  30724411 atgatatgatctccaacgttcacct 30724435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 219
Target Start/End: Complemental strand, 44395227 - 44395080
Alignment:
Q  67 tatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactataga 166  Q
    |||||||||||||||| ||  |||  || ||||||||||||  ||||| ||| ||||| |||||||||   ||||||||||  |  ||| ||||||| ||    
T  44395227 tatcacataaaacacttggtcctc--cttcatttcaaccacttaacttgaattcgatggtttacatct---tctatttctctgttgtttagtactatgga 44395133  T
Q  167 cccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttca 219  Q
    ||| ||||| ||||| ||||||||||| | | || ||||||||||||||||||    
T  44395132 cccgagatatttaaatcgtgtaacttgcgttgtggtatgatctccaactttca 44395080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 40674556 - 40674606
Alignment:
Q  30 cgatagaacttttctttcaacttaagtggtactttcttatcacataaaaca 80  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  40674556 cgatagaattttcctttcaacttaagtgatactttcttatcacataaaaca 40674606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 5168671 - 5168616
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacac 81  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||| || |||||||    
T  5168671 tgtccgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacac 5168616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 9258583 - 9258541
Alignment:
Q  165 gacccaagataattaaaccgtgtaacttggggtatgatatgat 207  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  9258583 gacccaagatatttaaaccgtgtaacttgggatatgatatgat 9258541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 32490298 - 32490356
Alignment:
Q  161 tatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttca 219  Q
    ||||||||||||| | |||||  |||||||||| ||||||||||||||| |||||||||    
T  32490298 tatagacccaagaaatttaaattgtgtaacttgtggtatgatatgatcttcaactttca 32490356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 222
Target Start/End: Complemental strand, 46145926 - 46145800
Alignment:
Q  96 catttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggg 195  Q
    |||| |||||| | ||||| ||| | ||| |||||| ||  ||||||| || | || ||||||||||| ||| ||| ||| ||||||||| ||||||| |    
T  46145926 cattccaaccatctaacttgaattcaatggtttacacctctttctattgctacgtcgttttgtactatggactcaaaatatttaaaccgtataacttgtg 46145827  T
Q  196 gtatgatatgatctccaactttcacct 222  Q
    |||||| || |||||||||||| ||||    
T  46145826 gtatgacataatctccaactttaacct 46145800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 219
Target Start/End: Complemental strand, 15751068 - 15750888
Alignment:
Q  39 ttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgctt 138  Q
    ||||| |||||||| ||||||| |||  |||||||||||||   |  || |||||| ||||||||||||| ||| | | || |||| ||||||| |||||    
T  15751068 ttttccttcaacttgagtggtagttttgtatcacataaaacttccaagattcttcttcatttcaaccacctaacatgagtatgatgttttacatatgctt 15750969  T
Q  139 ctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttca 219  Q
    | || ||||| || ||||| | |||  |||||| ||  ||||| | ||||| ||| | | | |||||||||||||||||||    
T  15750968 cgatgtctccttcgttttgcattatgaacccaaaatgtttaaatcatgtaatttgagatgtcatatgatctccaactttca 15750888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 1470669 - 1470732
Alignment:
Q  159 actatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    |||||| ||| || ||| ||||||| || |||||  ||||||||||||||||||||||||||||    
T  1470669 actataaaccaaaaatatttaaaccatgcaacttttggtatgatatgatctccaactttcacct 1470732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 19757644 - 19757579
Alignment:
Q  209 tccaactttcacctgcaaggtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    |||||||||||||| ||||||||  ||||||   ||||  ||| ||||||||||||||||||||||    
T  19757644 tccaactttcacctccaaggtaggactactttgccttttgctaaagttacattccatatactctgt 19757579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 43111626 - 43111675
Alignment:
Q  197 tatgatatgatctccaactttcacctgcaaggtagagctacttcttcttt 246  Q
    ||||||||||||||||||| ||||||  |||||| | |||||||||||||    
T  43111626 tatgatatgatctccaactgtcacctctaaggtacaactacttcttcttt 43111675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 43695202 - 43695230
Alignment:
Q  24 gctgtccgatagaacttttctttcaactt 52  Q
    |||||||||||||||||||||||||||||    
T  43695202 gctgtccgatagaacttttctttcaactt 43695230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 24 - 270
Target Start/End: Original strand, 33350243 - 33350489
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| || |||||||| | | ||||||| ||||||||||||||| ||| ||||||||    
T  33350243 gctgtccgatagaactttcctgtcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgat 33350342  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  33350343 ggcttacatctgcttctatttctccgtcattttgtacgaaagaccctagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 33350442  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatact 270  Q
    ||||||||| ||||||||||||   ||  ||||||||||||||||||    
T  33350443 caaggtagacctacttcttcttccgctgaagttacattccatatact 33350489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 25 - 271
Target Start/End: Original strand, 46356289 - 46356535
Alignment:
Q  25 ctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatg 124  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| || |||||||  | | ||||||| ||||||||||||||||||| |||||||||    
T  46356289 ctgtccgatagaactttcctttcaacttaagtagtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatacgatg 46356388  T
Q  125 atttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgc 224  Q
      |||||||||||||||||||||| ||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  46356389 gcttacatctgcttctatttctccgtcattttgtacaaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 46356488  T
Q  225 aaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    |||||||| |||||||| |||   ||  |||||||||||||||||||    
T  46356489 aaggtagacctacttctccttccgctgaagttacattccatatactc 46356535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 36651839 - 36651592
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  36651839 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 36651740  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||     
T  36651739 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgcgtaacttggggtatgatatgatctccaactttcacctc 36651640  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| ||||||||||||   ||  |||| ||||||||||||||    
T  36651639 caaggtagacctacttcttcttccgctgaagttccattccatatactc 36651592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 24 - 274
Target Start/End: Complemental strand, 31005068 - 31004819
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||||||| ||||||||    
T  31005068 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatacgat 31004969  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||     
T  31004968 ggcttacatctgcttctatttctccgtcattttgtacgaaggagccaagatatttaaa-cgtgtaacttggggtatgatatgatctccaactttcacctc 31004870  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    ||||||||| |||||||| |||   ||  ||| ||||||||||||||||||    
T  31004869 caaggtagacctacttctccttccgctgaagtaacattccatatactctgt 31004819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 26 - 271
Target Start/End: Complemental strand, 38606848 - 38606604
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| || |||||||    | ||||||| ||||||||||||||| ||| |||||||||     
T  38606848 tgtccgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctaaggctcttctccatttcaaccacccagcttgaatacgatgg 38606749  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    ||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  38606748 tttacatctgcttctatttcttcgtcattttgtactatggacccaagatatttaaaccgtgtaacttgggatatgatatgatctccaactttcacct-ca 38606650  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||| | |||||| ||||  | | | |||||||||||||||||    
T  38606649 aggtagacccacttctccttttgcaaaaattacattccatatactc 38606604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 11593803 - 11593583
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| || |||||||  | | ||||||| ||||||||||||||| ||| |||||||||     
T  11593803 tgtccgatagaactttcctttcaacttaagtggtacttttttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgatgg 11593704  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
     |||||||||||||||||||||||||||||||||| |  ||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| ||    
T  11593703 cttacatctgcttctatttctccatcattttgtacgaaggacccaagatatttaaaccgtctaacttggggtatgatatgatcttcaactttcacctcca 11593604  T
Q  226 aggtagagctacttcttcttt 246  Q
    ||||||| |||||||| ||||    
T  11593603 aggtagacctacttctccttt 11593583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 37616761 - 37616514
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||| |||||| |||||| |||||||||||||||||||||||||||| || |||||||| | | ||||||| ||||||||||||||| ||| ||||| ||    
T  37616761 gctggccgatataactttcctttcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacaat 37616662  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||     
T  37616661 ggcttacatctgcttctatttctccgtcattttgtacaaaggacccaagatatttaaatcgtgtaacttggggtatgatatgatctccacctttcacctc 37616562  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  37616561 caaggtagacctacttctccttctgctgaagttacattccatatactc 37616514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 39906812 - 39907063
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacattt----caaccacccaacttaaata 119  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||   | | ||||||| |||||    |||||||||| ||| ||||    
T  39906812 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacatctgaggctcttctccatttcaaccaaccacccagcttgaata 39906911  T
Q  120 cgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttca 219  Q
    |||||  || ||||| ||||||||||||| ||||||||||| |  ||||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  39906912 cgatggcttgcatctacttctatttctccgtcattttgtacgaatgacccaagatatttaaaccgtgtaacatgggatatgatatgatctccaactttca 39907011  T
Q  220 cctgcaaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||| ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  39907012 cctccaaggtagacctacttctccttccgctgaagttacattccatatactc 39907063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 26 - 270
Target Start/End: Original strand, 36869728 - 36869972
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || ||||| |  | | ||||||| ||||||||||||||| ||| |||||||||     
T  36869728 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacccctgaggctcttctccatttcaaccacccagcttgaatacgatgg 36869827  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
     |||||||||||| ||||||| | |||||||||||||| || |||||||| |||||||| |||| ||||||||||||||| |||||||||||||||| ||    
T  36869828 cttacatctgcttttatttcttcgtcattttgtactatggatccaagatatttaaaccgcgtaatttggggtatgatatgctctccaactttcacctcca 36869927  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatact 270  Q
     ||||||  |||||   ||||  ||  ||||||||||||||||||    
T  36869928 gggtagacatactttcccttttcctgaagttacattccatatact 36869972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 26 - 271
Target Start/End: Complemental strand, 32630438 - 32630205
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||| |||||||| |||||||||||| || |||||||||| | ||||||| ||||||||| ||||| ||| ||||||||||    
T  32630438 tgtccgatagaactttcctttcagcttaagtgatactttcttatcgcacaaaacactcgaggctcttctccatttcaactacccagcttgaatacgatga 32630339  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    | ||             ||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32630338 tgtaa------------ttctccatcattttgtaatatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcca 32630251  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||| | |||||| ||||  ||  |||||||||||||||||||    
T  32630250 aggtagacccacttctccttttgctgaagttacattccatatactc 32630205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 26 - 271
Target Start/End: Complemental strand, 48919231 - 48918986
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    ||||||||| ||| || ||||||||||||| |||||||||||||| || |||||||  | | ||||||| ||||||||| ||||| ||| ||||||||||    
T  48919231 tgtccgatataaccttcctttcaacttaaggggtactttcttatcgcacaaaacacctgaggctcttctccatttcaactacccagcttgaatacgatga 48919132  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    || |||| ||||||||||||||| |||||||||||||| || |||| ||| ||||||||||||||||||||| | ||||||||||| ||||| |||| ||    
T  48919131 ttcacatatgcttctatttctccgtcattttgtactatggatccaaaatatttaaaccgtgtaacttggggtgtaatatgatctcctacttttaccttca 48919032  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    | ||||| |||||||| | ||  ||  ||| |||||||||||||||    
T  48919031 atgtagacctacttctccatttgctgaagtcacattccatatactc 48918986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 101 - 271
Target Start/End: Complemental strand, 49029035 - 49028865
Alignment:
Q  101 caaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatg 200  Q
    |||||||||| ||| |||||||||   ||||||||||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||    
T  49029035 caaccacccagcttgaatacgatggcatacatctgcttctatttctccatcattttgtacaaaggacccaagatatttaaaccgtgtaacttggggtatg 49028936  T
Q  201 atatgatctccaactttcacctgcaaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    || ||||||||||||||||||| ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  49028935 atctgatctccaactttcacctccaaggtagacctacttctccttcccctgaagttacattccatatactc 49028865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 24177714 - 24177879
Alignment:
Q  106 acccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatg 205  Q
    ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||| |||||  |||| ||||||||||||| |||||||||||||||    
T  24177714 acccaacttgaatatgatgatttacatctgcttctatttctccgtcattttgtactattgacccgtgatatttaaaccgtgtaaattggggtatgatatg 24177813  T
Q  206 atctccaactttcacctgcaaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||| || |||| |||| |||||||||||||  ||  |||||||||||||||||||    
T  24177814 atctccaaccttcatctacaagctagacctacttcttcttttgctgaagttacattccatatactc 24177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 182
Target Start/End: Original strand, 35906638 - 35906796
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  |    |||||| ||||||||||||||| ||| ||||||||    
T  35906638 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaagatcttctccatttcaaccacccagcttgaatacgat 35906737  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaac 182  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||    
T  35906738 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaac 35906796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 43281521 - 43281389
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| || ||||| |  | | ||||||| ||||||||||||||| ||| ||||||||    
T  43281521 gctgtccgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacgcctgaggctcttctccatttcaaccacccagcttgaatacgat 43281422  T
Q  124 gatttacatctgcttctatttctccatcatttt 156  Q
    ||||||||||||||||||||||||| |||||||    
T  43281421 gatttacatctgcttctatttctccgtcatttt 43281389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 33072797 - 33072666
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| || |||||||| | | ||||||| ||||||||||| ||||||| |||||||||     
T  33072797 tgtccgatagaactttccttttaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccatccaacttgaatacgatgg 33072698  T
Q  126 tttacatctgcttctatttctccatcattttg 157  Q
     ||||||||||||||| || ||| ||||||||    
T  33072697 cttacatctgcttctaattatccgtcattttg 33072666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 40 - 222
Target Start/End: Original strand, 43793496 - 43793675
Alignment:
Q  40 tttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttc 139  Q
    |||| ||||||||||| |||||||||  ||||||||| ||||  | |   || || ||||||||||||| | |||| ||  |||| ||||||||| ||      
T  43793496 tttccttcaacttaagcggtactttcacatcacataatacacctgaggaactcctccatttcaaccacctagcttagatttgatggtttacatctcct-- 43793593  T
Q  140 tatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
     |||||| | |||||||||||||||||||||||||| |||||  |||||||| | |||||||||||||||| |||||||||||    
T  43793594 -atttcttcgtcattttgtactatagacccaagatatttaaaatgtgtaactagtggtatgatatgatctctaactttcacct 43793675  T

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Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 24425960 - 24426105
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    ||||| |||||| ||| | ||||||||||||||||||| | ||||||||||||||||    ||||||||| ||||||||||| |||||||||||| ||||    
T  24425960 tgtccaatagaattttcccttcaacttaagtggtacttacatatcacataaaacacttaaaactcttctatatttcaaccactcaacttaaatacaatga 24426059  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaa 171  Q
    || |||||| | | ||||||    | |||||||||||| |||||||    
T  24426060 ttgacatctacatatatttccttgttattttgtactattgacccaa 24426105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 34869265 - 34869165
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || ||||| |  | | ||||||| || |||||||||||| ||| |||| |||    
T  34869265 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacgcctgaggctcttctccaattcaaccacccagcttgaatatgat 34869166  T
Q  124 g 124  Q
    |    
T  34869165 g 34869165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 88 - 222
Target Start/End: Original strand, 21517826 - 21517959
Alignment:
Q  88 ctcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgt 187  Q
    |||||||  |||||||||||||||||| |||| |||||||||||| || |  ||||||| | ||| ||||||||||  | |||||||| |||||| ||||    
T  21517826 ctcttctcgatttcaaccacccaacttgaatatgatgatttacatatgttattatttcttcgtca-tttgtactatgaatccaagatatttaaactgtgt 21517924  T
Q  188 aacttggggtatgatatgatctccaactttcacct 222  Q
    || ||| ||||| || || ||||||||||||||||    
T  21517925 aaattgaggtatcatgtggtctccaactttcacct 21517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 23087554 - 23087688
Alignment:
Q  39 ttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgctt 138  Q
    |||| ||||||||||| |||||| ||  ||||||||||||||  || | ||||| | ||||||||||| | ||||| ||||| |||||||||||   |||    
T  23087554 ttttatttcaacttaaatggtacgtttgtatcacataaaacagacgaggctcttttccatttcaaccatctaacttgaatacaatgatttacatacactt 23087653  T
Q  139 ctatttctccatcattttgtactatagacccaaga 173  Q
     ||||||||| ||||||||||||||  ||||||||    
T  23087654 ttatttctccttcattttgtactatgaacccaaga 23087688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 7189687 - 7189777
Alignment:
Q  42 tctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacat 132  Q
    |||||||| ||||||  ||||||||||||| |||||||||  | |||| |||| |||||||||||| |||| ||||||| |||||||||||    
T  7189687 tctttcaatttaagtaatactttcttatcaaataaaacacctgagacttttctccatttcaaccactcaacataaatacaatgatttacat 7189777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 12841712 - 12841769
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacac 81  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  12841712 gctgtacgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacac 12841769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 24550198 - 24550319
Alignment:
Q  96 catttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggg 195  Q
    ||||||||||||||||||| ||| | |  |||||||||| ||||||||  ||| || ||||||| ||| |||  |||||| ||||| |||||||||        
T  24550198 catttcaaccacccaacttgaattcaacaatttacatctccttctattaatccgtcgttttgtaatatggactaaagatatttaaatcgtgtaact---- 24550293  T
Q  196 gtatgatatgatctccaactttcacct 222  Q
     ||||||||||||| ||||||||||||    
T  24550294 -tatgatatgatcttcaactttcacct 24550319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 7272884 - 7272780
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||| |||||| |||||| || |||||||||||||||||||||||||||| |||| ||  | | || ||||  || ||||||||||| ||| ||||||||    
T  7272884 gctgaccgatacaactttcctctcaacttaagtggtactttcttatcacacaaaatacctgaggct-ttctcaatctcaaccacccagcttgaatacgat 7272786  T
Q  124 gattta 129  Q
    ||||||    
T  7272785 gattta 7272780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 18608239 - 18608319
Alignment:
Q  136 cttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactt 216  Q
    |||||||||| || ||||||||||||||  ||  |||||| |||||  |||||||||| | ||||||||||||||||||||    
T  18608239 cttctatttccccgtcattttgtactatcaacttaagatatttaaaatgtgtaacttgtgatatgatatgatctccaactt 18608319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 18626639 - 18626559
Alignment:
Q  136 cttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactt 216  Q
    |||||||||| || ||||||||||||||  ||  |||||| |||||  |||||||||| | ||||||||||||||||||||    
T  18626639 cttctatttccccgtcattttgtactatcaacttaagatatttaaaatgtgtaacttgtgatatgatatgatctccaactt 18626559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 18637313 - 18637233
Alignment:
Q  136 cttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactt 216  Q
    |||||||||| || ||||||||||||||  ||  |||||| |||||  |||||||||| | ||||||||||||||||||||    
T  18637313 cttctatttccccgtcattttgtactatcaacttaagatatttaaaatgtgtaacttgtgatatgatatgatctccaactt 18637233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 18650748 - 18650668
Alignment:
Q  136 cttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactt 216  Q
    |||||||||| || ||||||||||||||  ||  |||||| |||||  |||||||||| | ||||||||||||||||||||    
T  18650748 cttctatttccccgtcattttgtactatcaacttaagatatttaaaatgtgtaacttgtgatatgatatgatctccaactt 18650668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 23404261 - 23404181
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaacca 106  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||| || |||||||  | | ||||||| ||||| |||||    
T  23404261 tgtccgatagaattttcctttcaacttaagtggtcctttcttatctcagaaaacacctgaggctcttctccattttaacca 23404181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 5843177 - 5843105
Alignment:
Q  136 cttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatc 208  Q
    |||| |||||| |||| ||||||| |||| ||| || ||| ||||| ||||||||||| ||||||||||||||    
T  5843177 cttcgatttcttcatcgttttgtattataaacctaaaatatttaaatcgtgtaacttgtggtatgatatgatc 5843105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 418888 - 419002
Alignment:
Q  66 ttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatag 165  Q
    |||||||||||||| |||  | ||||||| ||||||| ||||||| ||| |||  |||| |||||||||    |||||||||| ||||||| ||| || |    
T  418888 ttatcacataaaaccctctaggctcttctccatttcacccacccagcttgaatctgatg-tttacatctctcactatttctccgtcattttctacaatgg 418986  T
Q  166 acccaagataattaaa 181  Q
    |||||||||| |||||    
T  418987 acccaagatatttaaa 419002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 33139052 - 33139006
Alignment:
Q  88 ctcttctacatttcaaccacccaacttaaatacgatgatttacatct 134  Q
    ||||||| |||||||| |||||||| | |||||||||||||||||||    
T  33139052 ctcttctccatttcaatcacccaacatgaatacgatgatttacatct 33139006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 12965850 - 12965813
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacact 82  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  12965850 ttcaacttgagtggtactttcgtatcacataaaacact 12965813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 6e-80; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 25 - 271
Target Start/End: Original strand, 10100295 - 10100541
Alignment:
Q  25 ctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatg 124  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| |||| |||||||||| ||| |||||||||    
T  10100295 ctgtccgatagaactttcctttcaacttaagtggtactttcttatctcacaaaacacatgaggctcttctccattccaaccacccagcttgaatacgatg 10100394  T
Q  125 atttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgc 224  Q
    ||||| ||| ||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  10100395 atttatatcagcttctatttctccgacattttgtactatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 10100494  T
Q  225 aaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    |||||||| ||||||||  |||  ||| |||||||||||||||||||    
T  10100495 aaggtagacctacttctcattttgctaaagttacattccatatactc 10100541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 26 - 270
Target Start/End: Complemental strand, 5631661 - 5631416
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||| || ||||||| || ||||||||| ||||||||||||||| ||| ||||||||||    
T  5631661 tgtccgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacacccgagactcttctccatttcaaccacccagcttgaatacgatga 5631562  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagaccc-aagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgc 224  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  5631561 tttacatctgcttctatttctccgtcattttgtactatggacccaaaaatatttaaaccgtgtaacttggggtatgatatgatctctaactttcacctgc 5631462  T
Q  225 aaggtagagctacttcttctttgactagagttacattccatatact 270  Q
    |||||||| | |||||| ||||  ||  ||||||||||||||||||    
T  5631461 aaggtagacccacttctccttttgctgaagttacattccatatact 5631416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 9706621 - 9706374
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||||| || |||||||  |   ||||||| ||||||||||||||| ||| ||||||||    
T  9706621 gctgttcgatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacctgatgctcttctccatttcaaccacccagcttgaatacgat 9706522  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |||||||| |||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||     
T  9706521 gatttacacctgcttctatttctccatcattttgtaccatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcatctc 9706422  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||| | | |||||| ||||  ||  |||||||||||||||||||    
T  9706421 caaggtatacccacttctccttttgctgaagttacattccatatactc 9706374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 26 - 270
Target Start/End: Original strand, 5258589 - 5258833
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||||    
T  5258589 tgtccgatagaactttcctttcagcttaagtggtactttctcatcgcaaaaaacacatgaggctcttctccatttcaaccacccagcttgaatacgatga 5258688  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    | |||||| |||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| | ||    
T  5258689 tgtacatcagcttctatttctccgtcattttgtactatggacccaagatatttaaactgtgtaacttggggtatgatatgatctccaactttcacttcca 5258788  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatact 270  Q
    ||||||| | |||||| ||||  ||  ||||||||||||||||||    
T  5258789 aggtagacccacttctccttttgctgaagttacattccatatact 5258833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 20428073 - 20428320
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||| || ||||||| || | ||||||| ||||||||||||||| |||  |||||||    
T  20428073 gctgtccaatagaactttcctttcagcttaagtggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttggatacgat 20428172  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    ||||||||||||||||||||| ||| || ||||||||| | ||||||| ||| |||||||| |||||||| ||||||||||||||||||||||||||||     
T  20428173 gatttacatctgcttctatttttccgtcgttttgtactgtggacccaatatatttaaaccgcgtaacttgtggtatgatatgatctccaactttcacctc 20428272  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    | ||||||| ||| |||| ||||  ||  |||||||||||||||||||    
T  20428273 ctaggtagacctaattctccttttgctgaagttacattccatatactc 20428320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 2689501 - 2689313
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||| ||||||| |||||||||||||| || ||||||||||||| |||| ||  | | | ||||| |||||||| || ||| ||| | ||||||    
T  2689501 gctgtccgattgaactttcctttcaacttaagtagtgctttcttatcacacaaaatacatgaggcacttctccatttcaatcatccagcttgactacgat 2689402  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctcca 212  Q
    |||||||||||| |||||||||||| || ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||    
T  2689401 gatttacatctgattctatttctccgtcgttttgtactatagacccaaaatatttaaaccgtgtaacttagggtatgatatgatctcca 2689313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 274
Target Start/End: Complemental strand, 33496023 - 33495802
Alignment:
Q  43 ctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctat 142  Q
    |||| |||||||||||||||||||||||||| ||||||   | ||||||||| ||||||||||| ||| ||| |||| ||||| |||||| |||||||||    
T  33496023 ctttaaacttaagtggtactttcttatcacacaaaacatctgagactcttctccatttcaaccatccagcttgaatatgatgagttacatatgcttctat 33495924  T
Q  143 ttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttctt 242  Q
    |||||| | |||||||||||| ||||||||||         ||||||| | |||||||||||||||| |||||||||||| ||||||||| ||||||||     
T  33495923 ttctccgttattttgtactatggacccaagat---------gtgtaac-tagggtatgatatgatcttcaactttcacctccaaggtagacctacttctc 33495834  T
Q  243 ctttgactagagttacattccatatactctgt 274  Q
    ||||   |  ||||||||||||||||||||||    
T  33495833 cttttgatgaagttacattccatatactctgt 33495802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 204
Target Start/End: Complemental strand, 26291587 - 26291444
Alignment:
Q  61 ctttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtac 160  Q
    |||||||||||||||||| ||  | |  | |||||||||||||||| ||||||| |||||| |||||| | | ||||||||||||||||||||||| |||    
T  26291587 ctttcttatcacataaaatacatgaggttattctacatttcaaccatccaacttgaatacgttgatttgcgtatgcttctatttctccatcattttctac 26291488  T
Q  161 tatagacccaagataattaaaccgtgtaacttggggtatgatat 204  Q
    ||| ||| ||||||| |||||| ||||||||| |||||||||||    
T  26291487 tatggactcaagatatttaaacggtgtaacttagggtatgatat 26291444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 239
Target Start/End: Complemental strand, 27790961 - 27790786
Alignment:
Q  64 tcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactat 163  Q
    ||||||||| ||||||||| | | |||||||  ||||||||||| |||||| | || ||||||||| |  ||||||||||| | | ||||||||||||||    
T  27790961 tcttatcacgtaaaacacttgaggctcttctctatttcaaccactcaactttattatgatgatttagacttgcttctatttatgcgtcattttgtactat 27790862  T
Q  164 agacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctactt 239  Q
     || |||||||| ||||||| ||||| |||| ||||  ||||| |||| || ||||||| || |||||| ||||||    
T  27790861 ggatccaagatatttaaaccatgtaatttggagtattttatgacctcccaccttcacctccatggtagaactactt 27790786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 6056209 - 6056329
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||| | | |||||||||||| || || ||||||||| ||||||||||| |   |||||||||||||||||||||||||||   ||||||      
T  6056209 tgtccgatagaattatcctttcaacttaaatgatattttcttatcgcataaaacacttgaagctcttctacatttcaaccacccaacttgcctacgatat 6056308  T
Q  126 tttacatctgcttctatttct 146  Q
    ||||||| |||||||||||||    
T  6056309 tttacatatgcttctatttct 6056329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 6641881 - 6642013
Alignment:
Q  58 gtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttg 157  Q
    |||||||| ||||||||||||||| || |    | || ||||||||||||||||||| ||| | ||| ||||||||| ||||||||||||  ||||||||    
T  6641881 gtactttcatatcacataaaacacccgaggtcatcctccatttcaaccacccaactttaattcaatggtttacatctccttctatttctctctcattttg 6641980  T
Q  158 tactatagacccaagataattaaaccgtgtaac 190  Q
    |||||||| || |||||  |||||| |||||||    
T  6641981 tactatagccctaagatgcttaaactgtgtaac 6642013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 608004 - 607902
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||||||||||  |||||||||  | ||||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  608004 gctgtccgatagaacttttctttcagtttaagtggtcatgtcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 607905  T
Q  124 gat 126  Q
    |||    
T  607904 gat 607902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 3632727 - 3632645
Alignment:
Q  158 tactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttc 240  Q
    |||||| || |||||||| ||||| ||||||| || |||||||||||||||||||||||||||||  |||||||| |||||||    
T  3632727 tactatggatccaagatatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtagaactacttc 3632645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 30679317 - 30679220
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||| |  |||||||  | | |||||||  |||||||||||||||||| ||||||||    
T  30679317 tgtctgatagaactttcctttcaacttatgtggtactttcttatcgctcaaaacacctgagcctcttctctatttcaaccacccaacttgaatacgat 30679220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 14030649 - 14030565
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccaccca 110  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||| || |||||||  | |||| |||| |||||||||||||||    
T  14030649 tgtccgatagaactttcatttcagcttaagtggtactttcttatcgcacaaaacacctgagactattctccatttcaaccaccca 14030565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 2065195 - 2065302
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactc-gggactcttctacatttcaaccacccaacttaaatacgatg 124  Q
    |||||||||||| ||| |||||||||||||  |||||||||||||| ||||||||| |   | ||||| | ||||||||| || || ||| |||||||||    
T  2065195 tgtccgatagaagtttcctttcaacttaagatgtactttcttatcaaataaaacacccaaagtctcttttccatttcaacaacacatcttgaatacgatg 2065294  T
Q  125 atttacat 132  Q
    ||||||||    
T  2065295 atttacat 2065302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 30670556 - 30670486
Alignment:
Q  201 atatgatctccaactttcacctgcaaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    |||||||||||||||||||||| ||||||| | |||||||| ||||  ||| || ||||||| ||||||||    
T  30670556 atatgatctccaactttcacctccaaggtatacctacttctccttttgctaaagatacattctatatactc 30670486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 12134357 - 12134421
Alignment:
Q  43 ctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacc 108  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| | ||| ||| |||||||||||||    
T  12134357 ctttcaactta-gtggtactttcgtatcacttaaaacactcgaggctcctctccatttcaaccacc 12134421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 7079867 - 7079801
Alignment:
Q  136 cttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgat 202  Q
    |||| ||||||||||| |||||||||||||||| |||||| | |||   ||||||||| ||||||||    
T  7079867 cttcaatttctccatcgttttgtactatagacctaagatattcaaattttgtaacttgtggtatgat 7079801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 13674636 - 13674570
Alignment:
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaactt 192  Q
    ||||||||||||||||||| | | ||||||| ||||||||| | | |||| |||||| |||||||||    
T  13674636 tttacatctgcttctatttttgcgtcattttttactatagatcaaggatatttaaactgtgtaactt 13674570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 19338458 - 19338547
Alignment:
Q  67 tatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcatttt 156  Q
    ||||||||||||||| ||   |||| || ||||||| | ||| ||||| ||| | ||||||||||||| |  ||||||||||||||||||    
T  19338458 tatcacataaaacacccgaagctctcctgcatttcatctacctaacttgaatcctatgatttacatctccccctatttctccatcatttt 19338547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 9e-76; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 1275110 - 1274863
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||    | ||||||| ||||||||||||||| ||| ||||||||    
T  1275110 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacaccttaggctcttcttcatttcaaccacccagcttgaatacgat 1275011  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||     
T  1275010 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcatctc 1274911  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| ||||  ||  |||||||||||||||||||    
T  1274910 caaggtagacctacttctcctttcgctgaagttacattccatatactc 1274863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 24 - 274
Target Start/End: Complemental strand, 3394558 - 3394306
Alignment:
Q  24 gctgtccgatagaacttttct---ttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatac 120  Q
    |||||||||||||||||| ||   |||| ||||||||||||||||||||| || |||||||  | | ||| ||| ||||||||||||||| ||| |||||    
T  3394558 gctgtccgatagaactttcctcctttcagcttaagtggtactttcttatcgcacaaaacacctgaggctcatctccatttcaaccacccagcttgaatac 3394459  T
Q  121 gatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcac 220  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3394458 gatgatttacatctgcttctatttctccgtcattttgtactatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcac 3394359  T
Q  221 ctgcaaggtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    || ||||||||| | |||||| ||||  || || ||||||||||||||||||||    
T  3394358 ctccaaggtagacccacttctccttttgct-gaattacattccatatactctgt 3394306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 12492824 - 12493071
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  12492824 gctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 12492923  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||     
T  12492924 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaacttttacctc 12493023  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    |||||||||||||||||| |||   ||  |||||||||||||||||||    
T  12493024 caaggtagagctacttctccttccgctgaagttacattccatatactc 12493071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 25 - 271
Target Start/End: Complemental strand, 3301693 - 3301447
Alignment:
Q  25 ctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatg 124  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| || |||||||  | | ||| |||  |||||||||||||| ||| |||||||||    
T  3301693 ctgtccgatagaactttcctttcaatttaagtggtactttcttatcgcacaaaacacctgaggctcatctctatttcaaccacccagcttgaatacgatg 3301594  T
Q  125 atttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgc 224  Q
    |||| ||||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  3301593 atttgcatctgcttctatttctccttcatttggtactatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctcc 3301494  T
Q  225 aaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    |||||||| | |||||| ||||  ||  |||||||||||||||||||    
T  3301493 aaggtagacccacttctccttttgctgaagttacattccatatactc 3301447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 10639142 - 10638895
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||| || |||||||    | ||||||| ||||||||||||||| ||| ||||||||    
T  10639142 gctgttcgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctaaggctcttctccatttcaaccacccagcttgaatacgat 10639043  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||     
T  10639042 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatttccaactttcacctc 10638943  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||  |||  |||||||||||||||||||    
T  10638942 caaggtagacctacttctccttccactgaagttacattccatatactc 10638895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 24 - 274
Target Start/End: Original strand, 2075911 - 2076161
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  || |||||||  | | ||||||| ||||||||||||||||||| ||||||||    
T  2075911 gctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttcttcatttcaaccacccaacttgaatacgat 2076010  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||  ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  2076011 ggcttacatctgcttctatttctctgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 2076110  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    ||||||||| || ||||| |||   ||  ||||||||||||| ||||||||    
T  2076111 caaggtagaactgcttctccttccgctgaagttacattccatgtactctgt 2076161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 24178369 - 24178122
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| || |||||||| | | ||||||| ||||||||||||||||||| |||| |||    
T  24178369 gctgcccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccaacttgaatatgat 24178270  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |     
T  24178269 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatctttaaaccgtgtaacttagggtatgatatgatctccaactttcacttc 24178170  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  24178169 caaggtagacctacttctccttccgctgaagttacattccatatactc 24178122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 1288026 - 1288273
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||| || |||||||  | | ||||||| ||||||||||| ||||||| ||||||||    
T  1288026 gctgttcgatagaactttcctttcaacttaaatggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccatccaacttgaatacgat 1288125  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  1288126 ggcttacatctgcttctatttctccgtcattttgtacgaaggactcaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 1288225  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    |||||||||  ||||||| |||   ||  |||||||||||||||||||    
T  1288226 caaggtagacttacttctccttccgctgaagttacattccatatactc 1288273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 26 - 271
Target Start/End: Original strand, 28977296 - 28977541
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || ||||||| || | ||||||| ||||||||||||||| ||| |||||||||     
T  28977296 tgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacccgaggctcttctccatttcaaccacccagcttgaatacgatgg 28977395  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
     |||||||| |||||||| |||| ||||||||||| |  ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  |    
T  28977396 cttacatctacttctattactccgtcattttgtacgaaggacccaagatatttaaaccgtgtgacttggggtatgatatgatctccaactttcacctcta 28977495  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||| |||||||| |||    |  |||||||||||||||||||    
T  28977496 aggtagacctacttctccttccgttgaagttacattccatatactc 28977541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 28 - 271
Target Start/End: Complemental strand, 20318828 - 20318589
Alignment:
Q  28 tccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatt 127  Q
    ||||||| |||||| |||||||||||||||||||||    ||| || |||||||  | | ||||||| ||||||||||||||| ||| |||| ||||  |    
T  20318828 tccgatataactttcctttcaacttaagtggtactt----atcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatatgatggct 20318733  T
Q  128 tacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaag 227  Q
    ||||||||||||||||||||| ||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20318732 tacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaag 20318633  T
Q  228 gtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||| |||||||| |||   ||  |||||||||||||||||||    
T  20318632 gtagaactacttctccttccgctgaagttacattccatatactc 20318589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 88 - 270
Target Start/End: Original strand, 16347904 - 16348085
Alignment:
Q  88 ctcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgt 187  Q
    ||||||| ||||||||||||| | ||| |||||||||||||||||  |||| ||||||||| |||||||||||||| ||| ||||||| |||||||||||    
T  16347904 ctcttctccatttcaaccaccta-cttgaatacgatgatttacatacgcttttatttctccgtcattttgtactatggacacaagatatttaaaccgtgt 16348002  T
Q  188 aacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttcttctttgactagagttacattccatatact 270  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||  ||  ||||||||| ||||||||    
T  16348003 aacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttttgctgaagttacatttcatatact 16348085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 36200625 - 36200405
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||| ||||| ||| ||||||||||||   | | ||||||||||||||||||||  | | ||||||| |||||||||||||||||||||||| |||||    
T  36200625 tgtccggtagaattttcctttcaacttaaacagcattttcttatcacataaaacacatgagtctcttctccatttcaaccacccaacttaaatatgatga 36200526  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    ||||||| |||| ||||||||   ||||||||||||||  |||||| ||| |||||| |||||||||| |||||||||||| |||| |||||||||| ||    
T  36200525 tttacatatgctactatttctatgtcattttgtactatgaacccaaaatatttaaacggtgtaacttgaggtatgatatgacctcccactttcacctcca 36200426  T
Q  226 aggtagagctacttcttcttt 246  Q
      ||||| |||||||| ||||    
T  36200425 tagtagaactacttctccttt 36200405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 43558272 - 43558449
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctattt 144  Q
    |||||||| || ||||||||  ||||||||||||||||   | || |||| |||||| || ||||  ||| ||| |||||||||||||||||||||||||    
T  43558272 ttcaacttgagcggtactttagtatcacataaaacactttaggctattctccatttccactaccctgcttgaattcgatgatttacatctgcttctattt 43558371  T
Q  145 ctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    |||  |  |||||||| || |||| |||||| ||||| ||||||||||| |||||| |||||||||||||||||||||    
T  43558372 ctctgtggttttgtacaatggacctaagatatttaaatcgtgtaacttgtggtatgctatgatctccaactttcacct 43558449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 27737 - 27622
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||| ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||  ||||| |||||||||||| |||| |||||    
T  27737 tgtcagatagaattttcctttcaacttaagtggtactttcttatcacgtaaaacactcgagactcttctctatttccaccacccaacttgaatatgatga 27638  T
Q  126 tttacatctgcttcta 141  Q
    ||||||| || |||||    
T  27637 tttacatttgattcta 27622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 27302421 - 27302599
Alignment:
Q  58 gtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttg 157  Q
    |||||||||||||||||||| ||     | ||||| | |||||||||||| |||||| |||||||||||||||||||   |||||||||||  | |||||    
T  27302421 gtactttcttatcacataaagcatatatggctcttttccatttcaaccactcaacttgaatacgatgatttacatct---tctatttctccgccgttttg 27302517  T
Q  158 tactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctactt 239  Q
    || ||| ||| ||||||| ||||||||||||  ||| ||||||||||||||||||||  |||||| ||||||||| ||||||    
T  27302518 tattatggacacaagatatttaaaccgtgtagtttgaggtatgatatgatctccaacactcaccttcaaggtagaactactt 27302599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 271
Target Start/End: Original strand, 17341748 - 17341885
Alignment:
Q  134 tgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagag 233  Q
    |||||||||||||| |||||||| |||||| ||||||| ||| ||||||| ||||| ||  |||||||||||||||||||||| ||||| |||||||||     
T  17341748 tgcttctatttctctatcattttctactatggacccaatatatttaaaccatgtaatttcaggtatgatatgatctccaacttccacctccaaggtagaa 17341847  T
Q  234 ctacttcttctttgactagagttacattccatatactc 271  Q
    | | ||   ||||  ||| |||||||||||||||||||    
T  17341848 ccatttggcctttttctaaagttacattccatatactc 17341885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 34272867 - 34272758
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||| ||||||||||||| ||||||||    
T  34272867 gctgtccgattgaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccattttaaccacccaacttgaatacgat 34272768  T
Q  124 gatttacatc 133  Q
    |  |||||||    
T  34272767 ggcttacatc 34272758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 43423582 - 43423648
Alignment:
Q  96 catttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtacta 162  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||||||    
T  43423582 catttcaaccacccaacttgaatatgatgatttacatctgcttctgtttctccgtcattttgtacta 43423648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 6368478 - 6368560
Alignment:
Q  140 tatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||||| || ||||||||||||||  ||||||| |||||  |||||||||| |||||| ||||||||||| |||||||||    
T  6368478 tatttctccgtcgttttgtactatagatacaagatatttaaattgtgtaacttgtggtatgttatgatctccatctttcacct 6368560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 3096901 - 3096829
Alignment:
Q  150 tcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||| | |  ||||||||||| |||||||||||    
T  3096901 tcattttgtactataaacccaagatatttaaaccatgtaacttgtgctgagatatgatctctaactttcacct 3096829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 21915619 - 21915533
Alignment:
Q  136 cttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||||||| | | |||||||||||| || |||| ||| |||||||||||||||||   |||||||| ||||| |||||||||||    
T  21915619 cttctatttcttcgttattttgtactattgaaccaatatatttaaaccgtgtaacttgtattatgatataatctcgaactttcacct 21915533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 222
Target Start/End: Complemental strand, 25937804 - 25937719
Alignment:
Q  137 ttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||||||   ||| ||||| |||| ||||||||||| ||||   |||||| |||||| |||||||||||||||||||||||||    
T  25937804 ttctatttctttgtcaatttgtgctatggacccaagatatttaatttgtgtaatttggggaatgatatgatctccaactttcacct 25937719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 20077297 - 20077389
Alignment:
Q  67 tatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgta 159  Q
    |||||||||||||||  | | ||||||| ||||||||||| ||||| | || | |||||||| |||||||||  |||||||| ||||||||||    
T  20077297 tatcacataaaacacctgaggctcttctccatttcaaccatccaacctgaaaatgatgatttgcatctgctttaatttctccgtcattttgta 20077389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 232
Target Start/End: Complemental strand, 37124391 - 37124207
Alignment:
Q  48 aacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctc 147  Q
    ||||| |||||||||||| | |||||||||||||||  | | ||||| |||| |||||| | | |||  ||  || |||||||||| |||||||||  |     
T  37124391 aacttgagtggtactttcatttcacataaaacactcacggcacttcttcattgcaaccatcgagcttggatttgacgatttacatcggcttctattgatt 37124292  T
Q  148 catcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtaga 232  Q
    | |  ||||| | ||| ||| |||| || ||||||  |||||||||  ||||||| |||||||||||||||||||  ||||||||    
T  37124291 cgttcttttgcaatatggactcaagctatttaaacaatgtaacttgttgtatgatttgatctccaactttcacctctaaggtaga 37124207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 16347817 - 16347860
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttat 69  Q
    |||||||||||||||| |||||||||||||||||| ||||||||    
T  16347817 tgtccgatagaactttcctttcaacttaagtggtaatttcttat 16347860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 38579064 - 38579130
Alignment:
Q  150 tcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactt 216  Q
    ||||||||||||||  || ||||||| |||||| |||||||||| | ||| ||||||||||||||||    
T  38579064 tcattttgtactatcaactcaagatatttaaactgtgtaacttgtgctataatatgatctccaactt 38579130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 28676407 - 28676330
Alignment:
Q  56 tggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatc 133  Q
    |||||||||| |||||||||||| ||||| | ||||||| |||||||  ||||||   | ||||||||||||||||||    
T  28676407 tggtactttcatatcacataaaatactcgaggctcttctccatttcattcacccataatgaatacgatgatttacatc 28676330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 35685590 - 35685507
Alignment:
Q  134 tgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaacttt 217  Q
    ||||||||||||||  ||||||||||||||| | |||| ||| ||||||  ||| ||||| | ||||||||| ||| |||||||    
T  35685590 tgcttctatttctctttcattttgtactataaatccaatatatttaaactatgttacttgtgatatgatatgctcttcaacttt 35685507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 14100061 - 14099971
Alignment:
Q  129 acatctgcttctatttctccatcattttgtactatagacccaagataattaaac-cgtgtaacttggggtatgatatgatctccaactttc 218  Q
    |||||| ||||||||||||  || |||||||||||||| ||||| || ||||||  |||||  ||  |||||||||||||||| |||||||    
T  14100061 acatctacttctatttctctgtcgttttgtactatagagccaagttatttaaacgtgtgtagtttatggtatgatatgatctctaactttc 14099971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 16779509 - 16779419
Alignment:
Q  42 tctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacat 132  Q
    ||||||||||| | |||||||||| ||||||||||||||   | | ||||||| |||||||||||| ||| || |||  |||| |||||||    
T  16779509 tctttcaacttgaatggtactttcgtatcacataaaacatctgagtctcttctccatttcaaccactcaaattgaatttgatggtttacat 16779419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 28676308 - 28676253
Alignment:
Q  89 tcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttc 145  Q
    |||||| |||||||||||| || ||| ||||||||||||| ||| ||||||||||||    
T  28676308 tcttctccatttcaaccacaca-cttgaatacgatgatttgcatatgcttctatttc 28676253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 9e-76; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 436074 - 435827
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| |||||||||||| || ||| ||||||||    
T  436074 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccactcagcttgaatacgat 435975  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    || |||||||||||||||||||||| ||||||| ||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  435974 gacttacatctgcttctatttctccgtcattttatacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 435875  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  435874 caaggtagacctacttctccttccgctgaagttacattccatatactc 435827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 23906738 - 23906985
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  23906738 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 23906837  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  23906838 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 23906937  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||    |  |||||||||||||||||||    
T  23906938 caaggtagacctacttctccttccgttgaagttacattccatatactc 23906985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 33227054 - 33226807
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  | |||||||  | ||||||||| ||||||||||||||| ||| |||| |||    
T  33227054 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgtacaaaacacctgagactcttctccatttcaaccacccagcttgaatatgat 33226955  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  33226954 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 33226855  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||| | |||   ||  |||||||||||||||||||    
T  33226854 caaggtagacctacttgtccttccgctgaagttacattccatatactc 33226807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 24 - 274
Target Start/End: Original strand, 31960251 - 31960501
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||   | | ||||||| ||||||||||||||| ||| |||| |||    
T  31960251 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacatatgaggctcttctccatttcaaccacccagcttgaatatgat 31960350  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||     
T  31960351 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaaattggggtatgatatgatctccaactttcacctc 31960450  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    ||||||||| |||||||| |||   ||  ||||||||||||||||||||||    
T  31960451 caaggtagacctacttctccttccgctgaagttacattccatatactctgt 31960501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 26 - 271
Target Start/End: Original strand, 27450612 - 27450857
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||| ||||||| ||| |||||| ||||||||||||||||||||| || |||||||| | | ||||||| ||||||||||||||| ||| ||||||||||    
T  27450612 tgtctgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgatga 27450711  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  27450712 tttacatctgcttctatttctccatcattttgcactatggacccaagatatgtaaactgtgtaacttggggtatgatatgatctccaactttcacctcca 27450811  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||| | | |||||| ||||  ||  |||||||||||| ||||||    
T  27450812 aggtatacccacttctccttttgctgaagttacattccaaatactc 27450857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 1777452 - 1777699
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  1777452 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 1777551  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    || |||||| ||||||||||||||  ||||||||||| |  ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||     
T  1777552 gacttacatttgcttctatttctctgtcattttgtacgaaggacccaagatatttaaaacgtgtaacttggggtatgatatgatttccaactttcacctc 1777651  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  1777652 caaggtagacctacttctccttccgctgaagttacattccatatactc 1777699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 48174530 - 48174777
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  || |||||||  | | ||||||| ||||||||||||| | ||| ||||||||    
T  48174530 gctgtccgatagaactttcctttcaacttaagtggtactttcttattgcacaaaacacctgaggctcttctccatttcaaccacctagcttgaatacgat 48174629  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||| ||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  48174630 ggcttacatctgcttctatttctccgtcactttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 48174729  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  48174730 caaggtagacctacttctccttccgctgaagttacattccatatactc 48174777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 48622964 - 48623211
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | || |||| ||||||||||||||| ||| ||||||||    
T  48622964 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggcttttctccatttcaaccacccagcttgaatacgat 48623063  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||     
T  48623064 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaatcgtgtaatttggggtatgatatgctctccaactttcacctc 48623163  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  48623164 caaggtagacctacttctccttccgctgaagttacattccatatactc 48623211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 53707639 - 53707392
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||   | | ||||||| ||||||||||||||| ||| ||||||||    
T  53707639 gctggccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacatctgagtctcttctccatttcaaccacccagcttgaatacgat 53707540  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||     
T  53707539 ggcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttagaccgtgtaacttggggtatgatatgatcttcaactttcacctc 53707440  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||  |||  |||||||||| ||||||||    
T  53707439 caaggtagacctacttctccttccactgaagttacattcgatatactc 53707392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 56375135 - 56374888
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||| || |||||||  | | |||||||  |||||||||||||| ||| ||||||||    
T  56375135 gctgtccgatagatctttcctttcaaattaagtggtactttcttatcgcacaaaacacctgaggctcttctcaatttcaaccacccagcttgaatacgat 56375036  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  ||| |||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||     
T  56375035 ggcttatatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgctctccaactttcacctc 56374936  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  56374935 caaggtagacctacttctccttccgctgaagttacattccatatactc 56374888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 26 - 266
Target Start/End: Complemental strand, 16002771 - 16002532
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||  | | |||||||  ||||||||||| || ||||||||||||||    
T  16002771 tgtctgataaaacttttctttgaacttaagtggtactttcttatcacacaaaacacctgaggctcttctcaatttcaaccactcagcttaaatacgatga 16002672  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    ||||||||||||||||| ||||| |||||||||||||| || |||||||  ||||||||||||| ||||||||||||||||| ||||||||| |||| ||    
T  16002671 tttacatctgcttctatgtctccgtcattttgtactatggaaccaagat-tttaaaccgtgtaatttggggtatgatatgatttccaacttttacctcca 16002573  T
Q  226 aggtagagctacttcttctttgactagagttacattccata 266  Q
    |||||||   |||||| ||||  ||| ||||| ||||||||    
T  16002572 aggtagactaacttctccttttgctaaagttatattccata 16002532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 50286814 - 50286625
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| || |||||||  | ||||||||| ||||||||||||||| ||| |||||||||     
T  50286814 tgtccgatagaactttcctttcaacttaaatggtactttcttatcgcacaaaacacatgtgactcttcttcatttcaaccacccagcttgaatacgatgg 50286715  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaact 215  Q
     |||||||||||||||||||||| ||||||||||| |  ||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  50286714 cttacatctgcttctatttctccgtcattttgtacgaaggacacaatatatttaaaccgtgtaacttggggtatgatatgatctccaact 50286625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 29 - 271
Target Start/End: Complemental strand, 39708298 - 39708055
Alignment:
Q  29 ccgatagaacttttctttcaacttaagtggtactttcttatcacataaaac-actcgggactcttctacatttcaaccacccaacttaaatacgatgatt 127  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||    | ||||| | ||||||||||| ||| ||| ||||||| ||||    
T  39708298 ccgatagaactttcctttcaacttaagtggtactttcttatcacaaaaaaccacctaaggctcttatccatttcaaccatccagcttgaatacgaggatt 39708199  T
Q  128 tacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaag 227  Q
    |||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||  ||||||| ||||| ||||||||||||| |||||||| ||||    
T  39708198 tacacctgcttctatttctccgtcattttgtactatcgacccaagatatttaaaccgcataacttgaggtataatatgatctccaaatttcacctccaag 39708099  T
Q  228 gtagagctacttcttctttgactagagttacattccatatactc 271  Q
     |||| ||| |||| ||||  ||  ||||| |||||||||||||    
T  39708098 atagacctaattctccttttgctgaagttatattccatatactc 39708055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 26 - 270
Target Start/End: Original strand, 47265641 - 47265887
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtact---ttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacga 122  Q
    |||| |||||||||||  |||||||||||||||||||   |||||||| || |||||||    | ||||||| |||||||| |||||| ||| || ||||    
T  47265641 tgtcagatagaactttcatttcaacttaagtggtactactttcttatcgcacaaaacacctaaggctcttcttcatttcaatcacccagcttgaa-acga 47265739  T
Q  123 tgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||  |||||| ||||||||||||||| ||||||| |||||| || |||||||| ||||||  |||||||||||||||||||||| |||||||||||||||    
T  47265740 tggcttacatttgcttctatttctccgtcattttatactatggatccaagatatttaaactatgtaacttggggtatgatatgacctccaactttcacct 47265839  T
Q  223 gcaaggtagagctacttcttctttgactagagttacattccatatact 270  Q
     ||||||||| |||||||| ||||  ||  ||||||||| ||||||||    
T  47265840 ccaaggtagacctacttctccttttgctgaagttacatttcatatact 47265887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 1211829 - 1212017
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| | |||||| | | | ||||||| ||||||||| ||| ||||| ||||||||||    
T  1211829 tgtccgatagaactttcctttcaacttaagtggtattttcttatcatacaaaacatttgaggctcttctccatttcaactacctaacttgaatacgatga 1211928  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaac 214  Q
    |||||| |||||||||||||||  | |||||||||||| ||| ||||||| ||||||  |||||| |  ||||||||||||||||||||    
T  1211929 tttacacctgcttctatttctctgttattttgtactatggacacaagatatttaaactatgtaacgtaaggtatgatatgatctccaac 1212017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 39754829 - 39755006
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctattt 144  Q
    |||||||||||||||| ||||  ||||||||||||||| | | | ||  | ||||||||||||  |||||  || | ||||||||||||| |||||||||    
T  39754829 ttcaacttaagtggtattttcgcatcacataaaacacttgaggcactggttcatttcaaccactaaacttggattcaatgatttacatctccttctattt 39754928  T
Q  145 ctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||   || |||||||||||||||||| |||| |||||  |||| ||||| ||||||||||||||| ||||||||||||    
T  39754929 ctttgtcgttttgtactatagacccatgatatttaaagtgtgtgacttgtggtatgatatgatcttcaactttcacct 39755006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 43433763 - 43433643
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||| || |||||||  | | ||||||| |||||||| |||||| ||| ||||||||    
T  43433763 gctgtccgatagaactttcctttcaacttaagtgacactttcttatcgcacaaaacacctgaggctcttctccatttcaatcacccagcttgaatacgat 43433664  T
Q  124 gatttacatctgcttctattt 144  Q
    | |||||||||||||||||||    
T  43433663 ggtttacatctgcttctattt 43433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 46583261 - 46583397
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    ||||||| |||||||||| ||||||| ||||||| |||||||||||| || |||| ||  | | ||||||| ||||||||||||||| ||| |||| |||    
T  46583261 gctgtccaatagaactttcctttcaaattaagtgatactttcttatcgcacaaaatacctgaggctcttctccatttcaaccacccagcttgaatatgat 46583360  T
Q  124 gatttacatctgcttctatttctccatcattttgtac 160  Q
    |  |||||||||||||||||||||| |||||||||||    
T  46583361 ggcttacatctgcttctatttctccgtcattttgtac 46583397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 54787744 - 54787878
Alignment:
Q  86 gactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgt 185  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||||||| | ||||||  | |||||||||| | |||| |||||| |||||||||    
T  54787744 gactattctccatttcaaccacccaacttaaatacgattatttacatctgcttttttttctctgtgattttgtactctggaccaaagatatttaaaccgt 54787843  T
Q  186 gtaacttggggtatgatatgatctccaactttcac 220  Q
    ||||  |||||| ||||| | ||| ||||||||||    
T  54787844 gtaatctggggtttgatacgttcttcaactttcac 54787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 10775975 - 10776050
Alignment:
Q  143 ttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttc 218  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  10775975 ttctccatcattttgtattatagacccaagatatttaaaccatgtaacttgtggtatgatatgatctccaactttc 10776050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 17666496 - 17666670
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctattt 144  Q
    ||||||||||  ||||| ||  |||||||||||||||  |   ||||||| ||||||||| | ||||||| ||||||||||||||||| ||||| |||||    
T  17666496 ttcaacttaaagggtacgtttgtatcacataaaacacatgatgctcttctccatttcaacaatccaacttgaatacgatgatttacatttgcttttattt 17666595  T
Q  145 ctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    || |  ||||||||||| |  |||||||||| |||||| |||||||||   ||||||||||||||| ||| |||||||    
T  17666596 cttcgacattttgtactttgaacccaagatatttaaactgtgtaactt---gtatgatatgatctctaacgttcacct 17666670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 54914631 - 54914781
Alignment:
Q  29 ccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgattt 128  Q
    ||||||||| ||| |||||||||||||||||| |||||||||||||||||||| |    || |||| ||||||||||||   | || ||||| | |||||    
T  54914631 ccgatagaattttcctttcaacttaagtggtattttcttatcacataaaacac-caaagcttttctccatttcaaccacatgatttgaatacaaggattt 54914729  T
Q  129 acatctgcttctatttctccatcattttgtactatagacccaagataattaa 180  Q
    ||||||| |||||||||||||||||||| ||| || ||||||||||| ||||    
T  54914730 acatctgtttctatttctccatcattttataccatggacccaagatatttaa 54914781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 35690147 - 35690016
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||| ||||||| ||| || |||||||||  || |||||||||||||||||||||| ||  |||||||| ||||||||||||||||||| ||||||||||    
T  35690147 tgtctgatagaattttcctctcaacttaaacggcactttcttatcacataaaacacccgc-actcttctccatttcaaccacccaacttgaatacgatga 35690049  T
Q  126 tttacatctgcttctatttctccatcattttgtactat 163  Q
    ||||||     ||||||||||||  |||||||||||||    
T  35690048 tttaca-----ttctatttctccggcattttgtactat 35690016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 1629204 - 1629084
Alignment:
Q  96 catttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggg 195  Q
    |||||||||||| ||| || |||||||||||||||||||||||||||||||||||| |||| ||||||  |  ||||||| ||||||  ||||||||| |    
T  1629204 catttcaaccactcaagttgaatacgatgatttacatctgcttctatttctccatcgttttatactatgaattcaagatatttaaactatgtaacttgtg 1629105  T
Q  196 gtatgatatgatctccaactt 216  Q
    | | ||||||||||| |||||    
T  1629104 gcacgatatgatctcaaactt 1629084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 7092721 - 7092847
Alignment:
Q  96 catttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggg 195  Q
    ||||||||||||||||||| ||||  ||||| ||||||||| ||||||| | | | ||||| |||||||||||||  ||| ||||||||||||| ||  |    
T  7092721 catttcaaccacccaacttgaataatatgatgtacatctgcatctatttattcgttattttatactatagacccacaatatttaaaccgtgtaatttaag 7092820  T
Q  196 gtatgatatgatctccaactttcacct 222  Q
     ||||||||||||| ||||||||||||    
T  7092821 atatgatatgatcttcaactttcacct 7092847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 30807331 - 30807245
Alignment:
Q  136 cttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||||||||  |||||||||||||||||| | | | | ||||||||||||||||| ||||||||||||||||||||||||||||    
T  30807331 cttctatttctcagtcattttgtactatagactccaaacatttaaaccgtgtaacttgtggtatgatatgatctccaactttcacct 30807245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 55578814 - 55578687
Alignment:
Q  89 tcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgta 188  Q
    |||||| ||||| ||||||| ||||||||||||||||||||  | ||||||||||||||  ||||||| ||||||||| |||||||| |||||   |  |    
T  55578814 tcttctccattttaaccacctaacttaaatacgatgatttatgtatgcttctatttctcagtcattttatactatagatccaagatatttaaa---tcaa 55578718  T
Q  189 acttggggtatgatatgatctccaactttca 219  Q
    | ||| |||||||||||||||| ||||||||    
T  55578717 atttgtggtatgatatgatctcaaactttca 55578687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 42037604 - 42037510
Alignment:
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcac 220  Q
    ||||||||| ||| ||||||||  |||||||||||||||||  ||||||| ||||||||||||||||| || |||||||||||| ||| ||||||    
T  42037604 tttacatctccttatatttctcagtcattttgtactatagattcaagatatttaaaccgtgtaacttgtgggatgatatgatcttcaaatttcac 42037510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 41009789 - 41009922
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacac-tcggg--actcttctacatttcaaccacccaacttaaatacga 122  Q
    ||||| ||||||||||| |  |||||||||||||| |||||||||| | ||| ||| || |   | |||||| ||||||||||||| ||||| |||||||    
T  41009789 tgtccaatagaacttttttcccaacttaagtggtattttcttatcatacaaatcacctcagattaatcttctccatttcaaccacctaacttgaatacga 41009888  T
Q  123 tgatttacatctgcttctatttctccatcatttt 156  Q
     ||||||||| ||||||||||||||| |||||||    
T  41009889 agatttacatttgcttctatttctccgtcatttt 41009922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 52280650 - 52280806
Alignment:
Q  39 ttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgctt 138  Q
    ||||| ||||||||  | ||||||||| || |||  ||||||  || ||| ||||| |||||||||||| |||| | |||||||| |||||||  |||||    
T  52280650 ttttccttcaacttgggcggtactttcataccacgcaaaacatgcgagacccttctccatttcaaccacacaacgtgaatacgattatttacacttgctt 52280749  T
Q  139 ctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggg 195  Q
    |  ||||||| | |||||||||| ||||||||| ||| ||||| |||||||| ||||    
T  52280750 cagtttctcctttattttgtactttagacccaaaatatttaaatcgtgtaacctggg 52280806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 17667845 - 17667979
Alignment:
Q  103 accacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgat 202  Q
    |||| ||||||| ||||||||||||||||| ||| | |||||||   ||||||||||||||  |||||| ||| ||||||  | ||||||   |||||||    
T  17667845 accatccaacttgaatacgatgatttacatttgcgtttatttctaagtcattttgtactatgaacccaatatatttaaactatataactt---gtatgat 17667941  T
Q  203 atgatctccaactttcacctgcaaggtagagctacttc 240  Q
    ||||| ||||||||||||||  |||||| | |||||||    
T  17667942 atgatatccaactttcacctctaaggtataactacttc 17667979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 41427610 - 41427468
Alignment:
Q  97 atttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttgggg 196  Q
    |||||||||||||||||| |||  |||| |||  |  ||||| ||||||||| ||||| ||||||||   | ||||||| ||||  ||||||||||||||    
T  41427610 atttcaaccacccaacttgaatgtgatg-tttgtacttgcttatatttctccgtcattctgtactatgagcacaagatatttaagtcgtgtaacttgggg 41427512  T
Q  197 tatgatatgatctccaactttcacctgcaaggtagagctacttc 240  Q
    ||||||||||||| ||| |||||| |  |||||||| |||||||    
T  41427511 tatgatatgatcttcaattttcacttttaaggtagaactacttc 41427468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 3273232 - 3273098
Alignment:
Q  59 tactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgt 158  Q
    ||||||| ||||||||||||||   | | ||| ||| ||||||||||| ||||||| ||| ||||| |||| || |||||||||||||   || ||||||    
T  3273232 tactttcgtatcacataaaacaaatgaggctcatctccatttcaaccatccaacttgaattcgatggtttatatttgcttctatttctttgtcgttttgt 3273133  T
Q  159 actatagacccaagataattaaaccgtgtaacttg 193  Q
    ||||| |||| |||||  |||||  ||||||||||    
T  3273132 actatggacctaagatgtttaaattgtgtaacttg 3273098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 20917731 - 20917630
Alignment:
Q  120 cgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttca 219  Q
    |||||| |||||| || |||||||||||| |  |||| |||||| || |   |||| |||||| |||||||||  ||||||||||||||| |||||||||    
T  20917731 cgatgacttacatatgtttctatttctccgttgttttatactatggagctcggatatttaaactgtgtaacttatggtatgatatgatcttcaactttca 20917632  T
Q  220 cc 221  Q
    ||    
T  20917631 cc 20917630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 30853131 - 30853066
Alignment:
Q  154 tttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttca 219  Q
    |||||||||| ||||||||||| |||||| ||||| |||| ||||||| ||| ||||||| |||||    
T  30853131 tttgtactatggacccaagatatttaaactgtgtagcttgtggtatgacatgttctccaaatttca 30853066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 8917807 - 8917899
Alignment:
Q  67 tatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgta 159  Q
    |||||||||||||||| | | |||||||  |||||||  | ||||||| || |||||||||||  ||||||| ||||||||  ||||||||||    
T  8917807 tatcacataaaacacttgaggctcttctcaatttcaattatccaacttgaaaacgatgatttatgtctgcttttatttctctgtcattttgta 8917899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 45185482 - 45185542
Alignment:
Q  88 ctcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctcc 148  Q
    ||||||| | ||||||||||  | ||| ||||| |||||||||||||||||||||||||||    
T  45185482 ctcttctccctttcaaccactaagcttgaatacaatgatttacatctgcttctatttctcc 45185542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 55768943 - 55769022
Alignment:
Q  153 ttttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtaga 232  Q
    ||||||||||| | |  || ||| ||||||||||| ||||| ||||||| ||||||| ||||||||||||  ||||||||    
T  55768943 ttttgtactatgggcataaaatatttaaaccgtgttacttgtggtatgacatgatcttcaactttcacctctaaggtaga 55769022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 55833199 - 55833278
Alignment:
Q  153 ttttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtaga 232  Q
    ||||||||||| | |  || ||| ||||||||||| ||||| ||||||| ||||||| ||||||||||||  ||||||||    
T  55833199 ttttgtactatgggcataaaatatttaaaccgtgttacttgtggtatgacatgatcttcaactttcacctctaaggtaga 55833278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 52569954 - 52569992
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtacttt 64  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  52569954 tgtccaatagaactttcctttcaacttaagtggtacttt 52569992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 4e-75; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 28 - 274
Target Start/End: Complemental strand, 36544993 - 36544747
Alignment:
Q  28 tccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatt 127  Q
    ||||||||||||||  ||||||||||||||||||||||||||| || |||||||  | | ||||| | ||||||||||||||||||| |||||||||| |    
T  36544993 tccgatagaactttcttttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttatccatttcaaccacccaacttgaatacgatgact 36544894  T
Q  128 tacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaag 227  Q
    ||||||||||||||||||||| ||||||||||| | || |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  36544893 tacatctgcttctatttctccgtcattttgtacgaaagccccatgatatttaaaccttgtaacttggggtatgatatgatctccaactttcacctccaag 36544794  T
Q  228 gtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    ||||| |||||||| |||   ||| ||||||||||||||||||||||    
T  36544793 gtagacctacttctccttccgctaaagttacattccatatactctgt 36544747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 24 - 241
Target Start/End: Original strand, 36565678 - 36565895
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  36565678 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 36565777  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  36565778 ggcttacatctgcttctatttctccgtcattttgtacaaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 36565877  T
Q  224 caaggtagagctacttct 241  Q
    ||||||||| ||||||||    
T  36565878 caaggtagacctacttct 36565895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 26 - 271
Target Start/End: Original strand, 4032933 - 4033178
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||||||| |||| |||||    
T  4032933 tgtccgataaaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccaacttgaatatgatga 4033032  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    ||||||| ||||| ||||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||    
T  4033033 tttacatatgcttttatttctccatcattgtgtactatgaacccaagatacttaaaccgtgtaacttggggtatgatatgatctccaactttcatctcca 4033132  T
Q  226 aggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||| || || || ||||  ||  |||||||||||||||||||    
T  4033133 aggtagaccttctactccttttgctgaagttacattccatatactc 4033178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 12492279 - 12492526
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||||| | ||||||||    
T  12492279 gctgtccgatagaactttcctttcatcttaagtggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccaacctgaatacgat 12492378  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
       |||||||||||||||||||||| ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  12492379 agcttacatctgcttctatttctccgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 12492478  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||| | |||   ||  |||||||||||||||||||    
T  12492479 caaggtagacctacttatccttccgctgaagttacattccatatactc 12492526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 24 - 246
Target Start/End: Original strand, 42854441 - 42854663
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||| ||| |||||| ||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  42854441 gctgtccgatagaattttcctttcagcttaagtggtactttcttatcgcacaaaacacatgaggctcttctccatttcaaccacccagcttgaatacgat 42854540  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |||||||||||||||||||||||| | |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||     
T  42854541 gatttacatctgcttctatttctcaaacattttgtacgatggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccacctttcacctc 42854640  T
Q  224 caaggtagagctacttcttcttt 246  Q
    ||||||||| | |||||| ||||    
T  42854641 caaggtagacccacttctccttt 42854663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 24 - 271
Target Start/End: Original strand, 8879871 - 8880118
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    |  ||||||  |||||||||| ||||| | ||||||||    
T  8879871 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcgcacaaaacacctaaggttcttctctatttcaaccatccaacatgaatacgat 8879970  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    | | | |||||| |||||||||||| ||||||||||||||   ||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||||     
T  8879971 gctattcatctggttctatttctccttcattttgtactatgagcccaagatatttaaaccgtgtaacttgggatatgatatgattttcaactttcacctt 8880070  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    || ||| || |||||||| ||||  ||  ||||||||| ||| |||||    
T  8880071 cacggtcgacctacttctccttttgctgaagttacatttcatgtactc 8880118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 25 - 271
Target Start/End: Original strand, 15215709 - 15215954
Alignment:
Q  25 ctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatg 124  Q
    |||| |||||||||||| |||||| |||||||| |||||||||| | || || ||||| | | ||||||| ||||||||||||| | ||| |||||||||    
T  15215709 ctgttcgatagaactttcctttcagcttaagtgatactttcttaccgcacaagacactggaggctcttctccatttcaaccacctagcttgaatacgatg 15215808  T
Q  125 atttacatctgctt-ctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |||||||||||||| ||||||||   ||| |||||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||     
T  15215809 atttacatctgctttctatttctg--tcactttgtactatggacccaatatatttaaaccgtgtaactttgggtatgatatgatctccaactttcacctc 15215906  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    || |||||| | |||||| ||||  ||  ||||||||| ||| |||||    
T  15215907 catggtagacccacttctccttttgctgaagttacatttcatgtactc 15215954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 62 - 232
Target Start/End: Complemental strand, 13984841 - 13984672
Alignment:
Q  62 tttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtact 161  Q
    ||||||||||||||||||||| | | ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||   ||||||| ||||    
T  13984841 tttcttatcacataaaacacttgaggctcttcttcatttcaaccatccaacttaaatacgatgatttacatctgcttttatttctttgtcatttt-tact 13984743  T
Q  162 atagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtaga 232  Q
    || ||||||||||| |||||||||||| |||||||||||||||||||| |  ||||||||| |||||||||    
T  13984742 atggacccaagatatttaaaccgtgtatcttggggtatgatatgatcttcttctttcaccttcaaggtaga 13984672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 248
Target Start/End: Complemental strand, 18125018 - 18124799
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||  | |  | |||| |||||||||||  || ||| ||| ||||||    
T  18125018 tgtccgatagaactttcctttcaact-aagtggtactttcttatcacataaaacacctgaggtttttctccatttcaaccattcagcttgaattcgatga 18124920  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
     ||||||||||||||||||||||||||||||||| ||| ||  ||| ||| ||||||| | |||||| || |||| ||||||||| |||||| ||||  |    
T  18124919 gttacatctgcttctatttctccatcattttgtattatgga--caaaatatttaaaccatataacttaggatatggtatgatctcaaacttttaccttta 18124822  T
Q  226 aggtagagctacttcttctttga 248  Q
    || ||||  ||||||| ||||||    
T  18124821 agatagacatacttctcctttga 18124799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 25439374 - 25439249
Alignment:
Q  31 gatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttac 130  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||| || ||||||||| ||||||||||| ||  |||  ||||||||||||||    
T  25439374 gatagaactttcctttcaacttaagtggtactttcttatcacacaaaacacccgagactcttctccatttcaaccatcctgcttgcatacgatgatttac 25439275  T
Q  131 atctgcttctatttctccatcatttt 156  Q
    || ||||||||||||||| |||||||    
T  25439274 atatgcttctatttctccgtcatttt 25439249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 239
Target Start/End: Complemental strand, 29735653 - 29735447
Alignment:
Q  25 ctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatg 124  Q
    ||||||||||||| |||  ||||||||||||  || |||||||| || |||| ||||  |  |||| ||| ||||||||||||||||||| |||| ||||    
T  29735653 ctgtccgatagaattttcatttcaacttaagcagtgctttcttaccagataacacacatga-actcatctccatttcaaccacccaacttgaataagatg 29735555  T
Q  125 atttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgc 224  Q
    |||||||| ||||||||||||||| |||||||| ||||| |||         ||||| ||| ||||||||||||||||||||||||| |||||||||| |    
T  29735554 atttacatatgcttctatttctccgtcattttgaactatggac-------gtttaaatcgtataacttggggtatgatatgatctcccactttcacctcc 29735462  T
Q  225 aaggtagagctactt 239  Q
    | |||||| ||||||    
T  29735461 atggtagaactactt 29735447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 246
Target Start/End: Original strand, 28300588 - 28300764
Alignment:
Q  67 tatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactataga 166  Q
    ||||||||||||||  || | ||||||| || || ||||| ||||||| ||||||||||| ||||||||||| ||| ||||  ||||||||||| ||  |    
T  28300588 tatcacataaaacatccgagtctcttctccaatttaaccatccaacttgaatacgatgatgtacatctgcttttatatctcagtcattttgtaccatgaa 28300687  T
Q  167 cccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttcttcttt 246  Q
    ||||||||| |||||| |||||||||   ||||||||||||||||| |||||||||  ||||| || ||||||| |||||    
T  28300688 cccaagatatttaaactgtgtaactt---gtatgatatgatctccagctttcacctctaaggtcgaactacttcgtcttt 28300764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 19293779 - 19293913
Alignment:
Q  86 gactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgt 185  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||||||| | ||||||  | |||||||||| | |||| |||||| |||||||||    
T  19293779 gactattctccatttcaaccacccaacttaaatacgattatttacatctgcttttttttctctgtgattttgtactctggaccaaagatatttaaaccgt 19293878  T
Q  186 gtaacttggggtatgatatgatctccaactttcac 220  Q
    ||||  |||||| ||||| | ||| ||||||||||    
T  19293879 gtaatctggggtttgatacgttcttcaactttcac 19293913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 270
Target Start/End: Original strand, 33830716 - 33830913
Alignment:
Q  70 cacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagaccc 169  Q
    ||||||||||||| | |||||||| |||||| ||||| ||||||| || |||||||||||||| ||||| ||||||| | ||||||||||| || |||||    
T  33830716 cacataaaacacttgagactcttcaacattttaaccatccaacttgaacacgatgatttacatatgcttttatttcttcgtcattttgtacaatggaccc 33830815  T
Q  170 aagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttcttctttgactagagttacattccatatac 269  Q
    || ||| |||||| |||||||||    ||||||| ||| |||||||||||  |  |||||||| ||||||| || ||  ||| | ||||||| |||||||    
T  33830816 aaaatatttaaactgtgtaactt---atatgataagatatccaactttcatgtctaaggtagaactacttcgtcgtttgctaaaattacattacatatac 33830912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 217
Target Start/End: Original strand, 30113640 - 30113827
Alignment:
Q  30 cgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgattta 129  Q
    ||||| || ||||||||||||||||  |||| ||||||||||||||||||||  | ||||||||| |||||||||||   | ||| ||||| ||||||||    
T  30113640 cgatataatttttctttcaacttaatcggta-tttcttatcacataaaacacctgcgactcttctccatttcaaccatttagcttgaatacaatgattta 30113738  T
Q  130 catctgcttc-tatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaacttt 217  Q
    |||||||||| | ||||||| ||||||| || || |||  ||||||| || |||  | ||| |||| ||||||||||||||||||||||    
T  30113739 catctgcttcttttttctccgtcattttatattacagattcaagatatttgaactatataatttggagtatgatatgatctccaacttt 30113827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 25300075 - 25299950
Alignment:
Q  31 gatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttac 130  Q
    ||||||||||| |||||||||||| ||||||||||||||| || |||||||  | | ||||||| |||||||| | |||  |||  ||||||||||||||    
T  25300075 gatagaactttcctttcaacttaattggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaaccccctgcttgcatacgatgatttac 25299976  T
Q  131 atctgcttctatttctccatcatttt 156  Q
    || |||||||||||| ||||||||||    
T  25299975 atatgcttctatttccccatcatttt 25299950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 25985283 - 25985189
Alignment:
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||||| |||||||||||||||  |||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||  ||||||||||||||    
T  25985283 tttacatctccttctatttctccatatttttgtactatagatccaatatatttaaaccgtgtaacttgtggtatgatatga--tccaactttcacct 25985189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 37077591 - 37077490
Alignment:
Q  43 ctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctat 142  Q
    ||||||||||||||||||||| ||||||||| |||||||  | ||||||||| ||||||||||||  | ||| |||||||||||||||||| ||||||||    
T  37077591 ctttcaacttaagtggtacttacttatcacacaaaacacctgagactcttctccatttcaaccacttagcttgaatacgatgatttacatcggcttctat 37077492  T
Q  143 tt 144  Q
    ||    
T  37077491 tt 37077490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 38667329 - 38667206
Alignment:
Q  97 atttcaaccacccaacttaaatacgatgatttacatctgcttctatttctccatcattttgtactatagacccaagataatt-aaaccgtgtaacttggg 195  Q
    |||||||||| ||||||| ||||||||||||||||||| ||| |||||||| ||| |||||||||||  |||||||||| || ||||  ||||||||       
T  38667329 atttcaaccatccaactttaatacgatgatttacatcttcttttatttctctatcgttttgtactatgaacccaagatatttaaaactttgtaactt--- 38667233  T
Q  196 gtatgatatgatctccaactttcacct 222  Q
    |||||||||||||||||| ||||||||    
T  38667232 gtatgatatgatctccaagtttcacct 38667206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 197
Target Start/End: Original strand, 6510862 - 6511028
Alignment:
Q  33 tagaacttttctttcaacttaagtggtactttcttatcacat-aaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgattta-c 130  Q
    ||||||||| |||||||||||||  ||||||||||||||||| ||| |||  | ||||||||| |||||||||||| |||||| ||| | ||||||||      
T  6510862 tagaactttcctttcaacttaagcagtactttcttatcacatcaaaccacatgagactcttctccatttcaaccactcaacttgaatgcaatgatttatg 6510961  T
Q  131 atctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggt 197  Q
    | ||||||| |||||||| ||| ||| |||||  || |||||||| ||| ||| |||||||||||||    
T  6510962 acctgcttccatttctccttcactttatactacggatccaagatatttataccatgtaacttggggt 6511028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 41444838 - 41444939
Alignment:
Q  122 atgatttacatctgcttctatttctccatcattttgtactataga-cccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcac 220  Q
    ||||||||||  ||||||||||||| ||||||||||||  || || ||||||||| |||||||  |||||||| |||||||||||||||||| |||||||    
T  41444838 atgatttacacttgcttctatttctacatcattttgtatcattgaacccaagatatttaaaccaagtaacttgtggtatgatatgatctccacctttcac 41444937  T
Q  221 ct 222  Q
    ||    
T  41444938 ct 41444939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 13589270 - 13589087
Alignment:
Q  39 ttttctttcaacttaagtggtactttcttatcacataaaacac-tcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgct 137  Q
    ||||| ||||| |||| | ||||||||||||  |||||||||| || || ||||||| ||||||||||| ||| ||| |||| | |||||| ||| ||||    
T  13589270 ttttccttcaagttaaatagtactttcttatagcataaaacacatcagg-ctcttctccatttcaaccatccaccttgaatatggtgattttcatatgct 13589172  T
Q  138 tctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||||| ||||||||| |||||  ||||||| ||  ||  | | ||||||||||| | ||||||||||||  ||||||||||    
T  13589171 tctatttcttcatcattttatactaacgacccaatatttttgtatcatgtaacttgggatttgatatgatctctcactttcacct 13589087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 25288740 - 25288613
Alignment:
Q  31 gatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaacca--cccaacttaaatacgatgattt 128  Q
    ||||||||||| |||||||||||| ||||||||||||||| || |||||||  | | ||||||| |||||||| ||  |||  |||  ||||||||||||    
T  25288740 gatagaactttcctttcaacttaattggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaacaccccctgcttgcatacgatgattt 25288641  T
Q  129 acatctgcttctatttctccatcatttt 156  Q
    |||| |||||||||||| || |||||||    
T  25288640 acatatgcttctatttccccgtcatttt 25288613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 39946702 - 39946602
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| || |||||||    | ||||||| ||||||||||| ||| ||| ||||||||    
T  39946702 gctgtccgatagaactttcctttcaatttaagtggtactttcttatcgcacaaaacacctaaggctcttctccatttcaaccatccagcttgaatacgat 39946603  T
Q  124 g 124  Q
    |    
T  39946602 g 39946602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 18849656 - 18849750
Alignment:
Q  121 gatgatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcac 220  Q
    |||||||||||| ||||||||||||||| ||| ||| |||||       |||||| ||||||||||||||||||||||||||||||||||||| ||| ||    
T  18849656 gatgatttacatttgcttctatttctccgtcactttatacta-------aagatatttaaaccgtgtaacttggggtatgatatgatctccaatttttac 18849748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 36395390 - 36395436
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatc 70  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  36395390 gctgtccgatagaactttcctttcaacttaagtggtactttcttatc 36395436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 45332039 - 45332117
Alignment:
Q  139 ctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaacttt 217  Q
    ||||||||||| | |||||||||||  | ||| |||| ||||||||||||||||| ||||||| |||||||||||||||    
T  45332039 ctatttctccaccgttttgtactatgaagccaggatatttaaaccgtgtaacttgtggtatgacatgatctccaacttt 45332117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 10824546 - 10824609
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacc 108  Q
    |||||||||| ||||| |||| |||||||||||||||  | ||||||||| |||||||||||||    
T  10824546 ttcaacttaactggtattttcgtatcacataaaacacctgagactcttctccatttcaaccacc 10824609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 16917012 - 16916974
Alignment:
Q  43 ctttcaacttaagtggtactttcttatcacataaaacac 81  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16917012 ctttcaacttaagtggtactttcatatcacataaaacac 16916974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 43732234 - 43732279
Alignment:
Q  177 ttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||||||| ||||| | ||||||||||||||||||||||||||    
T  43732234 ttaaaccgtgttacttgtgctatgatatgatctccaactttcacct 43732279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 2796398 - 2796354
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatc 70  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||||    
T  2796398 tgtccaatataactttcctttcaacttaagtggtactttcttatc 2796354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 38328265 - 38328406
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctattt 144  Q
    ||||||||||  |||| |||| |||||||||||||||    ||| || || ||||||||| |||||||||| || | |||||||||||   || |||| |    
T  38328265 ttcaacttaaacggtattttcatatcacataaaacacctaagacactccttcatttcaactacccaacttagattcaatgatttacat---ctcctatat 38328361  T
Q  145 ctccatcattttgtactatagacccaagataattaaaccgtgtaac 190  Q
     || ||| ||||||||| |||||| |||||| ||||||| ||||||    
T  38328362 atctatcgttttgtact-tagacctaagatatttaaaccttgtaac 38328406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 43732406 - 43732359
Alignment:
Q  67 tatcacataaaacactcgggactcttctacatttcaaccacccaactt 114  Q
    ||||||||| |||||| | ||||||||| |||||||||||||||||||    
T  43732406 tatcacatataacacttgagactcttctccatttcaaccacccaactt 43732359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 15853938 - 15853975
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacact 82  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15853938 ttcaacttgagtggtactttcgtatcacataaaacact 15853975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 24 - 232
Target Start/End: Original strand, 2707 - 2915
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||  | | ||||||| ||||||||||||||| ||| ||||||||    
T  2707 gctgtccgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaccacccagcttgaatacgat 2806  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    || |||||||||||||||||||| | ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  2807 gacttacatctgcttctatttcttcgtcattttgtacgaaggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctc 2906  T
Q  224 caaggtaga 232  Q
    ||| |||||    
T  2907 caatgtaga 2915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 31313 - 31066
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||| || |||||||| | | ||||||| ||||||||||||||| ||| ||||||||    
T  31313 gctgttcgatagaactttcctttcaacttaagtggtactttcttatcgcacaaaacacttgaggctcttctccatttcaaccacccagcttgaatacgat 31214  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |   ||||||| ||| ||||||||| ||||||||||| |  ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |     
T  31213 ggcctacatctacttttatttctccgtcattttgtacgaaggacccaagatgtttaaaccgtgtaacttggggtatgatatgatctccaactttcacttc 31114  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatatactc 271  Q
    ||||||||| |||||||| |||   ||  |||||||||||||||||||    
T  31113 caaggtagacctacttctccttccgctgaagttacattccatatactc 31066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 24 - 268
Target Start/End: Original strand, 12035 - 12279
Alignment:
Q  24 gctgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgat 123  Q
    |||| |||||| |||||| |||| |||||||| |||||||||||||| || |||||||| | |  |||||| ||||||||| ||||| ||||||||||||    
T  12035 gctgaccgataaaactttccttttaacttaagaggtactttcttatcgcacaaaacacttgaggttcttctccatttcaacgacccagcttaaatacgat 12134  T
Q  124 gatttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctg 223  Q
    |  |||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||      
T  12135 ggcttacatatgcttctatttctccgtcattttgtactatggacccaagatatttaaaccatgtaacttggggtatgatatgatctccaactttcaccgc 12234  T
Q  224 caaggtagagctacttcttctttgactagagttacattccatata 268  Q
     |||||||| |||||||| ||||  ||  |||||||||| |||||    
T  12235 gaaggtagacctacttctccttttgctgaagttacattctatata 12279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 26 - 241
Target Start/End: Complemental strand, 82564 - 82349
Alignment:
Q  26 tgtccgatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatga 125  Q
    |||||||||||||||| |||||||||||||  ||||||||||||| || |||||||  | | |||||   |||| |||||||||| ||| ||||||||||    
T  82564 tgtccgatagaactttcctttcaacttaaggagtactttcttatcgcacaaaacacatgaggctctttcccattgcaaccacccagcttgaatacgatga 82465  T
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgca 225  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||| ||| ||    
T  82464 tttacatctgcttctatttctccgtcattttttactatggacccaagatatttaaaccgtgtaacttgtggtatgatataatctccaactttcgcctcca 82365  T
Q  226 aggtagagctacttct 241  Q
    ||| ||| ||||||||    
T  82364 aggcagacctacttct 82349  T

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Target: scaffold0171 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 5911 - 5815
Alignment:
Q  150 tcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttcttcttt 246  Q
    |||||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| || | |||||||| ||||    
T  5911 tcattttgtattgtggacccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaagatataactacttctccttt 5815  T

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Target: scaffold0045 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 87066 - 87204
Alignment:
Q  44 tttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctatt 143  Q
    |||||||||||||| |||||||||||  |||||||| | || | || |||| ||||||||||| | ||| | |||| ||||| ||||||||| |||||||    
T  87066 tttcaacttaagtgatactttcttattgcataaaacccccgaggcttttctccatttcaaccatcaaacatgaatatgatgagttacatctgattctatt 87165  T
Q  144 tctccatcattttgtactatagacccaagataattaaac 182  Q
    |||||  |||||| |||||| ||||||||||| ||||||    
T  87166 tctccgacattttatactatggacccaagatatttaaac 87204  T

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Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 88514 - 88610
Alignment:
Q  178 taaaccgtgtaacttggggtatgatatgatctccaactttcacctgcaaggtagagctacttcttctttgactagagttacattccatatactctgt 274  Q
    |||||| |||||||||  ||||| |||||| |||| |||||| || ||||||| | |||||||| ||||  ||  ||||||||||||||||||||||    
T  88514 taaaccatgtaacttgaagtatggtatgatttccatctttcatctccaaggtaaacctacttctccttttgctgaagttacattccatatactctgt 88610  T

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Target: scaffold1493 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 29 - 156
Alignment:
Q  31 gatagaacttttctttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaacca--cccaacttaaatacgatgattt 128  Q
    ||||||||||| |||||||||||| ||||||||||||||| || |||||||  | | ||||||| |||||||| ||  |||  |||  ||||||||||||    
T  29 gatagaactttcctttcaacttaattggtactttcttatcgcacaaaacacctgaggctcttctccatttcaaacaccccctgcttgcatacgatgattt 128  T
Q  129 acatctgcttctatttctccatcatttt 156  Q
    |||| |||||||||||| || |||||||    
T  129 acatatgcttctatttccccgtcatttt 156  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 213
Target Start/End: Original strand, 48405 - 48574
Alignment:
Q  45 ttcaacttaagtggtactttcttatcacataaaacactcgggactcttctacatttcaaccacccaacttaaatacgatgatttacatctgcttctattt 144  Q
    |||||||| |||||||  ||| ||| | ||||||| || | |||| |||| |||||||||||| |||||| |||| |||||||||  | |||||||||||    
T  48405 ttcaacttgagtggtagcttcgtattatataaaacgcttgagacttttcttcatttcaaccacacaacttgaatatgatgatttatgt-tgcttctattt 48503  T
Q  145 ctccatcattttgtactatagacccaagataattaaaccgtgtaacttgggg--tatgatatgatctccaa 213  Q
     |||  |||  |||||||| ||   |||||| ||||||  ||||||||||||  ||||||| |||||||||    
T  48504 atcctccatgatgtactatggattgaagatacttaaactttgtaacttggggtatatgatacgatctccaa 48574  T

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Target: scaffold0606 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 9400 - 9304
Alignment:
Q  126 tttacatctgcttctatttctccatcattttgtactatagacccaagataattaaaccgtgtaacttggggtatgatatgatctccaactttcacct 222  Q
    ||||||||| |||| |||||| |||| |||| || |||| ||| |||||| ||||| |||||||||     ||||||||||||||||||||| ||||    
T  9400 tttacatctccttccatttcttcatcgttttataatataaacctaagatatttaaatcgtgtaactaataatatgatatgatctccaacttttacct 9304  T

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