View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16741_low_53 (Length: 272)
Name: NF16741_low_53
Description: NF16741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16741_low_53 |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 34747109 - 34747367
Alignment:
| Q |
1 |
agcacatagtaatcaaaaaattatttgtactttcttttatatttgtatttcacaataactaactacatcaattcactatttgcaatagtagttattgtca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
34747109 |
agcacatagtaatcaaaaaattatttgtactttcttttatatttgtatttgacaataactaactacatcaattcattatttgcaatagtagttattgtca |
34747208 |
T |
|
| Q |
101 |
actcactctttaatctccttttcaaattccattcatatgctgcgaatacaaagtgttgcccttttattccctccaccaaagctaagttcatcatgtcttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34747209 |
actcactctttaatctccttttcaaattccattcatatgctgcgaatacaaagtgttgcccttttattccctccaccaaagctaagttcatcatgtcttc |
34747308 |
T |
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| Q |
201 |
aattttttaggtgtacaatttgtcttcaatttgacgtgacatgcgataaacaaatattt |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
34747309 |
aattttttaggtgtacaatttgtcttcaatttgacgtgacatgtgataaacaaatattt |
34747367 |
T |
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