View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16741_low_60 (Length: 262)
Name: NF16741_low_60
Description: NF16741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16741_low_60 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 21 - 259
Target Start/End: Complemental strand, 43409675 - 43409438
Alignment:
| Q |
21 |
tatgccataaacaactatttatatgattattcttcaaaatcatataagnnnnnnnngtacttgtcagctacttaagtgtcctagaaggtttctattcaca |
120 |
Q |
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| T |
43409675 |
tatgccataaacaactatttatatgattattcttcaaaatcatataagaaaaaaa-gtacttgtcagctacttaagtgtcctagaaggtttctattcaca |
43409577 |
T |
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| Q |
121 |
ccataaatttgaaaattttcagccactagttaactgaatttggacagagaaggacacctaattagatggcatataatttaatgaaaccacatgatcaaaa |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43409576 |
ccataaatttgaaaattttcagccactagttaactgaatttggacagagaaggacacctaattagatggcatataatttaatgaaaccacatgatcaaaa |
43409477 |
T |
|
| Q |
221 |
ccaaactcaagatgaaatgaaattcatatttatattcat |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
43409476 |
ccaaactcaagatgaaatgaaattcatatttatattcat |
43409438 |
T |
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