View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16742_high_2 (Length: 828)

Name: NF16742_high_2
Description: NF16742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16742_high_2
NF16742_high_2
[»] chr1 (58 HSPs)
chr1 (237-551)||(16964902-16965220)
chr1 (335-551)||(15232775-15232990)
chr1 (268-551)||(49801640-49801920)
chr1 (1-140)||(16964663-16964805)
chr1 (273-420)||(46318435-46318582)
chr1 (362-538)||(45584913-45585089)
chr1 (465-551)||(15234048-15234134)
chr1 (313-549)||(48096890-48097122)
chr1 (269-437)||(14478401-14478570)
chr1 (316-437)||(48527669-48527790)
chr1 (315-437)||(52078003-52078125)
chr1 (313-437)||(9226071-9226196)
chr1 (371-549)||(16963859-16964034)
chr1 (244-457)||(51445707-51445918)
chr1 (269-457)||(5612897-5613082)
chr1 (311-532)||(44999315-44999535)
chr1 (315-538)||(15072647-15072870)
chr1 (305-548)||(35943295-35943537)
chr1 (295-438)||(9485149-9485286)
chr1 (406-551)||(49802846-49802988)
chr1 (376-437)||(13147336-13147397)
chr1 (241-437)||(46467281-46467477)
chr1 (314-425)||(13894760-13894872)
chr1 (397-457)||(34350228-34350288)
chr1 (313-432)||(10722233-10722352)
chr1 (269-457)||(26286530-26286715)
chr1 (335-429)||(26802083-26802178)
chr1 (399-538)||(16123323-16123460)
chr1 (376-437)||(3617417-3617478)
chr1 (299-437)||(6049267-6049406)
chr1 (237-346)||(23091569-23091679)
chr1 (269-417)||(24517428-24517578)
chr1 (294-421)||(40109509-40109638)
chr1 (318-410)||(7306116-7306209)
chr1 (364-437)||(15746675-15746747)
chr1 (465-538)||(24499662-24499735)
chr1 (313-425)||(10711935-10712047)
chr1 (350-437)||(18821632-18821720)
chr1 (313-432)||(46110421-46110543)
chr1 (381-428)||(9482599-9482646)
chr1 (364-457)||(41873879-41873969)
chr1 (335-548)||(50444577-50444788)
chr1 (399-538)||(14470892-14471029)
chr1 (463-549)||(51042348-51042433)
chr1 (364-417)||(12665945-12665998)
chr1 (314-410)||(27556431-27556527)
chr1 (439-538)||(52628854-52628953)
chr1 (273-370)||(42245778-42245872)
chr1 (360-437)||(27814427-27814504)
chr1 (355-432)||(46111395-46111472)
chr1 (397-437)||(23091487-23091527)
chr1 (364-428)||(28050465-28050529)
chr1 (368-538)||(41872612-41872780)
chr1 (269-411)||(51299441-51299584)
chr1 (465-538)||(15071378-15071451)
chr1 (237-282)||(16123587-16123632)
chr1 (364-429)||(51300168-51300233)
chr1 (509-538)||(52627551-52627580)
[»] chr3 (54 HSPs)
chr3 (268-551)||(10731940-10732222)
chr3 (236-551)||(53614053-53614366)
chr3 (268-551)||(35370936-35371212)
chr3 (268-551)||(26886295-26886576)
chr3 (270-551)||(41264468-41264746)
chr3 (268-531)||(27841518-27841783)
chr3 (270-538)||(3208520-3208788)
chr3 (267-457)||(34819094-34819285)
chr3 (314-536)||(53622700-53622910)
chr3 (360-538)||(38242419-38242596)
chr3 (237-548)||(53420342-53420655)
chr3 (269-427)||(46368953-46369110)
chr3 (465-551)||(27837943-27838029)
chr3 (465-551)||(53612894-53612980)
chr3 (304-538)||(53624210-53624441)
chr3 (269-457)||(49379819-49380005)
chr3 (269-437)||(13621055-13621223)
chr3 (355-432)||(10301074-10301151)
chr3 (355-424)||(10338886-10338955)
chr3 (465-550)||(35372165-35372250)
chr3 (351-430)||(14745095-14745174)
chr3 (357-432)||(3455526-3455600)
chr3 (351-538)||(42684912-42685097)
chr3 (376-547)||(10730912-10731080)
chr3 (364-457)||(12107887-12107979)
chr3 (465-538)||(18458664-18458737)
chr3 (446-551)||(26887543-26887648)
chr3 (317-410)||(37415157-37415252)
chr3 (371-437)||(48083362-48083428)
chr3 (314-410)||(44602901-44602997)
chr3 (269-358)||(50809563-50809652)
chr3 (269-358)||(50866210-50866299)
chr3 (269-417)||(53194425-53194573)
chr3 (314-458)||(21074137-21074280)
chr3 (313-418)||(24487176-24487280)
chr3 (465-538)||(50809457-50809530)
chr3 (465-538)||(50866332-50866405)
chr3 (495-551)||(41263661-41263717)
chr3 (371-548)||(38240932-38241105)
chr3 (315-406)||(54110143-54110233)
chr3 (466-548)||(37736089-37736171)
chr3 (390-431)||(11224776-11224817)
chr3 (269-358)||(50810719-50810808)
chr3 (465-538)||(50810841-50810914)
chr3 (465-538)||(50864950-50865023)
chr3 (269-358)||(50865056-50865145)
chr3 (335-411)||(11219588-11219664)
chr3 (271-358)||(43174593-43174679)
chr3 (350-428)||(7270467-7270546)
chr3 (465-548)||(18197173-18197256)
chr3 (348-410)||(28909498-28909561)
chr3 (510-549)||(36176559-36176598)
chr3 (439-498)||(53187634-53187693)
chr3 (510-539)||(3209983-3210012)
[»] chr8 (57 HSPs)
chr8 (562-806)||(30403771-30404013)
chr8 (268-538)||(32695087-32695355)
chr8 (335-551)||(13117511-13117726)
chr8 (272-437)||(24192478-24192644)
chr8 (360-551)||(42098586-42098776)
chr8 (270-538)||(32798344-32798612)
chr8 (308-437)||(20180525-20180655)
chr8 (269-538)||(42870849-42871119)
chr8 (297-417)||(17455202-17455322)
chr8 (237-548)||(8571394-8571707)
chr8 (313-457)||(9854735-9854878)
chr8 (465-551)||(17338064-17338150)
chr8 (364-538)||(45281096-45281268)
chr8 (438-551)||(13116353-13116466)
chr8 (348-539)||(4810504-4810691)
chr8 (439-551)||(17339530-17339642)
chr8 (364-548)||(44076269-44076453)
chr8 (313-458)||(31845652-31845793)
chr8 (364-473)||(42877720-42877825)
chr8 (371-551)||(42100022-42100199)
chr8 (270-425)||(40437409-40437565)
chr8 (314-548)||(6397809-6398041)
chr8 (364-437)||(10669353-10669426)
chr8 (465-548)||(211621-211704)
chr8 (465-548)||(240552-240635)
chr8 (465-548)||(725244-725327)
chr8 (465-548)||(793907-793990)
chr8 (355-457)||(43202214-43202313)
chr8 (351-538)||(26697728-26697912)
chr8 (364-538)||(32693866-32694037)
chr8 (357-432)||(42878732-42878806)
chr8 (373-438)||(42362668-42362732)
chr8 (386-505)||(42872120-42872236)
chr8 (364-456)||(14840807-14840896)
chr8 (269-421)||(22620035-22620191)
chr8 (360-456)||(38696427-38696520)
chr8 (264-411)||(6398323-6398471)
chr8 (465-538)||(28418842-28418915)
chr8 (467-538)||(32797174-32797245)
chr8 (364-410)||(37400942-37400988)
chr8 (237-282)||(22551298-22551343)
chr8 (349-437)||(24305177-24305266)
chr8 (364-437)||(30786812-30786885)
chr8 (465-548)||(212719-212802)
chr8 (465-548)||(239452-239535)
chr8 (465-548)||(726342-726425)
chr8 (465-548)||(792807-792890)
chr8 (465-548)||(798843-798926)
chr8 (351-418)||(13513571-13513638)
chr8 (351-418)||(13603104-13603171)
chr8 (493-548)||(23702983-23703038)
chr8 (493-548)||(23708784-23708839)
chr8 (360-410)||(32552457-32552507)
chr8 (465-538)||(6398504-6398577)
chr8 (465-538)||(26696568-26696641)
chr8 (269-358)||(28418948-28419037)
chr8 (465-538)||(28420181-28420254)
[»] chr2 (43 HSPs)
chr2 (268-551)||(18616817-18617099)
chr2 (268-551)||(29219408-29219689)
chr2 (268-551)||(29332707-29332988)
chr2 (268-551)||(1085198-1085479)
chr2 (267-538)||(17459289-17459565)
chr2 (270-548)||(42641672-42641950)
chr2 (270-538)||(32469184-32469452)
chr2 (335-538)||(43033118-43033319)
chr2 (241-457)||(34513336-34513551)
chr2 (269-457)||(8320871-8321064)
chr2 (366-548)||(11317277-11317458)
chr2 (465-551)||(18615539-18615625)
chr2 (469-551)||(29220887-29220969)
chr2 (469-551)||(29334186-29334268)
chr2 (313-457)||(4920916-4921057)
chr2 (364-538)||(6030377-6030550)
chr2 (465-551)||(34468981-34469067)
chr2 (269-391)||(35903719-35903844)
chr2 (269-437)||(28611066-28611233)
chr2 (463-551)||(44192451-44192539)
chr2 (465-551)||(6030628-6030714)
chr2 (364-457)||(11547776-11547868)
chr2 (313-437)||(43034336-43034451)
chr2 (364-420)||(35903659-35903715)
chr2 (446-551)||(1083011-1083116)
chr2 (239-437)||(34467641-34467848)
chr2 (270-548)||(28562620-28562899)
chr2 (465-547)||(6032321-6032403)
chr2 (386-538)||(11315969-11316118)
chr2 (493-551)||(44191159-44191217)
chr2 (364-457)||(34464086-34464176)
chr2 (273-354)||(7436685-7436766)
chr2 (389-430)||(16295150-16295191)
chr2 (465-538)||(17460691-17460764)
chr2 (507-546)||(249052-249091)
chr2 (348-411)||(7983590-7983653)
chr2 (493-548)||(12359714-12359769)
chr2 (348-430)||(30748621-30748704)
chr2 (241-437)||(34512947-34513149)
chr2 (360-410)||(23232330-23232380)
chr2 (367-404)||(16290705-16290742)
chr2 (337-429)||(25570753-25570846)
chr2 (294-424)||(30749161-30749293)
[»] chr6 (31 HSPs)
chr6 (269-551)||(17837639-17837920)
chr6 (269-551)||(29381542-29381823)
chr6 (268-551)||(5187433-5187715)
chr6 (268-551)||(18346563-18346843)
chr6 (269-551)||(23392237-23392520)
chr6 (371-551)||(29380214-29380391)
chr6 (298-538)||(7311565-7311804)
chr6 (269-457)||(11722903-11723090)
chr6 (371-551)||(23397270-23397447)
chr6 (465-551)||(17839146-17839232)
chr6 (465-551)||(6701403-6701489)
chr6 (439-551)||(6702852-6702963)
chr6 (465-551)||(2687253-2687339)
chr6 (399-551)||(32506969-32507119)
chr6 (465-551)||(2687931-2688017)
chr6 (465-551)||(29722686-29722772)
chr6 (389-539)||(12669758-12669906)
chr6 (269-437)||(11967351-11967523)
chr6 (465-551)||(5186591-5186677)
chr6 (493-551)||(12256619-12256677)
chr6 (269-358)||(232316-232405)
chr6 (460-538)||(232212-232288)
chr6 (269-344)||(1367567-1367642)
chr6 (509-548)||(27082195-27082234)
chr6 (465-538)||(15730036-15730110)
chr6 (510-548)||(34024116-34024154)
chr6 (269-358)||(233454-233543)
chr6 (493-538)||(233599-233644)
chr6 (465-538)||(6452320-6452393)
chr6 (465-538)||(6452518-6452591)
chr6 (336-429)||(7312923-7313016)
[»] chr7 (52 HSPs)
chr7 (237-551)||(13564020-13564332)
chr7 (270-548)||(32255015-32255290)
chr7 (268-551)||(22537582-22537862)
chr7 (277-551)||(22336002-22336274)
chr7 (268-548)||(11502235-11502512)
chr7 (270-538)||(43460636-43460903)
chr7 (268-457)||(46835791-46835980)
chr7 (308-437)||(44372864-44372994)
chr7 (308-437)||(44381720-44381850)
chr7 (269-538)||(47060288-47060555)
chr7 (446-551)||(13562845-13562950)
chr7 (364-489)||(40811405-40811529)
chr7 (313-437)||(43441481-43441605)
chr7 (364-548)||(3413558-3413740)
chr7 (351-430)||(35295841-35295920)
chr7 (314-437)||(16756006-16756128)
chr7 (360-457)||(39981434-39981529)
chr7 (313-457)||(41328336-41328478)
chr7 (439-551)||(22538829-22538941)
chr7 (397-538)||(40509675-40509814)
chr7 (365-457)||(46201249-46201338)
chr7 (438-551)||(24844284-24844397)
chr7 (316-437)||(30334503-30334622)
chr7 (407-549)||(11501205-11501344)
chr7 (465-548)||(3414841-3414924)
chr7 (397-538)||(22115105-22115244)
chr7 (465-551)||(22337378-22337463)
chr7 (237-457)||(25533306-25533523)
chr7 (364-437)||(669297-669369)
chr7 (314-538)||(47059144-47059371)
chr7 (360-427)||(2414890-2414957)
chr7 (399-538)||(41078792-41078930)
chr7 (313-410)||(48312202-48312300)
chr7 (349-537)||(47454374-47454559)
chr7 (364-538)||(40508414-40508586)
chr7 (404-538)||(32256344-32256475)
chr7 (465-548)||(24282983-24283065)
chr7 (465-538)||(43459491-43459564)
chr7 (348-411)||(4167609-4167672)
chr7 (364-538)||(4299956-4300128)
chr7 (379-437)||(15992270-15992328)
chr7 (465-538)||(45454074-45454147)
chr7 (465-547)||(40738845-40738928)
chr7 (510-549)||(45455424-45455463)
chr7 (349-432)||(47456276-47456359)
chr7 (269-411)||(26406283-26406425)
chr7 (510-548)||(30311521-30311559)
chr7 (476-549)||(534084-534157)
chr7 (476-549)||(537339-537412)
chr7 (465-538)||(32602969-32603042)
chr7 (493-538)||(33779119-33779164)
chr7 (465-538)||(47456382-47456455)
[»] chr5 (29 HSPs)
chr5 (268-551)||(30910764-30911048)
chr5 (268-538)||(30858982-30859252)
chr5 (268-538)||(22047768-22048038)
chr5 (267-538)||(39603889-39604158)
chr5 (270-432)||(36898791-36898957)
chr5 (294-548)||(22308636-22308889)
chr5 (268-457)||(11262509-11262705)
chr5 (313-457)||(1102736-1102877)
chr5 (269-437)||(9220270-9220441)
chr5 (377-551)||(30912084-30912255)
chr5 (364-538)||(27705223-27705396)
chr5 (364-551)||(33173867-33174053)
chr5 (298-417)||(4127089-4127214)
chr5 (335-457)||(15548354-15548478)
chr5 (298-421)||(13520640-13520764)
chr5 (364-538)||(8521291-8521461)
chr5 (364-473)||(1010274-1010379)
chr5 (317-432)||(10735903-10736018)
chr5 (313-538)||(325041-325265)
chr5 (357-432)||(1009325-1009399)
chr5 (360-437)||(324174-324251)
chr5 (465-538)||(39605476-39605549)
chr5 (319-384)||(11797395-11797461)
chr5 (313-411)||(223384-223484)
chr5 (438-538)||(22049116-22049216)
chr5 (348-411)||(7426799-7426862)
chr5 (343-401)||(17420474-17420531)
chr5 (465-547)||(22307535-22307617)
chr5 (264-364)||(22048942-22049043)
[»] chr4 (65 HSPs)
chr4 (268-551)||(7707611-7707893)
chr4 (267-534)||(2312295-2312558)
chr4 (268-551)||(23201869-23202150)
chr4 (272-437)||(44498596-44498762)
chr4 (315-538)||(6349407-6349633)
chr4 (360-548)||(52239903-52240090)
chr4 (269-457)||(56085465-56085650)
chr4 (337-470)||(27850816-27850951)
chr4 (364-538)||(1794447-1794621)
chr4 (269-538)||(27847714-27847979)
chr4 (465-551)||(10168790-10168876)
chr4 (294-551)||(13165519-13165774)
chr4 (269-457)||(26496122-26496308)
chr4 (310-431)||(34326868-34326989)
chr4 (313-425)||(36845557-36845669)
chr4 (366-505)||(15449984-15450122)
chr4 (364-551)||(33231412-33231597)
chr4 (465-546)||(33232704-33232785)
chr4 (269-457)||(1519929-1520114)
chr4 (313-457)||(40723345-40723484)
chr4 (313-432)||(52138648-52138769)
chr4 (465-551)||(54866638-54866723)
chr4 (364-538)||(6348191-6348362)
chr4 (313-458)||(26629908-26630049)
chr4 (368-538)||(42810115-42810283)
chr4 (314-432)||(49896441-49896560)
chr4 (364-551)||(50546929-50547114)
chr4 (414-538)||(1588045-1588169)
chr4 (397-551)||(4714042-4714195)
chr4 (313-538)||(1829789-1830009)
chr4 (298-437)||(19750135-19750275)
chr4 (298-437)||(19789531-19789671)
chr4 (377-538)||(7708710-7708868)
chr4 (371-538)||(11968547-11968713)
chr4 (371-437)||(4871629-4871695)
chr4 (465-551)||(10167448-10167534)
chr4 (348-457)||(28590795-28590904)
chr4 (314-410)||(23103866-23103962)
chr4 (277-539)||(37884098-37884358)
chr4 (313-411)||(38555134-38555234)
chr4 (465-538)||(50548230-50548303)
chr4 (495-551)||(23203990-23204046)
chr4 (465-548)||(53205490-53205573)
chr4 (353-458)||(53432179-53432281)
chr4 (269-421)||(41349339-41349493)
chr4 (348-428)||(7053321-7053402)
chr4 (314-410)||(45535207-45535303)
chr4 (465-551)||(54865128-54865213)
chr4 (465-549)||(42871120-42871204)
chr4 (345-428)||(56157384-56157468)
chr4 (364-456)||(8682756-8682845)
chr4 (465-538)||(2310959-2311032)
chr4 (465-538)||(4129029-4129102)
chr4 (264-374)||(392522-392633)
chr4 (364-539)||(1587217-1587390)
chr4 (345-428)||(36243663-36243747)
chr4 (509-548)||(393689-393728)
chr4 (467-538)||(42872308-42872379)
chr4 (465-538)||(1188879-1188952)
chr4 (465-538)||(37882870-37882943)
chr4 (269-326)||(40724729-40724786)
chr4 (465-538)||(40792787-40792860)
chr4 (465-533)||(49344016-49344085)
chr4 (465-538)||(53204397-53204470)
chr4 (364-437)||(53435661-53435734)
[»] scaffold0118 (1 HSPs)
scaffold0118 (268-538)||(43386-43655)
[»] scaffold0077 (2 HSPs)
scaffold0077 (267-538)||(53997-54265)
scaffold0077 (414-538)||(52628-52749)
[»] scaffold0031 (2 HSPs)
scaffold0031 (364-548)||(125138-125323)
scaffold0031 (300-538)||(124005-124240)
[»] scaffold0011 (1 HSPs)
scaffold0011 (313-437)||(127568-127692)
[»] scaffold0219 (1 HSPs)
scaffold0219 (269-457)||(8000-8188)
[»] scaffold2071 (1 HSPs)
scaffold2071 (237-437)||(461-662)
[»] scaffold0034 (1 HSPs)
scaffold0034 (361-457)||(108630-108725)
[»] scaffold0019 (2 HSPs)
scaffold0019 (240-548)||(62914-63221)
scaffold0019 (465-548)||(61877-61960)
[»] scaffold1152 (1 HSPs)
scaffold1152 (406-539)||(2426-2557)
[»] scaffold0201 (1 HSPs)
scaffold0201 (364-538)||(21163-21335)
[»] scaffold0013 (1 HSPs)
scaffold0013 (354-437)||(32705-32790)
[»] scaffold0472 (1 HSPs)
scaffold0472 (502-551)||(787-836)
[»] scaffold0128 (2 HSPs)
scaffold0128 (243-282)||(23047-23086)
scaffold0128 (362-432)||(22120-22190)
[»] scaffold0078 (1 HSPs)
scaffold0078 (465-538)||(18848-18921)


Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-150; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 237 - 551
Target Start/End: Original strand, 16964902 - 16965220
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaa----gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttg 332  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  16964902 tgtgagttgaagatgatgaagatttataaggtagaaagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaatataaaatagacctg 16965001  T
Q  333 tgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
     ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16965002 cgtaatacaatggttctcttttaaaagaaaaaacaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 16965101  T
Q  433 tacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaa 532  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16965102 tacatcatttggggttaaacttaaccatcggaatttatttgataaacggaagaaaatgtaagggactaaaacgtcatttttattaattgtgggaccaaaa 16965201  T
Q  533 tgaaaataagaaattaaat 551  Q
    |||||||||||||||||||    
T  16965202 tgaaaataagaaattaaat 16965220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 335 - 551
Target Start/End: Complemental strand, 15232990 - 15232775
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatata 434  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  15232990 taatccaatggttctcttttaaaaaaaatatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccactatata 15232891  T
Q  435 catcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatg 534  Q
    |||||||| ||||||||||||||  |    |||||||||| |||| || |||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15232890 catcattt-gggttaaacttaacggtcatgatttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatg 15232792  T
Q  535 aaaataagaaattaaat 551  Q
    |||| | ||||||||||    
T  15232791 aaaacatgaaattaaat 15232775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 268 - 551
Target Start/End: Complemental strand, 49801920 - 49801640
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||| ||  | |||||||||||| |||| | || ||||||||    
T  49801920 tagaagatgaagaaaatgaaaaaaatt-agatgttggtggtacatcgtaagataaaatagacctgcatgatccaatggttccctttaacaa-aaaaatca 49801823  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||| ||||||||||||||||||| || |||||||||||||| |||| ||||||  ||| || |||||||||| ||||||| |||| || | | |||    
T  49801822 aacggtttaaattaaaataattaatagaatttatggtggaccacttttaaggttggtttaccgtaaacatcatttgaggttaaaattaa-cagtcggatt 49801724  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||| |||| ||   ||| || |||||  ||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  49801723 tatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgtgggaccaaaatgaaaatataaaattaaat 49801640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 16964663 - 16964805
Alignment:
Q  1 aggtttgataaagaattttttgaatttgttgttgt---tggattaacatcgatgatttattgctggattgttgggatgatgtgttgttcttggtgtattg 97  Q
    ||||||||||||||||||| || ||||||||||||   |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  16964663 aggtttgataaagaattttctggatttgttgttgtcgttggattaacatcgatgatttgttgctggattgttgggatgctgtgttgttcttggtgtattg 16964762  T
Q  98 ttgtgttattcaatgagaaatggagtgtagaagaagagagcag 140  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  16964763 ttgtgttattcaatgagaaatggagtgtagaagaatagagcag 16964805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 273 - 420
Target Start/End: Original strand, 46318435 - 46318582
Alignment:
Q  273 gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacgg 372  Q
    |||||||||||||||||| | |||||||||| ||||||||| ||||||||||||||| ||| ||||| ||||||||| ||  |||| ||| ||||||||     
T  46318435 gatgaagaaaaggaaaaaaagttaggtgttgctggtacatcataagataaaatagacatgtataatctaatggttcttttaaaaaaaaaagatcaaacga 46318534  T
Q  373 ttgaaattaaaataattaataggatctatggtggaccactcttaaagt 420  Q
    || ||||||||||| ||||||||||||||||||||||||||| |||||    
T  46318535 tttaaattaaaatatttaataggatctatggtggaccactctaaaagt 46318582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 362 - 538
Target Start/End: Original strand, 45584913 - 45585089
Alignment:
Q  362 aaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatt 461  Q
    |||||||||| || | |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||  |     
T  45584913 aaatcaaacgatttatattaaaataattaataggatctatggtggagcactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtc 45585012  T
Q  462 ggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     | |||||||||| ||||||| ||||| || | |||| |||| |    |||||||||||||| ||||||||||||||    
T  45585013 aggatttatttggcaaacggaggaaaaagtgaaggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaa 45585089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 15234048 - 15234134
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  15234048 atttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 15234134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 313 - 549
Target Start/End: Original strand, 48096890 - 48097122
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || | |||||||||||||| ||| |  |||| ||| |||||||| || | ||| ||||||||||||||||||||||| |||||||    
T  48096890 cgtaagataaaatacacctatgtaatccaatggtcctcgtaaaaaa-aaagatcaaacgattaatatttaaataattaataggatctatggtagaccact 48096988  T
Q  413 cttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttt 512  Q
    ||||| ||||||||||||||||   |||||| |||||||||||||  | || |||||||||    |||||   |||  ||||||||||||||   | |||    
T  48096989 cttaaggttggtccaccatata---catttgaggttaaacttaacagtagggatttatttgaccgacggagacaaacctaagggactaaaacatgagttt 48097085  T
Q  513 tattaattgtgggaccaaaatgaaaataagaaattaa 549  Q
    ||||| || |||||||||||| |||||  ||||||||    
T  48097086 tattagttatgggaccaaaataaaaattggaaattaa 48097122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 269 - 437
Target Start/End: Complemental strand, 14478570 - 14478401
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| || || ||||| |||||   ||| |||||||| ||||||||    
T  14478570 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacacctgcgtaattcaatgaccctccttttaaaaaaaaaatca 14478471  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||||| |||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||    
T  14478470 aacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat 14478401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 316 - 437
Target Start/End: Complemental strand, 48527790 - 48527669
Alignment:
Q  316 aagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactctt 415  Q
    ||||||||||| |||||  ||||||||||||  || ||||||| ||| ||||||| ||| |||||||||||||| ||| |||||||||||||||||||||    
T  48527790 aagataaaatacacttgcataatccaatggtcatcatttaaaaaaaagatcaaacagtttaaattaaaataattgataagatctatggtggaccactctt 48527691  T
Q  416 aaagttggtccaccatatacat 437  Q
    |||||||||| |||||| ||||    
T  48527690 aaagttggtcgaccatagacat 48527669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 315 - 437
Target Start/End: Original strand, 52078003 - 52078125
Alignment:
Q  315 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactct 414  Q
    |||||||||||| ||||  |||||| |||||| ||| |||  || ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  52078003 taagataaaatacacttacgtaatctaatggtcctcctttttaaaaaaaatcaaacggttaaaattaaaataattaataggatctatggtgtatcactct 52078102  T
Q  415 taaagttggtccaccatatacat 437  Q
    ||| |||||| ||||||| ||||    
T  52078103 taaggttggttcaccatagacat 52078125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 313 - 437
Target Start/End: Original strand, 9226071 - 9226196
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    ||||||||||||||||| || || ||  |||||||||||||||| | |||| |||||||  || ||||||||||||||||||||||||||||||||||||    
T  9226071 cgtaagataaaatagacatgcgtgatttaatggttctcttttaataaaaaagatcaaacaatttaaattaaaataattaataggatctatggtggaccac 9226170  T
Q  412 tcttaaagttggtccaccatatacat 437  Q
    | |||| |||| ||||||||| ||||    
T  9226171 ttttaaggttgatccaccatagacat 9226196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 371 - 549
Target Start/End: Complemental strand, 16964034 - 16963859
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 470  Q
    |||| ||||||| | |||||||| | |||||| ||||||||| |||| ||||||||| |||| ||||   || | |||||| |||||  |  | ||||||    
T  16964034 ggttaaaattaacaaaattaataaggtctatgatggaccacttttaaggttggtccatcataaacat---ttagagttaaagttaacagtcagcatttat 16963938  T
Q  471 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaa 549  Q
    |||| ||||||| |||||  | |||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||    
T  16963937 ttggcaaacggaggaaaagatgagggactaaaacaccatttttattaattgtgggaccaaaatgaaaacatgaaattaa 16963859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 244 - 457
Target Start/End: Complemental strand, 51445918 - 51445707
Alignment:
Q  244 tgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaat 343  Q
    |||||||||||||||    | ||| |||||||||||||| ||| ||  | |||| ||||| ||   || |||||||||||||| || || ||||||||||    
T  51445918 tgaagatgatgaagaagggtgaggaagaagatgaagaaagggagaattaattagttgttgttgactcaccgtaagataaaatacacctgcgtaatccaat 51445819  T
Q  344 ggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttg 443  Q
    |   ||| | |  || ||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||  || |    
T  51445818 gaccctcctgtttaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagttgatccaccatagacat--ttgg 51445721  T
Q  444 gggttaaacttaac 457  Q
    |||||||| |||||    
T  51445720 gggttaaagttaac 51445707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 269 - 457
Target Start/End: Original strand, 5612897 - 5613082
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| | | | ||| |||||| || | || | |||||||||||| ||||  |||||| ||||||  || ||||||||  | |||||    
T  5612897 agaagatgaagaaagggagacataattaagtgttgttgattcaccataagataaaatacacttacgtaatctaatggtcatccttttaaaaatataatca 5612996  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||||| || |||||||||   | |||||||||||||| |||||    
T  5612997 aacggtttaaattaaaataattaataggatctatggtggatcact-ttaaaggtgatccaccata---aacatttggggttaaagttaac 5613082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 311 - 532
Target Start/End: Original strand, 44999315 - 44999535
Alignment:
Q  311 atcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa--tcaaacggttgaaattaaaataattaataggatctatggtggac 408  Q
    ||||||||||| |||||||||| |||||||||||||  |||||| ||| || ||  ||||| |||| || ||||||||||||||| ||||||||||| ||    
T  44999315 atcgtaagatataatagacttgcgtaatccaatggtcatcttttgaaaaaacaagatcaaatggtttaagttaaaataattaataagatctatggtgaac 44999414  T
Q  409 cactcttaaagttggtccaccatatacatcatttggggttaaacttaac-cattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgcc 507  Q
    ||||||||   ||||||||||||| |   |||||  ||||||| |||||   | || |||||||||| |||| || |||||  | | |||| ||||||||    
T  44999415 cactcttacgattggtccaccataga---catttaaggttaaagttaacagctagggatttatttggcaaacagaggaaaaaatga-ggacgaaaacgcc 44999510  T
Q  508 atttttattaattgtgggaccaaaa 532  Q
    | |||||||||||||||||| ||||    
T  44999511 aattttattaattgtgggactaaaa 44999535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 315 - 538
Target Start/End: Original strand, 15072647 - 15072870
Alignment:
Q  315 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa--tcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||||| ||||||||| || ||||  ||||||| | |||||  ||||||  || ||||||| | |||||||||  |||| |||||||||||    
T  15072647 taagataaaatagacctgtgtaatcaaagggttaccttttaataaaaaaagatcaaacaatttaaattaagaaaattaatagagtctacggtggaccact 15072746  T
Q  413 cttaaagttggtccaccatatacatcatttggggttaaacttaac---cattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccat 509  Q
    ||| | |||||||||||||| |   |||||| ||||||| |||||   |||  | |||||||||| ||||||| |||||  |||||||| |||| |        
T  15072747 ctttaggttggtccaccataga---catttgaggttaaagttaacagacat--ggatttatttggcaaacggaggaaaaaataagggaccaaaatgtacg 15072841  T
Q  510 ttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||||||||||||||||||||||    
T  15072842 ttttattaattgtgggaccaaaatgaaaa 15072870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 305 - 548
Target Start/End: Original strand, 35943295 - 35943537
Alignment:
Q  305 tggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacgg-ttgaaattaaaataattaataggatctatgg 403  Q
    |||| |||||||||||||||||||| || ||||| |||||||  || ||| ||| ||| ||||||||| || ||| ||||| | |||||| | |||||||    
T  35943295 tggttcatcgtaagataaaatagacctgcgtaattcaatggtcatcctttcaaaaaaagatcaaacggttttaaaataaaaaatttaataaggtctatgg 35943394  T
Q  404 tggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac--cattggaatttatttggtaaacggaagaaaatgtaagggactaa 501  Q
    |||| ||||||||| |||||||||||||| |   ||||| ||||||||||||||  |   || |||||||||| ||||| | ||||| || | |||| ||    
T  35943395 tggatcactcttaaggttggtccaccataga---catttagggttaaacttaacagccaggggatttatttggcaaacgaaggaaaaagtga-ggaccaa 35943490  T
Q  502 aacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    || |    |||||||||||||||||||||||| |||||  |||||||    
T  35943491 aatgtacgttttattaattgtgggaccaaaataaaaatttgaaatta 35943537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 438
Target Start/End: Original strand, 9485149 - 9485286
Alignment:
Q  295 taggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaatag 394  Q
    |||||||||||||||||||||||||||||||| || || ||||  ||| |||  ||||| ||||  |||||| |    || |||||||||||||||||||    
T  9485149 taggtgttggtggtacatcgtaagataaaataaacatgcgtaactcaaaggtaatctttaaaaa--aaaatcga----tttaaattaaaataattaatag 9485242  T
Q  395 gatctatggtggaccactcttaaagttggtccaccatatacatc 438  Q
    ||| ||||||  |||||||||||||||| ||||||||| |||||    
T  9485243 gatttatggttaaccactcttaaagttgatccaccatagacatc 9485286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 406 - 551
Target Start/End: Original strand, 49802846 - 49802988
Alignment:
Q  406 gaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacg 505  Q
    ||||||| |||| |||||| ||||||| ||||   || | ||| || |||||| | || |||||||||| |||||||  ||||  | |||||||||||||    
T  49802846 gaccacttttaaggttggtacaccatagacat---ttagagttgaagttaaccgtcgggatttatttggcaaacggagaaaaagatgagggactaaaacg 49802942  T
Q  506 ccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
     |||||||||||||||||||||||||||||||| | ||||||||||    
T  49802943 tcatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 49802988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 13147336 - 13147397
Alignment:
Q  376 aaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  13147336 aaattaaaataattaataggatctatggtggaccactattaaggttggtccaccatagacat 13147397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 241 - 437
Target Start/End: Complemental strand, 46467477 - 46467281
Alignment:
Q  241 agttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatcc 340  Q
    ||||||||||||||||||||  ||||||||||||||||||||   | ||| | |||| ||||| |||| || |||||| || |||||||  || |||| |    
T  46467477 agttgaagatgatgaagattagtaaggtagaagatgaagaaagaaagaaagaattagttgttgttggtgcaccgtaagttacaatagacacgtataattc 46467378  T
Q  341 aatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||||  || ||||| || | | ||||||||||| ||||||||| | ||||||  ||||| |||||| |||| |||| |||||||||||||| ||||    
T  46467377 aatggtcatctttttagaaaatatatcaaacggtttaaattaaaa-atttaataacatctacggtggatcacttttaatgttggtccaccatagacat 46467281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 425
Target Start/End: Complemental strand, 13894872 - 13894760
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||| || || ||||| |||||||| | | ||||||| ||| ||||||||||| |||||||||||||||| |||||||||||| ||| |||    
T  13894872 gtaagataaaatacacatgcgtaattcaatggtttttcatttaaaaaaaagatcaaacggtttaaattaaaataattaacaggatctatggtagacaact 13894773  T
Q  413 cttaaagttggtc 425  Q
    ||| | |||||||    
T  13894772 ctttaggttggtc 13894760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 34350288 - 34350228
Alignment:
Q  397 tctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  34350288 tctatggtggaccactcttaaggttgatccaccatagacatcatttggggttaaacttaac 34350228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 313 - 432
Target Start/End: Original strand, 10722233 - 10722352
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || | ||||||| |||||||||| ||| |||  |||||| || |||| ||||||||| ||||| ||| ||||||| |||||||||    
T  10722233 cgtaagataaaataaacctatgtaatctaatggttctcattttaaaataaaatctaaaggtttaaattaaaaaaattagtagaatctatgatggaccact 10722332  T
Q  413 cttaaagttggtccaccata 432  Q
    ||| | ||||||||| ||||    
T  10722333 ctttaggttggtccatcata 10722352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 269 - 457
Target Start/End: Complemental strand, 26286715 - 26286530
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| | | | |||||| ||| || | || |||| ||||||||| ||||  |||||| ||||||  || ||||||||  | |||||    
T  26286715 agaagatgaagaaagggagacataattaggttttgttgattcaccgtacgataaaatacacttacgtaatctaatggtcatccttttaaaaatataatca 26286616  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||| |||||| || |||||||||   | |||||||||||||| |||||    
T  26286615 aacggtttaaattaaaataattaatagagtctatggtggatcact-ttaaaggtgatccaccata---aacatttggggttaaagttaac 26286530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 429
Target Start/End: Complemental strand, 26802178 - 26802083
Alignment:
Q  335 taatccaatggttctcttttaaaagaaa-aatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    ||||| |||||| ||||||||||| ||| |||||||||||| |||||||||| ||||||| ||||||| |||||| |||||||| |||||| ||||    
T  26802178 taatcaaatggtcctcttttaaaaaaaataatcaaacggtttaaattaaaatgattaatatgatctatagtggacaactcttaaggttggttcacc 26802083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 399 - 538
Target Start/End: Complemental strand, 16123460 - 16123323
Alignment:
Q  399 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatt-ggaatttatttggtaaacggaagaaaatgtaaggga 497  Q
    ||||||||| |||| |||||||||||| |||||| ||||   ||| | ||||||||||| |   || |||||||||| |||||||||||||  | |||||    
T  16123460 tatggtggatcacttttaaagttggtctaccatagacat---ttgagattaaacttaacaaccagggatttatttggcaaacggaagaaaaaatgaggga 16123364  T
Q  498 ctaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||||  | ||||||||||||||| |||||||||||||    
T  16123363 ctaaaacgtgaattttattaattgtggaaccaaaatgaaaa 16123323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 3617417 - 3617478
Alignment:
Q  376 aaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||    
T  3617417 aaattaaaataattaataggatctatagtggaccactcttaaggttggttcaccatagacat 3617478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 437
Target Start/End: Original strand, 6049267 - 6049406
Alignment:
Q  299 tgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggat 397  Q
    ||||| |||| ||| |||||||| | ||||| ||  | ||| |||||| ||||||||| | |||| ||||| ||||| |||||||||||||||| |||||    
T  6049267 tgttgttggttcattgtaagatacagtagacatgcatgatctaatggtcctcttttaataaaaaatatcaatcggtttaaattaaaataattaacaggat 6049366  T
Q  398 ctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||| ||||||||||| || |  ||||||||||||| ||||    
T  6049367 ctacggtggaccactatttagattggtccaccatagacat 6049406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 23091679 - 23091569
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaagga-aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 335  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||   | |||| | |||| ||||| |||||||||||||| || |||||||  || |    
T  23091679 tgtgagttgaagatgatgaagattattaaggtagaagatgaagaaagaaataaaagaattagttgttgttggtacatcgtaagttacaatagacacgtat 23091580  T
Q  336 aatccaatggt 346  Q
    ||| |||||||    
T  23091579 aattcaatggt 23091569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 269 - 417
Target Start/End: Original strand, 24517428 - 24517578
Alignment:
Q  269 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatc 366  Q
    ||||||||||||||| | | ||| | |||||||||| |||| || | | ||||| ||||||| ||  ||||| |||||| ||||||| ||| ||| ||||    
T  24517428 agaagatgaagaaaatgtacaaaaaattaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctctttttaaaaaaataatc 24517527  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaa 417  Q
    |||||||| |||| ||||| ||||||| ||||||| |||||| ||||||||    
T  24517528 aaacggtttaaataaaaatgattaatatgatctatagtggacaactcttaa 24517578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 40109638 - 40109509
Alignment:
Q  294 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa--atcaaacggttgaaattaaaataattaa 391  Q
    |||||||||| |||| || | | ||||| ||||||| ||  ||||| |||||| ||||||| ||| ||||  ||||||||||| |||| ||||| |||||    
T  40109638 ttaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctctttttaaaaaaaataatcaaacggtttaaataaaaatgattaa 40109539  T
Q  392 taggatctatggtggaccactcttaaagtt 421  Q
    || ||||||| |||||| ||||||||||||    
T  40109538 tatgatctatagtggacaactcttaaagtt 40109509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 318 - 410
Target Start/End: Original strand, 7306116 - 7306209
Alignment:
Q  318 gataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    |||||||||||  ||||||||| | |||| ||||||||||| ||| ||||||| || | ||||||||| |||||||| ||||||||||||||||    
T  7306116 gataaaatagaaatgtgtaatcaattggtcctcttttaaaaaaaacaatcaaatggctaaaattaaaagaattaataagatctatggtggacca 7306209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 15746675 - 15746747
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||||| |||| ||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||| ||||    
T  15746675 atcaaagggttaaaattaaaaga-ttaataggatctatggtggaccactcttaagattggtccaccatagacat 15746747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 24499662 - 24499735
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||||||||||| ||||| || |||||| ||||||  | |||||||||||||| ||||||||||||||    
T  24499662 atttatttggtaaacggaggaaaaagtgagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaa 24499735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 313 - 425
Target Start/End: Complemental strand, 10712047 - 10711935
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || | ||||||| |||||||||| ||| |||  |||||| || |||| ||||||||| ||||| ||| || |||| |||||||||    
T  10712047 cgtaagataaaataaacctatgtaatctaatggttctcattttaaaataaaatctaaaggtttaaattaaaaaaattagtagaatttatgatggaccact 10711948  T
Q  413 cttaaagttggtc 425  Q
    ||| | |||||||    
T  10711947 ctttaggttggtc 10711935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 18821632 - 18821720
Alignment:
Q  350 cttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||||||| |||| ||||||||||| || || ||| |||||||||||||| |||| |||||||||||| ||| |||||||||| ||||    
T  18821632 cttttaaaacaaaagatcaaacggttaaattttaaaaaattaataggatctttggtagaccactcttaaggttagtccaccatagacat 18821720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 313 - 432
Target Start/End: Complemental strand, 46110543 - 46110421
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctct---tttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacc 409  Q
    ||||||||| ||||||||||| | ||| || ||| | ||   ||||||| ||| ||||||||||| ||||||| | |||||||| | |||| | ||||||    
T  46110543 cgtaagatataatagacttgtatgatctaacggtccactttctttaaaaaaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggacc 46110444  T
Q  410 actcttaaagttggtccaccata 432  Q
    |||||||| ||||||||||||||    
T  46110443 actcttaaggttggtccaccata 46110421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 381 - 428
Target Start/End: Complemental strand, 9482646 - 9482599
Alignment:
Q  381 aaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  9482646 aaaataattaataagatctatggtgaaccactcttaaagttggtccac 9482599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 364 - 457
Target Start/End: Original strand, 41873879 - 41873969
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||||||| ||||| ||| |||||||    ||||||||||||||||||||| |||||||||||||| |   |||||| |||||||||||||    
T  41873879 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccaccataga---catttgtggttaaacttaac 41873969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 335 - 548
Target Start/End: Original strand, 50444577 - 50444788
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatat 433  Q
    |||||||||| |  |||||||||| |||| ||||||||||| |||| || | |||||||| | |||| | ||||| |||||||| ||||||||| ||||     
T  50444577 taatccaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaacatag 50444675  T
Q  434 acatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaat 533  Q
    || |  ||||| |||||| |||||  || | |||||||||| || |||| |||||  | |||||| |||| |    |||||||||||||||||| |||||    
T  50444676 acgt--tttggagttaaagttaacggtttggatttatttggcaatcggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaat 50444773  T
Q  534 gaaaataagaaatta 548  Q
    ||||||  |||||||    
T  50444774 gaaaatttgaaatta 50444788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 399 - 538
Target Start/End: Complemental strand, 14471029 - 14470892
Alignment:
Q  399 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac-cattggaatttatttggtaaacggaagaaaatgtaaggga 497  Q
    ||||||||||||||||||| |||||||||| ||| || |   ||||||||||||||||| |    | |||||||||| ||||| | ||||| || |||||    
T  14471029 tatggtggaccactcttaaggttggtccactatagacgt---ttggggttaaacttaacaccgaaggatttatttggcaaacgaaggaaaaagtgaggga 14470933  T
Q  498 ctaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    || || ||    |||||||||||||||||||||||||||||    
T  14470932 cttaaccgtacgttttattaattgtgggaccaaaatgaaaa 14470892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 463 - 549
Target Start/End: Original strand, 51042348 - 51042433
Alignment:
Q  463 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaa 549  Q
    |||||||||||| ||||||| |||||    |||||||||||||  | ||||||||||||||||||||||||||||||  ||||||||    
T  51042348 gaatttatttggcaaacgga-gaaaaaaagagggactaaaacgtgagttttattaattgtgggaccaaaatgaaaattggaaattaa 51042433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 417
Target Start/End: Complemental strand, 12665998 - 12665945
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaa 417  Q
    ||||||||||| ||||||| | |||||||| |||||||||||||||||||||||    
T  12665998 atcaaacggtttaaattaacaaaattaataagatctatggtggaccactcttaa 12665945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 314 - 410
Target Start/End: Complemental strand, 27556527 - 27556431
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||  |  ||||||||| ||| | ||||||||  ||| ||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  27556527 gtaagataaaatagacacgcttaatccaatagttattcttttaaattaaagatcaaactgtttaaattaaaa-aattaataggatctatggtggacca 27556431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 439 - 538
Target Start/End: Original strand, 52628854 - 52628953
Alignment:
Q  439 atttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||||||||||||  |||  |||||||||| ||||||| |||||  | |||||| |||| |    |||||||||||||||||||||||| ||||    
T  52628854 atttggggttaaacttaacggttgagatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaattaaaa 52628953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 370
Target Start/End: Original strand, 42245778 - 42245872
Alignment:
Q  273 gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaac 370  Q
    ||||||||||||| |||| | |||| |||||||||||||| |||| ||||||||||||  |||||| ||||||| ||| ||||| | ||| |||||||    
T  42245778 gatgaagaaaagggaaaaaaattagatgttggtggtacat-gtaaaataaaatagact--tgtaattcaatggtcctcctttaacaaaaagatcaaac 42245872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 27814504 - 27814427
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||||| |||||||| ||||||| | |||||||| | | || | ||||||||| ||||||||||||||||||| ||||    
T  27814504 aaaaatgaaacggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccatagacat 27814427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 355 - 432
Target Start/End: Original strand, 46111395 - 46111472
Alignment:
Q  355 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||| ||||||||||| ||| | ||||| | |||||||| |||||||  ||||||||| ||||||||| |||||||||    
T  46111395 aaaaaaaaaatcaaacagttaagattaacacaattaataagatctatcatggaccacttttaaagttgatccaccata 46111472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 23091527 - 23091487
Alignment:
Q  397 tctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  23091527 tctatggtggaccacttttaaagttggtccaccatagacat 23091487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 364 - 428
Target Start/End: Complemental strand, 28050529 - 28050465
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    ||||||||||| || |||| | ||| |||||||||||||||||| |||||||||  |||||||||    
T  28050529 atcaaacggttaaagttaagaaaatcaataggatctatggtggaacactcttaagattggtccac 28050465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 538
Target Start/End: Complemental strand, 41872780 - 41872612
Alignment:
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac--cattggaa 465  Q
    ||||||| ||||||||| | |||||| | ||||||||| || | ||||||  ||||| ||||||| ||||  || |||||||||||||||  || ||  |    
T  41872780 aacggtttaaattaaaaaatttaataaggtctatggtgaactaatcttaagattggttcaccatagacat--ttgggggttaaacttaacaccaatg--a 41872685  T
Q  466 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||||| ||||||| ||||| || || |||| |||||    |||||||||||||  || |||||||||||    
T  41872684 tttatttggcaaacggaggaaaaagtgagagacttaaacgtacgttttattaattgtatgatcaaaatgaaaa 41872612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 411
Target Start/End: Complemental strand, 51299584 - 51299441
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| || |||| ||||| ||||||||| | ||  |||||||| |||||||  |  | |||||||| ||||| |||||||  ||| ||||    
T  51299584 agaagatgaagaaaggggaaaaaatttaagtgttggtgattcactgtaagatacaatagaccagcatgatccaatgattctcattttaaataaaagatca 51299485  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    || |||| |||||||||   || ||| | |||||||||||||||    
T  51299484 aagggtttaaattaaaaagttttataaggtctatggtggaccac 51299441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 15071451 - 15071378
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||||||||||| ||||| || |||||| |||||     ||||||||||| || ||||||||||||||    
T  15071451 atttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaa 15071378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 16123632 - 16123587
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaa 282  Q
    |||||||||||||||||||||||   |||||||||||| |||||||    
T  16123632 tgtgagttgaagatgatgaagatcggtaaggtagaagacgaagaaa 16123587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 51300168 - 51300233
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    |||||| |||| ||||| | | |||||||| | |||||||||||||||| |||| |||||||||||    
T  51300168 atcaaatggttaaaattcataaaattaataaggtctatggtggaccacttttaatgttggtccacc 51300233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 509 - 538
Target Start/End: Complemental strand, 52627580 - 52627551
Alignment:
Q  509 tttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||||||||||||||||||||||||||    
T  52627580 tttttattaattgtgggaccaaaatgaaaa 52627551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 268 - 551
Target Start/End: Original strand, 10731940 - 10732222
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| | ||||||||||||| ||| || ||||||||||||||||||  ||||||||||||||| | |||||||||||||||    
T  10731940 tagaagatgaagaaaaggaaaaaaaattaggtgttggtgatacttcttaagataaaatagacttgcctaatccaatggttctttgttaaaagaaaaatca 10732039  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||||| ||||||||| ||||||||||||||| | ||||||    
T  10732040 aacggtcgaaattaaaataattaataggatctatggtggaccgctctaaaggttggtccaccatagacatcattt-gggttaaacttaaccgtcggaatt 10732138  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||    
T  10732139 tatttggtaaacggaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatgaaaacaataaattaaat 10732222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 236 - 551
Target Start/End: Original strand, 53614053 - 53614366
Alignment:
Q  236 gtgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 335  Q
    |||||||||||||||||||||||||  ||| | |||||||||||||| ||||||  ||| |||||||||| ||||||| |||| |||||||  | ||| |    
T  53614053 gtgtgagttgaagatgatgaagattattaaaggagaagatgaagaaagggaaaataatt-aggtgttggtagtacatcataagctaaaataagcatgtct 53614151  T
Q  336 aatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatac 435  Q
    |||| |||||||||||||| ||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | || ||||||||| ||    
T  53614152 aatctaatggttctctttttaaaaaataatctaacggttgaaattaaaataattactaggatctatggtggaccactcttaaggatgatccaccatagac 53614251  T
Q  436 atcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatga 535  Q
    || |||||||||||||||||||   ||| |||||||||| |||  || |||||||| |||||||||||||||| |||||||||||||||||||||||| |    
T  53614252 attatttggggttaaacttaacgcctgg-atttatttggcaaatagaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaataa 53614350  T
Q  536 aaataagaaattaaat 551  Q
    ||| ||||||||||||    
T  53614351 aaacaagaaattaaat 53614366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 268 - 551
Target Start/End: Complemental strand, 35371212 - 35370936
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt-aaaagaaaaatc 366  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| |||||||    
T  35371212 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacttgcctaatccaatggttctctttttaaaaaaaaaatc 35371114  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 466  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||||       |    
T  35371113 aaaaagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcattt-gggctaaacttaacc------gt 35371021  T
Q  467 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
     ||||||  |||| || ||||| || | |||||||||| ||||||||||||||||||||| ||||||||||| | ||||||||||    
T  35371020 ctatttgacaaacagaggaaaaggtgaaggactaaaacaccatttttattaattgtgggatcaaaatgaaaacatgaaattaaat 35370936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 268 - 551
Target Start/End: Complemental strand, 26886576 - 26886295
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||    
T  26886576 tagaagatgaagaaaatgaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacatgcataatccaatggttcccttttaaaaaaaaaatca 26886478  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| |||| || |||||||||| |||| || |||| || | | |||    
T  26886477 aacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcaccgtaaacatcatttgaggttgaaattaa-cagtcggatt 26886379  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||| |||| ||   ||| || |||||  ||||| |||||||||||||||||  |||||||||||||||| ||||||||||    
T  26886378 tatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgttagaccaaaatgaaaatatgaaattaaat 26886295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 270 - 551
Target Start/End: Original strand, 41264468 - 41264746
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 369  Q
    ||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||| ||||||||||    
T  41264468 gaagatgaagaaaagaaaaaaa--ttaggtgttggtggtacatcgtaagataaaatagacctgcttaattcaatggttctctttttaaaaaaaaatcaaa 41264565  T
Q  370 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattta 469  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||    |||||||||||  |||  |||||    
T  41264566 cggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatgatccaccataaacatcattt-ttattaaacttaacggttgagattta 41264664  T
Q  470 tttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||| |||||||  |||| || |||||  ||||||||||||||||||| |||| |||||||||||||| | ||||||||||    
T  41264665 tttggcaaacggagaaaaaggtgagggatcaaaacgccatttttattaaatgtgagaccaaaatgaaaacatgaaattaaat 41264746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 268 - 531
Target Start/End: Original strand, 27841518 - 27841783
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaaga--aaaa 364  Q
    |||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||        ||||    
T  27841518 tagaagatgaagaaaaagaaaaaaaaattaggtgttggtggtacatcgtaagataaaatagacttgcctaatccaatagttctcttttttttttttaaaa 27841617  T
Q  365 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgga 464  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||  | |||||||||||||| |||    
T  27841618 tcaaacagttaaaattaaaataattattaggatctatggtggaccactcttaaggttggtccaccataaacataattt-agattaaacttaaccatcgga 27841716  T
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaa 531  Q
    |||||||||  ||||| ||||||| || | ||||||||| || ||||||||||||||||||||||||    
T  27841717 atttatttgacaaacgaaagaaaaggtgaaggactaaaaagctatttttattaattgtgggaccaaa 27841783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 270 - 538
Target Start/End: Complemental strand, 3208788 - 3208520
Alignment:
Q  270 gaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaaga-aaaatca 367  Q
    ||||||||||||||||||||| |  |||||||||| ||||||||||||||||||| ||||||||  || |||||||||||| |||| ||| | |||||||    
T  3208788 gaagatgaagaaaaggaaaaaaaaattaggtgttgatggtacatcgtaagataaattagacttgccta-tccaatggttctatttttaaaaataaaatca 3208690  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||  |  | |||    
T  3208689 aacggtttaaattataataattaataggatttatggtggaccactcttaaggttggtccaccata-atatcatttggggttaaacttaacggtaaggatt 3208591  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||  ||||||| |||||  |||||||  ||||||    ||||||||||| |||||||||||||||||    
T  3208590 tatttgacaaacggaggaaaaaataagggatcaaaacgtacgttttattaattatgggaccaaaatgaaaa 3208520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 267 - 457
Target Start/End: Original strand, 34819094 - 34819285
Alignment:
Q  267 gtagaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaat 365  Q
    |||||||||||||||||| ||||| |  |||||||||||||||||| | ||||||||||||||||||  ||||||||||||||| |||| | | |||||     
T  34819094 gtagaagatgaagaaaagaaaaaaaaaattaggtgttggtggtacaccataagataaaatagacttgcctaatccaatggttctttttttataaaaaaaa 34819193  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||    
T  34819194 caaacagtttaaattaaaataagtaataggatctatggtggaccactcttaaggttgatccactatagacatcatttggggttaaacttaac 34819285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 314 - 536
Target Start/End: Complemental strand, 53622910 - 53622700
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactc 413  Q
    |||||||||||||||| || |||||||||| || ||| ||||||| || |||||||||||| ||||||||| |||||||||            |||||||    
T  53622910 gtaagataaaatagacatgcgtaatccaatcgtactcctttaaaataagaatcaaacggtttaaattaaaacaattaatag------------accactc 53622823  T
Q  414 ttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccattttt 513  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||| |||||||  ||||     |||||    
T  53622822 ttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaatctaagggatcaaaatatatttttt 53622723  T
Q  514 attaattgtgggaccaaaatgaa 536  Q
    |||||||||| ||||||||||||    
T  53622722 attaattgtgcgaccaaaatgaa 53622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 360 - 538
Target Start/End: Original strand, 38242419 - 38242596
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaacca 459  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||| | ||||||||||||      
T  38242419 aaaaatcaaacggtttaaattaaaataattaatagaatttatggtggaccactcttaaggttggtccaccatagacatcattt-gagttaaacttaactg 38242517  T
Q  460 ttggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |  | |||||||||| |||| ||  |||| || |||||| |||| |    ||||||||||||||||| |||||||||||    
T  38242518 tgaggatttatttggcaaacagataaaaaagtgagggaccaaaaggtacgttttattaattgtgggatcaaaatgaaaa 38242596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 237 - 548
Target Start/End: Complemental strand, 53420655 - 53420342
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaagga-aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 335  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||   | |||| | |||| ||||| |||||||||||||| || |||||||  || |    
T  53420655 tgtgagttgaagatgatgaagattattaaggtagaagatgaagaaagaaataaaagaattagttgttgttggtacatcgtaagttacaatagacacgtat 53420556  T
Q  336 aatccaatggt--tctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatat 433  Q
    |||  ||||||  | | |||||| | | | ||||||| ||| |||||||||   |||||| | ||||||||||| |||| |||||||||||||||||||     
T  53420555 aatttaatggtcattttttttaagaaacagatcaaacagtttaaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatag 53420456  T
Q  434 acatcatttggggttaaactta--accattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaa 531  Q
    |   |||||| |||||||||||  |   | || ||||||||| ||||||||  |||| || |||||| ||||||    ||||||||||||| ||||||||    
T  53420455 a---catttgtggttaaacttaatagactagggatttatttgataaacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaa 53420359  T
Q  532 atgaaaataagaaatta 548  Q
    ||||||||| |||||||    
T  53420358 atgaaaatatgaaatta 53420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 269 - 427
Target Start/End: Complemental strand, 46369110 - 46368953
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    ||||||||| |||||| ||||| | ||| |||||||||||||||||||||||||||||||  | ||||||| ||||||||||| |||||| || ||| ||    
T  46369110 agaagatgatgaaaagaaaaaaaagttacgtgttggtggtacatcgtaagataaaatagatatttgtaatctaatggttctctcttaaaa-aataataaa 46369012  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtcca 427  Q
    | | || |||||||||||||||||| ||| ||||||||| ||||||| |||||| ||||    
T  46369011 atgatttaaattaaaataattaatatgatatatggtggaacactctttaagttgatcca 46368953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 27838029 - 27837943
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  27838029 atttatttggcaaacggaggaaaaggtgagggactaaaacgccatatttattaattgtgggaccaaaatgaaaacatgaaattaaat 27837943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 53612980 - 53612894
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| |||| || |||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  53612980 atttatttggcaaacagaggaaaatgtgagggaataaaacgccatttttattaattatgggaccaaaatgaaaacaagaaattaaat 53612894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 304 - 538
Target Start/End: Original strand, 53624210 - 53624441
Alignment:
Q  304 gtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatg 402  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||| | ||| ||| |||||| |||| ||||| ||| |||||||| | ||||||    
T  53624210 gtggtacatcgtaagataaaatagacacgtgtaatccaacggttctctttcttaaaaaaagatcaaaaggttaaaattgaaa-aattaataaggtctatg 53624308  T
Q  403 gtggaccactct-taaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaa 501  Q
    |||||| | ||| ||| ||||||||||||||||   ||||||||||||||| ||||| |  | |||||||||| |||| ||  |||| || || ||| ||    
T  53624309 gtggacta-tctataatgttggtccaccatata---catttggggttaaacctaaccgtctggatttatttggcaaaccgagaaaaaagtgagtgaccaa 53624404  T
Q  502 aacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    || |    |||||||||||||| || |||||||||||    
T  53624405 aatgtacgttttattaattgtgagatcaaaatgaaaa 53624441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 269 - 457
Target Start/End: Complemental strand, 49380005 - 49379819
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| |  || |||||||||||   ||| ||| ||| ||| |||||    
T  49380005 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacatctgcgtaatccaatgaccctccttttaaaaaaatatcaa 49379906  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    || ||| |||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||  || ||||||||| |||||    
T  49379905 acagtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat--ttgggggttaaagttaac 49379819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 269 - 437
Target Start/End: Complemental strand, 13621223 - 13621055
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| |  || |||||||||||   ||| ||| ||| |||||| ||    
T  13621223 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacatctgcgtaatccaatgaccctccttttaaaaaaaaattaa 13621124  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||||| |||||| |||||||||||||||||||||||||||| | || |||| ||||||||||| ||||    
T  13621123 acggtttaaattagaataattaataggatctatggtggaccattttttaagtcggtccaccatagacat 13621055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 432
Target Start/End: Complemental strand, 10301151 - 10301074
Alignment:
Q  355 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  10301151 aaaaaaaaaatcaaacagtttaaattaaaataattaataggatctatggtggatcactcttaaggttggttcaccata 10301074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 424
Target Start/End: Complemental strand, 10338955 - 10338886
Alignment:
Q  355 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggt 424  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10338955 aaaaaaaaaatcaaacagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggt 10338886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 465 - 550
Target Start/End: Original strand, 35372165 - 35372250
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaa 550  Q
    |||||||||| |||| || ||||| || ||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  35372165 atttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaattaaa 35372250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 351 - 430
Target Start/End: Original strand, 14745095 - 14745174
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 430  Q
    |||||||| | | ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  14745095 ttttaaaatatagatcaaacagtttaaattaaaataattaataggatctatggtgaaccactcttaaggttggtccacca 14745174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 3455526 - 3455600
Alignment:
Q  357 aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| |||||| |||||| |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  3455526 aagaaagatcaaagggttgagattaaa-taattaatatgatctatggtggaccactcttaaggttggtccaccata 3455600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 351 - 538
Target Start/End: Complemental strand, 42685097 - 42684912
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaa 450  Q
    |||||||| | | ||||||||||| ||||||||| | |||||| | | |||||||||||||||||||  ||||| ||||||| |   |||||||||||||    
T  42685097 ttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccataga---catttggggttaa 42685001  T
Q  451 acttaaccat-tggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||  |   | |||||||||||||||  |  ||||  | ||||||||||||| || ||||||| ||| ||| |||||||||||||    
T  42685000 acttaacagtcaaggatttatttggtaaacatagaaaaaaatgagggactaaaacgtcagttttattcattatggaaccaaaatgaaaa 42684912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 376 - 547
Target Start/End: Complemental strand, 10731080 - 10730912
Alignment:
Q  376 aaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggt 475  Q
    ||||||| | |||||||| | | |||| | ||||||| |||| |||||| ||||||| ||||   |||  |||||| |||||  | || ||||||||||     
T  10731080 aaattaacaaaattaataaggtatatgatagaccacttttaaggttggttcaccatagacat---ttgaagttaaagttaacagtcgggatttatttggc 10730984  T
Q  476 aaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatt 547  Q
    |||||||  |||| || | |||| |||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  10730983 aaacggagaaaaaagtgaaggaccaaaatgccatttttattaattatgggaccaaaatgaaaacaagaaatt 10730912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 364 - 457
Target Start/End: Original strand, 12107887 - 12107979
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||||||| | ||||||| ||  |||||| |||||||||||||||| |||| |||||||||||||| | |||||||||||||||| |||||    
T  12107887 atcaaacggtttatattaaaaaaaa-aatagggtctatggtggaccacttttaaggttggtccaccataaatatcatttggggttaaatttaac 12107979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 18458664 - 18458737
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| ||||| || |||||||||||||| | |||||||||||||||||||||||| ||||    
T  18458664 atttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaaa 18458737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 446 - 551
Target Start/End: Original strand, 26887543 - 26887648
Alignment:
Q  446 gttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaa 545  Q
    |||||| |||||| |  |||||||||||| |||| || |||||  | ||||||||||  ||||||||||||||||||||||| |||||||||| | ||||    
T  26887543 gttaaagttaaccgtcagaatttatttgggaaacagaggaaaagatgagggactaaattgccatttttattaattgtgggacaaaaatgaaaacatgaaa 26887642  T
Q  546 ttaaat 551  Q
    ||||||    
T  26887643 ttaaat 26887648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 317 - 410
Target Start/End: Complemental strand, 37415252 - 37415157
Alignment:
Q  317 agataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa--atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    |||||||||| || |||||||| ||||||| ||||||||||| ||||  ||  ||||||| ||||||||| |||||||| ||||||||||||||||    
T  37415252 agataaaataaacatgtgtaattcaatggtcctcttttaaaaaaaaacaatttaacggttaaaattaaaagaattaataagatctatggtggacca 37415157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 371 - 437
Target Start/End: Complemental strand, 48083428 - 48083362
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| ||| || ||||||| ||||    
T  48083428 ggtttaaattaaaataattaataggatctatggtagaccactcttaaggttagtgcaccatagacat 48083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 410
Target Start/End: Original strand, 44602901 - 44602997
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||  | |||||||||| ||| || ||| ||| |||| ||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  44602901 gtaagataaaatagacacgcgtaatccaatagttatccttttaaataaaagatcaaacggtttaaattaaaa-aattaataggatctatggtagacca 44602997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 50809652 - 50809563
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || |||||||||||||||||||||||||    
T  50809652 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcttttaaaa 50809563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 50866210 - 50866299
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || |||||||||||||||||||||||||    
T  50866210 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcttttaaaa 50866299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 269 - 417
Target Start/End: Original strand, 53194425 - 53194573
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||||||  | ||| |||||  |||| |||||||||||| |||| || || || ||| || | |  || ||| ||| ||| |||||    
T  53194425 agaagatgaagaaagggaaaaggaattaagtgttcatggttcatcgtaagatagaatacacatgcgtgatctaacgatcttcattttaaaaaaagatcaa 53194524  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaa 417  Q
    |||||| ||| ||||||||||||||| |||||||||||| |||| ||||    
T  53194525 acggtttaaaataaaataattaatagaatctatggtggatcacttttaa 53194573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 314 - 458
Target Start/End: Original strand, 21074137 - 21074280
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||||| || || || |||||||  ||||| | ||| ||| |||||| |||| ||||| ||| |||||||| | |||||||||||| | |    
T  21074137 gtaagataaaatagacatgcgtgattcaatggtcatctttcttaaaaaaatatcaaagggttaaaattgaaaaaattaataaggtctatggtggacta-t 21074235  T
Q  413 ct-taaagttggtccaccatatacatcatttggggttaaacttaacc 458  Q
    || ||| |||||||||||||||||||  || ||||||||||||||||    
T  21074236 ctataatgttggtccaccatatacat--ttgggggttaaacttaacc 21074280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 313 - 418
Target Start/End: Original strand, 24487176 - 24487280
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||||||  ||  ||||| |||||| ||| ||||||| ||| |||| ||  || ||||||||| ||||||||||||||||||| ||||| |    
T  24487176 cgtaagataaaatagatctgcttaatcaaatggtcctcctttaaaaaaaagatcatacaatttaaattaaaa-aattaataggatctatggttgaccaat 24487274  T
Q  413 cttaaa 418  Q
    ||||||    
T  24487275 cttaaa 24487280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 50809530 - 50809457
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| |||||||||||||||||    
T  50809530 atttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50809457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 50866332 - 50866405
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| |||||||||||||||||    
T  50866332 atttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50866405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 551
Target Start/End: Complemental strand, 41263717 - 41263661
Alignment:
Q  495 ggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||| |||| |||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  41263717 ggaccaaaatgccatttttaataaatgtgggaccaaaatgaaaatatgaaattaaat 41263661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 371 - 548
Target Start/End: Complemental strand, 38241105 - 38240932
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 470  Q
    |||| ||||||| | |||||||| | |||| | ||||||| | |||| |||||| ||||||| ||||   |||| ||||||||||||    || ||||||    
T  38241105 ggttaaaattaacaaaattaataagctctacgatggaccatttttaa-gttggttcaccatagacat---ttggagttaaacttaacagccgggatttat 38241010  T
Q  471 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||| ||||||| |||||| | | ||||| |||||    |||||||||||||||||||||||| |||||  |||||||    
T  38241009 ttggcaaacggaggaaaatctgaaggacttaaacgtacgttttattaattgtgggaccaaaataaaaatttgaaatta 38240932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 315 - 406
Target Start/End: Original strand, 54110143 - 54110233
Alignment:
Q  315 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtgg 406  Q
    ||||||||||||||| |    |||||||||||  || ||| ||| |||||||||||| || ||||||||| |||||||||||||||||||||    
T  54110143 taagataaaatagacctacaaaatccaatggtcatcgttttaaaaaaaaatcaaacgatttaaattaaaa-aattaataggatctatggtgg 54110233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 466 - 548
Target Start/End: Original strand, 37736089 - 37736171
Alignment:
Q  466 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||||| |||||||  |||| || |||||||||||||    |||||||||||||| |||||||||||||| | |||||||    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaattgtgagaccaaaatgaaaacatgaaatta 37736171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 11224776 - 11224817
Alignment:
Q  390 aataggatctatggtggaccactcttaaagttggtccaccat 431  Q
    |||| ||||||||||||||||||||||| |||||||||||||    
T  11224776 aatatgatctatggtggaccactcttaaggttggtccaccat 11224817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 50810719 - 50810808
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || ||||||||||||| ||| |||||||    
T  50810719 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggtcctcctttaaaa 50810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 50810841 - 50810914
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| |||||  | |||||||||||||    ||||||||||| |||||||||||||||||    
T  50810841 atttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50810914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 50865023 - 50864950
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| |||||  | |||||||||||||    ||||||||||| |||||||||||||||||    
T  50865023 atttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 50865145 - 50865056
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || ||||||||||||| ||| |||||||    
T  50865145 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggtcctcctttaaaa 50865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 11219664 - 11219588
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    |||| ||| ||| ||||||||||  |||||||||| |||| ||||||||| | |||||| ||||||||||| |||||    
T  11219664 taattcaacggtcctcttttaaagaaaaaatcaaatggttaaaattaaaaaatttaatacgatctatggtgaaccac 11219588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 43174593 - 43174679
Alignment:
Q  271 aagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||| |||||||| |  |||||||||||| |||||| || ||||||||||||| || | ||||||||||| |||||||||||    
T  43174593 aagatgaagaagaggaaaaaaaagttaggtgttggtagtacat-gttagataaaatagacatgag-aatccaatggtcctcttttaaaa 43174679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 7270546 - 7270467
Alignment:
Q  350 cttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    ||||||||| |||| ||||||| ||| || | |||| | |||||| |||||||||| |||||||||||| ||||||||||    
T  7270546 cttttaaaacaaaagatcaaacagttaaagtcaaaaaagttaataagatctatggtagaccactcttaaggttggtccac 7270467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 548
Target Start/End: Complemental strand, 18197256 - 18197173
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||| ||||||| |||||  | |||||| |||| |    ||||||||||||||||||||||||||||||  |||||||    
T  18197256 atttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaatta 18197173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 28909498 - 28909561
Alignment:
Q  348 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||| | |||| ||||| | ||| ||||||||| |||||||||||||||||||||||||    
T  28909498 ctcttttaataaaaaagatcaaccagtttaaattaaaaaaattaataggatctatggtggacca 28909561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 549
Target Start/End: Original strand, 36176559 - 36176598
Alignment:
Q  510 ttttattaattgtgggaccaaaatgaaaataagaaattaa 549  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  36176559 ttttattaattgtgggaccaaaatgaaaacatgaaattaa 36176598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 498
Target Start/End: Complemental strand, 53187693 - 53187634
Alignment:
Q  439 atttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggac 498  Q
    |||||||||||||||||||  | || |||||||||| ||||||||||||| || ||||||    
T  53187693 atttggggttaaacttaacggtagggatttatttggcaaacggaagaaaaagtgagggac 53187634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 539
Target Start/End: Original strand, 3209983 - 3210012
Alignment:
Q  510 ttttattaattgtgggaccaaaatgaaaat 539  Q
    ||||||||||||||||||||||||||||||    
T  3209983 ttttattaattgtgggaccaaaatgaaaat 3210012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-102; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 562 - 806
Target Start/End: Complemental strand, 30404013 - 30403771
Alignment:
Q  562 ttttagaaaatagttatgtgcacctggaatacttgtaaagaacaagatattgattataacgtacaaattgtagagtttttgtctaactcgtaatatattt 661  Q
    ||||| ||||||||||| ||||||| |||| |||||||||||||| | ||||||||||||  |||||||||||||| |||||||||||| ||||||||||    
T  30404013 ttttataaaatagttatatgcacctagaattcttgtaaagaacaaaacattgattataac--acaaattgtagagtgtttgtctaactcataatatattt 30403916  T
Q  662 aaacgtctgttagaatatcaacatcagaaatacaacatgcacaagcacccttttgtcaggcacaatcatctgcaatatgccaaaattatattttggggga 761  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30403915 aaacatctgttagaatatcaacatctgaaatacaacatgcacaagcacccttttgtcaggcacaatcatctgcaatattccaaaattatattttggggga 30403816  T
Q  762 aacaatgtgatggccttcaaagaaagtaaccaaaagataaccctc 806  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30403815 aacaatgtgatggccttcaaagaaagtaaccaaaagataaccctc 30403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 268 - 538
Target Start/End: Original strand, 32695087 - 32695355
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  32695087 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtatatcgtaagataaaatagacttgtctaatccaatggttctcttttaaaa-aaaaatca 32695184  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||| ||||||||||||||||||||||||  |  | | |    
T  32695185 aacggtttaaattaaaataattaataggatctatggtggaccaatcttaagattggttcaccatagacatcatttggggttaaacttaacggtcaggact 32695284  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     |||||| |||| || ||||| || | ||||| |||||    |||||||||||||| ||||||||||||||    
T  32695285 aatttggcaaacagaggaaaacgtgaaggacttaaacgtacgttttattaattgtgagaccaaaatgaaaa 32695355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 335 - 551
Target Start/End: Original strand, 13117511 - 13117726
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatata 434  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  13117511 taatccaatggttctcttttaaaaaaaacatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccactatata 13117610  T
Q  435 catcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatg 534  Q
     ||||||| ||||||||||| |   | || |||||||||| |||| || |||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  13117611 gatcattt-gggttaaacttgatggtcgggatttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatg 13117709  T
Q  535 aaaataagaaattaaat 551  Q
    |||| | ||||||||||    
T  13117710 aaaacatgaaattaaat 13117726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 272 - 437
Target Start/End: Original strand, 24192478 - 24192644
Alignment:
Q  272 agatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaaaatcaaac 370  Q
    ||||||||||||| ||||| | ||||||||||||| |||||| ||| ||||||||||| || |||||| |||||||||||||||| || |||||||||||    
T  24192478 agatgaagaaaagtaaaaaaaattaggtgttggtgatacatcctaaaataaaatagacatgcgtaatctaatggttctcttttaagaaaaaaaatcaaac 24192577  T
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  24192578 ggttttaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccatagacat 24192644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 360 - 551
Target Start/End: Complemental strand, 42098776 - 42098586
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaacca 459  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||| |||| ||    
T  42098776 aaaaatcaaacggttgaaattaaagtaattaataggatctatggtggaccacttttaaggttggtccaccaaagacatcatttggggttaaaattaa-ca 42098678  T
Q  460 ttggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
     | | |||||||||| |||||||   ||| ||  ||||  ||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  42098677 gtcggatttatttggcaaacggagacaaacgtgggggatcaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaat 42098586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 270 - 538
Target Start/End: Original strand, 32798344 - 32798612
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaa 368  Q
    |||||||||||||| |||||| | ||| ||| || |||| || |||||||||||||| || |  | ||||||  ||| ||| ||| |||||||| |||||    
T  32798344 gaagatgaagaaaaagaaaaaaagttaagtggtgatggttcaacgtaagataaaatacacctacgcaatccagcggtcctccttttaaagaaaagatcaa 32798443  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattt 468  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| | ||||||||||||| |  | ||||    
T  32798444 acggtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacatcattt-gagttaaacttaaccgtgaggattt 32798542  T
Q  469 atttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||  |||||||  ||||  | ||||||||||| |    |||||||||||||||||||||||||||||    
T  32798543 atttgacaaacggagaaaaaattgagggactaaaaggtacgttttattaattgtgggaccaaaatgaaaa 32798612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 308 - 437
Target Start/End: Original strand, 20180525 - 20180655
Alignment:
Q  308 tacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtgg 406  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  20180525 tacatcctaagataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtgg 20180624  T
Q  407 accactcttaaagttggtccaccatatacat 437  Q
    ||||||||||| ||| |||||| ||| ||||    
T  20180625 accactcttaatgttagtccactatagacat 20180655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 269 - 538
Target Start/End: Complemental strand, 42871119 - 42870849
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| ||| | |||||||||| ||   |   ||||||||||||| || || ||||| |||||||  || |||||||| | | ||||    
T  42871119 agaagatgaagaaagggagaaataattaggtgttgttgactcgcggtaagataaaatacacatgcgtaattcaatggtcatccttttaaaacacagatca 42871020  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||| |||||| || | |||||| | |||| ||||||||||||||||  ||||||||| ||| ||||| ||||||||||||||||||  |  | |||    
T  42871019 aacggtttaaattacaaaatttaataaggtctacggtggaccactcttaagattggtccacaatagacatcttttggggttaaacttaacagtcaggatt 42870920  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     ||| || |||| || ||||| ||||||||||||||||    |||||||||||||||||||||||||||||    
T  42870919 cattcggcaaacagacgaaaaagtaagggactaaaacgtacgttttattaattgtgggaccaaaatgaaaa 42870849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 297 - 417
Target Start/End: Complemental strand, 17455322 - 17455202
Alignment:
Q  297 ggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaatagga 396  Q
    |||||| |||||||||||||||||||||||||| || |||||| |||||| ||||||||||| | | || |||||||| |||||||||||||||||| ||    
T  17455322 ggtgttagtggtacatcgtaagataaaatagacctgcgtaatctaatggtcctcttttaaaaaatagataaaacggttcaaattaaaataattaataaga 17455223  T
Q  397 tctatggtggaccactcttaa 417  Q
    |||||||||||||||| ||||    
T  17455222 tctatggtggaccacttttaa 17455202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 237 - 548
Target Start/End: Original strand, 8571394 - 8571707
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaagga-aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 335  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||   | |||| | |||| ||||| |||||||||||||| || |||||||  || |    
T  8571394 tgtgagttgaagatgatgaagattattaaggtagaagatgaagaaagaaataaaagaattagttgttgttggtacatcgtaagttacaatagacacgtat 8571493  T
Q  336 aatccaatgg---ttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||||||||   |||| |||||| | | | ||||||| ||| |||||||||   |||||| | | |||||||||||| | |||||||||||||||||||    
T  8571494 aatccaatggtcattct-ttttaagaaacagatcaaacagtttaaattaaaaagtttaataaggtatatggtggaccatttttaaagttggtccaccata 8571592  T
Q  433 tacatcatttggggttaaacttaac--cattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaa 530  Q
     |   ||||||||||||||||||||    | || ||||||||||||||||||  ||||  | | |||| ||||||    |||||||||||||  ||||||    
T  8571593 ga---catttggggttaaacttaacagactagggatttatttggtaaacggagaaaaaaatgaaggaccaaaacgtacgttttattaattgtatgaccaa 8571689  T
Q  531 aatgaaaataagaaatta 548  Q
    |||||||||  |||||||    
T  8571690 aatgaaaatgtgaaatta 8571707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 313 - 457
Target Start/End: Original strand, 9854735 - 9854878
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    |||||||||||| | || || |||||||||||   || ||||||||| |||||||||| |||| |||||| || ||||||||||||||||||||||||||    
T  9854735 cgtaagataaaacacacatgcgtaatccaatgacccttcttttaaaaaaaaaatcaaatggtttaaattagaagaattaataggatctatggtggaccac 9854834  T
Q  412 tcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||||||||||||||||| ||||  || ||||||||| |||||    
T  9854835 tcttaaagttggtccaccatagacat--ttgggggttaaagttaac 9854878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 17338150 - 17338064
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  17338150 atttatttggcaaacggagaaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 17338064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 364 - 538
Target Start/End: Original strand, 45281096 - 45281268
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    ||||||||||| |||||||||  ||||||||||| |||||| |||||||||||| ||||||||||| || ||||||||| || ||||| |||||  ||||    
T  45281096 atcaaacggtttaaattaaaaatattaataggatttatggtagaccactcttaaggttggtccaccgtagacatcattt-ggattaaagttaactgttgg 45281194  T
Q  464 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     |||||||||| ||| ||| |||||| | | |||  |||||   ||||||||||||||| |||||||||||||||    
T  45281195 gatttatttggcaaatggaggaaaatctgaaggatcaaaac-atatttttattaattgttggaccaaaatgaaaa 45281268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 438 - 551
Target Start/End: Complemental strand, 13116466 - 13116353
Alignment:
Q  438 catttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 537  Q
    ||||||| |||||| |||||  | || |||||||||| ||||||| |||||||| | |||||||||||||| ||||||||||||||||||||||||||||    
T  13116466 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgaaggactaaaacgccacttttattaattgtgggaccaaaatgaaa 13116367  T
Q  538 ataagaaattaaat 551  Q
    | | ||||||||||    
T  13116366 acatgaaattaaat 13116353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 348 - 539
Target Start/End: Complemental strand, 4810691 - 4810504
Alignment:
Q  348 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttgggg 446  Q
    ||||||||| | |||| ||||||| ||| |||||||||  |||||||||||||||||||||||||||||||      ||||||||| |||||||||||||    
T  4810691 ctcttttaataaaaaagatcaaacagtttaaattaaaaatattaataggatctatggtggaccactcttaa-----ttccaccatagacatcatttgggg 4810597  T
Q  447 ttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaat 539  Q
    ||||| |||||| | || |||||||||| |||||||  ||||| | | |||| |||||     ||||||||||| |||||||||||| |||||    
T  4810596 ttaaagttaaccgtcgggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatgggaccaaaataaaaat 4810504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 439 - 551
Target Start/End: Original strand, 17339530 - 17339642
Alignment:
Q  439 atttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||| ||||||||||||  |  | |||||||||| ||||||| ||||| || ||||||||||| |||||||||||||||||| |||||||||||||||    
T  17339530 atttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggactaaaatgccatttttattaattgttggaccaaaatgaaaa 17339629  T
Q  539 taagaaattaaat 551  Q
    || ||||||||||    
T  17339630 tatgaaattaaat 17339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 364 - 548
Target Start/End: Original strand, 44076269 - 44076453
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    |||||| |||| ||||||||| |||||||| ||| ||||||||| || | |||| |||| ||||||||| ||||||||||||||||||||||||  | ||    
T  44076269 atcaaatggtttaaattaaaaaaattaataagatttatggtggatcatttttaatgttgttccaccatagacatcatttggggttaaacttaactgtagg 44076368  T
Q  464 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
     |||||||||| ||||||| |||||  | ||| || ||||      |||||||||||||||||||||||| |||||  |||||||    
T  44076369 gatttatttggcaaacggaggaaaaattgaggcaccaaaagatacgttttattaattgtgggaccaaaataaaaatttgaaatta 44076453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 313 - 458
Target Start/End: Original strand, 31845652 - 31845793
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || |  |||||| ||||||  || ||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  31845652 cgtaagataaaatacacctacgtaatctaatggtcatcctttaaaaaaaagatcaaacagtttacattaaaataattaataggacctatggtggaccact 31845751  T
Q  413 cttaaagttggtccaccatatacatcatttggggttaaacttaacc 458  Q
    ||| |||||||| ||||||| |   |||||||||||||| ||||||    
T  31845752 ctt-aagttggttcaccataga---catttggggttaaagttaacc 31845793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 364 - 473
Target Start/End: Complemental strand, 42877825 - 42877720
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||| |   |||||||||||||| |||||| | ||    
T  42877825 atcaaagggttgaaattaaa-taattaataggatctatggtggaccattcttaaggttggtccaccataca---catttggggttaaagttaaccgtcgg 42877730  T
Q  464 aatttatttg 473  Q
     |||||||||    
T  42877729 gatttatttg 42877720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 371 - 551
Target Start/End: Original strand, 42100022 - 42100199
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 470  Q
    |||| ||||||| | |||||||| | |||| | ||||||||| |||| |||||||||||| | ||||   |||  |||||| |||||  | || | ||||    
T  42100022 ggttaaaattaacaaaattaataaggtctacgatggaccacttttaaggttggtccaccaaagacat---ttgaagttaaagttaacagtcgggaattat 42100118  T
Q  471 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||| ||||||| |||||| | |||||  |||||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  42100119 ttggcaaacggaggaaaatatgagggatcaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaattaaat 42100199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 270 - 425
Target Start/End: Original strand, 40437409 - 40437565
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa---tc 366  Q
    |||||||||||||||| |||| | ||||| |||||| |||||||||| | |||||||||| || || ||| |||| |  |||||||||| || ||   ||    
T  40437409 gaagatgaagaaaagggaaaaaagttaggcgttggttgtacatcgtagg-taaaatagacatgcgtgatctaatg-tcatcttttaaaaaaataaatatc 40437506  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtc 425  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  40437507 aaacagtttaaattaaaataattaataggatctacggtggaccacttttaaggttggtc 40437565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 314 - 548
Target Start/End: Complemental strand, 6398041 - 6397809
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||| | |||||||||| |||| |  || |||| ||| | | |||||| |||| ||||||||| |||||||| | ||||||||||||||||    
T  6398041 gtaagataaaatacatttgtgtaatcaaatgatcatcctttttaaaaacagatcaaatggtttaaattaaaaaaattaataaggtctatggtggaccact 6397942  T
Q  413 cttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttt 512  Q
     | || ||||||  ||||||    | |||||| |||||| |||||  |    |||||||||| |||||||  ||||  | ||||||||||| |  | |||    
T  6397941 gtaaaggttggtttaccatag---ttatttggagttaaatttaacattcatgatttatttggcaaacggagaaaaaaatgagggactaaaatgtaagttt 6397845  T
Q  513 tattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||||||||||||||||||||| |||||||    
T  6397844 tattaattgtgggaccaaaatgaaaatatgaaatta 6397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 10669353 - 10669426
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  10669353 atcaatcggtttaaattaaaatatttaataggatctatggtggaccactcttaaggttggttcaccatagacat 10669426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 465 - 548
Target Start/End: Complemental strand, 211704 - 211621
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||||||||||||||  ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||| | |||||||    
T  211704 atttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaatta 211621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 240552 - 240635
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||||||||||||||  ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||| | |||||||    
T  240552 atttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaatta 240635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 465 - 548
Target Start/End: Complemental strand, 725327 - 725244
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||||||||||||||  ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||| | |||||||    
T  725327 atttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaatta 725244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 793907 - 793990
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||||||||||||||  ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||| | |||||||    
T  793907 atttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaatta 793990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 355 - 457
Target Start/End: Complemental strand, 43202313 - 43202214
Alignment:
Q  355 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaactt 454  Q
    |||| ||||||||||| ||| ||||| |||||| ||||||||||||||||||||||||||||| |||| |||||  |||| || ||||||||||||| ||    
T  43202313 aaaaaaaaaatcaaacagtttaaatttaaataactaataggatctatggtggaccactcttaaggttgatccac--tatagat-atttggggttaaaatt 43202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 351 - 538
Target Start/End: Original strand, 26697728 - 26697912
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaa 450  Q
    |||||||| | ||||| || |||  ||||||||  ||||| |||| |||||||||||| |    ||| |||||||||||||| ||||   ||||||||||    
T  26697728 ttttaaaaaataaatcgaatggtataaattaaagaaattactagggtctatggtggactatatataatgttggtccaccataaacat---ttggggttaa 26697824  T
Q  451 acttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||| ||| | ||||||| |  ||| ||||||||| || |||||||||||||    ||||||||||| |||||| ||||||||||    
T  26697825 acttaacaattaggatttattcgacaaaaggaagaaaaagtgagggactaaaacgtacgttttattaattatgggactaaaatgaaaa 26697912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 364 - 538
Target Start/End: Complemental strand, 32694037 - 32693866
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    ||||||||||| ||||||| | |||||||| | |||||| | | ||||| |||| ||||||||| ||||||   |||||   |||||| |||||  ||||    
T  32694037 atcaaacggttaaaattaataaaattaataaggtctatgataggccacttttaaggttggtccatcatata---catttaaagttaaagttaactgttgg 32693941  T
Q  464 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     |||||||||| ||||||| |||||| | | |||| ||| ||    |||||||||||||||||||||||||||||    
T  32693940 gatttatttggcaaacggaggaaaatctgaaggaccaaagcgtatgttttattaattgtgggaccaaaatgaaaa 32693866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 42878732 - 42878806
Alignment:
Q  357 aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| |||||| |||| | |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  42878732 aagaaagatcaaagggttaagattaaa-taattaataggatctatggtggaccacacttaaggttggtccaccata 42878806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 438
Target Start/End: Original strand, 42362668 - 42362732
Alignment:
Q  373 ttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatc 438  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| |||||    
T  42362668 ttgaaattaaaa-aattaataggatctatgatgaaccactcttaatgttggtccaccatagacatc 42362732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 505
Target Start/End: Original strand, 42872120 - 42872236
Alignment:
Q  386 aattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaaga 485  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||| |   |||||| ||||||| |||||| |  | |||||||||  ||||||| ||    
T  42872120 aattaataggatctatggtagaccactcttaaggttggtctaccataga---catttgaggttaaagttaaccgtcaggatttatttgacaaacggagga 42872216  T
Q  486 aaatgtaagggactaaaacg 505  Q
    ||| || | |||||||||||    
T  42872217 aaaagtgaaggactaaaacg 42872236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 364 - 456
Target Start/End: Original strand, 14840807 - 14840896
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaa 456  Q
    ||||||||||| ||||||||| | |||||| || |||||||||| |||| |||| |||||||||||||| |   |||||| ||||||||||||    
T  14840807 atcaaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttggtccaccataga---catttgtggttaaacttaa 14840896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 269 - 421
Target Start/End: Complemental strand, 22620191 - 22620035
Alignment:
Q  269 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa--- 364  Q
    ||||||||||||||| | | ||| | |||||||||| |||| || | | ||||| ||||||| ||  ||||| |||||| ||||||||||| |||||       
T  22620191 agaagatgaagaaaatgtacaaaaaattaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctcttttaaaaaaaaaaaaa 22620092  T
Q  365 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagtt 421  Q
    |||||||||| |||| ||||| ||||||| |||||||  |||||  |||||||||||    
T  22620091 tcaaacggtttaaataaaaatgattaatatgatctataatggacagctcttaaagtt 22620035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 38696520 - 38696427
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaa 456  Q
    |||||||||| |||| |||||| || |||||||  |||||||||||||||||| |||| ||||||| |||||| |   ||||| |||||||||||||    
T  38696520 aaaaatcaaagggttaaaattataaaaattaattagatctatggtggaccacttttaaggttggtctaccataga---catttagggttaaacttaa 38696427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 264 - 411
Target Start/End: Original strand, 6398323 - 6398471
Alignment:
Q  264 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatgg------ttctcttttaaa 357  Q
    |||| |||||||||||||||||||| | | |||||||||| || | || ||||||||||| |||||||   |||||||||||      ||||||||        
T  6398323 aaggaagaagatgaagaaaaggaaataaaattaggtgttgttgattcaccgtaagataaagtagacttacataatccaatggtaagtattctcttt---- 6398418  T
Q  358 agaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    | ||||||||||||||| ||||||||| |||||||| | |||| ||||||||||    
T  6398419 ataaaaatcaaacggtttaaattaaaa-aattaataaggtctacggtggaccac 6398471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 28418915 - 28418842
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| |||||||||||||||||    
T  28418915 atttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 28418842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 467 - 538
Target Start/End: Complemental strand, 32797245 - 32797174
Alignment:
Q  467 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||||||||| |||||  | ||||||| |||||    |||||||||||||||||||||||||||||    
T  32797245 ttatttggtaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 32797174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 410
Target Start/End: Complemental strand, 37400988 - 37400942
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||    
T  37400988 atcaaacggtttatattaaaaaaattaataggatctatggtggacca 37400942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 22551343 - 22551298
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaa 282  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||    
T  22551343 tgtgagttaaagatgatgaagattagtaaggtagaagatgaagaaa 22551298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 437
Target Start/End: Complemental strand, 24305266 - 24305177
Alignment:
Q  349 tcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||||||||| |||| ||||||  |||||| || ||| ||||||||||||||| | | || ||||||||| |||||||||||||| ||||    
T  24305266 tcttttaaaacaaaagatcaaatagttgaagtttaaaaaattaataggatctaagatagatcactcttaatgttggtccaccatagacat 24305177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 437
Target Start/End: Complemental strand, 30786885 - 30786812
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||||||||| ||||||| | |||||||| | | |||| ||||||||| ||||||||| ||||||||| ||||    
T  30786885 atcaaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccatagacat 30786812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 212719 - 212802
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||  ||||| | ||||| || |||||||||||| ||  |||| ||||||||||||| |||||||||||  |||||||    
T  212719 atttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 212802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 548
Target Start/End: Complemental strand, 239535 - 239452
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||  ||||| | ||||| || |||||||||||| ||  |||| ||||||||||||| |||||||||||  |||||||    
T  239535 atttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 239452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 726342 - 726425
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||  ||||| | ||||| || |||||||||||| ||  |||| ||||||||||||| |||||||||||  |||||||    
T  726342 atttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 726425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 548
Target Start/End: Complemental strand, 792890 - 792807
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||  ||||| | ||||| || |||||||||||| ||  |||| ||||||||||||| |||||||||||  |||||||    
T  792890 atttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 792807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 798843 - 798926
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||  ||||| | ||||| || |||||||||||| ||  |||| ||||||||||||| |||||||||||  |||||||    
T  798843 atttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 798926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 418
Target Start/End: Complemental strand, 13513638 - 13513571
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaa 418  Q
    |||||||  |||||||||| |||| ||||||||| |||||||| | | |||||||||||||| |||||    
T  13513638 ttttaaagaaaaaatcaaatggttaaaattaaaaaaattaataaggtatatggtggaccacttttaaa 13513571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 418
Target Start/End: Complemental strand, 13603171 - 13603104
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaa 418  Q
    |||||||  |||||||||| |||| ||||||||| |||||||| | | |||||||||||||| |||||    
T  13603171 ttttaaagaaaaaatcaaatggttaaaattaaaaaaattaataaggtatatggtggaccacttttaaa 13603104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 493 - 548
Target Start/End: Complemental strand, 23703038 - 23702983
Alignment:
Q  493 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||  ||||| ||||||||| | |||||||||||||||||||| ||||||    
T  23703038 agggactaattcgccacttttattaaatatgggaccaaaatgaaaataacaaatta 23702983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 493 - 548
Target Start/End: Original strand, 23708784 - 23708839
Alignment:
Q  493 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||  ||||| ||||||||| | |||||||||||||||||||| ||||||    
T  23708784 agggactaattcgccacttttattaaatatgggaccaaaatgaaaataacaaatta 23708839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 32552507 - 32552457
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||| ||||||||| |||||||| | | ||||||||||||    
T  32552507 aaaaatcaaacggttaaaattaaaagaattaataaggtttatggtggacca 32552457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 6398504 - 6398577
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||  ||||||| |||||  | ||||||||||||||   ||||||||||| || ||||||||||||||    
T  6398504 atttatttgacaaacggaggaaaaaatgagggactaaaacgcttgttttattaattatgagaccaaaatgaaaa 6398577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 26696641 - 26696568
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||| ||| ||||| || |||||| |||| |    |||||||||||||||||||||||||||||    
T  26696641 atttatttggcaaatggaggaaaaagtgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaa 26696568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 28419037 - 28418948
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||| | || |||||||||||||| || |||||||    
T  28419037 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaataggcatgcgtaatccaatggttttcctttaaaa 28418948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 28420181 - 28420254
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||  ||||||| |||||  | |||||||||||||    ||||||||||| |||||||||||||||||    
T  28420181 atttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 28420254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-101; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 268 - 551
Target Start/End: Original strand, 18616817 - 18617099
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||  || ||||||||    
T  18616817 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctcttttttaaaaaaaatca 18616915  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||||||||| |||||||||||||||||||||||   |||| |||    
T  18616916 aacggttgaaattaaaataattaataggatctatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaatagttgggatt 18617015  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  18617016 tatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 18617099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 268 - 551
Target Start/End: Complemental strand, 29219689 - 29219408
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||     |||| |||    
T  29219689 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctctttttttttaaaa-tca 29219592  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||  |||| |||    
T  29219591 aacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatt 29219492  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  29219491 tatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 29219408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 268 - 551
Target Start/End: Complemental strand, 29332988 - 29332707
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||     |||| |||    
T  29332988 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctctttttttttaaaa-tca 29332891  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||  |||| |||    
T  29332890 aacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatt 29332791  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  29332790 tatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 29332707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 268 - 551
Target Start/End: Original strand, 1085198 - 1085479
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaag--aaaaat 365  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| || ||  ||||||||| ||||||||||       ||||||    
T  1085198 tagaagatgaagaaaagaaaaaaaatt-aggtgttggtggtacatcgtaagataaaataaacctgcttaatccaattgttctcttttttttttaaaaaat 1085296  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaa 465  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||    |||||||||||  |||  |    
T  1085297 caaacggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatgatccaccataaacatcattt-ttattaaacttaacggttgtga 1085395  T
Q  466 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||||| ||||||| |||||||  |||||| ||||||||| ||||||||| ||||| ||||||||||||| | ||||||||||    
T  1085396 tttatttggcaaacggaggaaaatg--agggaccaaaacgccaattttattaaatgtggtaccaaaatgaaaacatgaaattaaat 1085479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 267 - 538
Target Start/End: Complemental strand, 17459565 - 17459289
Alignment:
Q  267 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt---------aaa 357  Q
    |||||||||||||||| | |||||   |||||||||||||||| ||| || ||||||||||    || ||||||||||||||||||||         |||    
T  17459565 gtagaagatgaagaaaggaaaaaa---ttaggtgttggtggtatatcata-gataaaataggtcagtctaatccaatggttctctttttttaaaaaaaaa 17459470  T
Q  358 agaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
      ||||||||||||||| |||||| |||||||||||||||||||| | || |||| ||||  || |||||||||| |||||||||||||||||||||||     
T  17459469 taaaaaatcaaacggtttaaattataataattaataggatctatgttagatcacttttaagattcgtccaccatagacatcatttggggttaaacttaaa 17459370  T
Q  458 cattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
      |  |||||||||||| ||||||| ||||| || ||||||| |||||    |||||||||||||| ||||||||||||||    
T  17459369 agtcagaatttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgtgaccaaaatgaaaa 17459289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 270 - 548
Target Start/End: Original strand, 42641672 - 42641950
Alignment:
Q  270 gaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atca 367  Q
    |||||||||||||| |||||| |  ||| ||||||  ||| || |||||||||||||| || |  || |||||| | ||||||||||||| |||| ||||    
T  42641672 gaagatgaagaaaaagaaaaaaaagttaagtgttgaaggttcaacgtaagataaaatacacctacgtgatccaacgattctcttttaaaaaaaaagatca 42641771  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||| ||||| |||||||   |  | |||    
T  42641772 aacagtttaaattaaaataattaataggatctatggtagaccactcttaaggttggcccaccatagacatcattt-gggttgaacttaattgtgaggatt 42641870  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||| |||||||| |||| ||  ||||| |||| |    ||||||||||| |||||||||||| |||||  |||||||    
T  42641871 tatttggcaaacggaa-aaaaagtgggggaccaaaaggtgcgttttattaattatgggaccaaaataaaaatttgaaatta 42641950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 270 - 538
Target Start/End: Complemental strand, 32469452 - 32469184
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 369  Q
    |||||||||||||| |||||| | ||| |||||| |||| ||  |||||||| |||| || | ||| ||| || ||| |||  || ||  ||| ||||||    
T  32469452 gaagatgaagaaaaagaaaaaaagttaagtgttgatggttcaatgtaagatacaatacacctatgtgatctaacggtcctccatttaataaaatatcaaa 32469353  T
Q  370 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattta 469  Q
     |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||  | |||||    
T  32469352 gggtttaaattaaaataattaataggatctatagtggaccactcttaaagttggtccaccatatacataattt-gagttaaacttaactataaggattta 32469254  T
Q  470 tttggtaaacggaagaaaatgtaagggactaaaacg--ccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||  |||||| ||||| || | |||| |||| |  |   ||||||||||||||||| |||||||||||    
T  32469253 tttgg-caacggaggaaaaagtgaaggaccaaaaggtacacgttttattaattgtgggatcaaaatgaaaa 32469184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 335 - 538
Target Start/End: Complemental strand, 43033319 - 43033118
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatat 433  Q
    |||||||||||| |||||||| ||||||  |||| | |||| |||||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||     
T  43033319 taatccaatggtcctcttttagaagaaatgatcacaaggtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatag 43033220  T
Q  434 acatcatttggggttaaacttaaccattg-gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaa 532  Q
    ||||   ||| ||||||||||||| || | | |||||||||| ||||||| ||||| || |||||| |||| |    |||||||||||||||||||||||    
T  43033219 acat---ttgaggttaaacttaac-atcgaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaa 43033124  T
Q  533 tgaaaa 538  Q
    ||||||    
T  43033123 tgaaaa 43033118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 241 - 457
Target Start/End: Original strand, 34513336 - 34513551
Alignment:
Q  241 agttgaagatgatgaagatttataaggtagaagatgaagaaa--aggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaat 338  Q
    ||||||||||||||||||||  ||||||||||||||||||||  | |||||| ||| || ||||| ||||||| |||||| || |||||||  |  ||||    
T  34513336 agttgaagatgatgaagattagtaaggtagaagatgaagaaagaaagaaaaaaatt-agttgttgttggtacaccgtaagttacaatagacacgcataat 34513434  T
Q  339 ccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||||| |  |||||| ||| || | ||||||||||| ||||||||| |||||||| | ||||||||||| ||||||||| ||||||| ||||||||       
T  34513435 ccaatgatcatctttttaaaaaacagatcaaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttggtcaaccatata--- 34513531  T
Q  438 catttggggttaaacttaac 457  Q
    ||||||||||||| ||||||    
T  34513532 catttggggttaagcttaac 34513551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 269 - 457
Target Start/End: Complemental strand, 8321064 - 8320871
Alignment:
Q  269 agaagatgaagaaaagga---aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aa 364  Q
    ||||||||||||||| ||   |||| | |||||||||| |||| || | | |||||||||||||||| || ||| |||| | ||||||||||| ||| ||    
T  8321064 agaagatgaagaaaaagataaaaaaaaattaggtgttgatggtgcaccattagataaaatagacttgcgtgatcaaatgttcctcttttaaaaaaaacaa 8320965  T
Q  365 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatataca-tcatttggggttaaacttaac 457  Q
    |||||||||| ||||||||||||||||||  |||||||||||||| ||||||| | |||||||||||| | |  |||||||||||||| |||||    
T  8320964 tcaaacggtttaaattaaaataattaatataatctatggtggaccgctcttaaggatggtccaccatagatagacatttggggttaaaattaac 8320871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 366 - 548
Target Start/End: Original strand, 11317277 - 11317458
Alignment:
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaa 465  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||| | ||||||||||||  |  | |    
T  11317277 caaacgatttaaattaaaataattaataggatctatggtagaccactcttaaggttggtctaccatagacatcattt-gagttaaacttaactgtgagga 11317375  T
Q  466 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||||  ||||||| |||||  | |||||| ||||      ||||||||||||||||||||||||||||||  |||||||    
T  11317376 tttatttgccaaacggaggaaaaattgagggaccaaaatatatgttttattaattgtgggaccaaaatgaaaatttgaaatta 11317458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 18615625 - 18615539
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  18615625 atttatttggcaaacggaggaaaatgtaggggactaaaaagccatttttattaattgtgagaccaaaatgaaaatatgaaattaaat 18615539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 29220887 - 29220969
Alignment:
Q  469 atttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  29220887 atttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaatatgaaattaaat 29220969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 29334186 - 29334268
Alignment:
Q  469 atttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  29334186 atttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaatatgaaattaaat 29334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 313 - 457
Target Start/End: Original strand, 4920916 - 4921057
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || || ||||||||||| | ||| ||| ||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||| |    
T  4920916 cgtaagataaaatacacctgcgtaatccaatgatcctccttttaaa-aaaaatcaaacggtttaaattagaataattaataggatttatggtggaccatt 4921014  T
Q  413 cttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
     |||||||||||| |||||| ||||  || ||||||||| |||||    
T  4921015 tttaaagttggtctaccatagacat--ttgggggttaaagttaac 4921057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 364 - 538
Target Start/End: Original strand, 6030377 - 6030550
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    ||||||||||| |||||||||  |||||||||||||||||| || ||||||||| ||||||||||| || ||||||||| |||||||| |||||  |||     
T  6030377 atcaaacggtttaaattaaaaatattaataggatctatggtagatcactcttaaggttggtccaccgtagacatcattt-gggttaaagttaactgttga 6030475  T
Q  464 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     |||||||||| |||  || |||||| | | |||  ||||||   |||| ||||||||||||| |||||||||||    
T  6030476 gatttatttggcaaatagaggaaaatatgaaggatcaaaacgtacttttaattaattgtgggatcaaaatgaaaa 6030550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 34469067 - 34468981
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||    
T  34469067 atttatttggcaaacagaagaaaatgtgagggactaaaacgtcatttttattaattgtgcgaccaaaatgaaaacatgaaattaaat 34468981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 269 - 391
Target Start/End: Complemental strand, 35903844 - 35903719
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctt---ttaaaagaaaaat 365  Q
    |||||||||||||||||||||| | |||||| ||| ||||||||| ||||||||||||||| ||| ||||| ||||||||| ||     |||| ||||||    
T  35903844 agaagatgaagaaaaggaaaaaaagttaggtattgctggtacatcataagataaaatagacatgtataatctaatggttcttttaaaaaaaaaaaaaaat 35903745  T
Q  366 caaacggttgaaattaaaataattaa 391  Q
    ||||||||| ||||||||||| ||||    
T  35903744 caaacggtttaaattaaaatatttaa 35903719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 269 - 437
Target Start/End: Original strand, 28611066 - 28611233
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || | |||||||||||| || || ||||| |||||   ||| ||| ||| |||||||||    
T  28611066 agaagatgaagaaagggagaaataattaagtgttgttgactcaccataagataaaatacacctgcgtaattcaatgaccctccttttaaaaaaaaatcaa 28611165  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||||| |||||||| ||||||||||||||||| |||||||| | ||||||| ||||||||||| ||||    
T  28611166 acggtttaaattaaa-taattaataggatctatagtggaccatttttaaagtcggtccaccatagacat 28611233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 463 - 551
Target Start/End: Original strand, 44192451 - 44192539
Alignment:
Q  463 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||||  ||||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||||||| | ||||||||||    
T  44192451 gaatttatttgacaaacggaggaaaatgtgagggactaaaatgccatttttattaattttgggatcaaaatgaaaacatgaaattaaat 44192539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 6030714 - 6030628
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| |||||  ||||| |||||||||||| |||||||||||||||||| |||||||||| | ||||||||||    
T  6030714 atttatttggcaaacggaggaaaaaataaggaactaaaacgccaattttattaattgtgggactaaaatgaaaacatgaaattaaat 6030628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 364 - 457
Target Start/End: Complemental strand, 11547868 - 11547776
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||||||| |||||| || | |||||| ||||||||||||||||||| ||| |||||||||  ||| ||||||||||||||||||||||||    
T  11547868 atcaaacggtttaaattataa-atttaatacgatctatggtggaccactcctaaggttggtccatgatagacatcatttggggttaaacttaac 11547776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 313 - 437
Target Start/End: Original strand, 43034336 - 43034451
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||||||| ||  ||||||||||||  |||||||||| |  |||||||||||| |||||         |||||||||||||||||||||||    
T  43034336 cgtaagataaaatagacatgcataatccaatggtcatcttttaaaaaattaatcaaacggtttaaatt---------aataggatctatggtggaccact 43034426  T
Q  413 cttaaagttggtccaccatatacat 437  Q
    |||||||||| ||||||||| ||||    
T  43034427 cttaaagttgatccaccatagacat 43034451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 364 - 420
Target Start/End: Complemental strand, 35903715 - 35903659
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagt 420  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  35903715 atcaaacggtttaaattaaaatatttaataggatctatggtggaccactctaaaagt 35903659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 446 - 551
Target Start/End: Complemental strand, 1083116 - 1083011
Alignment:
Q  446 gttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaa 545  Q
    |||||| |||||  |||| ||||| |||| |||||||  ||||  | | |||| ||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  1083116 gttaaagttaacacttgggatttaattggcaaacggagaaaaagatgacggaccaaaacaccatttttattaaatgtgggaccaaaatgaaaatatgaaa 1083017  T
Q  546 ttaaat 551  Q
    ||||||    
T  1083016 ttaaat 1083011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 34467848 - 34467641
Alignment:
Q  239 tgagttgaagatgatgaagatttataaggtagaagatgaagaaa------aggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttg 332  Q
    |||||| |||||||||||||||  |||||||||| |  ||||||      | |||||| |||||| ||||| |||||||||||||| || |||||||       
T  34467848 tgagttaaagatgatgaagattagtaaggtagaatactaagaaagaaagaaagaaaaaaatttagttgttgttggtacatcgtaagttacaatagacaca 34467749  T
Q  333 tgtaatccaatggttctc-ttttaaaagaaaaat--caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    | ||||||| ||||  || |||||||| ||||||  ||||| ||| ||||||||| | |||||| | | ||||||||||||||||||| ||| ||||| |    
T  34467748 tataatccagtggtcatcattttaaaaaaaaaatatcaaacagtttaaattaaaaaacttaataaggtttatggtggaccactcttaaggtttgtccatc 34467649  T
Q  430 atatacat 437  Q
    ||| ||||    
T  34467648 atagacat 34467641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 270 - 548
Target Start/End: Original strand, 28562620 - 28562899
Alignment:
Q  270 gaagatgaagaaaaggaaaaacat---ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaat 365  Q
    ||||| ||||||||||||||| |    ||||||| | |||||| || ||||||||||||| || | || |||||||  || |||||| | ||| ||| ||    
T  28562620 gaagaggaagaaaaggaaaaaaaaaaattaggtgctagtggtatatggtaagataaaataaacatatgcaatccaaccgtcctctttcttaaaaaaagat 28562719  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactct-taaagttggtccaccatatacatcatttggggttaaacttaaccattgga 464  Q
    |||| |||| |||||  || | |||||| | |||||||||||| | ||| ||| |||||||||||||||| ||   ||||| |||||||||||  |  |     
T  28562720 caaagggttaaaattggaaaatttaataaggtctatggtggacta-tctataatgttggtccaccatatatat---ttgggattaaacttaacagtctgg 28562815  T
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||  ||||||| ||||| || |||||| |||| |    ||||||||||| ||||||||||||||||||  |||||||    
T  28562816 atttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaattatgggaccaaaatgaaaatttgaaatta 28562899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 547
Target Start/End: Original strand, 6032321 - 6032403
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatt 547  Q
    |||||||||| |||| || |||||  || ||||||||||| ||||||||||||||||||| |||||||| |||| | ||||||    
T  6032321 atttatttggcaaacagaggaaaaaatacgggactaaaacaccatttttattaattgtggaaccaaaataaaaacatgaaatt 6032403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 386 - 538
Target Start/End: Complemental strand, 11316118 - 11315969
Alignment:
Q  386 aattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaaga 485  Q
    |||||||| | |||| ||||||||| | |||| |||| ||||||||| ||||   ||||  |||||||||||    || |||||||||| ||||||| ||    
T  11316118 aattaataaggtctacggtggaccatttttaaggttgatccaccatagacat---ttggaattaaacttaacagccgggatttatttggcaaacggagga 11316022  T
Q  486 aaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||  | ||||||| |||||    |||||||||||||||||||||||||||||    
T  11316021 aaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 11315969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 493 - 551
Target Start/End: Complemental strand, 44191217 - 44191159
Alignment:
Q  493 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||||||| || |||||||||||||||||||| |||||||||| | ||||||||||    
T  44191217 agggactaaaatgcaatttttattaattgtgggactaaaatgaaaacatgaaattaaat 44191159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 364 - 457
Target Start/End: Complemental strand, 34464176 - 34464086
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||| ||| ||||||||| |  ||||| | ||||||||||||||||||||| ||||||| || ||| |   ||||||||||||||||||||    
T  34464176 atcaaacagtttaaattaaaaaatctaataaggtctatggtggaccactcttaaggttggtcaacgataga---catttggggttaaacttaac 34464086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 354
Target Start/End: Complemental strand, 7436766 - 7436685
Alignment:
Q  273 gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt 354  Q
    ||||| ||||| ||| || | ||||||| | |||||||||| ||||||||||||||  |||||||||||| ||| |||||||    
T  7436766 gatgaggaaaatgaagaaaagttaggtggtagtggtacatcctaagataaaatagatatgtgtaatccaacggtcctctttt 7436685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 389 - 430
Target Start/End: Original strand, 16295150 - 16295191
Alignment:
Q  389 taataggatctatggtggaccactcttaaagttggtccacca 430  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  16295150 taataggatctatggtggaccactgttaaggttggtccacca 16295191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 17460691 - 17460764
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| |||||| | |||||| ||||||    ||||||||||||||||| |||||||||||    
T  17460691 atttatttgggaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaa 17460764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 546
Target Start/End: Complemental strand, 249091 - 249052
Alignment:
Q  507 catttttattaattgtgggaccaaaatgaaaataagaaat 546  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  249091 catttttattaaatatgggaccaaaatgaaaataagaaat 249052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 7983590 - 7983653
Alignment:
Q  348 ctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    ||||||||||  |||||||||| || ||||||| ||| | |||||| |||||||||||||||||    
T  7983590 ctcttttaaagaaaaaatcaaaaggatgaaatttaaaaatttaataagatctatggtggaccac 7983653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 493 - 548
Target Start/End: Original strand, 12359714 - 12359769
Alignment:
Q  493 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||| ||||||||| |||||||||||||||||| |||| ||||| | |||||||    
T  12359714 agggaccaaaacgccaattttattaattgtgggactaaaacgaaaacatgaaatta 12359769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 430
Target Start/End: Complemental strand, 30748704 - 30748621
Alignment:
Q  348 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 430  Q
    ||||||||| | |||| |||||||  || |||||||||||||||||| |||||||||||  |||||||||| ||| || |||||    
T  30748704 ctcttttaataaaaaagatcaaacaatttaaattaaaataattaatatgatctatggtgtgccactcttaaggtttgttcacca 30748621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 437
Target Start/End: Complemental strand, 34513149 - 34512947
Alignment:
Q  241 agttgaagatgatgaagatttataaggtagaagatgaagaa--aaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaat 338  Q
    |||||||||||||||| |||  |||||||||||||||||||  || |||||| | |||| ||||| ||||||| |||||| |  ||||||| ||   |||    
T  34513149 agttgaagatgatgaaaattagtaaggtagaagatgaagaaagaaagaaaaata-ttagttgttgttggtacaccgtaagttgcaatagacatgcacaat 34513051  T
Q  339 ccaatgg----ttctcttttaaaagaa-aaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatat 433  Q
     |||  |    || | |||||||| || ||||||||  ||| ||||||||| | |||||| | | ||||||||||||||||||  |||| ||||||||||    
T  34513050 tcaaatgtcattttttttttaaaaaaacaaatcaaatagtttaaattaaaaaatttaataaggtatatggtggaccactcttatggttgatccaccatat 34512951  T
Q  434 acat 437  Q
    ||||    
T  34512950 acat 34512947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 23232380 - 23232330
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||| ||||||||| |||||||| | | ||||||||||||    
T  23232380 aaaaatcaaacggttaaaattaaaagaattaataaggtttatggtggacca 23232330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 404
Target Start/End: Original strand, 16290705 - 16290742
Alignment:
Q  367 aaacggttgaaattaaaataattaataggatctatggt 404  Q
    ||||| || |||||||||||||||||||||||||||||    
T  16290705 aaacgatttaaattaaaataattaataggatctatggt 16290742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 429
Target Start/End: Original strand, 25570753 - 25570846
Alignment:
Q  337 atccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    ||||||||||| || |||||||| ||| |||||||  || ||| ||||||| |||||| | |||||||||||||||   |||||||||| ||||    
T  25570753 atccaatggttttcattttaaaaaaaagatcaaacctttaaaaataaaatatttaataaggtctatggtggaccacctataaagttggttcacc 25570846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 424
Target Start/End: Original strand, 30749161 - 30749293
Alignment:
Q  294 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaattaaaataattaa 391  Q
    |||| ||||| |||| || ||||||||| | ||||| ||  | ||| || ||| |||||||||  || ||| |||| |||||| ||||||||||||||||    
T  30749161 ttagatgttgttggttcaccgtaagatacagtagacatgcatgatctaacggtcctcttttaatcaaaaaagatcatacggtttaaattaaaataattaa 30749260  T
Q  392 taggatctatggtggaccactcttaaagttggt 424  Q
    ||||  || | ||| ||||||||||| ||||||    
T  30749261 taggccctgtagtgaaccactcttaaggttggt 30749293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 269 - 551
Target Start/End: Complemental strand, 17837920 - 17837639
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||| ||  ||||||||||||| || |||  ||||||||||||    
T  17837920 agaagatgaagaaaaggacaaaaaattagatgttggtggtacatcgtaagataaaatagacctgcctaatccaatggttatcgtttttaagaaaaatcaa 17837821  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattt 468  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||  |||| ||||    
T  17837820 acggttgaaattaaaataattaataggatctatggtggaccactcttaatgtttgtccaccatagacatcatttggggttaaacttaactgttgg-attt 17837722  T
Q  469 atttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||||||||||||||||  | |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  17837721 atttggtaaacggaagaaaagatgagggactaaaacgccatttttattaattgtggaaccaaaatgaaaacaataaattaaat 17837639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 269 - 551
Target Start/End: Original strand, 29381542 - 29381823
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||  || |||||||||    
T  29381542 agaagatgaagaaaaggacaaaaaattagatgttggtggtacatcgtaagataaaatagacctgcctaatccaatggttatctttttgaaaaaaaatcaa 29381641  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattt 468  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| | ||||||||||||||||||||||||  |||| ||||    
T  29381642 acggttgaaattaaaataattaataggatctatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaactgttgg-attt 29381740  T
Q  469 atttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||||||| |||||  | | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  29381741 atttggtaaacggaggaaaagatgaaggactaaaacgtcatttttattaattgtgggatcaaaatgaaaataagaaattaaat 29381823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 268 - 551
Target Start/End: Original strand, 5187433 - 5187715
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||| ||||| | |||||||||| ||||||||  ||||||||||||||  ||  |||||||||| | ||||||||||| ||||||||    
T  5187433 tagaagatgaagaaaagaaaaaaaaattaggtgttgatggtacatgataagataaaatagagctgcttaatccaatgatgctcttttaaaataaaaatca 5187532  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||| ||||||||||| |||||||||||||||||||||| |||||| |||| |||||||||| ||| ||| ||||| ||||||||||||||| |  | |||    
T  5187533 aacagttgaaattaatataattaataggatctatggtgaaccacttttaaggttggtccactatagacaacattt-gggttaaacttaaccgtcaggatt 5187631  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||| |||||||  |||| |||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  5187632 tatttggcaaacggacaaaaaggtaaggaactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattaaat 5187715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 268 - 551
Target Start/End: Original strand, 18346563 - 18346843
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    |||||||||||||||| |||| | ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||| ||||||||    
T  18346563 tagaagatgaagaaaatgaaacaaatt-aggtgttggtggtacatcgtaagataaaatagacttgcataatccaatggtttacttttaaaa-aaaaatca 18346660  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||| |||| || |||||||||| ||||||| |||| || | | |||    
T  18346661 aacggtttaaattaaaataattaataggatttatagtggaccactcttaaggttggttcaccgtaaacatcatttgaggttaaaattaa-cagtcggatt 18346759  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||| |||| ||   ||| || |||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18346760 tatttggcaaacagagacaaacgtgagggatcaaaacgccatttttattaattgtgggaccaaaatgaaaatatgaaattaaat 18346843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 269 - 551
Target Start/End: Complemental strand, 23392520 - 23392237
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaat--c 366  Q
    |||||||||||||||| |||   | ||| |||||| ||||  |  |||||||||||||||||||  ||||| ||||||| |||||||||| ||||||  |    
T  23392520 agaagatgaagaaaagaaaattaaattacgtgttgttggtttacagtaagataaaatagacttgcataatctaatggttatcttttaaaaaaaaaatatc 23392421  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||| ||  |||||||||||||||||||||||  || | ||    
T  23392420 aaacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccttag-catcatttggggttaaacttaacatttaggat 23392322  T
Q  467 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||| ||||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  23392321 ttatttggcaaacggaggaaaaggtgagggacttaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaat 23392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 371 - 551
Target Start/End: Complemental strand, 29380391 - 29380214
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 470  Q
    |||| ||||||| | |||||||| | |||| | ||||| ||| |||| |||| ||||||||||||||   |||  |||||| |||||  | || ||||||    
T  29380391 ggttaaaattaacaaaattaataaggtctacgatggactacttttaaggttgatccaccatatacat---ttgaagttaaaattaacggtcgggatttat 29380295  T
Q  471 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||| ||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  29380294 ttggcaaacggaagaaaaggtgagggactaaaacgccatttttgttaattgtgggaccaaaatgaaaacaagaaattaaat 29380214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 298 - 538
Target Start/End: Original strand, 7311565 - 7311804
Alignment:
Q  298 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaa-agaaaaatcaaacggttgaaattaaaataattaatagga 396  Q
    |||||| |||| || |||||||||||||| |  | ||| |||||| ||| ||  |||||| | ||||||||||||||| |||||||||||||||||||||    
T  7311565 gtgttgatggttcaacgtaagataaaatacatctatgtgatccaacggtcctgctttaaacaaaaaaatcaaacggtttaaattaaaataattaatagga 7311664  T
Q  397 tctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaaggg 496  Q
    | ||||||||||||||||||| |||||| ||||||| ||||||||| || |||||||||||  |  | |||||||||| |||  ||  |||| |||||||    
T  7311665 tttatggtggaccactcttaaggttggttcaccatagacatcattt-ggattaaacttaactgtgaggatttatttggcaaatagataaaaaagtaaggg 7311763  T
Q  497 actaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    || |||| |  |  |||||||||||||||| |||||||||||    
T  7311764 accaaaa-ggtacgtttattaattgtgggatcaaaatgaaaa 7311804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 269 - 457
Target Start/End: Complemental strand, 11723090 - 11722903
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || ||||||| |||||| || ||||||||||||||   ||| |||||||| ||||||||    
T  11723090 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagagaaaatacacctgtgtaatccaatgaccctccttttaaaaaaaaaatca 11722991  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||| |||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||  || ||||||||| |||||    
T  11722990 aacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat--ttgggggttaaagttaac 11722903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 371 - 551
Target Start/End: Original strand, 23397270 - 23397447
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 470  Q
    |||| ||||||| | |||||||| | | || ||||||| ||| |||| |||||||||||||| ||||   |||  |||||| |||||  | || ||||||    
T  23397270 ggttaaaattaacaaaattaataaggtatacggtggactacttttaaggttggtccaccatagacat---ttgaagttaaatttaacggtcgggatttat 23397366  T
Q  471 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  23397367 ttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaat 23397447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 17839146 - 17839232
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17839146 atttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacaagaaattaaat 17839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 6701489 - 6701403
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  6701489 atttatttggcaaacggaggaaaatgtgagggactaaaataccatttttattaattgtgggaccaaaatgaaaatatgaaattaaat 6701403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 439 - 551
Target Start/End: Original strand, 6702852 - 6702963
Alignment:
Q  439 atttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||| ||||||||||||  |  | |||||||||| ||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  6702852 atttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgaggga-taaaacgccatttttattaattgtgggaccaaaatgaaaa 6702950  T
Q  539 taagaaattaaat 551  Q
    || ||||||||||    
T  6702951 tatgaaattaaat 6702963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 2687339 - 2687253
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| |||||||| | |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  2687339 atttatttggcaaacggaggaaaatgtgaaggactaaaacgccatttttattaattgtgggatcaaaatgaaaacatgaaattaaat 2687253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 399 - 551
Target Start/End: Original strand, 32506969 - 32507119
Alignment:
Q  399 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattg-gaatttatttggtaaacggaagaaaatgtaaggga 497  Q
    |||||| |||||||||||| |||||||||||||| | ||   |||||||||||||||||  |   | |||||||||| |||| ||  ||||||| |||||    
T  32506969 tatggtagaccactcttaaggttggtccaccatagatat---ttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgaggga 32507065  T
Q  498 ctaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||| ||||||||||||| ||||||| ||||||||||| | ||||||||||    
T  32507066 ctaaaacaccatttttattaaatgtgggatcaaaatgaaaacatgaaattaaat 32507119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 2687931 - 2688017
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| |||||||  |||| || ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  2687931 atttatttggcaaacggataaaaaggtgagggactaaaacgccatttttattaattgtgggactaaaatgaaaacatgaaattaaat 2688017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 29722772 - 29722686
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||  ||| ||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||    
T  29722772 atttatttgcaaaatggaggaaaatgtgagggactaaaacgccatttttattaattatgggatcaaaatgaaaacatgaaattaaat 29722686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 389 - 539
Target Start/End: Complemental strand, 12669906 - 12669758
Alignment:
Q  389 taataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgga-atttatttggtaaacggaagaaa 487  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |   |||||| ||||||| |||||  || || |||||||| | ||||||| ||||    
T  12669906 taatatgatctatggtggaccactcttaaggttggtccaccataca---catttgaggttaaagttaacagttagagatttatttagcaaacggaggaaa 12669810  T
Q  488 atgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaat 539  Q
    | || | ||||||||||   | |||||||||||||| ||||||||| |||||    
T  12669809 aagtgacggactaaaacttgagttttattaattgtgagaccaaaataaaaat 12669758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 269 - 437
Target Start/End: Complemental strand, 11967523 - 11967351
Alignment:
Q  269 agaagatgaagaaaaggaa--aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa--- 363  Q
    ||||||||||||||||| |  ||| | |||||||||| |||| || | | ||||||||| ||||||  ||||| ||||||  |||||| ||| ||||       
T  11967523 agaagatgaagaaaaggtacaaaaaaattaggtgttgatggtgcaccattagataaaat-gacttgcttaatcaaatggtcatctttttaaaaaaaatta 11967425  T
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||||| ||| |||||||||||||||||| |||||||| |||||| |||| || |||||||||| ||| ||||    
T  11967424 atcaaacagtttaaattaaaataattaatatgatctatgatggacccctctcaaggttggtccacaatagacat 11967351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 5186677 - 5186591
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| |||||  | | ||| ||||||| || |||||||||||||| |||||||||||||| | ||||||||||    
T  5186677 atttatttggcaaacggaggaaaagatgatggattaaaacgtcacttttattaattgtgtgaccaaaatgaaaacatgaaattaaat 5186591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 493 - 551
Target Start/End: Original strand, 12256619 - 12256677
Alignment:
Q  493 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| | ||||||||||    
T  12256619 agggactaaaacgctatttttattaattgtgcgaccaaaacgaaaacatgaaattaaat 12256677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 232405 - 232316
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || ||||||||||||||||| |||||||    
T  232405 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcctttaaaa 232316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 460 - 538
Target Start/End: Complemental strand, 232288 - 232212
Alignment:
Q  460 ttggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||| |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| |||||||||||||||||    
T  232288 ttgggatttatttggcaaacggaggaaaaagtgagggactaaaacg--tgttttattaattatgggaccaaaatgaaaa 232212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 1367642 - 1367567
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatg 344  Q
    |||||||||||||||||||| | | |||  |||||||||||||||| |||||| |||| || || || ||||||||    
T  1367642 agaagatgaagaaaaggaaacaaagttatatgttggtggtacatcgcaagatataatacacatgcgtgatccaatg 1367567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 548
Target Start/End: Original strand, 27082195 - 27082234
Alignment:
Q  509 tttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  27082195 tttttattaattgtgggaccaaaatgaaaattcgaaatta 27082234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 15730036 - 15730110
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacg-ccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||| | ||||||||||||| || |||||| |||| |    ||||||||||||||||||||||||||||||    
T  15730036 atttatttagcaaacggaagaaaaagtgagggaccaaaatgtatttttttattaattgtgggaccaaaatgaaaa 15730110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 548
Target Start/End: Original strand, 34024116 - 34024154
Alignment:
Q  510 ttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  34024116 ttttattaattgtgggaccaaaatgaaaatttgaaatta 34024154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 233454 - 233543
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | ||  |||||||||||||||| |||||||||||||||  ||| |||||||    
T  233454 agaagatgaagaaagagaaaattaattagatgttgttgattcactgtaagataaaatagacatgtgtaatccaatggccctcctttaaaa 233543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 233599 - 233644
Alignment:
Q  493 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||||||   |||||||||||| |||||||||||||||||    
T  233599 agggactaaaacgtgttttttattaattatgggaccaaaatgaaaa 233644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 6452393 - 6452320
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| | ||||||||| |||||    
T  6452393 atttatttggcaaacggaggaaaaagtgagggactaaaacgtaccttttattaattataggaccaaaacgaaaa 6452320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 6452518 - 6452591
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| |||||  | ||||||| |||||    ||||||||||| |||||||||||||||||    
T  6452518 atttatttggcaaacggaggaaaaaatgagggactcaaacgtacgttttattaattatgggaccaaaatgaaaa 6452591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 429
Target Start/End: Original strand, 7312923 - 7313016
Alignment:
Q  336 aatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    |||||||||||||||| ||  || ||||||||||| ||| ||||||||| ||||| ||    ||||||||||||||   ||| |||||||||||    
T  7312923 aatccaatggttctctatttgaacaaaaatcaaacagtttaaattaaaaaaattattaaagcctatggtggaccacatataatgttggtccacc 7313016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 9e-94; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 237 - 551
Target Start/End: Original strand, 13564020 - 13564332
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgta 336  Q
    ||||||||||||||||||||||||  ||| |  ||||||||||||| ||||||  ||| |||||||||| ||||||| |||| |||||||||| ||| ||    
T  13564020 tgtgagttgaagatgatgaagattattaaaggggaagatgaagaaagggaaaataatt-aggtgttggtagtacatcataagctaaaatagacatgtcta 13564118  T
Q  337 atccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatataca 436  Q
    |||||||||||||||||| ||| || |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | || ||||||||| |||    
T  13564119 atccaatggttctctttttaaaaaataatctaacggttcaaattaaaataattaataggatctatggtggaccactcttaaggatgatccaccatagaca 13564218  T
Q  437 tcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaa 536  Q
    | |||||||||||||||||| | | || |||||||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  13564219 ttatttggggttaaacttaa-cgtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaatgaa 13564317  T
Q  537 aataagaaattaaat 551  Q
    || ||||||||||||    
T  13564318 aacaagaaattaaat 13564332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 270 - 548
Target Start/End: Complemental strand, 32255290 - 32255015
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 369  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| || ||||||||||    
T  32255290 gaagatgaagaaaaggaaaaaa--ttaggtgttggtggtacatcgtaagattaaatagacctgtctaatccaatggttatcttttacaa-aaaaatcaaa 32255194  T
Q  370 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattta 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | || |||||    
T  32255193 cggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaaccgtcgggattta 32255094  T
Q  470 tttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||| ||||||| ||||| || |||||  |||| |    ||||||||||| |||||||||||| |||||  |||||||    
T  32255093 tttggcaaacggaggaaaaagtgagggatcaaaatgtacgttttattaattatgggaccaaaataaaaatttgaaatta 32255015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 268 - 551
Target Start/End: Complemental strand, 22537862 - 22537582
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    |||||||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||| ||  |||||||||||||| |||||||||  |||||||    
T  22537862 tagaagatgaagaaaatgaaaaaaaattaggtgttggtggttcatcgtaagataaaatagacctgcataatccaatggttcccttttaaaa--aaaatca 22537765  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||| |||||| |||| || |||||||||| ||||||| |||||  |||| |||    
T  22537764 aacggtttaaattaaaataattaataggatctatggtggatcactattaaggttggttcaccgtaaacatcatttgaggttaaaattaacagttgg-att 22537666  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||| |||| ||   ||| || |||||  |||| | |||||||| |||||||||||||||||||||||||  |||||||||    
T  22537665 tatttggcaaacagagacaaacgtgagggatcaaaatgtcatttttagtaattgtgggaccaaaatgaaaatataaaattaaat 22537582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 277 - 551
Target Start/End: Complemental strand, 22336274 - 22336002
Alignment:
Q  277 aagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttga 376  Q
    ||||||||||||   | |||||||||| ||||  |  |||||||||||||||||||   |||| ||||||| |||||| ||| ||| ||||| |||||||    
T  22336274 aagaaaaggaaattaaattaggtgttgttggtttacagtaagataaaatagacttgcacaatctaatggttatctttttaaaaaaatatcaa-cggttga 22336176  T
Q  377 aattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggta 476  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||||||||  |||||||||||||||||||||||  | || |||||||||| |    
T  22336175 aattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatag-catcatttggggttaaacttaacattcgggatttatttggca 22336077  T
Q  477 aacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||| || ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  22336076 aactgaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaat 22336002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 268 - 548
Target Start/End: Original strand, 11502235 - 11502512
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    |||||||||||||||||||||||   | |||||||||| |||||| ||||||||||||| || ||  |||||||||||||||||||| |||  |||||||    
T  11502235 tagaagatgaagaaaaggaaaaaa--tcaggtgttggtcgtacat-gtaagataaaataaacctgcctaatccaatggttctctttttaaaagaaaatca 11502331  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||| |||||||||||||  |||| |||    
T  11502332 aacggctgaaattaaaataattactaggatctatggtggaccactcttaaggttggtctaccatagacatcatttgaggttaaacttaactgttgggatt 11502431  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||| |||| ||  ||||  | |||||||||  ||| ||||||||||| ||||||| ||||||||||| | |||||||    
T  11502432 tatttggcaaacagagcaaaagttgagggactaattcgcaatttttattaaatgtgggatcaaaatgaaaacatgaaatta 11502512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 270 - 538
Target Start/End: Original strand, 43460636 - 43460903
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 369  Q
    ||||||||||||||||||||| | ||| |||||| |||| ||  ||||||||||||| || |  || ||  || ||| |||  || ||  ||| ||||||    
T  43460636 gaagatgaagaaaaggaaaaaaagttaagtgttgatggttcaatgtaagataaaatatacctacgtgatttaacggtcctccatttaataaaagatcaaa 43460735  T
Q  370 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattta 469  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||  |  | |||||    
T  43460736 gggtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagacataattt-gagttaaacttaactgtgaggattta 43460834  T
Q  470 tttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||| ||| ||| ||||| || ||||||||||| |    |||||||||||||||||||||||||||||    
T  43460835 tttggcaaatggaggaaaaagtgagggactaaaatgtacgttttattaattgtgggaccaaaatgaaaa 43460903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 268 - 457
Target Start/End: Complemental strand, 46835980 - 46835791
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt-aaaagaaaaatc 366  Q
    ||||||||||| |||||| |||| ||| || |||||||||||||||||| |||||||||||||||| |||| ||||  ||||||||| |||| ||||||     
T  46835980 tagaagatgaataaaagggaaaaaattaag-tgttggtggtacatcgtatgataaaatagacttgtctaatacaataattctcttttaaaaataaaaatt 46835882  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    || | ||| |||||||||||||||||||||| |||||| |||||   ||||   || ||||||||| ||||||||||||||||||||||||    
T  46835881 aatcagtttaaattaaaataattaataggatatatggtagaccaactttaagaatgatccaccataaacatcatttggggttaaacttaac 46835791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 308 - 437
Target Start/End: Complemental strand, 44372994 - 44372864
Alignment:
Q  308 tacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtgg 406  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  44372994 tacatcctaagataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtgg 44372895  T
Q  407 accactcttaaagttggtccaccatatacat 437  Q
    ||||||||||| ||| |||||| ||| ||||    
T  44372894 accactcttaatgttagtccactatagacat 44372864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 308 - 437
Target Start/End: Complemental strand, 44381850 - 44381720
Alignment:
Q  308 tacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtgg 406  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  44381850 tacatcctaagataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtgg 44381751  T
Q  407 accactcttaaagttggtccaccatatacat 437  Q
    ||||||||||| ||| |||||| ||| ||||    
T  44381750 accactcttaatgttagtccactatagacat 44381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 269 - 538
Target Start/End: Original strand, 47060288 - 47060555
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    ||||||| |||||| ||| ||| | |||||||||| ||  ||| | |||||||||||| ||||||||||| |||||||  || |||||||| | ||||||    
T  47060288 agaagataaagaaagggagaaataattaggtgttgttgacacaccataagataaaatacacttgtgtaattcaatggtcatccttttaaaaaacaaatca 47060387  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    |||| || || || ||| | |||||| | |||||||||||| | |||||| ||||||||||||||||   ||||||| ||||||||||||  |  | |||    
T  47060388 aacgattaaattttaaaaatttaataaggtctatggtggactattcttaaggttggtccaccatata---catttggtgttaaacttaacagtccggatt 47060484  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||| |||||||| |||  || |||||| ||||||    ||||||||||| | |||||||||||||||    
T  47060485 tatttggcaaacggaaaaaagggtgagggaccaaaacgtacgttttattaattataggaccaaaatgaaaa 47060555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 551
Target Start/End: Complemental strand, 13562950 - 13562845
Alignment:
Q  446 gttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaa 545  Q
    |||||| ||||| || || ||||||||||||||| ||  ||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  13562950 gttaaagttaacaatcgggatttatttggtaaacagagaaaaatgtgagggactaaaacgccatttttattacttgtgggaccaaaataaaaacaagaaa 13562851  T
Q  546 ttaaat 551  Q
    ||||||    
T  13562850 ttaaat 13562845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 364 - 489
Target Start/End: Complemental strand, 40811529 - 40811405
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    ||||||||||| |||||||||  |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||| |  |    
T  40811529 atcaaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccatagacatcattt-gggttaaagttaaccgtcag 40811431  T
Q  464 aatttatttggtaaacggaagaaaat 489  Q
     |||||||| ||| ||||| ||||||    
T  40811430 gatttatttagtatacggaggaaaat 40811405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 43441605 - 43441481
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| ||||| |||||||||| ||  || ||||||| ||| ||||||| ||| | |||||||||||||||||||  ||||||||||||||    
T  43441605 cgtaagataaaatacacttgcgtaatccaatagtcatcctttaaaaaaaatatcaaacagtttacattaaaataattaataggacttatggtggaccact 43441506  T
Q  413 cttaaagttggtccaccatatacat 437  Q
    ||||| |||||| ||||||| ||||    
T  43441505 cttaaggttggtacaccatagacat 43441481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 364 - 548
Target Start/End: Complemental strand, 3413740 - 3413558
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatt-g 462  Q
    ||||||||||| ||||| ||| |||||||    |||||||||||| ||||||||  ||| ||||||||| |||||   ||  ||||||||||||  || |    
T  3413740 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatccaccatagacatc---tgaagttaaacttaacagttag 3413644  T
Q  463 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    | |||||||||| |||| ||  |||| || |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||    
T  3413643 ggatttatttggcaaacagagtaaaaggtgagggactaaaacgccatttttattaattgtaggaccaaaatgaaaacacgaaatta 3413558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 351 - 430
Target Start/End: Complemental strand, 35295920 - 35295841
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 430  Q
    |||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35295920 ttttaaaatatagatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacca 35295841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 314 - 437
Target Start/End: Complemental strand, 16756128 - 16756006
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactc 413  Q
    ||||||||||||| ||||| |||||| |||||| ||| ||| ||| |||||||||| |||| ||||||||||||||||||||||||||||| ||| |||     
T  16756128 gtaagataaaatacacttgcgtaatctaatggtcctccttttaaa-aaaaatcaaatggttaaaattaaaataattaataggatctatggtagacaactt 16756030  T
Q  414 ttaaagttggtccaccatatacat 437  Q
    |||| |||| | ||||||| ||||    
T  16756029 ttaaggttgtttcaccatagacat 16756006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 360 - 457
Target Start/End: Complemental strand, 39981529 - 39981434
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||||||| | ||||||||||||||||||| ||||  || ||||||||| |||||    
T  39981529 aaaaatcaaacggtttaaattagaataattaattggatctatggtggaccatttttaaagttggtccaccatagacat--ttgggggttaaagttaac 39981434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 457
Target Start/End: Complemental strand, 41328478 - 41328336
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| |  || ||||||||| |   ||| ||| ||| ||| ||||||||||| |||||| |||||||||||||||||||||||||||| |    
T  41328478 cgtaagataaaatacatatgcgtaatccaacgaccctccttttaaaaaaatatcaaacggtttaaattagaataattaataggatctatggtggaccatt 41328379  T
Q  413 cttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
     ||||||||| ||||||||| ||||  || ||||||||| |||||    
T  41328378 tttaaagttgttccaccatagacat--ttgggggttaaagttaac 41328336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 439 - 551
Target Start/End: Original strand, 22538829 - 22538941
Alignment:
Q  439 atttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||| |||||| |||||| | |  |||||||||| ||||||| |||||  | ||||||||||||| |||||||||||||||||||||||||| |||||    
T  22538829 atttggagttaaagttaaccgtcgagatttatttggcaaacggaggaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaaagaaaa 22538928  T
Q  539 taagaaattaaat 551  Q
     | ||||||||||    
T  22538929 catgaaattaaat 22538941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 397 - 538
Target Start/End: Original strand, 40509675 - 40509814
Alignment:
Q  397 tctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgga--atttatttggtaaacggaagaaaatgtaag 494  Q
    ||||||||||||||||||||| |||||||||| ||| ||||   ||||||||||||||||| |  | |  |||||||||||||||||| ||||| || ||    
T  40509675 tctatggtggaccactcttaaggttggtccactatagacat---ttggggttaaacttaac-accgaatgatttatttggtaaacggaggaaaaagtgag 40509770  T
Q  495 ggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    | ||| |||||    |||||||||||||||||||||||||||||    
T  40509771 gaacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 40509814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 365 - 457
Target Start/End: Complemental strand, 46201338 - 46201249
Alignment:
Q  365 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    |||||| ||| | |||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |   ||||||||||||||||||||    
T  46201338 tcaaacagtttatattaaaataattaatatgatctatggtggaccactcttaaggttggttcaccataga---catttggggttaaacttaac 46201249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 438 - 551
Target Start/End: Complemental strand, 24844397 - 24844284
Alignment:
Q  438 catttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 537  Q
    |||||| |||||||||||||  |  | |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| | || ||||| |||    
T  24844397 catttgaggttaaacttaacagtgaggatttatttggcaaacggaagaaaatgtgagggactaaaacgccatttgtattaattgtagaacaaaaataaaa 24844298  T
Q  538 ataagaaattaaat 551  Q
    | |  |||||||||    
T  24844297 acataaaattaaat 24844284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 316 - 437
Target Start/End: Original strand, 30334503 - 30334622
Alignment:
Q  316 aagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactctt 415  Q
    |||||||||||||| || |||||||||  || ||| || |||| ||||||| ||||||| ||||||||| |||||||||||||||||||||||   ||||    
T  30334503 aagataaaatagacatgggtaatccaagcgtcctccttaaaaa-aaaaatctaacggtttaaattaaaa-aattaataggatctatggtggactgttctt 30334600  T
Q  416 aaagttggtccaccatatacat 437  Q
    ||||||||||| ||||| ||||    
T  30334601 aaagttggtcctccatagacat 30334622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 407 - 549
Target Start/End: Complemental strand, 11501344 - 11501205
Alignment:
Q  407 accactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgc 506  Q
    |||||| |||| |||||||||||||| ||||   |||  |||||| |||||  | || |||||||||| ||| ||| ||||| || ||||||||||| ||    
T  11501344 accacttttaaggttggtccaccatagacat---ttgaagttaaagttaacagtcgggatttatttggcaaatggaggaaaaggtgagggactaaaatgc 11501248  T
Q  507 catttttattaattgtgggaccaaaatgaaaataagaaattaa 549  Q
     ||||||||||| ||||||||||||||||||| | ||||||||    
T  11501247 tatttttattaactgtgggaccaaaatgaaaacatgaaattaa 11501205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 3414841 - 3414924
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||| ||| ||| ||||| || | |||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  3414841 atttatttggcaaatggaggaaaaagtgaaggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaatta 3414924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 397 - 538
Target Start/End: Original strand, 22115105 - 22115244
Alignment:
Q  397 tctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgga--atttatttggtaaacggaagaaaatgtaag 494  Q
    ||||||||||||||||||||| |||||||||| ||| |   ||||||||||||||||||| ||  | |  ||||||||||| |||||| ||||| || ||    
T  22115105 tctatggtggaccactcttaaggttggtccactataga---catttggggttaaacttaa-caccgaangatttatttggtnaacggaggaaaaagtgag 22115200  T
Q  495 ggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    | ||| |||||    |||||||||||||||||||||||||||||    
T  22115201 gaacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 22115244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 22337378 - 22337463
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| |||||||||||||||| ||  |||||||||||||||||||||| ||||||||||| | |||| |||||    
T  22337378 atttatttggcaaacggaggaaaatgtaagggactgaat-gccatttttattaattgtgggatcaaaatgaaaacatgaaactaaat 22337463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 457
Target Start/End: Complemental strand, 25533523 - 25533306
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaaga---aaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgt 333  Q
    ||||||||||||||||||||||||  ||||||||||||||||||   ||||| |||| | |||   |||| |||||||  ||||| || ||||||| ||     
T  25533523 tgtgagttgaagatgatgaagattagtaaggtagaagatgaagaaagaaagggaaaaaaatta---gttgttggtacacggtaagttataatagacatgc 25533427  T
Q  334 gtaatccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
     ||||| ||||||  || |||||||| | | ||||||||||| ||||| ||| | |||||| | ||||| ||||||||| ||||||||| || ||| |||    
T  25533426 ataatcaaatggtcatctttttaaaaaatatatcaaacggtttaaatt-aaagatttaataaggtctatagtggaccacccttaaagttagttcactata 25533328  T
Q  433 tacatcatttggggttaaacttaac 457  Q
       | ||||||||||||||||||||    
T  25533327 ---agcatttggggttaaacttaac 25533306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 669297 - 669369
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  669297 atcaaacggtttaaattaacaaaattaataggatctatggtggaccactctt-aagatggtccaccatagacat 669369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 314 - 538
Target Start/End: Complemental strand, 47059371 - 47059144
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaa--aaatcaaacggttgaaatt--aaaataattaataggatctatggtggacc 409  Q
    ||||||||||||| || || |||||||||||||  || ||| ||| ||  | ||||||||||| |||||  |||| |||||||| | |||||||||| |     
T  47059371 gtaagataaaatacacatgcgtaatccaatggtcatccttttaaataaacagatcaaacggtttaaattaaaaaaaaattaataaggtctatggtgggct 47059272  T
Q  410 actcttaaagttggtccaccatatacatcatttg-gggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgcca 508  Q
    |||||||| |||| ||||||||| || |  || | ||||||||||||||  |  | |||||||||| ||||||| ||||| || |||||  ||||||       
T  47059271 actcttaaggttgctccaccatagactt--ttggagggttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgagggatcaaaacgtac 47059174  T
Q  509 tttttattaattgtgggaccaaaatgaaaa 538  Q
     ||||||||||||| |||||||||||||||    
T  47059173 attttattaattgtaggaccaaaatgaaaa 47059144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 2414957 - 2414890
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtcca 427  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||||||| |||| |||||||||    
T  2414957 aaaattcaaacggtttaaattaagaaaattaataggatctatggtggaccacttttaaggttggtcca 2414890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 399 - 538
Target Start/End: Complemental strand, 41078930 - 41078792
Alignment:
Q  399 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggac 498  Q
    |||||||||||| | ||||  ||||||||||||||||||||||| |||||||| |||||| | || ||||||| || ||| ||| |||||| ||| |||     
T  41078930 tatggtggaccatttttaagattggtccaccatatacatcattt-gggttaaagttaaccgtcgggatttattcggcaaatggaggaaaatctaaaggat 41078832  T
Q  499 taaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     ||||     ||||||| ||||||||||||||||||||||    
T  41078831 caaaagatactttttatcaattgtgggaccaaaatgaaaa 41078792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 313 - 410
Target Start/End: Complemental strand, 48312300 - 48312202
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||| || |||||||||||||  | ||||||||| |||| |||||||  || ||||||||| |||||||||||||||||||||||||    
T  48312300 cgtaagataaaatagacctgcgtaatccaatggtcatccttttaaaaaaaaagatcaaaccatttaaattaaaa-aattaataggatctatggtggacca 48312202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 349 - 537
Target Start/End: Complemental strand, 47454559 - 47454374
Alignment:
Q  349 tcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggtt 448  Q
    ||||| |||| ||||||||||||||| ||||||| | |||||||| | |||| | |||||||||||||| ||||||| |||||| |   ||||| | |||    
T  47454559 tctttaaaaaaaaaaatcaaacggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccataga---catttagagtt 47454463  T
Q  449 aaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 537  Q
    ||| ||||   | || |||||||||| ||||| |  ||||  | |||||| |||| |    ||||||||||||||||||||||||||||    
T  47454462 aaagttaatagtcgggatttatttggcaaacgaagaaaaacttgagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaa 47454374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 538
Target Start/End: Complemental strand, 40508586 - 40508414
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac-cattg 462  Q
    ||||||||||| ||||| ||| |||||||   ||||||||||||| ||||||||  ||| ||||||||| |   |||||||| ||||||||||| |        
T  40508586 atcaaacggttaaaatttaaaaaattaatgaaatctatggtggacaactcttaagattgatccaccataga---catttgggattaaacttaacaccgaa 40508490  T
Q  463 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    | ||||||||||  |||||| ||||| || ||||||| |||||    |||||||||||||||||| ||||||||||    
T  40508489 ggatttatttggctaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggacaaaaatgaaaa 40508414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 404 - 538
Target Start/End: Original strand, 32256344 - 32256475
Alignment:
Q  404 tggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaa 503  Q
    ||||||||| |||| |||||||||||||| ||||   |||  |||||| |||||  ||||||||||||||| ||| ||| ||||| || |||||| ||||    
T  32256344 tggaccacttttaatgttggtccaccatagacat---ttgaagttaaagttaacggttggaatttatttggcaaatggaggaaaaagtgagggaccaaaa 32256440  T
Q  504 cgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     |    ||||||||||| |||||||||||||||||    
T  32256441 ggtacattttattaattatgggaccaaaatgaaaa 32256475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 24282983 - 24283065
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||| ||||||| |||||||| |||||||||| ||||  |||| |||||||||| ||||||||||||||  |||||||    
T  24282983 atttatttggcaaacggaggaaaatgtgagggactaaagcgcctgtttt-ttaattgtggaaccaaaatgaaaatctgaaatta 24283065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 43459564 - 43459491
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| |||||  | ||||||| ||||||   |||||||||||||||||||||||||||||    
T  43459564 atttatttggcaaacggaggaaaacatgagggacttaaacgcacgttttattaattgtgggaccaaaatgaaaa 43459491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 4167672 - 4167609
Alignment:
Q  348 ctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    ||||||||||  |||||||||| |||||||||| ||| | |||||| |||||||||||||||||    
T  4167672 ctcttttaaagaaaaaatcaaaaggttgaaatttaaaaatttaataagatctatggtggaccac 4167609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 364 - 538
Target Start/End: Original strand, 4299956 - 4300128
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    ||||||||||  ||||| ||| |||||||    |||||||||| |||||||||| |||| ||||| ||| || |   ||||||||||||||||| |  |     
T  4299956 atcaaacggtcaaaatttaaaaaattaatgaagtctatggtgggccactcttaaggttgatccactatagacgt---ttggggttaaacttaac-accga 4300051  T
Q  464 aa--tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||  ||||||||| |||| || ||||| || ||||||| |||||    |||||||||||||||||||||||||||||    
T  4300052 aagatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 4300128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 379 - 437
Target Start/End: Complemental strand, 15992328 - 15992270
Alignment:
Q  379 ttaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||||||||||||||||||| ||||  | ||||||||| |||||||||||||| ||||    
T  15992328 ttaaaataattaataggatctttggtaaatcactcttaaggttggtccaccatagacat 15992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 45454147 - 45454074
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| || ||||||||||||||    
T  45454147 atttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaa 45454074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 547
Target Start/End: Original strand, 40738845 - 40738928
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgcca-tttttattaattgtgggaccaaaatgaaaataagaaatt 547  Q
    |||||||||| |||| ||  |||| || |||||||||||||||  |||||||||||| |||||||||||| |||| | ||||||    
T  40738845 atttatttggcaaacagagcaaaaagtgagggactaaaacgcctgtttttattaattatgggaccaaaataaaaacatgaaatt 40738928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 549
Target Start/End: Original strand, 45455424 - 45455463
Alignment:
Q  510 ttttattaattgtgggaccaaaatgaaaataagaaattaa 549  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  45455424 ttttattaattgtgggaccaaaatgaaaatttgaaattaa 45455463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 47456276 - 47456359
Alignment:
Q  349 tcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||| |||| |||||||||||  || | ||||| | |||||||| | |||||| ||||||||| ||||||||| |||||||||    
T  47456276 tctttaaaaaaaaaaatcaaacaattaagattaatacaattaataaggtctatgatggaccacttttaaagttgttccaccata 47456359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 269 - 411
Target Start/End: Complemental strand, 26406425 - 26406283
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||| ||| | |||||||||| | || ||  ||| |||| || |||| | | | |||||| |||||||||||  || ||| |||||    
T  26406425 agaagatgaagaaatggagaaaaaattaggtgttgattgttcactgtatgatacaacagacatatatgatccaacggttctcttttttaaaaaatatcaa 26406326  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    | |||| ||||||||  |||| |||  ||||||||||||||||    
T  26406325 agggttaaaattaaatgaatttataatatctatggtggaccac 26406283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 548
Target Start/End: Original strand, 30311521 - 30311559
Alignment:
Q  510 ttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  30311521 ttttattaattgtgggaccaaaatgaaaatttgaaatta 30311559  T

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Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 549
Target Start/End: Original strand, 534084 - 534157
Alignment:
Q  476 aaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaa 549  Q
    ||||| || ||||| | |||||||||  | ||||||||||||| |||| |||||||||||||| | ||||||||    
T  534084 aaacgaaacaaaatttgagggactaattcaccatttttattaaatgtgagaccaaaatgaaaagatgaaattaa 534157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 549
Target Start/End: Complemental strand, 537412 - 537339
Alignment:
Q  476 aaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaa 549  Q
    ||||| || ||||| | |||||||||  | ||||||||||||| |||| |||||||||||||| | ||||||||    
T  537412 aaacgaaacaaaatttgagggactaattcaccatttttattaaatgtgagaccaaaatgaaaagatgaaattaa 537339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 32603042 - 32602969
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| |||||||  |||| || |||||||||||||    ||||||||||| |||||||||||| ||||    
T  32603042 atttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaa 32602969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 33779119 - 33779164
Alignment:
Q  493 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||||||  | |||||||||||||||| ||||||||||||    
T  33779119 agggactaaaacgtgagttttattaattgtggggccaaaatgaaaa 33779164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 47456382 - 47456455
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| |||| ||||||||  | |||||| |||| |    |||||||||||||||||||||||||||||    
T  47456382 atttatttggcaaacagaagaaaaaatgagggaccaaaaagtacgttttattaattgtgggaccaaaatgaaaa 47456455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 3e-90; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 268 - 551
Target Start/End: Complemental strand, 30911048 - 30910764
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttag-gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatc 366  Q
    ||||||||||||||||||||||| |   |  |||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||  |||| ||    
T  30911048 tagaagatgaagaaaaggaaaaaaagaaaatgtgttggtggtacatcgtaagataaaatagacatgcctaattcaatggttctcttttaaagaaaaactc 30910949  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||| |||||  | |  ||    
T  30910948 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccaaagacatcatttggtgttaaagttaacagtcgagat 30910849  T
Q  467 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  30910848 ttatttggtaaacagaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 30910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 268 - 538
Target Start/End: Original strand, 30858982 - 30859252
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaaga-aaaatc 366  Q
    ||||||||||||||||||||||| ||| |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| ||| | ||||||    
T  30858982 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtatattgtaagataaaatagacttgtctaatccaatggttctctttttaaaaagaaaatc 30859080  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 466  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||  |    |     
T  30859081 aaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaagac 30859180  T
Q  467 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||| |||| || |||||||| ||||||| |||||    |||||||||||||||||||||||||||||    
T  30859181 ttatttggcaaacagaggaaaatgtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 30859252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 268 - 538
Target Start/End: Complemental strand, 22048038 - 22047768
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt--aaaagaaaaat 365  Q
    |||||||||||||||||||||||   |||||||||| |||||||| |||||||||||||||| | | |||| |||||||||||||||  |||| ||||||    
T  22048038 tagaagatgaagaaaaggaaaaaa--ttaggtgttgatggtacattgtaagataaaatagacctttctaattcaatggttctcttttcaaaaaaaaaaat 22047941  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaa 465  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||| ||||||||| | ||||||||||||     | |    
T  22047940 caaacggtttaaattaaaataattcataggatttatggtggaccactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccagga 22047841  T
Q  466 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||||| ||||||| |||||  | |||||| ||||||    |||||||||||||||||||||||||||||    
T  22047840 tttatttggcaaacggaggaaaaaatgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaa 22047768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 267 - 538
Target Start/End: Complemental strand, 39604158 - 39603889
Alignment:
Q  267 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttta---aaagaaaa 363  Q
    |||||||||||||||||| |||||   | |||||||||||||||||| || ||||| |||||||||   | |  |||| || ||||||    ||| ||||    
T  39604158 gtagaagatgaagaaaagaaaaaa---tcaggtgttggtggtacatcatatgataagatagacttgctgatt--aatgattatcttttttttaaaaaaaa 39604064  T
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| |||| |||| ||||||| |||||| ||||||||||||||||||||||||  |       
T  39604063 atcaaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaacagtcat 39603964  T
Q  464 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     |||||||||| ||||||| |||||| | |||||| ||||||    ||||||||||||||||| |||||||||||    
T  39603963 gatttatttggcaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaa 39603889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 270 - 432
Target Start/End: Original strand, 36898791 - 36898957
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttta----aaagaaaaat 365  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| || |||||||||||||  |||||||    ||| ||||||    
T  36898791 gaagatgaagaaaagaaaaaaaaattaggtgttggtggtacatcgtaagataaaatagacatgcgtaatccaatggtcatcttttagaagaaaaaaaaat 36898890  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||| |||| ||| |||||||||||| || ||||||||||||| ||| |||| ||||| ||||||||    
T  36898891 caaagggtttaaactaaaataattaacagaatctatggtggactacttttaaggttgggccaccata 36898957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 294 - 548
Target Start/End: Original strand, 22308636 - 22308889
Alignment:
Q  294 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaat 392  Q
    |||||||||| ||||||| ||||||  | ||||||| ||  ||||||||||||  |||||| ||| || | |||||| |||| | ||||||| | |||||    
T  22308636 ttaggtgttgttggtacaccgtaagtaacaatagacatgcataatccaatggtcatctttttaaaaaacagatcaaatggtttacattaaaaaatttaat 22308735  T
Q  393 aggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccat--tggaatttatttggtaaacggaagaaaatg 490  Q
    |   ||||||||||||||||||||| || ||||||||||| ||||   ||||||||||||||||| |   |||| ||||||||| |||||||  ||||||    
T  22308736 aatgtctatggtggaccactcttaaggtaggtccaccatagacat---ttggggttaaacttaacaaccatgga-tttatttggcaaacggagcaaaatg 22308831  T
Q  491 taagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    | |||||||||||||||  ||||||||||| ||||||||||||||||| | |||||||    
T  22308832 tgagggactaaaacgcctgttttattaattatgggaccaaaatgaaaacatgaaatta 22308889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 268 - 457
Target Start/End: Complemental strand, 11262705 - 11262509
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt---------aaaa 358  Q
    ||||||||||||||||||||||| ||| ||||||||||||||  | |||||||||||||||| ||| |||||||||  |||| ||||         ||||    
T  11262705 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtatgtagtaagataaaatagacctgtctaatccaatcattctttttttttttttttaaaa 11262607  T
Q  359 gaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
     ||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||| || |||||    
T  11262606 aaaagatcaaatggtttaaattataataattaataggatctatggtggaccactcttaaggttggtccaccata-gcatgatttggggttgaagttaac 11262509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 313 - 457
Target Start/End: Complemental strand, 1102877 - 1102736
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| |||||  ||||||| ||||  || ||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  1102877 cgtaagataaaatacacttgcataatccactggtcatcatttaaaaaaaagatcaaacggtttaaattaaaataattaataagatctatggtggaccact 1102778  T
Q  413 cttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||| ||||||| |||||| |   |||||||||||||| |||||    
T  1102777 cttaaggttggtctaccataga---catttggggttaaagttaac 1102736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 269 - 437
Target Start/End: Original strand, 9220270 - 9220441
Alignment:
Q  269 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||| ||| ||| | ||||||||||||  ||||||||| | |||||||||| |||||||||||| |||  ||||||||  |||||||||    
T  9220270 agaagatgaagaaaatgaataaaaagttaggtgttggtaatacatcgtatggtaaaatagacatgtgtaatccaacggtcgtcttttaag-gaaaaatca 9220368  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccac---tcttaaagttggtccaccatatacat 437  Q
    ||||||| |||||||||||||||||| ||| ||||| |||||||   |||||| |||||||||||||| ||||    
T  9220369 aacggtttaaattaaaataattaataagatttatgggggaccactcttcttaatgttggtccaccatagacat 9220441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 377 - 551
Target Start/End: Original strand, 30912084 - 30912255
Alignment:
Q  377 aattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggta 476  Q
    |||||| | |||||||| | |||||| || |||||| |||| |||||||||||||| | ||   |||| |||||| |||||  |||| |||||||||| |    
T  30912084 aattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatat---ttggagttaaagttaacacttgggatttatttggca 30912180  T
Q  477 aacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||  |||| || |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  30912181 aacggagaaaaaggtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaat 30912255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 364 - 538
Target Start/End: Original strand, 27705223 - 27705396
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||  ||||| |||||  |  |    
T  27705223 atcaaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctg 27705321  T
Q  464 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     |||||||||| ||| ||| |||||| | |||||| ||||||    |||||||||||||  ||||||||||||||    
T  27705322 tatttatttggcaaaaggaggaaaatctgagggaccaaaacgtacgttttattaattgtatgaccaaaatgaaaa 27705396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 364 - 551
Target Start/End: Original strand, 33173867 - 33174053
Alignment:
Q  364 atcaaacggttgaaatt-aaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac--cat 460  Q
    ||||||||||| ||||| |||| |||||||    |||||||| |||||||||||| |||||||||||||| ||||   |||||||||||||||||  |      
T  33173867 atcaaacggttaaaatttaaaaaaattaatgaagtctatggtagaccactcttaaggttggtccaccatagacat---ttggggttaaacttaacagcca 33173963  T
Q  461 tggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
     ||| ||||||||| |||| || ||||| || |||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||    
T  33173964 agga-tttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaaatgtgggatcaaaatgaaaacatgaaattaaat 33174053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 298 - 417
Target Start/End: Original strand, 4127089 - 4127214
Alignment:
Q  298 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt------aaaagaaaaatcaaacggttgaaattaaaataattaa 391  Q
    |||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||      |||| |||||||||| |||| |||||||| |||||||    
T  4127089 gtgttggtggtacatcataagataaaatagacctgtgcaatctaatggttctcttttacaaaaaaaataaaaatcaaatggtttaaattaaattaattaa 4127188  T
Q  392 taggatctatggtggaccactcttaa 417  Q
     |||||||||||||||||||| ||||    
T  4127189 caggatctatggtggaccacttttaa 4127214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 335 - 457
Target Start/End: Complemental strand, 15548478 - 15548354
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaat----aggatctatggtggaccactcttaaagttggtccacca 430  Q
    ||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||    ||||| ||||||||| || |||||| ||||||||||||    
T  15548478 taatccaatggttctcttttaaaa--aaaatcaaatggtttaaattaaaataattaattaataggatttatggtggatcattcttaaggttggtccacca 15548381  T
Q  431 tatacatcatttggggttaaacttaac 457  Q
     | ||||||||| ||||||||||||||    
T  15548380 gagacatcatttagggttaaacttaac 15548354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 298 - 421
Target Start/End: Original strand, 13520640 - 13520764
Alignment:
Q  298 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaaaatcaaacggttgaaattaaaataattaatagga 396  Q
    ||||||||| |||||| ||||||||||||||| |  ||||||||| ||||||||||| | || ||||||| ||| ||| |||| ||| ||||||||||||    
T  13520640 gtgttggtgatacatcataagataaaatagaccttcgtaatccaacggttctctttttataaaaaaaatccaacagtttaaatcaaattaattaatagga 13520739  T
Q  397 tctatggtggaccactcttaaagtt 421  Q
    ||||||||| |||||||||||||||    
T  13520740 tctatggtgaaccactcttaaagtt 13520764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 364 - 538
Target Start/End: Complemental strand, 8521461 - 8521291
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||| |   |||||||||||||| |||||| | ||    
T  8521461 atcaaagggttgaaattaaa-taattaataggatctatggtggaccattcttaaggttggtccaccataca---catttggggttaaagttaaccgtcgg 8521366  T
Q  464 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     |||||||||    |||||   ||| || |||||| |||||   | |||||||| || |||||||||||||||||    
T  8521365 gatttatttgactgacggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaa 8521291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 364 - 473
Target Start/End: Original strand, 1010274 - 1010379
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |   |||||||||||||| |||||| | ||    
T  1010274 atcaaagggttgaaattaaa-taattaataggatctatggcggaccactcttaaggttggtccaccataca---catttggggttaaagttaaccgtcgg 1010369  T
Q  464 aatttatttg 473  Q
     |||||||||    
T  1010370 gatttatttg 1010379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 432
Target Start/End: Complemental strand, 10736018 - 10735903
Alignment:
Q  317 agataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactctta 416  Q
    |||||||||| || || |||||| |||||| || |||||||| |  ||||| |||||| |||||||||||||||||| ||||||||||||||  || |||    
T  10736018 agataaaatacacctgcgtaatcaaatggtccttttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 10735919  T
Q  417 aagttggtccaccata 432  Q
    | ||||||||||||||    
T  10735918 acgttggtccaccata 10735903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 313 - 538
Target Start/End: Original strand, 325041 - 325265
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttt--taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||| ||||||||||| | ||||||  || | ||||  | ||| ||| ||||||||||| ||||||| | |||||||| | |||| | |||||||    
T  325041 cgtaagatataatagacttgtatgatccaacagtccactttctttaaaaaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggacca 325140  T
Q  411 ctcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatt 510  Q
    || |||| |||||||||||||| |   ||||| | |||||| |||||  | || |||||||||| ||||||| |||||  | |||||| |||| |    |    
T  325141 ctattaaggttggtccaccataga---catttagagttaaagttaacagtcgggatttatttggcaaacggaggaaaacttgagggaccaaaaggtacgt 325237  T
Q  511 tttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||||||||||||||||||||||||    
T  325238 tttattaattgtgggaccaaaatgaaaa 325265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 1009399 - 1009325
Alignment:
Q  357 aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| |||||| | |||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1009399 aagaaagatcaaaggattgagattaaa-taattaataggatctatggtggaccactcttaaggttggtccaccata 1009325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 324251 - 324174
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||||||||||||| | |||||   |||||||| | |||||| ||||||||| ||||||||||||||||||| ||||    
T  324251 aaaaatcaaacggttaagattaacgcaattaataaggtctatgatggaccactattaaagttggtccaccatagacat 324174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 39605476 - 39605549
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| |||||| | |||||| ||||||    |||||||||||||||||||||||||||||    
T  39605476 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttttattaattgtgggaccaaaatgaaaa 39605549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 11797395 - 11797461
Alignment:
Q  319 ataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatcaaacggttgaaattaaaa 384  Q
    |||||||| || |||||||||||||||| ||||||||||| ||| |||| ||||||| |||||||||    
T  11797395 ataaaataaacatgtgtaatccaatggtcctcttttaaaaaaaataatctaacggttaaaattaaaa 11797461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 411
Target Start/End: Complemental strand, 223484 - 223384
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||| || ||||||||| ||||||  |||||  || ||| ||||||||||| ||||||||| | ||||||   |||||||| |||||    
T  223484 cgtaagataaaatagacatgagtaatccaaaggttctactttaaataaaaaagatcaaacggtttaaattaaaaaatttaataaagtctatggtagacca 223385  T
Q  411 c 411  Q
    |    
T  223384 c 223384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 538
Target Start/End: Original strand, 22049116 - 22049216
Alignment:
Q  438 catttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 537  Q
    ||||||||||||||||||||    || |||||||||  |||| || ||||| || |||||| ||||||    ||||||||||| ||||||||||||||||    
T  22049116 catttggggttaaacttaacagcagggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaa 22049215  T
Q  538 a 538  Q
    |    
T  22049216 a 22049216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 7426862 - 7426799
Alignment:
Q  348 ctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    ||||||||||  |||||||||| |||||||||| ||| | |||||| | |||||||||||||||    
T  7426862 ctcttttaaagaaaaaatcaaaaggttgaaatttaaaaatttaataaggtctatggtggaccac 7426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 343 - 401
Target Start/End: Original strand, 17420474 - 17420531
Alignment:
Q  343 tggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctat 401  Q
    ||||||||||| |||| |||||||||||  || ||||||||||||||||||||| ||||    
T  17420474 tggttctctttaaaaa-aaaaatcaaacaatttaaattaaaataattaataggacctat 17420531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 547
Target Start/End: Complemental strand, 22307617 - 22307535
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatt 547  Q
    |||||||||| |||| ||  |||| || |||||||||||| ||  ||||||||||| ||| ||||||||||||| | ||||||    
T  22307617 atttatttggcaaacagagcaaaaagtgagggactaaaacacctgttttattaattatggaaccaaaatgaaaacatgaaatt 22307535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 22048942 - 22049043
Alignment:
Q  264 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaa 362  Q
    |||| |||||||||||| | ||||||  | |||| || || |||| ||  |||||||||||||||| || ||||||||||| || |||||||| ||||||    
T  22048942 aaggaagaagatgaagagagggaaaataaattagctgatgttggttcactgtaagataaaatagacatgcgtaatccaatgattgtcttttaagaagaaa 22049041  T
Q  363 aa 364  Q
    ||    
T  22049042 aa 22049043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 160; Significance: 8e-85; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 268 - 551
Target Start/End: Complemental strand, 7707893 - 7707611
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||| ||||| ||  | |||||| ||||||||||||||||||||||||| ||  |||||||||||||||||||||||  ||||||||    
T  7707893 tagaagatgaagaaaagaaaaaaaata-atgtgttgatggtacatcgtaagataaaatagacctgcctaatccaatggttctcttttaaagaaaaaatca 7707795  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | ||||||||||| ||||||  ||||| |  | |||    
T  7707794 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaaccgtcaggatt 7707695  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||| |||| || |||||||| | ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||    
T  7707694 tatttggcaaacagaggaaaatgtgatggactaaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 7707611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 267 - 534
Target Start/End: Original strand, 2312295 - 2312558
Alignment:
Q  267 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatc 366  Q
    |||||||||||||||| | |||||   |||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||||| ||| |||||||    
T  2312295 gtagaagatgaagaaaggaaaaaa---ttaggtgttggtggtacatcataagataaaataggcctgtctaatccaatggttctctttttaaa-aaaaatc 2312390  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 466  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||  |    ||    
T  2312391 aaacagtttaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacggtcatgat 2312490  T
Q  467 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatg 534  Q
    |||||||| ||||||| ||||| || ||||||| |||||    |||||||||||||||||| ||||||    
T  2312491 ttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggactaaaatg 2312558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 268 - 551
Target Start/End: Complemental strand, 23202150 - 23201869
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaa--aaat 365  Q
    ||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||| ||  |||| |||||||||||||||         ||||    
T  23202150 tagaagatgaagaaaagaaaaaa---ttaggtgttggtggtacatcgtaagataaaatagacctgcttaattcaatggttctctttttttttttttaaat 23202054  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaa 465  Q
    |||||||| |||||||||||||||||||||| |||||||| ||||||||||||| || ||||||||| |||||||||    |||||||||||  |||| |    
T  23202053 caaacggtcgaaattaaaataattaataggacctatggtgtaccactcttaaagatgatccaccataaacatcattt-ttattaaacttaacggttggga 23201955  T
Q  466 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    ||||||||| ||||||| ||||| || |||||| |||| |||||||||||||| |||||||||||||| |||| | ||||||||||    
T  23201954 tttatttggcaaacggaggaaaaggtgagggaccaaaatgccatttttattaaatgtgggaccaaaataaaaacatgaaattaaat 23201869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 272 - 437
Target Start/End: Complemental strand, 44498762 - 44498596
Alignment:
Q  272 agatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaaaatcaaac 370  Q
    ||||||| |||||||| || ||||||||||||||| |||||| ||||||||||||||| || |||||| ||||||  |||||||| || |||||||||||    
T  44498762 agatgaaaaaaaggaagaaaatttaggtgttggtgatacatcctaagataaaatagacatgcgtaatctaatggtcatcttttaagaaaaaaaatcaaac 44498663  T
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  44498662 ggttttaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacat 44498596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 315 - 538
Target Start/End: Original strand, 6349407 - 6349633
Alignment:
Q  315 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataatta---ataggatctatggtggaccac 411  Q
    |||||||||||| ||||| ||||||||| | | ||||||  ||| ||| ||||||| ||| |||||||||||  ||   ||| | |||||||||||||||    
T  6349407 taagataaaatacacttgcgtaatccaacgatcctctttagaaaaaaagatcaaacagtttaaattaaaatatatatatatatggtctatggtggaccac 6349506  T
Q  412 tcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccattt 511  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||  | || || ||||||||||||||||||||| || |||||| |||| |    ||    
T  6349507 tcttaaggttgatccaccatatacatcatttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgagggaccaaaaggtacgtt 6349606  T
Q  512 ttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||||||||||||||||||||    
T  6349607 ttattaattgtgggaccaaaatgaaaa 6349633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 360 - 548
Target Start/End: Complemental strand, 52240090 - 52239903
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaacca 459  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| ||||||     
T  52240090 aaaaatcaaacggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccatagacatcattt-gggttaaagttaaccc 52239992  T
Q  460 ttggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    ||||||||||||||| |||||||  ||||  | | | || ||||||    ||||||||||||||||| |||||| |||||  |||||||    
T  52239991 ttggaatttatttggcaaacggagaaaaacctgaagaaccaaaacgtacgttttattaattgtgggatcaaaataaaaatttgaaatta 52239903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 269 - 457
Target Start/End: Complemental strand, 56085650 - 56085465
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| | | ||| | ||| |||||| |||| ||  ||||||||||||| || ||||| |||||| |||  || ||| ||| |||||||||    
T  56085650 agaagatgaagaaaggaataaagaattaagtgttgatggttcactgtaagataaaatacacatgtgtgatccaacggtcatccttttaaaaaaaaatcaa 56085551  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |   |||||||||||||| |||||    
T  56085550 acggtttaaattaaaataattaataggatctatggtggaccactcttaaggttagtccaccataga---catttggggttaaagttaac 56085465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 337 - 470
Target Start/End: Original strand, 27850816 - 27850951
Alignment:
Q  337 atccaatggttctcttttaaaagaaaa--atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatata 434  Q
    |||||||| | ||| ||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |    
T  27850816 atccaatgatcctcctttaaaaaaaaagaatcaaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccataga 27850915  T
Q  435 catcatttggggttaaacttaaccattggaatttat 470  Q
    ||||||||| |||||||||||||  |||| ||||||    
T  27850916 catcatttgaggttaaacttaactgttgggatttat 27850951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 364 - 538
Target Start/End: Complemental strand, 1794621 - 1794447
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    ||||||||||| ||||||||| | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| || |    
T  1794621 atcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccaccatatacatcatttgggattaaacttaaccgttag 1794522  T
Q  464 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     |||||||||  |||| || ||||| || |||||  |||| |    |||||||||||||| || |||||||||||    
T  1794521 gatttatttgacaaacagaggaaaaagtgagggatcaaaaggtatattttattaattgtgagatcaaaatgaaaa 1794447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 269 - 538
Target Start/End: Complemental strand, 27847979 - 27847714
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||||||||||| | ||||||| | |||||||||  ||||||||||||||| ||||||||| || ||| ||||||   || ||| |||||    
T  27847979 agaagatgaagaaaaggaaaaaaagttaggtggtagtggtacattataagataaaatagacatgtgtaatctaacggtcctctttcttaaaaaagatcaa 27847880  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactct-taaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    | |||| ||||| ||| |||||||| | |||||||||||| | ||| |||  |||| ||||||||||   ||||||||||||||||||||| |  | |||    
T  27847879 agggttaaaattgaaa-aattaataaggtctatggtggacta-tctataatcttggcccaccatata---catttggggttaaacttaaccgtctggatt 27847785  T
Q  468 tatttggtaaacggaagaaaatgtaaggga-ctaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||| |||||||||||||  ||||||| | ||||   || |||||||||||||||||||||||| ||||    
T  27847784 tatttggcaaacggaagaaaaattaagggaccgaaaaataca-ttttattaattgtgggaccaaaataaaaa 27847714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 10168790 - 10168876
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  10168790 atttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 10168876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 294 - 551
Target Start/End: Complemental strand, 13165774 - 13165519
Alignment:
Q  294 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaat 392  Q
    ||||||| | ||||||||  ||||||||||||| |  || |||||||||||  | | ||||||||| ||| ||||||||||| |||||||||||||||||    
T  13165774 ttaggtggtagtggtacacagtaagataaaatacatctgcgtaatccaatgactattcttttaaaaaaaagatcaaacggtttaaattaaaataattaat 13165675  T
Q  393 aggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccat-tggaatttatttggtaaacggaagaaaatgt 491  Q
        ||||||||||||||||||||| |||||||||||||| |    |||||  ||||||||||||  |   | |||||||||  ||||||| |||||  |    
T  13165674 gaagtctatggtggaccactcttaaggttggtccaccataga---aatttgaagttaaacttaacagtcaaggatttatttgacaaacggaggaaaagat 13165578  T
Q  492 aagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
     | |||| |||||||||||||||||||||  |||||||||||||||| | ||||||||||    
T  13165577 gaaggacgaaaacgccatttttattaatt-agggaccaaaatgaaaacatgaaattaaat 13165519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 269 - 457
Target Start/End: Original strand, 26496122 - 26496308
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| |  ||||||||||||||   ||| ||| ||| ||| |||||    
T  26496122 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacatctgtgtaatccaatgaccctcattttaaaaaaatatcaa 26496221  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    |||||| |||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||  || ||||||||| |||||    
T  26496222 acggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat--ttgggggttaaagttaac 26496308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 34326989 - 34326868
Alignment:
Q  310 catcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacc 409  Q
    ||||||||||||||||| ||||| ||||| ||||||| ||| || |||| ||||  |||||| || ||||| |||||||||||||||||||| || ||||    
T  34326989 catcgtaagataaaatacacttgcgtaattcaatggtcctcgttaaaaaaaaaatacaaacgattaaaatttaaataattaataggatctatagtagacc 34326890  T
Q  410 actcttaaagttggtccaccat 431  Q
    ||||||||||||||||||||||    
T  34326889 actcttaaagttggtccaccat 34326868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 313 - 425
Target Start/End: Complemental strand, 36845669 - 36845557
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || || |||||||||||||  |||||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  36845669 cgtaagataaaatacacctgcgtaatccaatggtcatcttttaaaaaaaatatcaaacagtttacattaaaataattaataggacctatggtggaccact 36845570  T
Q  413 cttaaagttggtc 425  Q
    ||||| |||||||    
T  36845569 cttaatgttggtc 36845557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 366 - 505
Target Start/End: Original strand, 15449984 - 15450122
Alignment:
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaa 465  Q
    ||||| ||| |||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||| ||| ||||||| ||||||||||||| |  | |    
T  15449984 caaacagtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccacgatagacaacatttggagttaaacttaaccgtaag-a 15450082  T
Q  466 tttatttggtaaacggaagaaaatgtaagggactaaaacg 505  Q
    ||||||||| ||||||| ||||| ||||| |||| |||||    
T  15450083 tttatttggcaaacggaggaaaaggtaagcgacttaaacg 15450122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 364 - 551
Target Start/End: Complemental strand, 33231597 - 33231412
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattg- 462  Q
    |||||| |||||||||||||| |||||||||  | ||||||||||||||  ||| ||| |||||||||| ||||  ||  |||||||||||||| | |      
T  33231597 atcaaatggttgaaattaaaa-aattaatagagtttatggtggaccacttctaaggtttgtccaccatagacat--ttgagggttaaacttaacaagtat 33231501  T
Q  463 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||||| ||||||   ||||  | |||||||||||| |||||||||||||||||||||| |||||||||| | ||||||||||    
T  33231500 gaatttatttggcaaacggtgaaaaagatgagggactaaaacaccatttttattaattgtgggactaaaatgaaaacatgaaattaaat 33231412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 33232704 - 33232785
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaat 546  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  33232704 atttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaataaaaatatgaaat 33232785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 269 - 457
Target Start/End: Complemental strand, 1520114 - 1519929
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| | | | |||||||||| || | || |||||||||||||| ||||  |||||| ||||||  || ||||||||  | |||||    
T  1520114 agaagatgaagaaagggagacataattaggtgttgttgattcaccgtaagataaaatacacttacgtaatctaatggtcatccttttaaaaatataatca 1520015  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||||| || || ||||||   | |||||||||||||| |||||    
T  1520014 aacggtttaaattaaaataattaataggatctatggtggatcact-ttaaaggtgatctaccata---aacatttggggttaaagttaac 1519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 313 - 457
Target Start/End: Complemental strand, 40723484 - 40723345
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| ||  | ||||||||||||| ||| |  |||| ||| |||||||| || | ||| ||||||||||||||||||||||| |||||||    
T  40723484 cgtaagataaaatacaccagcgtaatccaatggtcctcgt--aaaaaaaagatcaaacgattaacatttaaataattaataggatctatggtagaccact 40723387  T
Q  413 cttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||| ||||||||||||||||   |||||| |||||||||||||    
T  40723386 cttaaggttggtccaccatata---catttgaggttaaacttaac 40723345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 313 - 432
Target Start/End: Original strand, 52138648 - 52138769
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctctttt--aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    |||||||||||||| || || ||||||||||    ||| |||  |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  52138648 cgtaagataaaatacacatgcgtaatccaataaccctccttttaaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggacca 52138747  T
Q  411 ctcttaaagttggtccaccata 432  Q
     |||||||||||||| ||||||    
T  52138748 ttcttaaagttggtctaccata 52138769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 54866638 - 54866723
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  54866638 atttatttggcaaacggaggaaaacgtaagggactaaaacaccatttttattaattgt-ggaccaaaatgaaaatatgaaattaaat 54866723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 364 - 538
Target Start/End: Complemental strand, 6348362 - 6348191
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    |||||| |||| |||||| ||  ||||||| | |||| |||||||||||||||| |||||||||||||| |   |||||| ||||||||||||||||  |    
T  6348362 atcaaagggttaaaattagaaatattaataaggtctacggtggaccactcttaaggttggtccaccataga---catttgaggttaaacttaaccatcag 6348266  T
Q  464 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||||||  |||| || ||||| || ||| || |||| |    |||||||||||||||||||||||||||||    
T  6348265 aatttatttgacaaacagaggaaaaagtgaggaaccaaaaggtacgttttattaattgtgggaccaaaatgaaaa 6348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 313 - 458
Target Start/End: Complemental strand, 26630049 - 26629908
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || |  |||||| ||||||  || ||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  26630049 cgtaagataaaatacacctacgtaatctaatggtcatcctttaaaaaaaagatcaaacagtttacattaaaataattaataggacctatggtggaccact 26629950  T
Q  413 cttaaagttggtccaccatatacatcatttggggttaaacttaacc 458  Q
    ||| |||||||| |||||||   | |||||||||||||| ||||||    
T  26629949 ctt-aagttggttcaccata---aacatttggggttaaagttaacc 26629908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 368 - 538
Target Start/End: Original strand, 42810115 - 42810283
Alignment:
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||| ||||||||| | |||||| | |||||||||||| ||||||||  ||||| ||||||| |||||  | |||||||||||||||     | |||    
T  42810115 aacggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccatagacatc--tgggggttaaacttaacaccaaggatt 42810212  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||| ||||||| |||||||| ||||||| ||| |    |||||||||||||||||||||||||||||    
T  42810213 tatttggcaaacggaggaaaatgtgagggacttaaaagtacgttttattaattgtgggaccaaaatgaaaa 42810283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 314 - 432
Target Start/End: Original strand, 49896441 - 49896560
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||| ||||||| ||  | ||| |||||||||||||||| | |||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  49896441 gtaagatacaatagacatgcatgatctaatggttctcttttaataaaaaatatcaaacggtttaaattaaaataattaacaggatctacagtggaccact 49896540  T
Q  413 cttaaagttggtccaccata 432  Q
    ||| | ||||||||||||||    
T  49896541 ctttaggttggtccaccata 49896560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 364 - 551
Target Start/End: Complemental strand, 50547114 - 50546929
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatt-g 462  Q
    |||||| |||||||||||||| |||||||||  | ||||||||||||||  ||| |||  ||| ||||| ||||  ||  ||||||||||||||   | |    
T  50547114 atcaaatggttgaaattaaaa-aattaatagagtttatggtggaccacttctaaggtttatccgccatagacat--ttgagggttaaacttaacaggtag 50547018  T
Q  463 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    | |||||||||| ||||||  |||||  | ||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||    
T  50547017 ggatttatttggcaaacggtggaaaagatgagggactaaaacgccatttttattaattgtgggactaaaatgaagacatgaaattaaat 50546929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 414 - 538
Target Start/End: Original strand, 1588045 - 1588169
Alignment:
Q  414 ttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccattttt 513  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||  |   ||||||||||||||||||| ||||| || ||||| | |||||    ||||    
T  1588045 ttaaggttggtctaccatagacatcatttggggttaaacttaacagtcataatttatttggtaaacggaggaaaaagtgagggatttaaacgtacatttt 1588144  T
Q  514 attaattgtgggaccaaaatgaaaa 538  Q
    |||||||||||||| ||||||||||    
T  1588145 attaattgtgggactaaaatgaaaa 1588169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 397 - 551
Target Start/End: Complemental strand, 4714195 - 4714042
Alignment:
Q  397 tctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgga--atttatttggtaaac-ggaagaaaatgtaa 493  Q
    ||||||||||||||||||||| |||| ||||||||| ||||   |||  |||||||||||  | | ||  |||||||||| |||  ||| || || ||||    
T  4714195 tctatggtggaccactcttaaggttgatccaccatagacat---ttgaagttaaacttaat-agtcgatgatttatttggcaaaaaggaggataaggtaa 4714100  T
Q  494 gggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  4714099 gggattaaaacgccatttttattaattgtgggaccaaaataaaaatatgaaattaaat 4714042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 313 - 538
Target Start/End: Complemental strand, 1830009 - 1829789
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||||||| |  |||||| |||||| ||| |||||||   |||||||| |||| | ||||| | |||||||| | |||| | |||||||||    
T  1830009 cgtaagataaaatagacctacgtaatctaatggtcctcctttaaaa---aaatcaaatggttaagattaataaaattaataaggtctacgatggaccact 1829913  T
Q  413 cttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttt 512  Q
     ||||||||||||||| ||| ||||  || | | | ||| |||||  | ||||||||||||  ||||| | ||||| || |||||||||||      |||    
T  1829912 tttaaagttggtccacgatagacat--ttagagttaaaagttaacagtcggaatttatttgacaaacgtaggaaaaagtgagggactaaaagatacgttt 1829815  T
Q  513 tattaattgtgggaccaaaatgaaaa 538  Q
    ||||||||||||||||||||||||||    
T  1829814 tattaattgtgggaccaaaatgaaaa 1829789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 298 - 437
Target Start/End: Original strand, 19750135 - 19750275
Alignment:
Q  298 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaatagga 396  Q
    |||||| |||| |||||||||||| |||| || || || ||||||   | || ||||||||| ||| |||||||| || |||||||||||||||||||||    
T  19750135 gtgttgatggttcatcgtaagatagaatacacctgcgtgatccaacaatcctccttttaaaaaaaagatcaaacgatttaaattaaaataattaatagga 19750234  T
Q  397 tctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||||||||||| ||| ||||  || |||||||||| ||||    
T  19750235 tctatggtggacaacttttaagatttgtccaccatagacat 19750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 298 - 437
Target Start/End: Complemental strand, 19789671 - 19789531
Alignment:
Q  298 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaatagga 396  Q
    |||||| |||| |||||||||||| |||| || || || ||||||   | || ||||||||| ||| |||||||| || |||||||||||||||||||||    
T  19789671 gtgttgatggttcatcgtaagatagaatacacctgcgtgatccaacaatcctccttttaaaaaaaagatcaaacgatttaaattaaaataattaatagga 19789572  T
Q  397 tctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||||||||||| ||| ||||  || |||||||||| ||||    
T  19789571 tctatggtggacaacttttaagatttgtccaccatagacat 19789531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 377 - 538
Target Start/End: Original strand, 7708710 - 7708868
Alignment:
Q  377 aattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggta 476  Q
    |||||| | |||||||| | |||||| || |||||| |||| |||||||||||||| | ||   || | |||||| |||||  |||| |||||||||| |    
T  7708710 aattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatat---ttagagttaaagttaacacttgggatttatttggca 7708806  T
Q  477 aacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||| ||  |||| || |||||||||||||||| ||||||||||||| | |||||||||||||    
T  7708807 aacagagaaaaaggtgagggactaaaacgccacttttattaattgtagaaccaaaatgaaaa 7708868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 371 - 538
Target Start/End: Complemental strand, 11968713 - 11968547
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 470  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| |||| || | | |||||| || ||    |||||||||    
T  11968713 ggtttaaattaaaataattaataggatctatgatggaccactcttaaggttggtccatcatagacataatct-gagttaaagttgacagccggaatttat 11968615  T
Q  471 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||   |||||||  ||||| | |||||| |||| |    |||||||||||||| ||||||||||||||    
T  11968614 tttacaaacggagcaaaatctgagggaccaaaaagtatgttttattaattgtgagaccaaaatgaaaa 11968547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 371 - 437
Target Start/End: Complemental strand, 4871695 - 4871629
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||    
T  4871695 ggtttaaattaaaataattaataggatctacggtggaccactctttaggttggtccaccatagacat 4871629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 10167534 - 10167448
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||  ||||||| |||||| | ||||||||||| || ||||||||||||||||| ||||||||||||| | ||||||||||    
T  10167534 atttatttgacaaacggaggaaaatatgagggactaaaatgcaatttttattaattgtggtaccaaaatgaaaacatgaaattaaat 10167448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 348 - 457
Target Start/End: Original strand, 28590795 - 28590904
Alignment:
Q  348 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttgggg 446  Q
    ||||||||| | |||| ||||||| ||| | ||||||||||||||||||||||||| || | |||||||||||||||| ||||||||| | ||||| |||    
T  28590795 ctcttttaataaaaaagatcaaacagtttatattaaaataattaataggatctatgatgaatcactcttaaagttggttcaccatataga-catttaggg 28590893  T
Q  447 ttaaacttaac 457  Q
    ||||| |||||    
T  28590894 ttaaatttaac 28590904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 314 - 410
Target Start/End: Original strand, 23103866 - 23103962
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||  | |||||||||| ||| || |||||||  ||| ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  23103866 gtaagataaaatagacacgcgtaatccaatagttatccttttaaatcaaagatcaaacggtttaaattaaaa-aattaataggatctatggtggacca 23103962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 277 - 539
Target Start/End: Original strand, 37884098 - 37884358
Alignment:
Q  277 aagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaatcaaacggttg 375  Q
    |||||||||||||| | ||||||| | |||||| || |||||||||| ||||| |||| |||||||  || |||||| | ||| ||| |||||| ||||     
T  37884098 aagaaaaggaaaaaaaattaggtggtagtggtatatggtaagataaattagacatgtgcaatccaaccgtcctctttcttaaaaaaagatcaaagggtta 37884197  T
Q  376 aaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggt 475  Q
    |||||  || | |||||| | |||||||||||| |    |||  ||||| |||||||||    |||||||||||||||||||  |  | ||||||||||     
T  37884198 aaattggaaaatttaataaggtctatggtggactatatataatattggttcaccatata---tatttggggttaaacttaacagtctggatttatttggc 37884294  T
Q  476 aaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaat 539  Q
    ||||||| ||||| |||| |||| |||| |    ||||||||||| |||||| |||||||||||    
T  37884295 aaacggaggaaaaagtaaaggaccaaaaggtacattttattaattatgggacaaaaatgaaaat 37884358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 313 - 411
Target Start/End: Original strand, 38555134 - 38555234
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||| |||||||||||||||||||| |||||  || ||| ||||||||||| ||||||||| | ||||||   |||||||| |||||    
T  38555134 cgtaagataaaatagacatgtgtaatccaatggttctcctttaaataaaaaagatcaaacggtttaaattaaaaaatttaataaagtctatggtagacca 38555233  T
Q  411 c 411  Q
    |    
T  38555234 c 38555234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 465 - 538
Target Start/End: Original strand, 50548230 - 50548303
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| |||| || |||||||| |||||||||||||  ||| |||||||||||||||||||||||||||    
T  50548230 atttatttggcaaacagaggaaaatgtgagggactaaaacgttattcttattaattgtgggaccaaaatgaaaa 50548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 495 - 551
Target Start/End: Original strand, 23203990 - 23204046
Alignment:
Q  495 ggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  23203990 ggaccaaaacgccatttttattaaatgtgggaccaaaatgaaaatatgaaattaaat 23204046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 53205490 - 53205573
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||| ||||||| ||||| || |||||||||||||||  |||| ||||||||||||| |||||||||||  |||||||    
T  53205490 atttatttggcaaacggaggaaaaagtgagggactaaaacgcctatttttttaattgtgggacgaaaatgaaaatctgaaatta 53205573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 458
Target Start/End: Complemental strand, 53432281 - 53432179
Alignment:
Q  353 ttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaac 452  Q
    |||||| ||| ||||||||||| ||||| ||| |||||||| | | |||||||  ||||||||||||||||| ||||||| |   |||||||||||||||    
T  53432281 ttaaaaaaaagatcaaacggttaaaattgaaaaaattaataaggtgtatggtgagccactcttaaagttggttcaccataga---catttggggttaaac 53432185  T
Q  453 ttaacc 458  Q
    ||||||    
T  53432184 ttaacc 53432179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 269 - 421
Target Start/End: Original strand, 41349339 - 41349493
Alignment:
Q  269 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatc 366  Q
    ||||||||||||||| | | ||| | |||||||||| | || || | | ||||| ||||||| ||  ||||| |||||| ||||||||||| ||| ||||    
T  41349339 agaagatgaagaaaatgtacaaaaaattaggtgttgatagtgcaccattagatagaatagacctgcataatcaaatggtcctcttttaaaaaaaataatc 41349438  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagtt 421  Q
    |||||||| |||| ||||| ||||||| ||||||| ||||||  |||||||||||    
T  41349439 aaacggtttaaataaaaatgattaatatgatctatagtggacatctcttaaagtt 41349493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 7053402 - 7053321
Alignment:
Q  348 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    ||||||||| | |||| |||||||| || ||||||||| |||||||||||||||||||||| |||||||||  |||||||||    
T  7053402 ctcttttaataaaaaagatcaaacgatttaaattaaaaaaattaataggatctatggtggatcactcttaagattggtccac 7053321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 410
Target Start/End: Complemental strand, 45535303 - 45535207
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||  | |||||||||| ||| || ||| ||| |||| ||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  45535303 gtaagataaaatagacacgcgtaatccaatagttatccttttaaataaaagatcaaacagtttaaattaaaa-aattaataggatctatggtggacca 45535207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 551
Target Start/End: Complemental strand, 54865213 - 54865128
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||  ||||||| |||||||| |||||||||||| | ||||| ||||||| ||||||||||||||||| |  |||||||||    
T  54865213 atttatttgacaaacggaggaaaatgtgagggactaaaacacaatttt-attaattatgggaccaaaatgaaaacataaaattaaat 54865128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 549
Target Start/End: Complemental strand, 42871204 - 42871120
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaa 549  Q
    |||||||||| ||||||| ||||| || |||||| ||||||    ||||||||||||||||| ||||||||||||  ||||||||    
T  42871204 atttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaatttgaaattaa 42871120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 345 - 428
Target Start/End: Original strand, 56157384 - 56157468
Alignment:
Q  345 gttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    |||| ||||||||| |||| ||||||  ||| || |||||| |||||||||||||||||||||| |||||||||  |||||||||    
T  56157384 gttcccttttaaaataaaagatcaaatagttaaagttaaaaaaattaataggatctatggtggaacactcttaagattggtccac 56157468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 364 - 456
Target Start/End: Original strand, 8682756 - 8682845
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaa-agttggtccaccatatacatcatttggggttaaacttaa 456  Q
    |||||| |||||||||||||| |||||||| |||||||| |||||||||||||| | || |||||||||| |   ||||||| |||||||||||    
T  8682756 atcaaagggttgaaattaaaa-aattaatatgatctatgatggaccactcttaagatttagtccaccataga---catttggtgttaaacttaa 8682845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 2311032 - 2310959
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| || |||| |||||| | |||||| ||||||    |||||||||||||||||||||||||||||    
T  2311032 atttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaa 2310959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 4129102 - 4129029
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| |||||||  |||| ||||||||| |||| |    |||||||||||||||||||||||||||||    
T  4129102 atttatttggcaaacggagaaaaaagtaagggaccaaaatgtacattttattaattgtgggaccaaaatgaaaa 4129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 264 - 374
Target Start/End: Complemental strand, 392633 - 392522
Alignment:
Q  264 aaggtagaagatgaagaa-aag-gaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaa 361  Q
    |||||||||||||||||| ||| |||||| | ||||||||||| || |    |||||||||||||||| | | ||||||| ||||| |||||||||| ||    
T  392633 aaggtagaagatgaagaagaagagaaaaaaaattaggtgttggaggcattcggtaagataaaatagacctctctaatccattggttatcttttaaaa-aa 392535  T
Q  362 aaatcaaacggtt 374  Q
    |||| ||||||||    
T  392534 aaatgaaacggtt 392522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 364 - 539
Target Start/End: Complemental strand, 1587390 - 1587217
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    ||||||||||| | ||||| | |||||||| | | || | |||| |||| |||||||||||| || ||| ||||  || | | | ||| |||||||| ||    
T  1587390 atcaaacggttaagattaacaaaattaataaggtatacgatggaacacttttaaagttggtctactatagacat--ttagagttaaaagttaaccatcgg 1587293  T
Q  464 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaat 539  Q
     |||||||||| ||||||| ||||| || |||||| |||| |    |||||||||||||| ||| |||||||||||    
T  1587292 gatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagactaaaatgaaaat 1587217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 345 - 428
Target Start/End: Complemental strand, 36243747 - 36243663
Alignment:
Q  345 gttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    |||| ||||||||| |||| ||||||||||| || |||||| | | ||||| |||||||||||| |||||||||  |||||||||    
T  36243747 gttcccttttaaaataaaagatcaaacggttaaagttaaaaaattcaatagaatctatggtggaacactcttaagattggtccac 36243663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 548
Target Start/End: Original strand, 393689 - 393728
Alignment:
Q  509 tttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  393689 tttttattaattgtgggaccaaaatgaaaatttgaaatta 393728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 538
Target Start/End: Original strand, 42872308 - 42872379
Alignment:
Q  467 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||| ||||||| ||||| || |||||| ||||||    ||||||||||| |||||||||||||||||    
T  42872308 ttatttggcaaacggaggaaaaagtgagggaccaaaacgtacattttattaattatgggaccaaaatgaaaa 42872379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 1188952 - 1188879
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| ||||| || |||||| |||| |    |||||||||||||||||||||||| ||||    
T  1188952 atttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaattgtgggaccaaaataaaaa 1188879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 37882943 - 37882870
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| ||||||| ||||| || |||||| |||| |    |||||||||||||||||| ||||||||||    
T  37882943 atttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 37882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 40724729 - 40724786
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaata 326  Q
    |||||||||||||||||||| | | |||  |||||||||||||||| |||||| ||||    
T  40724729 agaagatgaagaaaaggaaacaaagttatatgttggtggtacatcgcaagatataata 40724786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 40792860 - 40792787
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| |||||||  ||||| | |||||| |||| |    |||||||||||||||||||||||||||||    
T  40792860 atttatttggcaaacggagaaaaatctgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaa 40792787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 533
Target Start/End: Original strand, 49344016 - 49344085
Alignment:
Q  465 atttatttggtaaacggaagaaaatgt-aagggactaaaacgccatttttattaattgtgggaccaaaat 533  Q
    |||||||||| ||||||| ||||| || |||||||| |||| |   ||||||||||||||||||||||||    
T  49344016 atttatttggcaaacggaggaaaaagtgaagggacttaaacccacgttttattaattgtgggaccaaaat 49344085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 53204470 - 53204397
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| |||||||  ||||  | ||| |||||||||||  |||||||||||||| || |||||||||||    
T  53204470 atttatttggcaaacggagaaaaaattgaggaactaaaacgcctgttttattaattgtgagatcaaaatgaaaa 53204397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 53435661 - 53435734
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||||||||| ||||| ||| |||||||    |||| |||||||||||||||| ||||||| |||||| ||||    
T  53435661 atcaaacggttaaaatttaaaaaattaatgaagtctacggtggaccactcttaaggttggtctaccatagacat 53435734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 135; Significance: 6e-70; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 268 - 538
Target Start/End: Original strand, 43386 - 43655
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| | |||||||| |||| || ||||| ||||||||||||||||  ||||| |||||||||||||| ||| ||||||||    
T  43386 tagaagatgaagaaaaggaaaaaaaattaggtgtcggtgatatatcgttagataaaatagacttgcctaatcaaatggttctctttttaaa-aaaaatca 43484  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 467  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||| |  | | |    
T  43485 aacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaaccgtcaggact 43584  T
Q  468 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    ||||||| ||||||| ||||| || ||||||| ||||     ||||||||||| |||||||||||| ||||    
T  43585 tatttggcaaacggaggaaaaagtgagggacttaaacatacgttttattaattatgggaccaaaataaaaa 43655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 126; Significance: 2e-64; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 267 - 538
Target Start/End: Original strand, 53997 - 54265
Alignment:
Q  267 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatc 366  Q
    |||||||||||| |||||||||||   | ||||||||||||||||||||| |||||||||||||||  ||||||||||   |||||||  || |||||||    
T  53997 gtagaagatgaacaaaaggaaaaa---tcaggtgttggtggtacatcgtatgataaaatagacttgcttaatccaatgacactcttttttaaaaaaaatc 54093  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 466  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| |||||||  |    ||    
T  54094 aaacagtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttggggttatacttaacagtcacgat 54193  T
Q  467 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||| ||||||| |||||| | |||||| |||||||   |||||||||||||| ||||||||| ||||    
T  54194 ttatttggcaaacggaggaaaatttgagggaccaaaacgcacgttttattaattgtgcgaccaaaattaaaa 54265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 414 - 538
Target Start/End: Complemental strand, 52749 - 52628
Alignment:
Q  414 ttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccattttt 513  Q
    |||| |||||||||||||||||||   ||   |||||| |||||  | || |||||||||| |||||||  ||||| | |||||| ||||||    ||||    
T  52749 ttaaggttggtccaccatatacat---ttaaagttaaagttaactgtcgggatttatttggcaaacggagaaaaatctgagggaccaaaacgtacatttt 52653  T
Q  514 attaattgtgggaccaaaatgaaaa 538  Q
    ||||||||||||| |||||||||||    
T  52652 attaattgtgggatcaaaatgaaaa 52628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 86; Significance: 1e-40; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 364 - 548
Target Start/End: Original strand, 125138 - 125323
Alignment:
Q  364 atcaaacggttgaaattaaaataatt-aataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattg 462  Q
    |||||| |||| ||||||||| |||| |||| | |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| ||     
T  125138 atcaaagggtttaaattaaaaaaatttaataaggtctatggtggaccacttttaaggttggtccatcatatacatcatttggggttaaacttaaccgtta 125237  T
Q  463 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    | |||||||||| ||||||| ||||| || |||||| |||| |    ||||||||||||||||||||||||||||||  |||||||    
T  125238 ggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaatta 125323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 300 - 538
Target Start/End: Complemental strand, 124240 - 124005
Alignment:
Q  300 gttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatc 398  Q
    |||| |||||||  ||||| || ||||||| ||  |||||| |||||| |||||| ||| || | |||||||| || ||||||| | | |||||| ||||    
T  124240 gttgttggtacactgtaagttacaatagacatgcataatcctatggttatctttttaaaaaatagatcaaacgatttaaattaaca-atttaatacgatc 124142  T
Q  399 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggac 498  Q
    ||||||||||||||||||| |||||||||||||| |    |||||||||||||||||||| |  | |||||||||| |||| || ||||| || ||||||    
T  124141 tatggtggaccactcttaaggttggtccaccataga---tatttggggttaaacttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggac 124045  T
Q  499 taaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
     |||| |    |||||||||||||||||||||||||||||    
T  124044 caaaatgtacgttttattaattgtgggaccaaaatgaaaa 124005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 127692 - 127568
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||||||| ||| ||||| ||| |||||| ||| ||| ||||||| ||||||| |||||||||  ||||||||||||||||||||||||||    
T  127692 cgtaagataaaatagacctgtttaatctaatcgttctccttttaaaaaaaaatctaacggtttaaattaaaaacattaataggatctatggtggaccact 127593  T
Q  413 cttaaagttggtccaccatatacat 437  Q
    ||||| |||| | ||||||| ||||    
T  127592 cttaaggttgtttcaccatagacat 127568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 269 - 457
Target Start/End: Original strand, 8000 - 8188
Alignment:
Q  269 agaagatgaagaaaagg---aaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aa 364  Q
    ||||||||||||||||    ||||| | |||||||||| |||| || | | ||||||||||||||||  | ||| |||||| ||||||||||| ||| ||    
T  8000 agaagatgaagaaaagataaaaaaaaaattaggtgttgatggtgcaccattagataaaatagacttgcatgatcaaatggtcctcttttaaaaaaaacaa 8099  T
Q  365 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||| ||||||| |||| ||||||||| |   |||||||||||||| |||||    
T  8100 tcaaacggtttaaattaaaataattaatataatctatgatggacc-ctcttaaggttgatccaccataga---catttggggttaaaattaac 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 437
Target Start/End: Original strand, 461 - 662
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaa--aggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtg 334  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||  | |||||| ||| || ||||| ||||||  |||||| ||  |||||   |      
T  461 tgtgagttgaagatgatgaagattagtaaggtagaagatgaagaaataaagaaaaaaatt-agttgttgttggtactccgtaagttacgatagaac-gca 558  T
Q  335 taatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatat 433  Q
    ||||||||||||  |||||| ||| || | ||||||||||| ||||||||| | |||||| | ||||||||||||||||||||| |||||||||  ||||    
T  559 taatccaatggtcatctttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccattatat 658  T
Q  434 acat 437  Q
    ||||    
T  659 acat 662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 457
Target Start/End: Complemental strand, 108725 - 108630
Alignment:
Q  361 aaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 457  Q
    ||||||||| |||| |||||| |||||||||||| ||||||||||||||||| |||| |||||||||||||| | || |||||||||||||||||||    
T  108725 aaaatcaaaaggtttaaattataataattaatagcatctatggtggaccacttttaaggttggtccaccata-atattatttggggttaaacttaac 108630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 240 - 548
Target Start/End: Original strand, 62914 - 63221
Alignment:
Q  240 gagttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatc 339  Q
    ||||||||||||||||| |||  |||| |||||||| ||||||   ||||| | |||||||||| ||||||| |||||| || || | ||  |  ||||     
T  62914 gagttgaagatgatgaatattagtaagatagaagataaagaaagaaaaaaaaaattaggtgttgttggtacaccgtaagttacaacaaacacgcataatt 63013  T
Q  340 caatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatc 438  Q
    |||| ||  |||||| |   || | ||||||||||| ||||| ||| |||||||    | |||||||||||| ||||||  ||| |||| |||| ||||     
T  63014 caattgtgatctttttagcaaacagatcaaacggttaaaatttaaaaaattaatgaagtttatggtggaccattcttaagattgatccatcatagacat- 63112  T
Q  439 atttggggttaaacttaaccatt-ggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 537  Q
      |||  ||||||||||||  |  || |||||||||| |||||||  ||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  63113 --ttgaagttaaacttaacagtcagggatttatttggcaaacggagaaaaatgtgagggactaaaacgccatctttattaattgtgggaccaaaatgaaa 63210  T
Q  538 ataagaaatta 548  Q
    | | |||||||    
T  63211 acacgaaatta 63221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 465 - 548
Target Start/End: Complemental strand, 61960 - 61877
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 548  Q
    |||||||||| |||||||||||||  | |||||||||||||||||||||||||||| || |||||||||||||| | |||||||    
T  61960 atttatttggcaaacggaagaaaagatgagggactaaaacgccatttttattaattatgagaccaaaatgaaaacatgaaatta 61877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 406 - 539
Target Start/End: Original strand, 2426 - 2557
Alignment:
Q  406 gaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacg 505  Q
    ||||||| |||| ||||||||||||| ||||| |||||| |||||| |||||  | ||||||||||||| |||| || |||||  |||||||| |||| |    
T  2426 gaccacttttaaggttggtccaccat-tacat-atttggagttaaagttaacagtcggaatttatttggaaaacagaggaaaaactaagggaccaaaagg 2523  T
Q  506 ccatttttattaattgtgggaccaaaatgaaaat 539  Q
       |||||||||||||||||||||||||||||||    
T  2524 tactttttattaattgtgggaccaaaatgaaaat 2557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 364 - 538
Target Start/End: Complemental strand, 21335 - 21163
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 463  Q
    ||||||||||| ||||| ||| |||||||    |||||||||||||||||| || |||||||||||||| |   |||||| |||||||||||| ||  |     
T  21335 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactctgaaggttggtccaccataga---catttgtggttaaacttaa-caacga 21240  T
Q  464 a--atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |  |||||||||| ||||||| |||||  |||||||  |||| |   |||||||||||| |||||| ||||||||||    
T  21239 atgatttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaattatgggactaaaatgaaaa 21163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 354 - 437
Target Start/End: Complemental strand, 32790 - 32705
Alignment:
Q  354 taaaagaaaaatcaaacggttgaaattaaaataat--taataggatctatggtggaccactcttaaagttggtccaccatatacat 437  Q
    ||||| ||| ||||||||||| ||||||||| ||   |||||||||||||| |||||||||| ||| |||||||||||||| ||||    
T  32790 taaaaaaaagatcaaacggtttaaattaaaaaaaaaataataggatctatgatggaccactcctaaggttggtccaccatagacat 32705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 551
Target Start/End: Original strand, 787 - 836
Alignment:
Q  502 aacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 551  Q
    |||||||||||||||||||| ||||||||||| |||| | ||||||||||    
T  787 aacgccatttttattaattgagggaccaaaataaaaacatgaaattaaat 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 23047 - 23086
Alignment:
Q  243 ttgaagatgatgaagatttataaggtagaagatgaagaaa 282  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  23047 ttgaagatgatgaagattaataaggttgaagatgaagaaa 23086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 362 - 432
Target Start/End: Complemental strand, 22190 - 22120
Alignment:
Q  362 aaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||||| |||| ||||||||  |||||||||| |||||||||||||||    || ||||||||||||||    
T  22190 aaatcaaatggtttaaattaaagaaattaatagggtctatggtggaccacctacaatgttggtccaccata 22120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 18921 - 18848
Alignment:
Q  465 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 538  Q
    |||||||||| |||||||  |||| || ||||||||||||   | ||||||||| | |||||||||||||||||    
T  18921 atttatttggcaaacggagtaaaaagtgagggactaaaacataagttttattaaatatgggaccaaaatgaaaa 18848  T

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