View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16742_low_22 (Length: 254)
Name: NF16742_low_22
Description: NF16742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16742_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 42221764 - 42222003
Alignment:
| Q |
1 |
tggttcaacaccgacatgaaactatcgtaaagattaagaattaagaaaggtttagaatgatgttttgtttgttggttcaatttggtcacggcttgggtta |
100 |
Q |
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| T |
42221764 |
tggttcaacaccgacatgaaactatcgtaaagattaagaattaaaaaaggtttagaatgatgttttgtttgttggttcaatttggtcacggcttgggtta |
42221863 |
T |
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| Q |
101 |
agagtgtgttatggtaaactgcgaggaggttgttagatgtttcgttgcattgtttgaatgaggttgaagctgtcattgaaggtaggcatccaatcggttg |
200 |
Q |
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||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
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| T |
42221864 |
agagtatgttatggtaaaatgcgaggaggttgttagatgtttcgttgcattgtttgaatgaggttgaagttgtcattgaaggtagacatccaatcggttg |
42221963 |
T |
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| Q |
201 |
tagattattcacaattactttcttcactcccaatcctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
42221964 |
tagattattcacaattactttcttcactcccaatcctttg |
42222003 |
T |
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