View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16742_low_6 (Length: 449)

Name: NF16742_low_6
Description: NF16742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16742_low_6
NF16742_low_6
[»] chr1 (48 HSPs)
chr1 (237-432)||(16964902-16965101)
chr1 (1-140)||(16964663-16964805)
chr1 (273-420)||(46318435-46318582)
chr1 (268-424)||(49801766-49801920)
chr1 (335-428)||(15232897-15232990)
chr1 (269-434)||(14478404-14478570)
chr1 (316-434)||(48527672-48527790)
chr1 (315-434)||(52078003-52078122)
chr1 (313-434)||(9226071-9226193)
chr1 (244-434)||(51445728-51445918)
chr1 (313-432)||(48096890-48097008)
chr1 (311-434)||(44999315-44999440)
chr1 (269-432)||(5612897-5613060)
chr1 (362-434)||(45584913-45584985)
chr1 (295-434)||(9485149-9485282)
chr1 (313-435)||(10722233-10722355)
chr1 (376-434)||(13147336-13147394)
chr1 (314-435)||(13894751-13894872)
chr1 (305-434)||(35943295-35943425)
chr1 (241-434)||(46467284-46467477)
chr1 (335-434)||(26802078-26802178)
chr1 (376-434)||(3617417-3617475)
chr1 (299-434)||(6049267-6049403)
chr1 (269-432)||(26286552-26286715)
chr1 (269-434)||(24517428-24517595)
chr1 (313-435)||(46110418-46110543)
chr1 (313-435)||(10711925-10712047)
chr1 (315-434)||(15072647-15072768)
chr1 (364-434)||(15746675-15746744)
chr1 (237-346)||(23091569-23091679)
chr1 (294-421)||(40109509-40109638)
chr1 (318-410)||(7306116-7306209)
chr1 (350-434)||(18821632-18821717)
chr1 (381-428)||(9482599-9482646)
chr1 (364-434)||(41873879-41873949)
chr1 (364-417)||(12665945-12665998)
chr1 (314-410)||(27556431-27556527)
chr1 (355-434)||(46111395-46111474)
chr1 (360-434)||(27814430-27814504)
chr1 (273-370)||(42245778-42245872)
chr1 (397-434)||(23091490-23091527)
chr1 (364-428)||(28050465-28050529)
chr1 (269-411)||(51299441-51299584)
chr1 (237-282)||(16123587-16123632)
chr1 (397-434)||(34350251-34350288)
chr1 (364-429)||(51300168-51300233)
chr1 (269-434)||(14477601-14477769)
chr1 (366-434)||(34351875-34351942)
[»] chr8 (39 HSPs)
chr8 (268-434)||(32695087-32695251)
chr8 (272-434)||(24192478-24192641)
chr8 (308-434)||(20180525-20180652)
chr8 (297-435)||(17455184-17455322)
chr8 (335-428)||(13117511-13117604)
chr8 (270-434)||(32798344-32798509)
chr8 (313-434)||(9854735-9854857)
chr8 (237-434)||(8571394-8571594)
chr8 (360-430)||(42098706-42098776)
chr8 (313-434)||(31845652-31845772)
chr8 (270-425)||(40437409-40437565)
chr8 (364-434)||(10669353-10669423)
chr8 (364-432)||(42877758-42877825)
chr8 (355-435)||(43202233-43202313)
chr8 (357-432)||(42878732-42878806)
chr8 (364-434)||(45281096-45281166)
chr8 (373-434)||(42362668-42362728)
chr8 (269-434)||(22620022-22620191)
chr8 (348-417)||(4810621-4810691)
chr8 (364-434)||(14840807-14840877)
chr8 (360-434)||(38696446-38696520)
chr8 (269-434)||(42870953-42871119)
chr8 (264-411)||(6398323-6398471)
chr8 (386-434)||(42872120-42872168)
chr8 (349-434)||(24305180-24305266)
chr8 (364-434)||(30786815-30786885)
chr8 (364-410)||(37400942-37400988)
chr8 (237-282)||(22551298-22551343)
chr8 (314-433)||(6397921-6398041)
chr8 (351-418)||(13513571-13513638)
chr8 (351-418)||(13603104-13603171)
chr8 (360-410)||(32552457-32552507)
chr8 (364-434)||(44076269-44076339)
chr8 (269-358)||(28418948-28419037)
chr8 (364-412)||(14030478-14030526)
chr8 (264-308)||(37473703-37473747)
chr8 (264-308)||(37473811-37473855)
chr8 (264-308)||(37473919-37473963)
chr8 (354-410)||(39173277-39173333)
[»] chr3 (39 HSPs)
chr3 (268-432)||(35371048-35371212)
chr3 (268-434)||(10731940-10732106)
chr3 (268-429)||(26886416-26886576)
chr3 (270-432)||(41264468-41264628)
chr3 (236-434)||(53614053-53614250)
chr3 (270-432)||(3208625-3208788)
chr3 (267-434)||(34819094-34819262)
chr3 (268-432)||(27841518-27841685)
chr3 (269-427)||(46368953-46369110)
chr3 (360-434)||(38242419-38242493)
chr3 (269-434)||(13621058-13621223)
chr3 (269-434)||(49379840-49380005)
chr3 (237-434)||(53420455-53420655)
chr3 (355-435)||(10301071-10301151)
chr3 (355-424)||(10338886-10338955)
chr3 (351-435)||(14745095-14745179)
chr3 (357-432)||(3455526-3455600)
chr3 (304-432)||(53624210-53624338)
chr3 (317-410)||(37415157-37415252)
chr3 (314-394)||(53622830-53622910)
chr3 (371-434)||(48083365-48083428)
chr3 (269-435)||(53194425-53194591)
chr3 (314-410)||(44602901-44602997)
chr3 (269-358)||(50809563-50809652)
chr3 (269-358)||(50866210-50866299)
chr3 (313-418)||(24487176-24487280)
chr3 (351-434)||(42685014-42685097)
chr3 (315-406)||(54110143-54110233)
chr3 (390-431)||(11224776-11224817)
chr3 (269-358)||(50810719-50810808)
chr3 (269-358)||(50865056-50865145)
chr3 (335-411)||(11219588-11219664)
chr3 (364-432)||(12107887-12107954)
chr3 (271-358)||(43174593-43174679)
chr3 (350-428)||(7270467-7270546)
chr3 (348-410)||(28909498-28909561)
chr3 (314-432)||(21074137-21074256)
chr3 (396-436)||(28909546-28909586)
chr3 (281-386)||(40245745-40245852)
[»] chr7 (32 HSPs)
chr7 (270-432)||(32255131-32255290)
chr7 (237-434)||(13564020-13564216)
chr7 (268-429)||(22537703-22537862)
chr7 (268-434)||(11502235-11502398)
chr7 (308-434)||(44372867-44372994)
chr7 (308-434)||(44381723-44381850)
chr7 (277-433)||(22336119-22336274)
chr7 (270-434)||(43460636-43460800)
chr7 (268-410)||(46835838-46835980)
chr7 (313-434)||(43441484-43441605)
chr7 (351-435)||(35295836-35295920)
chr7 (314-434)||(16756009-16756128)
chr7 (360-434)||(39981455-39981529)
chr7 (313-434)||(41328357-41328478)
chr7 (316-434)||(30334503-30334619)
chr7 (364-434)||(40811459-40811529)
chr7 (269-432)||(47060288-47060452)
chr7 (364-434)||(669297-669366)
chr7 (365-434)||(46201269-46201338)
chr7 (360-427)||(2414890-2414957)
chr7 (313-410)||(48312202-48312300)
chr7 (349-434)||(47454474-47454559)
chr7 (237-421)||(25533339-25533523)
chr7 (348-411)||(4167609-4167672)
chr7 (379-434)||(15992273-15992328)
chr7 (314-434)||(47059247-47059371)
chr7 (349-434)||(47456276-47456361)
chr7 (269-411)||(26406283-26406425)
chr7 (364-434)||(40508516-40508586)
chr7 (397-434)||(22115105-22115142)
chr7 (397-434)||(40509675-40509712)
chr7 (371-411)||(10957070-10957110)
[»] chr5 (26 HSPs)
chr5 (268-434)||(30858982-30859148)
chr5 (268-430)||(30910885-30911048)
chr5 (268-434)||(22047872-22048038)
chr5 (270-432)||(36898791-36898957)
chr5 (268-433)||(11262532-11262705)
chr5 (269-434)||(9220270-9220438)
chr5 (313-434)||(1102756-1102877)
chr5 (298-417)||(4127089-4127214)
chr5 (298-421)||(13520640-13520764)
chr5 (267-434)||(39603993-39604158)
chr5 (317-435)||(10735900-10736018)
chr5 (364-434)||(27705223-27705293)
chr5 (364-432)||(1010274-1010341)
chr5 (364-432)||(8521394-8521461)
chr5 (357-432)||(1009325-1009399)
chr5 (335-430)||(15548381-15548478)
chr5 (294-434)||(22308636-22308777)
chr5 (360-434)||(324177-324251)
chr5 (313-434)||(325041-325164)
chr5 (319-384)||(11797395-11797461)
chr5 (313-411)||(223384-223484)
chr5 (348-411)||(7426799-7426862)
chr5 (364-434)||(33173867-33173938)
chr5 (343-401)||(17420474-17420531)
chr5 (264-364)||(22048942-22049043)
chr5 (371-411)||(28702729-28702769)
[»] chr2 (30 HSPs)
chr2 (268-434)||(18616817-18616982)
chr2 (268-434)||(29219525-29219689)
chr2 (268-434)||(29332824-29332988)
chr2 (268-432)||(1085198-1085363)
chr2 (269-435)||(8320894-8321064)
chr2 (270-434)||(42641672-42641838)
chr2 (241-432)||(34513336-34513529)
chr2 (270-432)||(32469290-32469452)
chr2 (313-434)||(4920916-4921036)
chr2 (269-391)||(35903719-35903844)
chr2 (269-434)||(28611066-28611230)
chr2 (335-434)||(43033219-43033319)
chr2 (313-434)||(43034336-43034448)
chr2 (366-434)||(11317277-11317345)
chr2 (364-420)||(35903659-35903715)
chr2 (364-434)||(6030377-6030447)
chr2 (267-434)||(17459393-17459565)
chr2 (239-434)||(34467644-34467848)
chr2 (273-354)||(7436685-7436766)
chr2 (389-430)||(16295150-16295191)
chr2 (264-407)||(7753334-7753477)
chr2 (348-411)||(7983590-7983653)
chr2 (364-427)||(11547806-11547868)
chr2 (348-430)||(30748621-30748704)
chr2 (360-410)||(23232330-23232380)
chr2 (337-434)||(25570753-25570851)
chr2 (364-434)||(34464106-34464176)
chr2 (367-404)||(16290705-16290742)
chr2 (294-424)||(30749161-30749293)
chr2 (241-282)||(34513108-34513149)
[»] chr6 (14 HSPs)
chr6 (269-434)||(17837755-17837920)
chr6 (269-430)||(29381542-29381703)
chr6 (268-429)||(18346563-18346722)
chr6 (268-434)||(5187433-5187599)
chr6 (269-429)||(23392358-23392520)
chr6 (269-434)||(11722924-11723090)
chr6 (298-434)||(7311565-7311702)
chr6 (269-434)||(11967354-11967523)
chr6 (269-358)||(232316-232405)
chr6 (389-432)||(12669863-12669906)
chr6 (269-344)||(1367567-1367642)
chr6 (269-358)||(233454-233543)
chr6 (336-429)||(7312923-7313016)
chr6 (399-435)||(32506969-32507005)
[»] scaffold0118 (1 HSPs)
scaffold0118 (268-434)||(43386-43551)
[»] chr4 (45 HSPs)
chr4 (268-430)||(7707732-7707893)
chr4 (267-434)||(2312295-2312458)
chr4 (272-434)||(44498599-44498762)
chr4 (269-434)||(56085485-56085650)
chr4 (268-432)||(23201987-23202150)
chr4 (269-434)||(26496122-26496287)
chr4 (310-431)||(34326868-34326989)
chr4 (313-425)||(36845557-36845669)
chr4 (337-434)||(27850816-27850915)
chr4 (313-434)||(52138648-52138771)
chr4 (360-434)||(52240016-52240090)
chr4 (294-434)||(13165633-13165774)
chr4 (269-412)||(1519970-1520114)
chr4 (314-433)||(49896441-49896561)
chr4 (313-432)||(40723367-40723484)
chr4 (313-432)||(26629931-26630049)
chr4 (269-408)||(27847841-27847979)
chr4 (298-434)||(19750135-19750272)
chr4 (298-434)||(19789534-19789671)
chr4 (371-434)||(4871632-4871695)
chr4 (371-434)||(11968650-11968713)
chr4 (314-410)||(23103866-23103962)
chr4 (313-411)||(38555134-38555234)
chr4 (364-432)||(1794553-1794621)
chr4 (366-434)||(15449984-15450052)
chr4 (269-434)||(41349339-41349506)
chr4 (348-428)||(7053321-7053402)
chr4 (348-432)||(28590795-28590880)
chr4 (314-410)||(45535207-45535303)
chr4 (313-434)||(1829891-1830009)
chr4 (353-434)||(53432200-53432281)
chr4 (345-428)||(56157384-56157468)
chr4 (364-434)||(8682756-8682826)
chr4 (364-434)||(6348292-6348362)
chr4 (264-374)||(392522-392633)
chr4 (345-428)||(36243663-36243747)
chr4 (277-408)||(37884098-37884230)
chr4 (364-434)||(33231528-33231597)
chr4 (368-434)||(42810115-42810181)
chr4 (364-434)||(53435661-53435731)
chr4 (397-434)||(4714158-4714195)
chr4 (269-326)||(40724729-40724786)
chr4 (371-411)||(35350024-35350064)
chr4 (351-411)||(38370441-38370501)
chr4 (371-411)||(39057683-39057723)
[»] scaffold0077 (1 HSPs)
scaffold0077 (267-434)||(53997-54161)
[»] scaffold0011 (1 HSPs)
scaffold0011 (313-434)||(127571-127692)
[»] scaffold0219 (1 HSPs)
scaffold0219 (269-434)||(8000-8168)
[»] scaffold2071 (1 HSPs)
scaffold2071 (237-427)||(461-652)
[»] scaffold0034 (1 HSPs)
scaffold0034 (361-432)||(108654-108725)
[»] scaffold0031 (2 HSPs)
scaffold0031 (300-435)||(124105-124240)
scaffold0031 (364-432)||(125138-125207)
[»] scaffold0013 (1 HSPs)
scaffold0013 (354-434)||(32708-32790)
[»] scaffold0201 (1 HSPs)
scaffold0201 (364-434)||(21265-21335)
[»] scaffold0128 (2 HSPs)
scaffold0128 (362-433)||(22119-22190)
scaffold0128 (243-282)||(23047-23086)
[»] scaffold0019 (1 HSPs)
scaffold0019 (240-318)||(62914-62992)


Alignment Details
Target: chr1 (Bit Score: 163; Significance: 7e-87; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 237 - 432
Target Start/End: Original strand, 16964902 - 16965101
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaa----gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttg 332  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  16964902 tgtgagttgaagatgatgaagatttataaggtagaaagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaatataaaatagacctg 16965001  T
Q  333 tgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
     ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16965002 cgtaatacaatggttctcttttaaaagaaaaaacaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 16965101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 16964663 - 16964805
Alignment:
Q  1 aggtttgataaagaattttttgaatttgttgttgt---tggattaacatcgatgatttattgctggattgttgggatgatgtgttgttcttggtgtattg 97  Q
    ||||||||||||||||||| || ||||||||||||   |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  16964663 aggtttgataaagaattttctggatttgttgttgtcgttggattaacatcgatgatttgttgctggattgttgggatgctgtgttgttcttggtgtattg 16964762  T
Q  98 ttgtgttattcaatgagaaatggagtgtagaagaagagagcag 140  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  16964763 ttgtgttattcaatgagaaatggagtgtagaagaatagagcag 16964805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 273 - 420
Target Start/End: Original strand, 46318435 - 46318582
Alignment:
Q  273 gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacgg 372  Q
    |||||||||||||||||| | |||||||||| ||||||||| ||||||||||||||| ||| ||||| ||||||||| ||  |||| ||| ||||||||     
T  46318435 gatgaagaaaaggaaaaaaagttaggtgttgctggtacatcataagataaaatagacatgtataatctaatggttcttttaaaaaaaaaagatcaaacga 46318534  T
Q  373 ttgaaattaaaataattaataggatctatggtggaccactcttaaagt 420  Q
    || ||||||||||| ||||||||||||||||||||||||||| |||||    
T  46318535 tttaaattaaaatatttaataggatctatggtggaccactctaaaagt 46318582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 268 - 424
Target Start/End: Complemental strand, 49801920 - 49801766
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||| ||  | |||||||||||| |||| | || ||||||||    
T  49801920 tagaagatgaagaaaatgaaaaaaatt-agatgttggtggtacatcgtaagataaaatagacctgcatgatccaatggttccctttaacaa-aaaaatca 49801823  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggt 424  Q
    ||||||| ||||||||||||||||||| || |||||||||||||| |||| ||||||    
T  49801822 aacggtttaaattaaaataattaatagaatttatggtggaccacttttaaggttggt 49801766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 335 - 428
Target Start/End: Complemental strand, 15232990 - 15232897
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  15232990 taatccaatggttctcttttaaaaaaaatatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccac 15232897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 434
Target Start/End: Complemental strand, 14478570 - 14478404
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| || || ||||| |||||   ||| |||||||| ||||||||    
T  14478570 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacacctgcgtaattcaatgaccctccttttaaaaaaaaaatca 14478471  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||| |||||| |||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  14478470 aacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccataga 14478404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 434
Target Start/End: Complemental strand, 48527790 - 48527672
Alignment:
Q  316 aagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactctt 415  Q
    ||||||||||| |||||  ||||||||||||  || ||||||| ||| ||||||| ||| |||||||||||||| ||| |||||||||||||||||||||    
T  48527790 aagataaaatacacttgcataatccaatggtcatcatttaaaaaaaagatcaaacagtttaaattaaaataattgataagatctatggtggaccactctt 48527691  T
Q  416 aaagttggtccaccataga 434  Q
    |||||||||| ||||||||    
T  48527690 aaagttggtcgaccataga 48527672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 52078003 - 52078122
Alignment:
Q  315 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactct 414  Q
    |||||||||||| ||||  |||||| |||||| ||| |||  || ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  52078003 taagataaaatacacttacgtaatctaatggtcctcctttttaaaaaaaatcaaacggttaaaattaaaataattaataggatctatggtgtatcactct 52078102  T
Q  415 taaagttggtccaccataga 434  Q
    ||| |||||| |||||||||    
T  52078103 taaggttggttcaccataga 52078122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 313 - 434
Target Start/End: Original strand, 9226071 - 9226193
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    ||||||||||||||||| || || ||  |||||||||||||||| | |||| |||||||  || ||||||||||||||||||||||||||||||||||||    
T  9226071 cgtaagataaaatagacatgcgtgatttaatggttctcttttaataaaaaagatcaaacaatttaaattaaaataattaataggatctatggtggaccac 9226170  T
Q  412 tcttaaagttggtccaccataga 434  Q
    | |||| |||| |||||||||||    
T  9226171 ttttaaggttgatccaccataga 9226193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 434
Target Start/End: Complemental strand, 51445918 - 51445728
Alignment:
Q  244 tgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaat 343  Q
    |||||||||||||||    | ||| |||||||||||||| ||| ||  | |||| ||||| ||   || |||||||||||||| || || ||||||||||    
T  51445918 tgaagatgatgaagaagggtgaggaagaagatgaagaaagggagaattaattagttgttgttgactcaccgtaagataaaatacacctgcgtaatccaat 51445819  T
Q  344 ggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |   ||| | |  || ||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  51445818 gaccctcctgtttaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagttgatccaccataga 51445728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 432
Target Start/End: Original strand, 48096890 - 48097008
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || | |||||||||||||| ||| |  |||| ||| |||||||| || | ||| ||||||||||||||||||||||| |||||||    
T  48096890 cgtaagataaaatacacctatgtaatccaatggtcctcgtaaaaaa-aaagatcaaacgattaatatttaaataattaataggatctatggtagaccact 48096988  T
Q  413 cttaaagttggtccaccata 432  Q
    ||||| ||||||||||||||    
T  48096989 cttaaggttggtccaccata 48097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 44999315 - 44999440
Alignment:
Q  311 atcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa--tcaaacggttgaaattaaaataattaataggatctatggtggac 408  Q
    ||||||||||| |||||||||| |||||||||||||  |||||| ||| || ||  ||||| |||| || ||||||||||||||| ||||||||||| ||    
T  44999315 atcgtaagatataatagacttgcgtaatccaatggtcatcttttgaaaaaacaagatcaaatggtttaagttaaaataattaataagatctatggtgaac 44999414  T
Q  409 cactcttaaagttggtccaccataga 434  Q
    ||||||||   |||||||||||||||    
T  44999415 cactcttacgattggtccaccataga 44999440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 432
Target Start/End: Original strand, 5612897 - 5613060
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| | | | ||| |||||| || | || | |||||||||||| ||||  |||||| ||||||  || ||||||||  | |||||    
T  5612897 agaagatgaagaaagggagacataattaagtgttgttgattcaccataagataaaatacacttacgtaatctaatggtcatccttttaaaaatataatca 5612996  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||||| || |||||||||    
T  5612997 aacggtttaaattaaaataattaataggatctatggtggatcact-ttaaaggtgatccaccata 5613060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 434
Target Start/End: Original strand, 45584913 - 45584985
Alignment:
Q  362 aaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||| || | |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  45584913 aaatcaaacgatttatattaaaataattaataggatctatggtggagcactcttaaagttgggccaccataga 45584985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 434
Target Start/End: Original strand, 9485149 - 9485282
Alignment:
Q  295 taggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaatag 394  Q
    |||||||||||||||||||||||||||||||| || || ||||  ||| |||  ||||| ||||  |||||| |    || |||||||||||||||||||    
T  9485149 taggtgttggtggtacatcgtaagataaaataaacatgcgtaactcaaaggtaatctttaaaaa--aaaatcga----tttaaattaaaataattaatag 9485242  T
Q  395 gatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||| ||||||  |||||||||||||||| |||||||||||    
T  9485243 gatttatggttaaccactcttaaagttgatccaccataga 9485282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 435
Target Start/End: Original strand, 10722233 - 10722355
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || | ||||||| |||||||||| ||| |||  |||||| || |||| ||||||||| ||||| ||| ||||||| |||||||||    
T  10722233 cgtaagataaaataaacctatgtaatctaatggttctcattttaaaataaaatctaaaggtttaaattaaaaaaattagtagaatctatgatggaccact 10722332  T
Q  413 cttaaagttggtccaccatagat 435  Q
    ||| | ||||||||| |||||||    
T  10722333 ctttaggttggtccatcatagat 10722355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 376 - 434
Target Start/End: Original strand, 13147336 - 13147394
Alignment:
Q  376 aaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  13147336 aaattaaaataattaataggatctatggtggaccactattaaggttggtccaccataga 13147394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 314 - 435
Target Start/End: Complemental strand, 13894872 - 13894751
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||| || || ||||| |||||||| | | ||||||| ||| ||||||||||| |||||||||||||||| |||||||||||| ||| |||    
T  13894872 gtaagataaaatacacatgcgtaattcaatggtttttcatttaaaaaaaagatcaaacggtttaaattaaaataattaacaggatctatggtagacaact 13894773  T
Q  413 cttaaagttggtccaccatagat 435  Q
    ||| | |||||| ||||||||||    
T  13894772 ctttaggttggt-caccatagat 13894751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 305 - 434
Target Start/End: Original strand, 35943295 - 35943425
Alignment:
Q  305 tggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttg-aaattaaaataattaataggatctatgg 403  Q
    |||| |||||||||||||||||||| || ||||| |||||||  || ||| ||| ||| |||||||||||  ||| ||||| | |||||| | |||||||    
T  35943295 tggttcatcgtaagataaaatagacctgcgtaattcaatggtcatcctttcaaaaaaagatcaaacggttttaaaataaaaaatttaataaggtctatgg 35943394  T
Q  404 tggaccactcttaaagttggtccaccataga 434  Q
    |||| ||||||||| ||||||||||||||||    
T  35943395 tggatcactcttaaggttggtccaccataga 35943425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 241 - 434
Target Start/End: Complemental strand, 46467477 - 46467284
Alignment:
Q  241 agttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatcc 340  Q
    ||||||||||||||||||||  ||||||||||||||||||||   | ||| | |||| ||||| |||| || |||||| || |||||||  || |||| |    
T  46467477 agttgaagatgatgaagattagtaaggtagaagatgaagaaagaaagaaagaattagttgttgttggtgcaccgtaagttacaatagacacgtataattc 46467378  T
Q  341 aatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||  || ||||| || | | ||||||||||| ||||||||| | ||||||  ||||| |||||| |||| |||| ||||||||||||||||    
T  46467377 aatggtcatctttttagaaaatatatcaaacggtttaaattaaaa-atttaataacatctacggtggatcacttttaatgttggtccaccataga 46467284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 434
Target Start/End: Complemental strand, 26802178 - 26802078
Alignment:
Q  335 taatccaatggttctcttttaaaagaaa-aatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatag 433  Q
    ||||| |||||| ||||||||||| ||| |||||||||||| |||||||||| ||||||| ||||||| |||||| |||||||| |||||| |||| |||    
T  26802178 taatcaaatggtcctcttttaaaaaaaataatcaaacggtttaaattaaaatgattaatatgatctatagtggacaactcttaaggttggttcaccttag 26802079  T
Q  434 a 434  Q
    |    
T  26802078 a 26802078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 376 - 434
Target Start/End: Original strand, 3617417 - 3617475
Alignment:
Q  376 aaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  3617417 aaattaaaataattaataggatctatagtggaccactcttaaggttggttcaccataga 3617475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 434
Target Start/End: Original strand, 6049267 - 6049403
Alignment:
Q  299 tgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggat 397  Q
    ||||| |||| ||| |||||||| | ||||| ||  | ||| |||||| ||||||||| | |||| ||||| ||||| |||||||||||||||| |||||    
T  6049267 tgttgttggttcattgtaagatacagtagacatgcatgatctaatggtcctcttttaataaaaaatatcaatcggtttaaattaaaataattaacaggat 6049366  T
Q  398 ctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||| ||||||||||| || |  |||||||||||||||    
T  6049367 ctacggtggaccactatttagattggtccaccataga 6049403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 432
Target Start/End: Complemental strand, 26286715 - 26286552
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| | | | |||||| ||| || | || |||| ||||||||| ||||  |||||| ||||||  || ||||||||  | |||||    
T  26286715 agaagatgaagaaagggagacataattaggttttgttgattcaccgtacgataaaatacacttacgtaatctaatggtcatccttttaaaaatataatca 26286616  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||| |||||| || |||||||||    
T  26286615 aacggtttaaattaaaataattaatagagtctatggtggatcact-ttaaaggtgatccaccata 26286552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 434
Target Start/End: Original strand, 24517428 - 24517595
Alignment:
Q  269 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatc 366  Q
    ||||||||||||||| | | ||| | |||||||||| |||| || | | ||||| ||||||| ||  ||||| |||||| ||||||| ||| ||| ||||    
T  24517428 agaagatgaagaaaatgtacaaaaaattaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctctttttaaaaaaataatc 24517527  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||| |||| ||||| ||||||| ||||||| |||||| |||||||| ||| || |||| ||||    
T  24517528 aaacggtttaaataaaaatgattaatatgatctatagtggacaactcttaatgttagttcaccttaga 24517595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 435
Target Start/End: Complemental strand, 46110543 - 46110418
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctct---tttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacc 409  Q
    ||||||||| ||||||||||| | ||| || ||| | ||   ||||||| ||| ||||||||||| ||||||| | |||||||| | |||| | ||||||    
T  46110543 cgtaagatataatagacttgtatgatctaacggtccactttctttaaaaaaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggacc 46110444  T
Q  410 actcttaaagttggtccaccatagat 435  Q
    |||||||| |||||||||||||||||    
T  46110443 actcttaaggttggtccaccatagat 46110418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 435
Target Start/End: Complemental strand, 10712047 - 10711925
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || | ||||||| |||||||||| ||| |||  |||||| || |||| ||||||||| ||||| ||| || |||| |||||||||    
T  10712047 cgtaagataaaataaacctatgtaatctaatggttctcattttaaaataaaatctaaaggtttaaattaaaaaaattagtagaatttatgatggaccact 10711948  T
Q  413 cttaaagttggtccaccatagat 435  Q
    ||| | ||||||| | |||||||    
T  10711947 ctttaggttggtctatcatagat 10711925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 15072647 - 15072768
Alignment:
Q  315 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa--tcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||||| ||||||||| || ||||  ||||||| | |||||  ||||||  || ||||||| | |||||||||  |||| |||||||||||    
T  15072647 taagataaaatagacctgtgtaatcaaagggttaccttttaataaaaaaagatcaaacaatttaaattaagaaaattaatagagtctacggtggaccact 15072746  T
Q  413 cttaaagttggtccaccataga 434  Q
    ||| | ||||||||||||||||    
T  15072747 ctttaggttggtccaccataga 15072768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 15746675 - 15746744
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| |||| ||||||||| | ||||||||||||||||||||||||||||||  |||||||||||||||    
T  15746675 atcaaagggttaaaattaaaaga-ttaataggatctatggtggaccactcttaagattggtccaccataga 15746744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 23091679 - 23091569
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaagga-aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 335  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||   | |||| | |||| ||||| |||||||||||||| || |||||||  || |    
T  23091679 tgtgagttgaagatgatgaagattattaaggtagaagatgaagaaagaaataaaagaattagttgttgttggtacatcgtaagttacaatagacacgtat 23091580  T
Q  336 aatccaatggt 346  Q
    ||| |||||||    
T  23091579 aattcaatggt 23091569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 40109638 - 40109509
Alignment:
Q  294 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa--atcaaacggttgaaattaaaataattaa 391  Q
    |||||||||| |||| || | | ||||| ||||||| ||  ||||| |||||| ||||||| ||| ||||  ||||||||||| |||| ||||| |||||    
T  40109638 ttaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctctttttaaaaaaaataatcaaacggtttaaataaaaatgattaa 40109539  T
Q  392 taggatctatggtggaccactcttaaagtt 421  Q
    || ||||||| |||||| ||||||||||||    
T  40109538 tatgatctatagtggacaactcttaaagtt 40109509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 410
Target Start/End: Original strand, 7306116 - 7306209
Alignment:
Q  318 gataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    |||||||||||  ||||||||| | |||| ||||||||||| ||| ||||||| || | ||||||||| |||||||| ||||||||||||||||    
T  7306116 gataaaatagaaatgtgtaatcaattggtcctcttttaaaaaaaacaatcaaatggctaaaattaaaagaattaataagatctatggtggacca 7306209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 434
Target Start/End: Original strand, 18821632 - 18821717
Alignment:
Q  350 cttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||| |||| ||||||||||| || || ||| |||||||||||||| |||| |||||||||||| ||| ||||||||||||    
T  18821632 cttttaaaacaaaagatcaaacggttaaattttaaaaaattaataggatctttggtagaccactcttaaggttagtccaccataga 18821717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 428
Target Start/End: Complemental strand, 9482646 - 9482599
Alignment:
Q  381 aaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  9482646 aaaataattaataagatctatggtgaaccactcttaaagttggtccac 9482599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 41873879 - 41873949
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||||| ||| |||||||    ||||||||||||||||||||| ||||||||||||||||    
T  41873879 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccaccataga 41873949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 417
Target Start/End: Complemental strand, 12665998 - 12665945
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaa 417  Q
    ||||||||||| ||||||| | |||||||| |||||||||||||||||||||||    
T  12665998 atcaaacggtttaaattaacaaaattaataagatctatggtggaccactcttaa 12665945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 410
Target Start/End: Complemental strand, 27556527 - 27556431
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||  |  ||||||||| ||| | ||||||||  ||| ||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  27556527 gtaagataaaatagacacgcttaatccaatagttattcttttaaattaaagatcaaactgtttaaattaaaa-aattaataggatctatggtggacca 27556431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 434
Target Start/End: Original strand, 46111395 - 46111474
Alignment:
Q  355 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||| ||||||||||| ||| | ||||| | |||||||| |||||||  ||||||||| ||||||||| |||||||||||    
T  46111395 aaaaaaaaaatcaaacagttaagattaacacaattaataagatctatcatggaccacttttaaagttgatccaccataga 46111474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 434
Target Start/End: Complemental strand, 27814504 - 27814430
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| |||||||| ||||||| | |||||||| | | || | ||||||||| |||||||||||||||||||||    
T  27814504 aaaaatgaaacggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccataga 27814430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 370
Target Start/End: Original strand, 42245778 - 42245872
Alignment:
Q  273 gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaac 370  Q
    ||||||||||||| |||| | |||| |||||||||||||| |||| ||||||||||||  |||||| ||||||| ||| ||||| | ||| |||||||    
T  42245778 gatgaagaaaagggaaaaaaattagatgttggtggtacat-gtaaaataaaatagact--tgtaattcaatggtcctcctttaacaaaaagatcaaac 42245872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 23091527 - 23091490
Alignment:
Q  397 tctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||||||||| |||||||||||||||||||||    
T  23091527 tctatggtggaccacttttaaagttggtccaccataga 23091490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 428
Target Start/End: Complemental strand, 28050529 - 28050465
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    ||||||||||| || |||| | ||| |||||||||||||||||| |||||||||  |||||||||    
T  28050529 atcaaacggttaaagttaagaaaatcaataggatctatggtggaacactcttaagattggtccac 28050465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 411
Target Start/End: Complemental strand, 51299584 - 51299441
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| || |||| ||||| ||||||||| | ||  |||||||| |||||||  |  | |||||||| ||||| |||||||  ||| ||||    
T  51299584 agaagatgaagaaaggggaaaaaatttaagtgttggtgattcactgtaagatacaatagaccagcatgatccaatgattctcattttaaataaaagatca 51299485  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    || |||| |||||||||   || ||| | |||||||||||||||    
T  51299484 aagggtttaaattaaaaagttttataaggtctatggtggaccac 51299441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 16123632 - 16123587
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaa 282  Q
    |||||||||||||||||||||||   |||||||||||| |||||||    
T  16123632 tgtgagttgaagatgatgaagatcggtaaggtagaagacgaagaaa 16123587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 34350288 - 34350251
Alignment:
Q  397 tctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  34350288 tctatggtggaccactcttaaggttgatccaccataga 34350251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 51300168 - 51300233
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    |||||| |||| ||||| | | |||||||| | |||||||||||||||| |||| |||||||||||    
T  51300168 atcaaatggttaaaattcataaaattaataaggtctatggtggaccacttttaatgttggtccacc 51300233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 434
Target Start/End: Original strand, 14477601 - 14477769
Alignment:
Q  269 agaagatgaagaaaa-ggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggt-tctctttt-aaaagaaaaat 365  Q
    ||||||||||||||| ||| ||| | |||||||||| |    || |||||||||||||| |  |||||||||||||| |   |||||| |||||| | ||    
T  14477601 agaagatgaagaaaatggagaaataattaggtgttgtttcctcaccgtaagataaaatacatatgtgtaatccaatgatcattcttttaaaaagacatat 14477700  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||| ||||| ||| |||||||    |||||||||||| ||||||||  ||| || ||||||||    
T  14477701 caaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatctaccataga 14477769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 434
Target Start/End: Original strand, 34351875 - 34351942
Alignment:
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||| |||| |||||| ||  ||||||| | | ||||||||||||||||| ||||||||||||||||||    
T  34351875 caaagggttaaaattagaaatattaataaggtttatggtggaccactctt-aagttggtccaccataga 34351942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 268 - 434
Target Start/End: Original strand, 32695087 - 32695251
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  32695087 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtatatcgtaagataaaatagacttgtctaatccaatggttctcttttaaaa-aaaaatca 32695184  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||||| |||||||||    
T  32695185 aacggtttaaattaaaataattaataggatctatggtggaccaatcttaagattggttcaccataga 32695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 272 - 434
Target Start/End: Original strand, 24192478 - 24192641
Alignment:
Q  272 agatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaaaatcaaac 370  Q
    ||||||||||||| ||||| | ||||||||||||| |||||| ||| ||||||||||| || |||||| |||||||||||||||| || |||||||||||    
T  24192478 agatgaagaaaagtaaaaaaaattaggtgttggtgatacatcctaaaataaaatagacatgcgtaatctaatggttctcttttaagaaaaaaaatcaaac 24192577  T
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24192578 ggttttaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataga 24192641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 434
Target Start/End: Original strand, 20180525 - 20180652
Alignment:
Q  308 tacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtgg 406  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  20180525 tacatcctaagataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtgg 20180624  T
Q  407 accactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||| |||||| |||||    
T  20180625 accactcttaatgttagtccactataga 20180652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 17455322 - 17455184
Alignment:
Q  297 ggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaatagga 396  Q
    |||||| |||||||||||||||||||||||||| || |||||| |||||| ||||||||||| | | || |||||||| |||||||||||||||||| ||    
T  17455322 ggtgttagtggtacatcgtaagataaaatagacctgcgtaatctaatggtcctcttttaaaaaatagataaaacggttcaaattaaaataattaataaga 17455223  T
Q  397 tctatggtggaccactcttaaagttggtccaccatagat 435  Q
    |||||||||||||||| ||||  |||||| | |||||||    
T  17455222 tctatggtggaccacttttaagattggtctagcatagat 17455184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 335 - 428
Target Start/End: Original strand, 13117511 - 13117604
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  13117511 taatccaatggttctcttttaaaaaaaacatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccac 13117604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 270 - 434
Target Start/End: Original strand, 32798344 - 32798509
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaa 368  Q
    |||||||||||||| |||||| | ||| ||| || |||| || |||||||||||||| || |  | ||||||  ||| ||| ||| |||||||| |||||    
T  32798344 gaagatgaagaaaaagaaaaaaagttaagtggtgatggttcaacgtaagataaaatacacctacgcaatccagcggtcctccttttaaagaaaagatcaa 32798443  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  32798444 acggtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccataga 32798509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 313 - 434
Target Start/End: Original strand, 9854735 - 9854857
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    |||||||||||| | || || |||||||||||   || ||||||||| |||||||||| |||| |||||| || ||||||||||||||||||||||||||    
T  9854735 cgtaagataaaacacacatgcgtaatccaatgacccttcttttaaaaaaaaaatcaaatggtttaaattagaagaattaataggatctatggtggaccac 9854834  T
Q  412 tcttaaagttggtccaccataga 434  Q
    |||||||||||||||||||||||    
T  9854835 tcttaaagttggtccaccataga 9854857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 434
Target Start/End: Original strand, 8571394 - 8571594
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaagga-aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 335  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||   | |||| | |||| ||||| |||||||||||||| || |||||||  || |    
T  8571394 tgtgagttgaagatgatgaagattattaaggtagaagatgaagaaagaaataaaagaattagttgttgttggtacatcgtaagttacaatagacacgtat 8571493  T
Q  336 aatccaatgg---ttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||||||||   |||| |||||| | | | ||||||| ||| |||||||||   |||||| | | |||||||||||| | |||||||||||||||||||    
T  8571494 aatccaatggtcattct-ttttaagaaacagatcaaacagtttaaattaaaaagtttaataaggtatatggtggaccatttttaaagttggtccaccata 8571592  T
Q  433 ga 434  Q
    ||    
T  8571593 ga 8571594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 42098776 - 42098706
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 430  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  42098776 aaaaatcaaacggttgaaattaaagtaattaataggatctatggtggaccacttttaaggttggtccacca 42098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 434
Target Start/End: Original strand, 31845652 - 31845772
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || |  |||||| ||||||  || ||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  31845652 cgtaagataaaatacacctacgtaatctaatggtcatcctttaaaaaaaagatcaaacagtttacattaaaataattaataggacctatggtggaccact 31845751  T
Q  413 cttaaagttggtccaccataga 434  Q
    ||| |||||||| |||||||||    
T  31845752 ctt-aagttggttcaccataga 31845772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 270 - 425
Target Start/End: Original strand, 40437409 - 40437565
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa---tc 366  Q
    |||||||||||||||| |||| | ||||| |||||| |||||||||| | |||||||||| || || ||| |||| |  |||||||||| || ||   ||    
T  40437409 gaagatgaagaaaagggaaaaaagttaggcgttggttgtacatcgtagg-taaaatagacatgcgtgatctaatg-tcatcttttaaaaaaataaatatc 40437506  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtc 425  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  40437507 aaacagtttaaattaaaataattaataggatctacggtggaccacttttaaggttggtc 40437565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 10669353 - 10669423
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||    
T  10669353 atcaatcggtttaaattaaaatatttaataggatctatggtggaccactcttaaggttggttcaccataga 10669423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 42877825 - 42877758
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  42877825 atcaaagggttgaaattaaa-taattaataggatctatggtggaccattcttaaggttggtccaccata 42877758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 43202313 - 43202233
Alignment:
Q  355 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagat 435  Q
    |||| ||||||||||| ||| ||||| |||||| ||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  43202313 aaaaaaaaaatcaaacagtttaaatttaaataactaataggatctatggtggaccactcttaaggttgatccactatagat 43202233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 42878732 - 42878806
Alignment:
Q  357 aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| |||||| |||| | |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  42878732 aagaaagatcaaagggttaagattaaa-taattaataggatctatggtggaccacacttaaggttggtccaccata 42878806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 45281096 - 45281166
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| |||||||||  ||||||||||| |||||| |||||||||||| ||||||||||| ||||    
T  45281096 atcaaacggtttaaattaaaaatattaataggatttatggtagaccactcttaaggttggtccaccgtaga 45281166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 434
Target Start/End: Original strand, 42362668 - 42362728
Alignment:
Q  373 ttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  42362668 ttgaaattaaaa-aattaataggatctatgatgaaccactcttaatgttggtccaccataga 42362728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 434
Target Start/End: Complemental strand, 22620191 - 22620022
Alignment:
Q  269 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa--- 364  Q
    ||||||||||||||| | | ||| | |||||||||| |||| || | | ||||| ||||||| ||  ||||| |||||| ||||||||||| |||||       
T  22620191 agaagatgaagaaaatgtacaaaaaattaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctcttttaaaaaaaaaaaaa 22620092  T
Q  365 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||| |||| ||||| ||||||| |||||||  |||||  ||||||||||| || |||| ||||    
T  22620091 tcaaacggtttaaataaaaatgattaatatgatctataatggacagctcttaaagttagttcaccttaga 22620022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 4810691 - 4810621
Alignment:
Q  348 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaa 417  Q
    ||||||||| | |||| ||||||| ||| |||||||||  |||||||||||||||||||||||||||||||    
T  4810691 ctcttttaataaaaaagatcaaacagtttaaattaaaaatattaataggatctatggtggaccactcttaa 4810621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 14840807 - 14840877
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||||||||| | |||||| || |||||||||| |||| |||| ||||||||||||||||    
T  14840807 atcaaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttggtccaccataga 14840877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 434
Target Start/End: Complemental strand, 38696520 - 38696446
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||| |||| |||||| || |||||||  |||||||||||||||||| |||| ||||||| ||||||||    
T  38696520 aaaaatcaaagggttaaaattataaaaattaattagatctatggtggaccacttttaaggttggtctaccataga 38696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 434
Target Start/End: Complemental strand, 42871119 - 42870953
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| ||| | |||||||||| ||   |   ||||||||||||| || || ||||| |||||||  || |||||||| | | ||||    
T  42871119 agaagatgaagaaagggagaaataattaggtgttgttgactcgcggtaagataaaatacacatgcgtaattcaatggtcatccttttaaaacacagatca 42871020  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||| |||||| || | |||||| | |||| ||||||||||||||||  ||||||||| |||||    
T  42871019 aacggtttaaattacaaaatttaataaggtctacggtggaccactcttaagattggtccacaataga 42870953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 411
Target Start/End: Original strand, 6398323 - 6398471
Alignment:
Q  264 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatgg------ttctcttttaaa 357  Q
    |||| |||||||||||||||||||| | | |||||||||| || | || ||||||||||| |||||||   |||||||||||      ||||||||        
T  6398323 aaggaagaagatgaagaaaaggaaataaaattaggtgttgttgattcaccgtaagataaagtagacttacataatccaatggtaagtattctcttt---- 6398418  T
Q  358 agaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    | ||||||||||||||| ||||||||| |||||||| | |||| ||||||||||    
T  6398419 ataaaaatcaaacggtttaaattaaaa-aattaataaggtctacggtggaccac 6398471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 42872120 - 42872168
Alignment:
Q  386 aattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  42872120 aattaataggatctatggtagaccactcttaaggttggtctaccataga 42872168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 434
Target Start/End: Complemental strand, 24305266 - 24305180
Alignment:
Q  349 tcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||| |||| ||||||  |||||| || ||| ||||||||||||||| | | || ||||||||| ||||||||||||||||    
T  24305266 tcttttaaaacaaaagatcaaatagttgaagtttaaaaaattaataggatctaagatagatcactcttaatgttggtccaccataga 24305180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 434
Target Start/End: Complemental strand, 30786885 - 30786815
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||||||| | |||||||| | | |||| ||||||||| ||||||||| |||||||||||    
T  30786885 atcaaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccataga 30786815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 410
Target Start/End: Complemental strand, 37400988 - 37400942
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||    
T  37400988 atcaaacggtttatattaaaaaaattaataggatctatggtggacca 37400942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 22551343 - 22551298
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaa 282  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||    
T  22551343 tgtgagttaaagatgatgaagattagtaaggtagaagatgaagaaa 22551298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 433
Target Start/End: Complemental strand, 6398041 - 6397921
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||| | |||||||||| |||| |  || |||| ||| | | |||||| |||| ||||||||| |||||||| | ||||||||||||||||    
T  6398041 gtaagataaaatacatttgtgtaatcaaatgatcatcctttttaaaaacagatcaaatggtttaaattaaaaaaattaataaggtctatggtggaccact 6397942  T
Q  413 cttaaagttggtccaccatag 433  Q
     | || ||||||  |||||||    
T  6397941 gtaaaggttggtttaccatag 6397921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 418
Target Start/End: Complemental strand, 13513638 - 13513571
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaa 418  Q
    |||||||  |||||||||| |||| ||||||||| |||||||| | | |||||||||||||| |||||    
T  13513638 ttttaaagaaaaaatcaaatggttaaaattaaaaaaattaataaggtatatggtggaccacttttaaa 13513571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 418
Target Start/End: Complemental strand, 13603171 - 13603104
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaa 418  Q
    |||||||  |||||||||| |||| ||||||||| |||||||| | | |||||||||||||| |||||    
T  13603171 ttttaaagaaaaaatcaaatggttaaaattaaaaaaattaataaggtatatggtggaccacttttaaa 13603104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 32552507 - 32552457
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||| ||||||||| |||||||| | | ||||||||||||    
T  32552507 aaaaatcaaacggttaaaattaaaagaattaataaggtttatggtggacca 32552457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 44076269 - 44076339
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| |||| ||||||||| |||||||| ||| ||||||||| || | |||| |||| |||||||||||    
T  44076269 atcaaatggtttaaattaaaaaaattaataagatttatggtggatcatttttaatgttgttccaccataga 44076339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 28419037 - 28418948
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||| | || |||||||||||||| || |||||||    
T  28419037 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaataggcatgcgtaatccaatggttttcctttaaaa 28418948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 412
Target Start/End: Complemental strand, 14030526 - 14030478
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||| | ||||||| || ||||||||||||| ||||||||||    
T  14030526 atcaaacggtttatattaaaaaaaataataggatctatagtggaccact 14030478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 37473703 - 37473747
Alignment:
Q  264 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggt 308  Q
    |||| |||||||||||||| ||||||| | |||||||||||||||    
T  37473703 aaggaagaagatgaagaaagggaaaaaaaattaggtgttggtggt 37473747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 37473811 - 37473855
Alignment:
Q  264 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggt 308  Q
    |||| |||||||||||||| ||||||| | |||||||||||||||    
T  37473811 aaggaagaagatgaagaaagggaaaaaaaattaggtgttggtggt 37473855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 37473919 - 37473963
Alignment:
Q  264 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggt 308  Q
    |||| |||||||||||||| ||||||| | |||||||||||||||    
T  37473919 aaggaagaagatgaagaaagggaaaaaaaattaggtgttggtggt 37473963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 39173333 - 39173277
Alignment:
Q  354 taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||| ||| ||||||||||| ||||||||| |||||||| | | ||||||||||||    
T  39173333 taaaaaaaagatcaaacggttaaaattaaaagaattaataaggtttatggtggacca 39173277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 5e-60; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 268 - 432
Target Start/End: Complemental strand, 35371212 - 35371048
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt-aaaagaaaaatc 366  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| |||||||    
T  35371212 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacttgcctaatccaatggttctctttttaaaaaaaaaatc 35371114  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35371113 aaaaagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccata 35371048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 268 - 434
Target Start/End: Original strand, 10731940 - 10732106
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| | ||||||||||||| ||| || ||||||||||||||||||  ||||||||||||||| | |||||||||||||||    
T  10731940 tagaagatgaagaaaaggaaaaaaaattaggtgttggtgatacttcttaagataaaatagacttgcctaatccaatggttctttgttaaaagaaaaatca 10732039  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  10732040 aacggtcgaaattaaaataattaataggatctatggtggaccgctctaaaggttggtccaccataga 10732106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 268 - 429
Target Start/End: Complemental strand, 26886576 - 26886416
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||    
T  26886576 tagaagatgaagaaaatgaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacatgcataatccaatggttcccttttaaaaaaaaaatca 26886478  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  26886477 aacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcacc 26886416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 270 - 432
Target Start/End: Original strand, 41264468 - 41264628
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 369  Q
    ||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||| ||||||||||    
T  41264468 gaagatgaagaaaagaaaaaaa--ttaggtgttggtggtacatcgtaagataaaatagacctgcttaattcaatggttctctttttaaaaaaaaatcaaa 41264565  T
Q  370 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  41264566 cggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatgatccaccata 41264628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 236 - 434
Target Start/End: Original strand, 53614053 - 53614250
Alignment:
Q  236 gtgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 335  Q
    |||||||||||||||||||||||||  ||| | |||||||||||||| ||||||  ||| |||||||||| ||||||| |||| |||||||  | ||| |    
T  53614053 gtgtgagttgaagatgatgaagattattaaaggagaagatgaagaaagggaaaataatt-aggtgttggtagtacatcataagctaaaataagcatgtct 53614151  T
Q  336 aatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||| |||||||||||||| ||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | || |||||||||||    
T  53614152 aatctaatggttctctttttaaaaaataatctaacggttgaaattaaaataattactaggatctatggtggaccactcttaaggatgatccaccataga 53614250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 270 - 432
Target Start/End: Complemental strand, 3208788 - 3208625
Alignment:
Q  270 gaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaaga-aaaatca 367  Q
    ||||||||||||||||||||| |  |||||||||| ||||||||||||||||||| ||||||||  || |||||||||||| |||| ||| | |||||||    
T  3208788 gaagatgaagaaaaggaaaaaaaaattaggtgttgatggtacatcgtaagataaattagacttgccta-tccaatggttctatttttaaaaataaaatca 3208690  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  3208689 aacggtttaaattataataattaataggatttatggtggaccactcttaaggttggtccaccata 3208625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 267 - 434
Target Start/End: Original strand, 34819094 - 34819262
Alignment:
Q  267 gtagaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaat 365  Q
    |||||||||||||||||| ||||| |  |||||||||||||||||| | ||||||||||||||||||  ||||||||||||||| |||| | | |||||     
T  34819094 gtagaagatgaagaaaagaaaaaaaaaattaggtgttggtggtacaccataagataaaatagacttgcctaatccaatggttctttttttataaaaaaaa 34819193  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||| ||||| |||||    
T  34819194 caaacagtttaaattaaaataagtaataggatctatggtggaccactcttaaggttgatccactataga 34819262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 268 - 432
Target Start/End: Original strand, 27841518 - 27841685
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc--ttttaaaagaaaaa 364  Q
    |||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||  ||||      ||||    
T  27841518 tagaagatgaagaaaaagaaaaaaaaattaggtgttggtggtacatcgtaagataaaatagacttgcctaatccaatagttctcttttttttttttaaaa 27841617  T
Q  365 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  27841618 tcaaacagttaaaattaaaataattattaggatctatggtggaccactcttaaggttggtccaccata 27841685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 269 - 427
Target Start/End: Complemental strand, 46369110 - 46368953
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    ||||||||| |||||| ||||| | ||| |||||||||||||||||||||||||||||||  | ||||||| ||||||||||| |||||| || ||| ||    
T  46369110 agaagatgatgaaaagaaaaaaaagttacgtgttggtggtacatcgtaagataaaatagatatttgtaatctaatggttctctcttaaaa-aataataaa 46369012  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtcca 427  Q
    | | || |||||||||||||||||| ||| ||||||||| ||||||| |||||| ||||    
T  46369011 atgatttaaattaaaataattaatatgatatatggtggaacactctttaagttgatcca 46368953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 38242419 - 38242493
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  38242419 aaaaatcaaacggtttaaattaaaataattaatagaatttatggtggaccactcttaaggttggtccaccataga 38242493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 269 - 434
Target Start/End: Complemental strand, 13621223 - 13621058
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| |  || |||||||||||   ||| ||| ||| |||||| ||    
T  13621223 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacatctgcgtaatccaatgaccctccttttaaaaaaaaattaa 13621124  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| |||||| |||||||||||||||||||||||||||| | || |||| |||||||||||||    
T  13621123 acggtttaaattagaataattaataggatctatggtggaccattttttaagtcggtccaccataga 13621058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 269 - 434
Target Start/End: Complemental strand, 49380005 - 49379840
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| |  || |||||||||||   ||| ||| ||| ||| |||||    
T  49380005 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacatctgcgtaatccaatgaccctccttttaaaaaaatatcaa 49379906  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    || ||| |||||| |||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  49379905 acagtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccataga 49379840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 434
Target Start/End: Complemental strand, 53420655 - 53420455
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaagga-aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 335  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||   | |||| | |||| ||||| |||||||||||||| || |||||||  || |    
T  53420655 tgtgagttgaagatgatgaagattattaaggtagaagatgaagaaagaaataaaagaattagttgttgttggtacatcgtaagttacaatagacacgtat 53420556  T
Q  336 aatccaatggt--tctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatag 433  Q
    |||  ||||||  | | |||||| | | | ||||||| ||| |||||||||   |||||| | ||||||||||| |||| ||||||||||||||||||||    
T  53420555 aatttaatggtcattttttttaagaaacagatcaaacagtttaaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatag 53420456  T
Q  434 a 434  Q
    |    
T  53420455 a 53420455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 10301151 - 10301071
Alignment:
Q  355 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagat 435  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  10301151 aaaaaaaaaatcaaacagtttaaattaaaataattaataggatctatggtggatcactcttaaggttggttcaccatagat 10301071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 355 - 424
Target Start/End: Complemental strand, 10338955 - 10338886
Alignment:
Q  355 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggt 424  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10338955 aaaaaaaaaatcaaacagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggt 10338886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 351 - 435
Target Start/End: Original strand, 14745095 - 14745179
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagat 435  Q
    |||||||| | | ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  14745095 ttttaaaatatagatcaaacagtttaaattaaaataattaataggatctatggtgaaccactcttaaggttggtccaccacagat 14745179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 3455526 - 3455600
Alignment:
Q  357 aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| |||||| |||||| |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  3455526 aagaaagatcaaagggttgagattaaa-taattaatatgatctatggtggaccactcttaaggttggtccaccata 3455600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 432
Target Start/End: Original strand, 53624210 - 53624338
Alignment:
Q  304 gtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatg 402  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||| | ||| ||| |||||| |||| ||||| ||| |||||||| | ||||||    
T  53624210 gtggtacatcgtaagataaaatagacacgtgtaatccaacggttctctttcttaaaaaaagatcaaaaggttaaaattgaaa-aattaataaggtctatg 53624308  T
Q  403 gtggaccactct-taaagttggtccaccata 432  Q
    |||||| | ||| ||| ||||||||||||||    
T  53624309 gtggacta-tctataatgttggtccaccata 53624338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 410
Target Start/End: Complemental strand, 37415252 - 37415157
Alignment:
Q  317 agataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa--atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    |||||||||| || |||||||| ||||||| ||||||||||| ||||  ||  ||||||| ||||||||| |||||||| ||||||||||||||||    
T  37415252 agataaaataaacatgtgtaattcaatggtcctcttttaaaaaaaaacaatttaacggttaaaattaaaagaattaataagatctatggtggacca 37415157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 394
Target Start/End: Complemental strand, 53622910 - 53622830
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaatag 394  Q
    |||||||||||||||| || |||||||||| || ||| ||||||| || |||||||||||| ||||||||| |||||||||    
T  53622910 gtaagataaaatagacatgcgtaatccaatcgtactcctttaaaataagaatcaaacggtttaaattaaaacaattaatag 53622830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 371 - 434
Target Start/End: Complemental strand, 48083428 - 48083365
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| ||| || |||||||||    
T  48083428 ggtttaaattaaaataattaataggatctatggtagaccactcttaaggttagtgcaccataga 48083365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 435
Target Start/End: Original strand, 53194425 - 53194591
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||||||  | ||| |||||  |||| |||||||||||| |||| || || || ||| || | |  || ||| ||| ||| |||||    
T  53194425 agaagatgaagaaagggaaaaggaattaagtgttcatggttcatcgtaagatagaatacacatgcgtgatctaacgatcttcattttaaaaaaagatcaa 53194524  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagat 435  Q
    |||||| ||| ||||||||||||||| |||||||||||| |||| ||||  || ||| |||||||||    
T  53194525 acggtttaaaataaaataattaatagaatctatggtggatcacttttaagatttgtctaccatagat 53194591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 410
Target Start/End: Original strand, 44602901 - 44602997
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||  | |||||||||| ||| || ||| ||| |||| ||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  44602901 gtaagataaaatagacacgcgtaatccaatagttatccttttaaataaaagatcaaacggtttaaattaaaa-aattaataggatctatggtagacca 44602997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 50809652 - 50809563
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || |||||||||||||||||||||||||    
T  50809652 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcttttaaaa 50809563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 50866210 - 50866299
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || |||||||||||||||||||||||||    
T  50866210 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcttttaaaa 50866299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 418
Target Start/End: Original strand, 24487176 - 24487280
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||||||  ||  ||||| |||||| ||| ||||||| ||| |||| ||  || ||||||||| ||||||||||||||||||| ||||| |    
T  24487176 cgtaagataaaatagatctgcttaatcaaatggtcctcctttaaaaaaaagatcatacaatttaaattaaaa-aattaataggatctatggttgaccaat 24487274  T
Q  413 cttaaa 418  Q
    ||||||    
T  24487275 cttaaa 24487280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 434
Target Start/End: Complemental strand, 42685097 - 42685014
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||| | | ||||||||||| ||||||||| | |||||| | | |||||||||||||||||||  ||||| |||||||||    
T  42685097 ttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccataga 42685014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 406
Target Start/End: Original strand, 54110143 - 54110233
Alignment:
Q  315 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtgg 406  Q
    ||||||||||||||| |    |||||||||||  || ||| ||| |||||||||||| || ||||||||| |||||||||||||||||||||    
T  54110143 taagataaaatagacctacaaaatccaatggtcatcgttttaaaaaaaaatcaaacgatttaaattaaaa-aattaataggatctatggtgg 54110233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 11224776 - 11224817
Alignment:
Q  390 aataggatctatggtggaccactcttaaagttggtccaccat 431  Q
    |||| ||||||||||||||||||||||| |||||||||||||    
T  11224776 aatatgatctatggtggaccactcttaaggttggtccaccat 11224817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 50810719 - 50810808
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || ||||||||||||| ||| |||||||    
T  50810719 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggtcctcctttaaaa 50810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 50865145 - 50865056
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || ||||||||||||| ||| |||||||    
T  50865145 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggtcctcctttaaaa 50865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 11219664 - 11219588
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    |||| ||| ||| ||||||||||  |||||||||| |||| ||||||||| | |||||| ||||||||||| |||||    
T  11219664 taattcaacggtcctcttttaaagaaaaaatcaaatggttaaaattaaaaaatttaatacgatctatggtgaaccac 11219588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 12107887 - 12107954
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||||||||| | ||||||| ||  |||||| |||||||||||||||| |||| ||||||||||||||    
T  12107887 atcaaacggtttatattaaaaaaaa-aatagggtctatggtggaccacttttaaggttggtccaccata 12107954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 43174593 - 43174679
Alignment:
Q  271 aagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||| |||||||| |  |||||||||||| |||||| || ||||||||||||| || | ||||||||||| |||||||||||    
T  43174593 aagatgaagaagaggaaaaaaaagttaggtgttggtagtacat-gttagataaaatagacatgag-aatccaatggtcctcttttaaaa 43174679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 7270546 - 7270467
Alignment:
Q  350 cttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    ||||||||| |||| ||||||| ||| || | |||| | |||||| |||||||||| |||||||||||| ||||||||||    
T  7270546 cttttaaaacaaaagatcaaacagttaaagtcaaaaaagttaataagatctatggtagaccactcttaaggttggtccac 7270467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 28909498 - 28909561
Alignment:
Q  348 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||| | |||| ||||| | ||| ||||||||| |||||||||||||||||||||||||    
T  28909498 ctcttttaataaaaaagatcaaccagtttaaattaaaaaaattaataggatctatggtggacca 28909561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 432
Target Start/End: Original strand, 21074137 - 21074256
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||||| || || || |||||||  ||||| | ||| ||| |||||| |||| ||||| ||| |||||||| | |||||||||||| | |    
T  21074137 gtaagataaaatagacatgcgtgattcaatggtcatctttcttaaaaaaatatcaaagggttaaaattgaaaaaattaataaggtctatggtggacta-t 21074235  T
Q  413 ct-taaagttggtccaccata 432  Q
    || ||| ||||||||||||||    
T  21074236 ctataatgttggtccaccata 21074256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 28909586 - 28909546
Alignment:
Q  396 atctatggtggaccactcttaaagttggtccaccatagatc 436  Q
    |||| ||||| ||||||||||| ||||||||||||||||||    
T  28909586 atctgtggtgaaccactcttaaggttggtccaccatagatc 28909546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 386
Target Start/End: Original strand, 40245745 - 40245852
Alignment:
Q  281 aaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaa 378  Q
    ||||| |||| | |||||||||| | ||| || |||||||||||||||| ||| ||||| |||  |||||||||    || ||||||||||||||| |||    
T  40245745 aaaggtaaaataattaggtgttgatagtatatagtaagataaaatagacctgtctaatcgaatcattctcttttttttaaaaaaaatcaaacggtttaaa 40245844  T
Q  379 ttaaaata 386  Q
    ||| ||||    
T  40245845 ttataata 40245852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 8e-59; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 270 - 432
Target Start/End: Complemental strand, 32255290 - 32255131
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 369  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| || ||||||||||    
T  32255290 gaagatgaagaaaaggaaaaaa--ttaggtgttggtggtacatcgtaagattaaatagacctgtctaatccaatggttatcttttacaa-aaaaatcaaa 32255194  T
Q  370 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32255193 cggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccata 32255131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 237 - 434
Target Start/End: Original strand, 13564020 - 13564216
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgta 336  Q
    ||||||||||||||||||||||||  ||| |  ||||||||||||| ||||||  ||| |||||||||| ||||||| |||| |||||||||| ||| ||    
T  13564020 tgtgagttgaagatgatgaagattattaaaggggaagatgaagaaagggaaaataatt-aggtgttggtagtacatcataagctaaaatagacatgtcta 13564118  T
Q  337 atccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||||||||||| ||| || |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | || |||||||||||    
T  13564119 atccaatggttctctttttaaaaaataatctaacggttcaaattaaaataattaataggatctatggtggaccactcttaaggatgatccaccataga 13564216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 268 - 429
Target Start/End: Complemental strand, 22537862 - 22537703
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    |||||||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||| ||  |||||||||||||| ||||||||  ||||||||    
T  22537862 tagaagatgaagaaaatgaaaaaaaattaggtgttggtggttcatcgtaagataaaatagacctgcataatccaatggttcccttttaaa--aaaaatca 22537765  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||| |||||| ||||    
T  22537764 aacggtttaaattaaaataattaataggatctatggtggatcactattaaggttggttcacc 22537703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 268 - 434
Target Start/End: Original strand, 11502235 - 11502398
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    |||||||||||||||||||||||   | |||||||||| |||||| ||||||||||||| || ||  |||||||||||||||||||| |||  |||||||    
T  11502235 tagaagatgaagaaaaggaaaaaa--tcaggtgttggtcgtacat-gtaagataaaataaacctgcctaatccaatggttctctttttaaaagaaaatca 11502331  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||    
T  11502332 aacggctgaaattaaaataattactaggatctatggtggaccactcttaaggttggtctaccataga 11502398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 44372994 - 44372867
Alignment:
Q  308 tacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtgg 406  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  44372994 tacatcctaagataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtgg 44372895  T
Q  407 accactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||| |||||| |||||    
T  44372894 accactcttaatgttagtccactataga 44372867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 434
Target Start/End: Complemental strand, 44381850 - 44381723
Alignment:
Q  308 tacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtgg 406  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  44381850 tacatcctaagataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtgg 44381751  T
Q  407 accactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||| |||||| |||||    
T  44381750 accactcttaatgttagtccactataga 44381723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 277 - 433
Target Start/End: Complemental strand, 22336274 - 22336119
Alignment:
Q  277 aagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttga 376  Q
    ||||||||||||   | |||||||||| ||||  |  |||||||||||||||||||   |||| ||||||| |||||| ||| ||| ||||| |||||||    
T  22336274 aagaaaaggaaattaaattaggtgttgttggtttacagtaagataaaatagacttgcacaatctaatggttatctttttaaaaaaatatcaa-cggttga 22336176  T
Q  377 aattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatag 433  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  22336175 aattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatag 22336119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 270 - 434
Target Start/End: Original strand, 43460636 - 43460800
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 369  Q
    ||||||||||||||||||||| | ||| |||||| |||| ||  ||||||||||||| || |  || ||  || ||| |||  || ||  ||| ||||||    
T  43460636 gaagatgaagaaaaggaaaaaaagttaagtgttgatggttcaatgtaagataaaatatacctacgtgatttaacggtcctccatttaataaaagatcaaa 43460735  T
Q  370 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43460736 gggtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 43460800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 268 - 410
Target Start/End: Complemental strand, 46835980 - 46835838
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt-aaaagaaaaatc 366  Q
    ||||||||||| |||||| |||| ||| || |||||||||||||||||| |||||||||||||||| |||| ||||  ||||||||| |||| ||||||     
T  46835980 tagaagatgaataaaagggaaaaaattaag-tgttggtggtacatcgtatgataaaatagacttgtctaatacaataattctcttttaaaaataaaaatt 46835882  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    || | ||| |||||||||||||||||||||| |||||| |||||    
T  46835881 aatcagtttaaattaaaataattaataggatatatggtagacca 46835838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 434
Target Start/End: Complemental strand, 43441605 - 43441484
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| ||||| |||||||||| ||  || ||||||| ||| ||||||| ||| | |||||||||||||||||||  ||||||||||||||    
T  43441605 cgtaagataaaatacacttgcgtaatccaatagtcatcctttaaaaaaaatatcaaacagtttacattaaaataattaataggacttatggtggaccact 43441506  T
Q  413 cttaaagttggtccaccataga 434  Q
    ||||| |||||| |||||||||    
T  43441505 cttaaggttggtacaccataga 43441484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 351 - 435
Target Start/End: Complemental strand, 35295920 - 35295836
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagat 435  Q
    |||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  35295920 ttttaaaatatagatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccacagat 35295836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 314 - 434
Target Start/End: Complemental strand, 16756128 - 16756009
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactc 413  Q
    ||||||||||||| ||||| |||||| |||||| ||| ||| ||| |||||||||| |||| ||||||||||||||||||||||||||||| ||| |||     
T  16756128 gtaagataaaatacacttgcgtaatctaatggtcctccttttaaa-aaaaatcaaatggttaaaattaaaataattaataggatctatggtagacaactt 16756030  T
Q  414 ttaaagttggtccaccataga 434  Q
    |||| |||| | |||||||||    
T  16756029 ttaaggttgtttcaccataga 16756009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 434
Target Start/End: Complemental strand, 39981529 - 39981455
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||||    
T  39981529 aaaaatcaaacggtttaaattagaataattaattggatctatggtggaccatttttaaagttggtccaccataga 39981455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 434
Target Start/End: Complemental strand, 41328478 - 41328357
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| |  || ||||||||| |   ||| ||| ||| ||| ||||||||||| |||||| |||||||||||||||||||||||||||| |    
T  41328478 cgtaagataaaatacatatgcgtaatccaacgaccctccttttaaaaaaatatcaaacggtttaaattagaataattaataggatctatggtggaccatt 41328379  T
Q  413 cttaaagttggtccaccataga 434  Q
     ||||||||| |||||||||||    
T  41328378 tttaaagttgttccaccataga 41328357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 434
Target Start/End: Original strand, 30334503 - 30334619
Alignment:
Q  316 aagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactctt 415  Q
    |||||||||||||| || |||||||||  || ||| || |||| ||||||| ||||||| ||||||||| |||||||||||||||||||||||   ||||    
T  30334503 aagataaaatagacatgggtaatccaagcgtcctccttaaaaa-aaaaatctaacggtttaaattaaaa-aattaataggatctatggtggactgttctt 30334600  T
Q  416 aaagttggtccaccataga 434  Q
    ||||||||||| |||||||    
T  30334601 aaagttggtcctccataga 30334619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 364 - 434
Target Start/End: Complemental strand, 40811529 - 40811459
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| |||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  40811529 atcaaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccataga 40811459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 432
Target Start/End: Original strand, 47060288 - 47060452
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    ||||||| |||||| ||| ||| | |||||||||| ||  ||| | |||||||||||| ||||||||||| |||||||  || |||||||| | ||||||    
T  47060288 agaagataaagaaagggagaaataattaggtgttgttgacacaccataagataaaatacacttgtgtaattcaatggtcatccttttaaaaaacaaatca 47060387  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||| || || || ||| | |||||| | |||||||||||| | |||||| ||||||||||||||    
T  47060388 aacgattaaattttaaaaatttaataaggtctatggtggactattcttaaggttggtccaccata 47060452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 669297 - 669366
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  669297 atcaaacggtttaaattaacaaaattaataggatctatggtggaccactctt-aagatggtccaccataga 669366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 365 - 434
Target Start/End: Complemental strand, 46201338 - 46201269
Alignment:
Q  365 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| ||| | |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  46201338 tcaaacagtttatattaaaataattaatatgatctatggtggaccactcttaaggttggttcaccataga 46201269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 2414957 - 2414890
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtcca 427  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||||||| |||| |||||||||    
T  2414957 aaaattcaaacggtttaaattaagaaaattaataggatctatggtggaccacttttaaggttggtcca 2414890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 410
Target Start/End: Complemental strand, 48312300 - 48312202
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||| || |||||||||||||  | ||||||||| |||| |||||||  || ||||||||| |||||||||||||||||||||||||    
T  48312300 cgtaagataaaatagacctgcgtaatccaatggtcatccttttaaaaaaaaagatcaaaccatttaaattaaaa-aattaataggatctatggtggacca 48312202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 434
Target Start/End: Complemental strand, 47454559 - 47454474
Alignment:
Q  349 tcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||| |||| ||||||||||||||| ||||||| | |||||||| | |||| | |||||||||||||| ||||||| ||||||||    
T  47454559 tctttaaaaaaaaaaatcaaacggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccataga 47454474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 421
Target Start/End: Complemental strand, 25533523 - 25533339
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaaga---aaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgt 333  Q
    ||||||||||||||||||||||||  ||||||||||||||||||   ||||| |||| | |||   |||| |||||||  ||||| || ||||||| ||     
T  25533523 tgtgagttgaagatgatgaagattagtaaggtagaagatgaagaaagaaagggaaaaaaatta---gttgttggtacacggtaagttataatagacatgc 25533427  T
Q  334 gtaatccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagtt 421  Q
     ||||| ||||||  || |||||||| | | ||||||||||| ||||| ||| | |||||| | ||||| ||||||||| |||||||||    
T  25533426 ataatcaaatggtcatctttttaaaaaatatatcaaacggtttaaatt-aaagatttaataaggtctatagtggaccacccttaaagtt 25533339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 4167672 - 4167609
Alignment:
Q  348 ctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    ||||||||||  |||||||||| |||||||||| ||| | |||||| |||||||||||||||||    
T  4167672 ctcttttaaagaaaaaatcaaaaggttgaaatttaaaaatttaataagatctatggtggaccac 4167609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 434
Target Start/End: Complemental strand, 15992328 - 15992273
Alignment:
Q  379 ttaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||||| ||||  | ||||||||| ||||||||||||||||    
T  15992328 ttaaaataattaataggatctttggtaaatcactcttaaggttggtccaccataga 15992273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 434
Target Start/End: Complemental strand, 47059371 - 47059247
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaa--aaatcaaacggttgaaatt--aaaataattaataggatctatggtggacc 409  Q
    ||||||||||||| || || |||||||||||||  || ||| ||| ||  | ||||||||||| |||||  |||| |||||||| | |||||||||| |     
T  47059371 gtaagataaaatacacatgcgtaatccaatggtcatccttttaaataaacagatcaaacggtttaaattaaaaaaaaattaataaggtctatggtgggct 47059272  T
Q  410 actcttaaagttggtccaccataga 434  Q
    |||||||| |||| |||||||||||    
T  47059271 actcttaaggttgctccaccataga 47059247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 434
Target Start/End: Original strand, 47456276 - 47456361
Alignment:
Q  349 tcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||| |||| |||||||||||  || | ||||| | |||||||| | |||||| ||||||||| ||||||||| |||||||||||    
T  47456276 tctttaaaaaaaaaaatcaaacaattaagattaatacaattaataaggtctatgatggaccacttttaaagttgttccaccataga 47456361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 411
Target Start/End: Complemental strand, 26406425 - 26406283
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||| ||| | |||||||||| | || ||  ||| |||| || |||| | | | |||||| |||||||||||  || ||| |||||    
T  26406425 agaagatgaagaaatggagaaaaaattaggtgttgattgttcactgtatgatacaacagacatatatgatccaacggttctcttttttaaaaaatatcaa 26406326  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    | |||| ||||||||  |||| |||  ||||||||||||||||    
T  26406325 agggttaaaattaaatgaatttataatatctatggtggaccac 26406283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 434
Target Start/End: Complemental strand, 40508586 - 40508516
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||||| ||| |||||||   ||||||||||||| ||||||||  ||| |||||||||||    
T  40508586 atcaaacggttaaaatttaaaaaattaatgaaatctatggtggacaactcttaagattgatccaccataga 40508516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Original strand, 22115105 - 22115142
Alignment:
Q  397 tctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  22115105 tctatggtggaccactcttaaggttggtccactataga 22115142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Original strand, 40509675 - 40509712
Alignment:
Q  397 tctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  40509675 tctatggtggaccactcttaaggttggtccactataga 40509712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 411
Target Start/End: Original strand, 10957070 - 10957110
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    |||| ||||||||| |||||||| |||||||||||||||||    
T  10957070 ggttaaaattaaaagaattaataagatctatggtggaccac 10957110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 8e-59; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 268 - 434
Target Start/End: Original strand, 30858982 - 30859148
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaaga-aaaatc 366  Q
    ||||||||||||||||||||||| ||| |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| ||| | ||||||    
T  30858982 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtatattgtaagataaaatagacttgtctaatccaatggttctctttttaaaaagaaaatc 30859080  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  30859081 aaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccataga 30859148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 268 - 430
Target Start/End: Complemental strand, 30911048 - 30910885
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttag-gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatc 366  Q
    ||||||||||||||||||||||| |   |  |||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||  |||| ||    
T  30911048 tagaagatgaagaaaaggaaaaaaagaaaatgtgttggtggtacatcgtaagataaaatagacatgcctaattcaatggttctcttttaaagaaaaactc 30910949  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 430  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30910948 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacca 30910885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 268 - 434
Target Start/End: Complemental strand, 22048038 - 22047872
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt--aaaagaaaaat 365  Q
    |||||||||||||||||||||||   |||||||||| |||||||| |||||||||||||||| | | |||| |||||||||||||||  |||| ||||||    
T  22048038 tagaagatgaagaaaaggaaaaaa--ttaggtgttgatggtacattgtaagataaaatagacctttctaattcaatggttctcttttcaaaaaaaaaaat 22047941  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||    
T  22047940 caaacggtttaaattaaaataattcataggatttatggtggaccactcttaaggttgatccaccataga 22047872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 270 - 432
Target Start/End: Original strand, 36898791 - 36898957
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttta----aaagaaaaat 365  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| || |||||||||||||  |||||||    ||| ||||||    
T  36898791 gaagatgaagaaaagaaaaaaaaattaggtgttggtggtacatcgtaagataaaatagacatgcgtaatccaatggtcatcttttagaagaaaaaaaaat 36898890  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||| |||| ||| |||||||||||| || ||||||||||||| ||| |||| ||||| ||||||||    
T  36898891 caaagggtttaaactaaaataattaacagaatctatggtggactacttttaaggttgggccaccata 36898957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 433
Target Start/End: Complemental strand, 11262705 - 11262532
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt---------aaaa 358  Q
    ||||||||||||||||||||||| ||| ||||||||||||||  | |||||||||||||||| ||| |||||||||  |||| ||||         ||||    
T  11262705 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtatgtagtaagataaaatagacctgtctaatccaatcattctttttttttttttttaaaa 11262607  T
Q  359 gaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatag 433  Q
     ||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11262606 aaaagatcaaatggtttaaattataataattaataggatctatggtggaccactcttaaggttggtccaccatag 11262532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 269 - 434
Target Start/End: Original strand, 9220270 - 9220438
Alignment:
Q  269 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||| ||| ||| | ||||||||||||  ||||||||| | |||||||||| |||||||||||| |||  ||||||||  |||||||||    
T  9220270 agaagatgaagaaaatgaataaaaagttaggtgttggtaatacatcgtatggtaaaatagacatgtgtaatccaacggtcgtcttttaag-gaaaaatca 9220368  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccac---tcttaaagttggtccaccataga 434  Q
    ||||||| |||||||||||||||||| ||| ||||| |||||||   |||||| ||||||||||||||||    
T  9220369 aacggtttaaattaaaataattaataagatttatgggggaccactcttcttaatgttggtccaccataga 9220438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 313 - 434
Target Start/End: Complemental strand, 1102877 - 1102756
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| |||||  ||||||| ||||  || ||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  1102877 cgtaagataaaatacacttgcataatccactggtcatcatttaaaaaaaagatcaaacggtttaaattaaaataattaataagatctatggtggaccact 1102778  T
Q  413 cttaaagttggtccaccataga 434  Q
    ||||| ||||||| ||||||||    
T  1102777 cttaaggttggtctaccataga 1102756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 298 - 417
Target Start/End: Original strand, 4127089 - 4127214
Alignment:
Q  298 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt------aaaagaaaaatcaaacggttgaaattaaaataattaa 391  Q
    |||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||      |||| |||||||||| |||| |||||||| |||||||    
T  4127089 gtgttggtggtacatcataagataaaatagacctgtgcaatctaatggttctcttttacaaaaaaaataaaaatcaaatggtttaaattaaattaattaa 4127188  T
Q  392 taggatctatggtggaccactcttaa 417  Q
     |||||||||||||||||||| ||||    
T  4127189 caggatctatggtggaccacttttaa 4127214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 298 - 421
Target Start/End: Original strand, 13520640 - 13520764
Alignment:
Q  298 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaaaatcaaacggttgaaattaaaataattaatagga 396  Q
    ||||||||| |||||| ||||||||||||||| |  ||||||||| ||||||||||| | || ||||||| ||| ||| |||| ||| ||||||||||||    
T  13520640 gtgttggtgatacatcataagataaaatagaccttcgtaatccaacggttctctttttataaaaaaaatccaacagtttaaatcaaattaattaatagga 13520739  T
Q  397 tctatggtggaccactcttaaagtt 421  Q
    ||||||||| |||||||||||||||    
T  13520740 tctatggtgaaccactcttaaagtt 13520764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 267 - 434
Target Start/End: Complemental strand, 39604158 - 39603993
Alignment:
Q  267 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttta---aaagaaaa 363  Q
    |||||||||||||||||| |||||   | |||||||||||||||||| || ||||| |||||||||   | |  |||| || ||||||    ||| ||||    
T  39604158 gtagaagatgaagaaaagaaaaaa---tcaggtgttggtggtacatcatatgataagatagacttgctgatt--aatgattatcttttttttaaaaaaaa 39604064  T
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||    
T  39604063 atcaaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccataga 39603993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 10736018 - 10735900
Alignment:
Q  317 agataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactctta 416  Q
    |||||||||| || || |||||| |||||| || |||||||| |  ||||| |||||| |||||||||||||||||| ||||||||||||||  || |||    
T  10736018 agataaaatacacctgcgtaatcaaatggtccttttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 10735919  T
Q  417 aagttggtccaccatagat 435  Q
    | |||||||||||||||||    
T  10735918 acgttggtccaccatagat 10735900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 27705223 - 27705293
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  27705223 atcaaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccataga 27705293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 1010274 - 1010341
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  1010274 atcaaagggttgaaattaaa-taattaataggatctatggcggaccactcttaaggttggtccaccata 1010341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 8521461 - 8521394
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8521461 atcaaagggttgaaattaaa-taattaataggatctatggtggaccattcttaaggttggtccaccata 8521394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 1009399 - 1009325
Alignment:
Q  357 aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| |||||| | |||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1009399 aagaaagatcaaaggattgagattaaa-taattaataggatctatggtggaccactcttaaggttggtccaccata 1009325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 430
Target Start/End: Complemental strand, 15548478 - 15548381
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaat----aggatctatggtggaccactcttaaagttggtccacca 430  Q
    ||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||    ||||| ||||||||| || |||||| ||||||||||||    
T  15548478 taatccaatggttctcttttaaaa--aaaatcaaatggtttaaattaaaataattaattaataggatttatggtggatcattcttaaggttggtccacca 15548381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 434
Target Start/End: Original strand, 22308636 - 22308777
Alignment:
Q  294 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaat 392  Q
    |||||||||| ||||||| ||||||  | ||||||| ||  ||||||||||||  |||||| ||| || | |||||| |||| | ||||||| | |||||    
T  22308636 ttaggtgttgttggtacaccgtaagtaacaatagacatgcataatccaatggtcatctttttaaaaaacagatcaaatggtttacattaaaaaatttaat 22308735  T
Q  393 aggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |   ||||||||||||||||||||| || |||||||||||||    
T  22308736 aatgtctatggtggaccactcttaaggtaggtccaccataga 22308777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 434
Target Start/End: Complemental strand, 324251 - 324177
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||| | |||||   |||||||| | |||||| ||||||||| |||||||||||||||||||||    
T  324251 aaaaatcaaacggttaagattaacgcaattaataaggtctatgatggaccactattaaagttggtccaccataga 324177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 434
Target Start/End: Original strand, 325041 - 325164
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttt--taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||| ||||||||||| | ||||||  || | ||||  | ||| ||| ||||||||||| ||||||| | |||||||| | |||| | |||||||    
T  325041 cgtaagatataatagacttgtatgatccaacagtccactttctttaaaaaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggacca 325140  T
Q  411 ctcttaaagttggtccaccataga 434  Q
    || |||| ||||||||||||||||    
T  325141 ctattaaggttggtccaccataga 325164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 11797395 - 11797461
Alignment:
Q  319 ataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatcaaacggttgaaattaaaa 384  Q
    |||||||| || |||||||||||||||| ||||||||||| ||| |||| ||||||| |||||||||    
T  11797395 ataaaataaacatgtgtaatccaatggtcctcttttaaaaaaaataatctaacggttaaaattaaaa 11797461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 411
Target Start/End: Complemental strand, 223484 - 223384
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||| || ||||||||| ||||||  |||||  || ||| ||||||||||| ||||||||| | ||||||   |||||||| |||||    
T  223484 cgtaagataaaatagacatgagtaatccaaaggttctactttaaataaaaaagatcaaacggtttaaattaaaaaatttaataaagtctatggtagacca 223385  T
Q  411 c 411  Q
    |    
T  223384 c 223384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 7426862 - 7426799
Alignment:
Q  348 ctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    ||||||||||  |||||||||| |||||||||| ||| | |||||| | |||||||||||||||    
T  7426862 ctcttttaaagaaaaaatcaaaaggttgaaatttaaaaatttaataaggtctatggtggaccac 7426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 33173867 - 33173938
Alignment:
Q  364 atcaaacggttgaaatt-aaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||||| |||| |||||||    |||||||| |||||||||||| ||||||||||||||||    
T  33173867 atcaaacggttaaaatttaaaaaaattaatgaagtctatggtagaccactcttaaggttggtccaccataga 33173938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 401
Target Start/End: Original strand, 17420474 - 17420531
Alignment:
Q  343 tggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctat 401  Q
    ||||||||||| |||| |||||||||||  || ||||||||||||||||||||| ||||    
T  17420474 tggttctctttaaaaa-aaaaatcaaacaatttaaattaaaataattaataggacctat 17420531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 22048942 - 22049043
Alignment:
Q  264 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaa 362  Q
    |||| |||||||||||| | ||||||  | |||| || || |||| ||  |||||||||||||||| || ||||||||||| || |||||||| ||||||    
T  22048942 aaggaagaagatgaagagagggaaaataaattagctgatgttggttcactgtaagataaaatagacatgcgtaatccaatgattgtcttttaagaagaaa 22049041  T
Q  363 aa 364  Q
    ||    
T  22049042 aa 22049043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 411
Target Start/End: Complemental strand, 28702769 - 28702729
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    |||| ||||||||| |||||||| |||||||||||||||||    
T  28702769 ggttaaaattaaaagaattaataagatctatggtggaccac 28702729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 268 - 434
Target Start/End: Original strand, 18616817 - 18616982
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||  || ||||||||    
T  18616817 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctcttttttaaaaaaaatca 18616915  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||    
T  18616916 aacggttgaaattaaaataattaataggatctatggtggaccacttttaagactggtccaccataga 18616982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 434
Target Start/End: Complemental strand, 29219689 - 29219525
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||      |||||||    
T  29219689 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctctttt-tttttaaaatca 29219592  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  29219591 aacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccataga 29219525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 268 - 434
Target Start/End: Complemental strand, 29332988 - 29332824
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||      |||||||    
T  29332988 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctctttt-tttttaaaatca 29332891  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  29332890 aacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccataga 29332824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 268 - 432
Target Start/End: Original strand, 1085198 - 1085363
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaag--aaaaat 365  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| || ||  ||||||||| ||||||||||       ||||||    
T  1085198 tagaagatgaagaaaagaaaaaaaatt-aggtgttggtggtacatcgtaagataaaataaacctgcttaatccaattgttctcttttttttttaaaaaat 1085296  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  1085297 caaacggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatgatccaccata 1085363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 269 - 435
Target Start/End: Complemental strand, 8321064 - 8320894
Alignment:
Q  269 agaagatgaagaaaagga---aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aa 364  Q
    ||||||||||||||| ||   |||| | |||||||||| |||| || | | |||||||||||||||| || ||| |||| | ||||||||||| ||| ||    
T  8321064 agaagatgaagaaaaagataaaaaaaaattaggtgttgatggtgcaccattagataaaatagacttgcgtgatcaaatgttcctcttttaaaaaaaacaa 8320965  T
Q  365 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagat 435  Q
    |||||||||| ||||||||||||||||||  |||||||||||||| ||||||| | |||||||||||||||    
T  8320964 tcaaacggtttaaattaaaataattaatataatctatggtggaccgctcttaaggatggtccaccatagat 8320894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 434
Target Start/End: Original strand, 42641672 - 42641838
Alignment:
Q  270 gaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atca 367  Q
    |||||||||||||| |||||| |  ||| ||||||  ||| || |||||||||||||| || |  || |||||| | ||||||||||||| |||| ||||    
T  42641672 gaagatgaagaaaaagaaaaaaaagttaagtgttgaaggttcaacgtaagataaaatacacctacgtgatccaacgattctcttttaaaaaaaaagatca 42641771  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  42641772 aacagtttaaattaaaataattaataggatctatggtagaccactcttaaggttggcccaccataga 42641838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 241 - 432
Target Start/End: Original strand, 34513336 - 34513529
Alignment:
Q  241 agttgaagatgatgaagatttataaggtagaagatgaagaaa--aggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaat 338  Q
    ||||||||||||||||||||  ||||||||||||||||||||  | |||||| ||| || ||||| ||||||| |||||| || |||||||  |  ||||    
T  34513336 agttgaagatgatgaagattagtaaggtagaagatgaagaaagaaagaaaaaaatt-agttgttgttggtacaccgtaagttacaatagacacgcataat 34513434  T
Q  339 ccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| |  |||||| ||| || | ||||||||||| ||||||||| |||||||| | ||||||||||| ||||||||| ||||||| ||||||    
T  34513435 ccaatgatcatctttttaaaaaacagatcaaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttggtcaaccata 34513529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 270 - 432
Target Start/End: Complemental strand, 32469452 - 32469290
Alignment:
Q  270 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 369  Q
    |||||||||||||| |||||| | ||| |||||| |||| ||  |||||||| |||| || | ||| ||| || ||| |||  || ||  ||| ||||||    
T  32469452 gaagatgaagaaaaagaaaaaaagttaagtgttgatggttcaatgtaagatacaatacacctatgtgatctaacggtcctccatttaataaaatatcaaa 32469353  T
Q  370 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
     |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32469352 gggtttaaattaaaataattaataggatctatagtggaccactcttaaagttggtccaccata 32469290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 434
Target Start/End: Original strand, 4920916 - 4921036
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || || ||||||||||| | ||| ||| ||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||| |    
T  4920916 cgtaagataaaatacacctgcgtaatccaatgatcctccttttaaa-aaaaatcaaacggtttaaattagaataattaataggatttatggtggaccatt 4921014  T
Q  413 cttaaagttggtccaccataga 434  Q
     |||||||||||| ||||||||    
T  4921015 tttaaagttggtctaccataga 4921036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 391
Target Start/End: Complemental strand, 35903844 - 35903719
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctt---ttaaaagaaaaat 365  Q
    |||||||||||||||||||||| | |||||| ||| ||||||||| ||||||||||||||| ||| ||||| ||||||||| ||     |||| ||||||    
T  35903844 agaagatgaagaaaaggaaaaaaagttaggtattgctggtacatcataagataaaatagacatgtataatctaatggttcttttaaaaaaaaaaaaaaat 35903745  T
Q  366 caaacggttgaaattaaaataattaa 391  Q
    ||||||||| ||||||||||| ||||    
T  35903744 caaacggtttaaattaaaatatttaa 35903719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 269 - 434
Target Start/End: Original strand, 28611066 - 28611230
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || | |||||||||||| || || ||||| |||||   ||| ||| ||| |||||||||    
T  28611066 agaagatgaagaaagggagaaataattaagtgttgttgactcaccataagataaaatacacctgcgtaattcaatgaccctccttttaaaaaaaaatcaa 28611165  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| |||||||| ||||||||||||||||| |||||||| | ||||||| |||||||||||||    
T  28611166 acggtttaaattaaa-taattaataggatctatagtggaccatttttaaagtcggtccaccataga 28611230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 434
Target Start/End: Complemental strand, 43033319 - 43033219
Alignment:
Q  335 taatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatag 433  Q
    |||||||||||| |||||||| ||||||  |||| | |||| |||||||||||||||||||| | ||||||||||||||||||| ||||||| |||||||    
T  43033319 taatccaatggtcctcttttagaagaaatgatcacaaggtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatag 43033220  T
Q  434 a 434  Q
    |    
T  43033219 a 43033219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 434
Target Start/End: Original strand, 43034336 - 43034448
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||||||| ||  ||||||||||||  |||||||||| |  |||||||||||| |||||         |||||||||||||||||||||||    
T  43034336 cgtaagataaaatagacatgcataatccaatggtcatcttttaaaaaattaatcaaacggtttaaatt---------aataggatctatggtggaccact 43034426  T
Q  413 cttaaagttggtccaccataga 434  Q
    |||||||||| |||||||||||    
T  43034427 cttaaagttgatccaccataga 43034448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 434
Target Start/End: Original strand, 11317277 - 11317345
Alignment:
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  11317277 caaacgatttaaattaaaataattaataggatctatggtagaccactcttaaggttggtctaccataga 11317345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 364 - 420
Target Start/End: Complemental strand, 35903715 - 35903659
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagt 420  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  35903715 atcaaacggtttaaattaaaatatttaataggatctatggtggaccactctaaaagt 35903659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 6030377 - 6030447
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| |||||||||  |||||||||||||||||| || ||||||||| ||||||||||| ||||    
T  6030377 atcaaacggtttaaattaaaaatattaataggatctatggtagatcactcttaaggttggtccaccgtaga 6030447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 434
Target Start/End: Complemental strand, 17459565 - 17459393
Alignment:
Q  267 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt---------aaa 357  Q
    |||||||||||||||| | |||||   |||||||||||||||| ||| || ||||||||||    || ||||||||||||||||||||         |||    
T  17459565 gtagaagatgaagaaaggaaaaaa---ttaggtgttggtggtatatcata-gataaaataggtcagtctaatccaatggttctctttttttaaaaaaaaa 17459470  T
Q  358 agaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
      ||||||||||||||| |||||| |||||||||||||||||||| | || |||| ||||  || ||||||||||||    
T  17459469 taaaaaatcaaacggtttaaattataataattaataggatctatgttagatcacttttaagattcgtccaccataga 17459393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 434
Target Start/End: Complemental strand, 34467848 - 34467644
Alignment:
Q  239 tgagttgaagatgatgaagatttataaggtagaagatgaagaaa------aggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttg 332  Q
    |||||| |||||||||||||||  |||||||||| |  ||||||      | |||||| |||||| ||||| |||||||||||||| || |||||||       
T  34467848 tgagttaaagatgatgaagattagtaaggtagaatactaagaaagaaagaaagaaaaaaatttagttgttgttggtacatcgtaagttacaatagacaca 34467749  T
Q  333 tgtaatccaatggttctc-ttttaaaagaaaaat--caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    | ||||||| ||||  || |||||||| ||||||  ||||| ||| ||||||||| | |||||| | | ||||||||||||||||||| ||| ||||| |    
T  34467748 tataatccagtggtcatcattttaaaaaaaaaatatcaaacagtttaaattaaaaaacttaataaggtttatggtggaccactcttaaggtttgtccatc 34467649  T
Q  430 ataga 434  Q
    |||||    
T  34467648 ataga 34467644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 273 - 354
Target Start/End: Complemental strand, 7436766 - 7436685
Alignment:
Q  273 gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt 354  Q
    ||||| ||||| ||| || | ||||||| | |||||||||| ||||||||||||||  |||||||||||| ||| |||||||    
T  7436766 gatgaggaaaatgaagaaaagttaggtggtagtggtacatcctaagataaaatagatatgtgtaatccaacggtcctctttt 7436685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 389 - 430
Target Start/End: Original strand, 16295150 - 16295191
Alignment:
Q  389 taataggatctatggtggaccactcttaaagttggtccacca 430  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  16295150 taataggatctatggtggaccactgttaaggttggtccacca 16295191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 407
Target Start/End: Original strand, 7753334 - 7753477
Alignment:
Q  264 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatgg-----ttctcttttaaaa 358  Q
    |||| |||||||||||||||||||| | | |||||||||| || | ||| |||||||||| |||| | |  |||| ||||||     ||||||||    |    
T  7753334 aaggaagaagatgaagaaaaggaaataaaattaggtgttgttgattcattgtaagataaactagattcgcataattcaatggtagcattctcttt----a 7753429  T
Q  359 gaaaaatcaaacggttgaaattaaaataattaataggatctatggtgga 407  Q
    |||||||||| ||||| ||||||||| |||||||| | |||||||||||    
T  7753430 gaaaaatcaagcggtttaaattaaaa-aattaatacggtctatggtgga 7753477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 7983590 - 7983653
Alignment:
Q  348 ctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    ||||||||||  |||||||||| || ||||||| ||| | |||||| |||||||||||||||||    
T  7983590 ctcttttaaagaaaaaatcaaaaggatgaaatttaaaaatttaataagatctatggtggaccac 7983653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 11547868 - 11547806
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtcca 427  Q
    ||||||||||| |||||| || | |||||| ||||||||||||||||||| ||| |||||||||    
T  11547868 atcaaacggtttaaattataa-atttaatacgatctatggtggaccactcctaaggttggtcca 11547806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 430
Target Start/End: Complemental strand, 30748704 - 30748621
Alignment:
Q  348 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 430  Q
    ||||||||| | |||| |||||||  || |||||||||||||||||| |||||||||||  |||||||||| ||| || |||||    
T  30748704 ctcttttaataaaaaagatcaaacaatttaaattaaaataattaatatgatctatggtgtgccactcttaaggtttgttcacca 30748621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 23232380 - 23232330
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||| ||||||||| |||||||| | | ||||||||||||    
T  23232380 aaaaatcaaacggttaaaattaaaagaattaataaggtttatggtggacca 23232330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 25570753 - 25570851
Alignment:
Q  337 atccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| || |||||||| ||| |||||||  || ||| ||||||| |||||| | |||||||||||||||   |||||||||| |||| ||||    
T  25570753 atccaatggttttcattttaaaaaaaagatcaaacctttaaaaataaaatatttaataaggtctatggtggaccacctataaagttggttcaccttaga 25570851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 434
Target Start/End: Complemental strand, 34464176 - 34464106
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||| ||| ||||||||| |  ||||| | ||||||||||||||||||||| ||||||| || |||||    
T  34464176 atcaaacagtttaaattaaaaaatctaataaggtctatggtggaccactcttaaggttggtcaacgataga 34464106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 404
Target Start/End: Original strand, 16290705 - 16290742
Alignment:
Q  367 aaacggttgaaattaaaataattaataggatctatggt 404  Q
    ||||| || |||||||||||||||||||||||||||||    
T  16290705 aaacgatttaaattaaaataattaataggatctatggt 16290742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 424
Target Start/End: Original strand, 30749161 - 30749293
Alignment:
Q  294 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaattaaaataattaa 391  Q
    |||| ||||| |||| || ||||||||| | ||||| ||  | ||| || ||| |||||||||  || ||| |||| |||||| ||||||||||||||||    
T  30749161 ttagatgttgttggttcaccgtaagatacagtagacatgcatgatctaacggtcctcttttaatcaaaaaagatcatacggtttaaattaaaataattaa 30749260  T
Q  392 taggatctatggtggaccactcttaaagttggt 424  Q
    ||||  || | ||| ||||||||||| ||||||    
T  30749261 taggccctgtagtgaaccactcttaaggttggt 30749293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 34513149 - 34513108
Alignment:
Q  241 agttgaagatgatgaagatttataaggtagaagatgaagaaa 282  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  34513149 agttgaagatgatgaaaattagtaaggtagaagatgaagaaa 34513108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 1e-57; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 269 - 434
Target Start/End: Complemental strand, 17837920 - 17837755
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||| ||  ||||||||||||| || |||  ||||||||||||    
T  17837920 agaagatgaagaaaaggacaaaaaattagatgttggtggtacatcgtaagataaaatagacctgcctaatccaatggttatcgtttttaagaaaaatcaa 17837821  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  17837820 acggttgaaattaaaataattaataggatctatggtggaccactcttaatgtttgtccaccataga 17837755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 269 - 430
Target Start/End: Original strand, 29381542 - 29381703
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||  || |||||||||    
T  29381542 agaagatgaagaaaaggacaaaaaattagatgttggtggtacatcgtaagataaaatagacctgcctaatccaatggttatctttttgaaaaaaaatcaa 29381641  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 430  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  29381642 acggttgaaattaaaataattaataggatctatggtggatcactcttaaggtttgtccacca 29381703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 429
Target Start/End: Original strand, 18346563 - 18346722
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    |||||||||||||||| |||| | ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||| ||||||||    
T  18346563 tagaagatgaagaaaatgaaacaaatt-aggtgttggtggtacatcgtaagataaaatagacttgcataatccaatggtttacttttaaaa-aaaaatca 18346660  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||| ||||    
T  18346661 aacggtttaaattaaaataattaataggatttatagtggaccactcttaaggttggttcacc 18346722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 268 - 434
Target Start/End: Original strand, 5187433 - 5187599
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||| ||||| | |||||||||| ||||||||  ||||||||||||||  ||  |||||||||| | ||||||||||| ||||||||    
T  5187433 tagaagatgaagaaaagaaaaaaaaattaggtgttgatggtacatgataagataaaatagagctgcttaatccaatgatgctcttttaaaataaaaatca 5187532  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||| ||||||||||| |||||||||||||||||||||| |||||| |||| |||||||||| |||||    
T  5187533 aacagttgaaattaatataattaataggatctatggtgaaccacttttaaggttggtccactataga 5187599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 269 - 429
Target Start/End: Complemental strand, 23392520 - 23392358
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaat--c 366  Q
    |||||||||||||||| |||   | ||| |||||| ||||  |  |||||||||||||||||||  ||||| ||||||| |||||||||| ||||||  |    
T  23392520 agaagatgaagaaaagaaaattaaattacgtgttgttggtttacagtaagataaaatagacttgcataatctaatggttatcttttaaaaaaaaaatatc 23392421  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||    
T  23392420 aaacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttgatccacc 23392358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 269 - 434
Target Start/End: Complemental strand, 11723090 - 11722924
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || ||||||| |||||| || ||||||||||||||   ||| |||||||| ||||||||    
T  11723090 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagagaaaatacacctgtgtaatccaatgaccctccttttaaaaaaaaaatca 11722991  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||| |||||| |||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  11722990 aacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccataga 11722924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 434
Target Start/End: Original strand, 7311565 - 7311702
Alignment:
Q  298 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaa-agaaaaatcaaacggttgaaattaaaataattaatagga 396  Q
    |||||| |||| || |||||||||||||| |  | ||| |||||| ||| ||  |||||| | ||||||||||||||| |||||||||||||||||||||    
T  7311565 gtgttgatggttcaacgtaagataaaatacatctatgtgatccaacggtcctgctttaaacaaaaaaatcaaacggtttaaattaaaataattaatagga 7311664  T
Q  397 tctatggtggaccactcttaaagttggtccaccataga 434  Q
    | ||||||||||||||||||| |||||| |||||||||    
T  7311665 tttatggtggaccactcttaaggttggttcaccataga 7311702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 434
Target Start/End: Complemental strand, 11967523 - 11967354
Alignment:
Q  269 agaagatgaagaaaaggaa--aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa--- 363  Q
    ||||||||||||||||| |  ||| | |||||||||| |||| || | | ||||||||| ||||||  ||||| ||||||  |||||| ||| ||||       
T  11967523 agaagatgaagaaaaggtacaaaaaaattaggtgttgatggtgcaccattagataaaat-gacttgcttaatcaaatggtcatctttttaaaaaaaatta 11967425  T
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||| ||| |||||||||||||||||| |||||||| |||||| |||| || |||||||||| |||||    
T  11967424 atcaaacagtttaaattaaaataattaatatgatctatgatggacccctctcaaggttggtccacaataga 11967354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 232405 - 232316
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || ||||||||||||||||| |||||||    
T  232405 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcctttaaaa 232316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 432
Target Start/End: Complemental strand, 12669906 - 12669863
Alignment:
Q  389 taataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||    
T  12669906 taatatgatctatggtggaccactcttaaggttggtccaccata 12669863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 1367642 - 1367567
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatg 344  Q
    |||||||||||||||||||| | | |||  |||||||||||||||| |||||| |||| || || || ||||||||    
T  1367642 agaagatgaagaaaaggaaacaaagttatatgttggtggtacatcgcaagatataatacacatgcgtgatccaatg 1367567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 358
Target Start/End: Original strand, 233454 - 233543
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 358  Q
    ||||||||||||||  |||||  | |||| ||||| || | ||  |||||||||||||||| |||||||||||||||  ||| |||||||    
T  233454 agaagatgaagaaagagaaaattaattagatgttgttgattcactgtaagataaaatagacatgtgtaatccaatggccctcctttaaaa 233543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 429
Target Start/End: Original strand, 7312923 - 7313016
Alignment:
Q  336 aatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 429  Q
    |||||||||||||||| ||  || ||||||||||| ||| ||||||||| ||||| ||    ||||||||||||||   ||| |||||||||||    
T  7312923 aatccaatggttctctatttgaacaaaaatcaaacagtttaaattaaaaaaattattaaagcctatggtggaccacatataatgttggtccacc 7313016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 32506969 - 32507005
Alignment:
Q  399 tatggtggaccactcttaaagttggtccaccatagat 435  Q
    |||||| |||||||||||| |||||||||||||||||    
T  32506969 tatggtagaccactcttaaggttggtccaccatagat 32507005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 268 - 434
Target Start/End: Original strand, 43386 - 43551
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||||||||| | |||||||| |||| || ||||| ||||||||||||||||  ||||| |||||||||||||| ||| ||||||||    
T  43386 tagaagatgaagaaaaggaaaaaaaattaggtgtcggtgatatatcgttagataaaatagacttgcctaatcaaatggttctctttttaaa-aaaaatca 43484  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  43485 aacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccataga 43551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 2e-53; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 268 - 430
Target Start/End: Complemental strand, 7707893 - 7707732
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 367  Q
    ||||||||||||||||| ||||| ||  | |||||| ||||||||||||||||||||||||| ||  |||||||||||||||||||||||  ||||||||    
T  7707893 tagaagatgaagaaaagaaaaaaaata-atgtgttgatggtacatcgtaagataaaatagacctgcctaatccaatggttctcttttaaagaaaaaatca 7707795  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  7707794 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtctacca 7707732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 267 - 434
Target Start/End: Original strand, 2312295 - 2312458
Alignment:
Q  267 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatc 366  Q
    |||||||||||||||| | |||||   |||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||||| ||| |||||||    
T  2312295 gtagaagatgaagaaaggaaaaaa---ttaggtgttggtggtacatcataagataaaataggcctgtctaatccaatggttctctttttaaa-aaaaatc 2312390  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  2312391 aaacagtttaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccataga 2312458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 272 - 434
Target Start/End: Complemental strand, 44498762 - 44498599
Alignment:
Q  272 agatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaaaatcaaac 370  Q
    ||||||| |||||||| || ||||||||||||||| |||||| ||||||||||||||| || |||||| ||||||  |||||||| || |||||||||||    
T  44498762 agatgaaaaaaaggaagaaaatttaggtgttggtgatacatcctaagataaaatagacatgcgtaatctaatggtcatcttttaagaaaaaaaatcaaac 44498663  T
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  44498662 ggttttaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccataga 44498599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 269 - 434
Target Start/End: Complemental strand, 56085650 - 56085485
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| | | ||| | ||| |||||| |||| ||  ||||||||||||| || ||||| |||||| |||  || ||| ||| |||||||||    
T  56085650 agaagatgaagaaaggaataaagaattaagtgttgatggttcactgtaagataaaatacacatgtgtgatccaacggtcatccttttaaaaaaaaatcaa 56085551  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  56085550 acggtttaaattaaaataattaataggatctatggtggaccactcttaaggttagtccaccataga 56085485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 268 - 432
Target Start/End: Complemental strand, 23202150 - 23201987
Alignment:
Q  268 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc--ttttaaaagaaaaat 365  Q
    ||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||| ||  |||| |||||||||||  ||||       ||||    
T  23202150 tagaagatgaagaaaagaaaaaa---ttaggtgttggtggtacatcgtaagataaaatagacctgcttaattcaatggttctctttttttttttttaaat 23202054  T
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||||| |||||||||||||||||||||| |||||||| ||||||||||||| || |||||||||    
T  23202053 caaacggtcgaaattaaaataattaataggacctatggtgtaccactcttaaagatgatccaccata 23201987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 269 - 434
Target Start/End: Original strand, 26496122 - 26496287
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| |  ||||||||||||||   ||| ||| ||| ||| |||||    
T  26496122 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacatctgtgtaatccaatgaccctcattttaaaaaaatatcaa 26496221  T
Q  369 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| |||||| |||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  26496222 acggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccataga 26496287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 34326989 - 34326868
Alignment:
Q  310 catcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacc 409  Q
    ||||||||||||||||| ||||| ||||| ||||||| ||| || |||| ||||  |||||| || ||||| |||||||||||||||||||| || ||||    
T  34326989 catcgtaagataaaatacacttgcgtaattcaatggtcctcgttaaaaaaaaaatacaaacgattaaaatttaaataattaataggatctatagtagacc 34326890  T
Q  410 actcttaaagttggtccaccat 431  Q
    ||||||||||||||||||||||    
T  34326889 actcttaaagttggtccaccat 34326868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 425
Target Start/End: Complemental strand, 36845669 - 36845557
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || || |||||||||||||  |||||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  36845669 cgtaagataaaatacacctgcgtaatccaatggtcatcttttaaaaaaaatatcaaacagtttacattaaaataattaataggacctatggtggaccact 36845570  T
Q  413 cttaaagttggtc 425  Q
    ||||| |||||||    
T  36845569 cttaatgttggtc 36845557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 27850816 - 27850915
Alignment:
Q  337 atccaatggttctcttttaaaagaaaa--atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||| | ||| ||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  27850816 atccaatgatcctcctttaaaaaaaaagaatcaaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccataga 27850915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 313 - 434
Target Start/End: Original strand, 52138648 - 52138771
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctctttt--aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    |||||||||||||| || || ||||||||||    ||| |||  |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  52138648 cgtaagataaaatacacatgcgtaatccaataaccctccttttaaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggacca 52138747  T
Q  411 ctcttaaagttggtccaccataga 434  Q
     |||||||||||||| ||||||||    
T  52138748 ttcttaaagttggtctaccataga 52138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 360 - 434
Target Start/End: Complemental strand, 52240090 - 52240016
Alignment:
Q  360 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  52240090 aaaaatcaaacggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccataga 52240016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 434
Target Start/End: Complemental strand, 13165774 - 13165633
Alignment:
Q  294 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaat 392  Q
    ||||||| | ||||||||  ||||||||||||| |  || |||||||||||  | | ||||||||| ||| ||||||||||| |||||||||||||||||    
T  13165774 ttaggtggtagtggtacacagtaagataaaatacatctgcgtaatccaatgactattcttttaaaaaaaagatcaaacggtttaaattaaaataattaat 13165675  T
Q  393 aggatctatggtggaccactcttaaagttggtccaccataga 434  Q
        ||||||||||||||||||||| ||||||||||||||||    
T  13165674 gaagtctatggtggaccactcttaaggttggtccaccataga 13165633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 412
Target Start/End: Complemental strand, 1520114 - 1519970
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 367  Q
    |||||||||||||| ||| | | | |||||||||| || | || |||||||||||||| ||||  |||||| ||||||  || ||||||||  | |||||    
T  1520114 agaagatgaagaaagggagacataattaggtgttgttgattcaccgtaagataaaatacacttacgtaatctaatggtcatccttttaaaaatataatca 1520015  T
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||    
T  1520014 aacggtttaaattaaaataattaataggatctatggtggatcact 1519970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 314 - 433
Target Start/End: Original strand, 49896441 - 49896561
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||| ||||||| ||  | ||| |||||||||||||||| | |||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  49896441 gtaagatacaatagacatgcatgatctaatggttctcttttaataaaaaatatcaaacggtttaaattaaaataattaacaggatctacagtggaccact 49896540  T
Q  413 cttaaagttggtccaccatag 433  Q
    ||| | |||||||||||||||    
T  49896541 ctttaggttggtccaccatag 49896561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 432
Target Start/End: Complemental strand, 40723484 - 40723367
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| ||  | ||||||||||||| ||| |  |||| ||| |||||||| || | ||| ||||||||||||||||||||||| |||||||    
T  40723484 cgtaagataaaatacaccagcgtaatccaatggtcctcgt--aaaaaaaagatcaaacgattaacatttaaataattaataggatctatggtagaccact 40723387  T
Q  413 cttaaagttggtccaccata 432  Q
    ||||| ||||||||||||||    
T  40723386 cttaaggttggtccaccata 40723367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 432
Target Start/End: Complemental strand, 26630049 - 26629931
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    |||||||||||||| || |  |||||| ||||||  || ||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  26630049 cgtaagataaaatacacctacgtaatctaatggtcatcctttaaaaaaaagatcaaacagtttacattaaaataattaataggacctatggtggaccact 26629950  T
Q  413 cttaaagttggtccaccata 432  Q
    ||| |||||||| |||||||    
T  26629949 ctt-aagttggttcaccata 26629931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 408
Target Start/End: Complemental strand, 27847979 - 27847841
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 368  Q
    |||||||||||||||||||||| | ||||||| | |||||||||  ||||||||||||||| ||||||||| || ||| ||||||   || ||| |||||    
T  27847979 agaagatgaagaaaaggaaaaaaagttaggtggtagtggtacattataagataaaatagacatgtgtaatctaacggtcctctttcttaaaaaagatcaa 27847880  T
Q  369 acggttgaaattaaaataattaataggatctatggtggac 408  Q
    | |||| ||||| ||| |||||||| | ||||||||||||    
T  27847879 agggttaaaattgaaa-aattaataaggtctatggtggac 27847841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 434
Target Start/End: Original strand, 19750135 - 19750272
Alignment:
Q  298 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaatagga 396  Q
    |||||| |||| |||||||||||| |||| || || || ||||||   | || ||||||||| ||| |||||||| || |||||||||||||||||||||    
T  19750135 gtgttgatggttcatcgtaagatagaatacacctgcgtgatccaacaatcctccttttaaaaaaaagatcaaacgatttaaattaaaataattaatagga 19750234  T
Q  397 tctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||||| ||| ||||  || ||||||||||||    
T  19750235 tctatggtggacaacttttaagatttgtccaccataga 19750272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 434
Target Start/End: Complemental strand, 19789671 - 19789534
Alignment:
Q  298 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaatagga 396  Q
    |||||| |||| |||||||||||| |||| || || || ||||||   | || ||||||||| ||| |||||||| || |||||||||||||||||||||    
T  19789671 gtgttgatggttcatcgtaagatagaatacacctgcgtgatccaacaatcctccttttaaaaaaaagatcaaacgatttaaattaaaataattaatagga 19789572  T
Q  397 tctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||||| ||| ||||  || ||||||||||||    
T  19789571 tctatggtggacaacttttaagatttgtccaccataga 19789534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 434
Target Start/End: Complemental strand, 4871695 - 4871632
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  4871695 ggtttaaattaaaataattaataggatctacggtggaccactctttaggttggtccaccataga 4871632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 434
Target Start/End: Complemental strand, 11968713 - 11968650
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  11968713 ggtttaaattaaaataattaataggatctatgatggaccactcttaaggttggtccatcataga 11968650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 314 - 410
Target Start/End: Original strand, 23103866 - 23103962
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||  | |||||||||| ||| || |||||||  ||| ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  23103866 gtaagataaaatagacacgcgtaatccaatagttatccttttaaatcaaagatcaaacggtttaaattaaaa-aattaataggatctatggtggacca 23103962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 411
Target Start/End: Original strand, 38555134 - 38555234
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||| |||||||||||||||||||| |||||  || ||| ||||||||||| ||||||||| | ||||||   |||||||| |||||    
T  38555134 cgtaagataaaatagacatgtgtaatccaatggttctcctttaaataaaaaagatcaaacggtttaaattaaaaaatttaataaagtctatggtagacca 38555233  T
Q  411 c 411  Q
    |    
T  38555234 c 38555234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 1794621 - 1794553
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||||||||| ||||||||| | |||||| | ||||||||||||||||||||| ||||||||||||||    
T  1794621 atcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccaccata 1794553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 434
Target Start/End: Original strand, 15449984 - 15450052
Alignment:
Q  366 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||| ||| |||||||||  ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  15449984 caaacagtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccacgataga 15450052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 434
Target Start/End: Original strand, 41349339 - 41349506
Alignment:
Q  269 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatc 366  Q
    ||||||||||||||| | | ||| | |||||||||| | || || | | ||||| ||||||| ||  ||||| |||||| ||||||||||| ||| ||||    
T  41349339 agaagatgaagaaaatgtacaaaaaattaggtgttgatagtgcaccattagatagaatagacctgcataatcaaatggtcctcttttaaaaaaaataatc 41349438  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||| |||| ||||| ||||||| ||||||| ||||||  ||||||||||| || |||| ||||    
T  41349439 aaacggtttaaataaaaatgattaatatgatctatagtggacatctcttaaagttagttcaccttaga 41349506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 7053402 - 7053321
Alignment:
Q  348 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    ||||||||| | |||| |||||||| || ||||||||| |||||||||||||||||||||| |||||||||  |||||||||    
T  7053402 ctcttttaataaaaaagatcaaacgatttaaattaaaaaaattaataggatctatggtggatcactcttaagattggtccac 7053321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 432
Target Start/End: Original strand, 28590795 - 28590880
Alignment:
Q  348 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||||||| | |||| ||||||| ||| | ||||||||||||||||||||||||| || | |||||||||||||||| |||||||    
T  28590795 ctcttttaataaaaaagatcaaacagtttatattaaaataattaataggatctatgatgaatcactcttaaagttggttcaccata 28590880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 410
Target Start/End: Complemental strand, 45535303 - 45535207
Alignment:
Q  314 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 410  Q
    ||||||||||||||||  | |||||||||| ||| || ||| ||| |||| ||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  45535303 gtaagataaaatagacacgcgtaatccaatagttatccttttaaataaaagatcaaacagtttaaattaaaa-aattaataggatctatggtggacca 45535207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 434
Target Start/End: Complemental strand, 1830009 - 1829891
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||||||| |  |||||| |||||| ||| |||||||   |||||||| |||| | ||||| | |||||||| | |||| | |||||||||    
T  1830009 cgtaagataaaatagacctacgtaatctaatggtcctcctttaaaa---aaatcaaatggttaagattaataaaattaataaggtctacgatggaccact 1829913  T
Q  413 cttaaagttggtccaccataga 434  Q
     ||||||||||||||| |||||    
T  1829912 tttaaagttggtccacgataga 1829891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 434
Target Start/End: Complemental strand, 53432281 - 53432200
Alignment:
Q  353 ttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| ||| ||||||||||| ||||| ||| |||||||| | | |||||||  ||||||||||||||||| |||||||||    
T  53432281 ttaaaaaaaagatcaaacggttaaaattgaaaaaattaataaggtgtatggtgagccactcttaaagttggttcaccataga 53432200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 428
Target Start/End: Original strand, 56157384 - 56157468
Alignment:
Q  345 gttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    |||| ||||||||| |||| ||||||  ||| || |||||| |||||||||||||||||||||| |||||||||  |||||||||    
T  56157384 gttcccttttaaaataaaagatcaaatagttaaagttaaaaaaattaataggatctatggtggaacactcttaagattggtccac 56157468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 8682756 - 8682826
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaa-agttggtccaccataga 434  Q
    |||||| |||||||||||||| |||||||| |||||||| |||||||||||||| | || ||||||||||||    
T  8682756 atcaaagggttgaaattaaaa-aattaatatgatctatgatggaccactcttaagatttagtccaccataga 8682826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 434
Target Start/End: Complemental strand, 6348362 - 6348292
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| |||| |||||| ||  ||||||| | |||| |||||||||||||||| ||||||||||||||||    
T  6348362 atcaaagggttaaaattagaaatattaataaggtctacggtggaccactcttaaggttggtccaccataga 6348292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 374
Target Start/End: Complemental strand, 392633 - 392522
Alignment:
Q  264 aaggtagaagatgaagaa-aag-gaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaa 361  Q
    |||||||||||||||||| ||| |||||| | ||||||||||| || |    |||||||||||||||| | | ||||||| ||||| |||||||||| ||    
T  392633 aaggtagaagatgaagaagaagagaaaaaaaattaggtgttggaggcattcggtaagataaaatagacctctctaatccattggttatcttttaaaa-aa 392535  T
Q  362 aaatcaaacggtt 374  Q
    |||| ||||||||    
T  392534 aaatgaaacggtt 392522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 428
Target Start/End: Complemental strand, 36243747 - 36243663
Alignment:
Q  345 gttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 428  Q
    |||| ||||||||| |||| ||||||||||| || |||||| | | ||||| |||||||||||| |||||||||  |||||||||    
T  36243747 gttcccttttaaaataaaagatcaaacggttaaagttaaaaaattcaatagaatctatggtggaacactcttaagattggtccac 36243663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 408
Target Start/End: Original strand, 37884098 - 37884230
Alignment:
Q  277 aagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaatcaaacggttg 375  Q
    |||||||||||||| | ||||||| | |||||| || |||||||||| ||||| |||| |||||||  || |||||| | ||| ||| |||||| ||||     
T  37884098 aagaaaaggaaaaaaaattaggtggtagtggtatatggtaagataaattagacatgtgcaatccaaccgtcctctttcttaaaaaaagatcaaagggtta 37884197  T
Q  376 aaattaaaataattaataggatctatggtggac 408  Q
    |||||  || | |||||| | ||||||||||||    
T  37884198 aaattggaaaatttaataaggtctatggtggac 37884230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 434
Target Start/End: Complemental strand, 33231597 - 33231528
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||| |||||||||||||| |||||||||  | ||||||||||||||  ||| ||| ||||||||||||    
T  33231597 atcaaatggttgaaattaaaa-aattaatagagtttatggtggaccacttctaaggtttgtccaccataga 33231528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 434
Target Start/End: Original strand, 42810115 - 42810181
Alignment:
Q  368 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||| ||||||||| | |||||| | |||||||||||| ||||||||  ||||| |||||||||    
T  42810115 aacggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccataga 42810181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 53435661 - 53435731
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||||| ||| |||||||    |||| |||||||||||||||| ||||||| ||||||||    
T  53435661 atcaaacggttaaaatttaaaaaattaatgaagtctacggtggaccactcttaaggttggtctaccataga 53435731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 4714195 - 4714158
Alignment:
Q  397 tctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  4714195 tctatggtggaccactcttaaggttgatccaccataga 4714158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 40724729 - 40724786
Alignment:
Q  269 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaata 326  Q
    |||||||||||||||||||| | | |||  |||||||||||||||| |||||| ||||    
T  40724729 agaagatgaagaaaaggaaacaaagttatatgttggtggtacatcgcaagatataata 40724786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 411
Target Start/End: Original strand, 35350024 - 35350064
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    |||| ||||||||| |||||||| |||||||||||||||||    
T  35350024 ggttaaaattaaaagaattaataagatctatggtggaccac 35350064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 38370501 - 38370441
Alignment:
Q  351 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    |||||||| ||| |||||| |||| ||||||||  |||| ||| |||||||||||||||||    
T  38370501 ttttaaaaaaaatatcaaagggttaaaattaaatgaatttataagatctatggtggaccac 38370441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 411
Target Start/End: Original strand, 39057683 - 39057723
Alignment:
Q  371 ggttgaaattaaaataattaataggatctatggtggaccac 411  Q
    |||| ||||||||| |||||||| |||||||||||||||||    
T  39057683 ggttaaaattaaaagaattaataagatctatggtggaccac 39057723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 267 - 434
Target Start/End: Original strand, 53997 - 54161
Alignment:
Q  267 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatc 366  Q
    |||||||||||| |||||||||||   | ||||||||||||||||||||| |||||||||||||||  ||||||||||   |||||||  || |||||||    
T  53997 gtagaagatgaacaaaaggaaaaa---tcaggtgttggtggtacatcgtatgataaaatagacttgcttaatccaatgacactcttttttaaaaaaaatc 54093  T
Q  367 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  54094 aaacagtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccataga 54161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 313 - 434
Target Start/End: Complemental strand, 127692 - 127571
Alignment:
Q  313 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 412  Q
    ||||||||||||||||| ||| ||||| ||| |||||| ||| ||| ||||||| ||||||| |||||||||  ||||||||||||||||||||||||||    
T  127692 cgtaagataaaatagacctgtttaatctaatcgttctccttttaaaaaaaaatctaacggtttaaattaaaaacattaataggatctatggtggaccact 127593  T
Q  413 cttaaagttggtccaccataga 434  Q
    ||||| |||| | |||||||||    
T  127592 cttaaggttgtttcaccataga 127571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 434
Target Start/End: Original strand, 8000 - 8168
Alignment:
Q  269 agaagatgaagaaaagg---aaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aa 364  Q
    ||||||||||||||||    ||||| | |||||||||| |||| || | | ||||||||||||||||  | ||| |||||| ||||||||||| ||| ||    
T  8000 agaagatgaagaaaagataaaaaaaaaattaggtgttgatggtgcaccattagataaaatagacttgcatgatcaaatggtcctcttttaaaaaaaacaa 8099  T
Q  365 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||| ||||||| |||| |||||||||||    
T  8100 tcaaacggtttaaattaaaataattaatataatctatgatggacc-ctcttaaggttgatccaccataga 8168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 427
Target Start/End: Original strand, 461 - 652
Alignment:
Q  237 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaa--aggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtg 334  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||  | |||||| ||| || ||||| ||||||  |||||| ||  |||||   |      
T  461 tgtgagttgaagatgatgaagattagtaaggtagaagatgaagaaataaagaaaaaaatt-agttgttgttggtactccgtaagttacgatagaac-gca 558  T
Q  335 taatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtcca 427  Q
    ||||||||||||  |||||| ||| || | ||||||||||| ||||||||| | |||||| | ||||||||||||||||||||| |||||||||    
T  559 taatccaatggtcatctttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtcca 652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 108725 - 108654
Alignment:
Q  361 aaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    ||||||||| |||| |||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  108725 aaaatcaaaaggtttaaattataataattaatagcatctatggtggaccacttttaaggttggtccaccata 108654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 435
Target Start/End: Complemental strand, 124240 - 124105
Alignment:
Q  300 gttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatc 398  Q
    |||| |||||||  ||||| || ||||||| ||  |||||| |||||| |||||| ||| || | |||||||| || ||||||| | | |||||| ||||    
T  124240 gttgttggtacactgtaagttacaatagacatgcataatcctatggttatctttttaaaaaatagatcaaacgatttaaattaaca-atttaatacgatc 124142  T
Q  399 tatggtggaccactcttaaagttggtccaccatagat 435  Q
    ||||||||||||||||||| |||||||||||||||||    
T  124141 tatggtggaccactcttaaggttggtccaccatagat 124105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 125138 - 125207
Alignment:
Q  364 atcaaacggttgaaattaaaataatt-aataggatctatggtggaccactcttaaagttggtccaccata 432  Q
    |||||| |||| ||||||||| |||| |||| | |||||||||||||||| |||| ||||||||| ||||    
T  125138 atcaaagggtttaaattaaaaaaatttaataaggtctatggtggaccacttttaaggttggtccatcata 125207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 434
Target Start/End: Complemental strand, 32790 - 32708
Alignment:
Q  354 taaaagaaaaatcaaacggttgaaattaaaataat--taataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||| ||| ||||||||||| ||||||||| ||   |||||||||||||| |||||||||| ||| ||||||||||||||||    
T  32790 taaaaaaaagatcaaacggtttaaattaaaaaaaaaataataggatctatgatggaccactcctaaggttggtccaccataga 32708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 434
Target Start/End: Complemental strand, 21335 - 21265
Alignment:
Q  364 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccataga 434  Q
    ||||||||||| ||||| ||| |||||||    |||||||||||||||||| || ||||||||||||||||    
T  21335 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactctgaaggttggtccaccataga 21265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 433
Target Start/End: Complemental strand, 22190 - 22119
Alignment:
Q  362 aaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatag 433  Q
    |||||||| |||| ||||||||  |||||||||| |||||||||||||||    || |||||||||||||||    
T  22190 aaatcaaatggtttaaattaaagaaattaatagggtctatggtggaccacctacaatgttggtccaccatag 22119  T

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Target: scaffold0128; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 23047 - 23086
Alignment:
Q  243 ttgaagatgatgaagatttataaggtagaagatgaagaaa 282  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  23047 ttgaagatgatgaagattaataaggttgaagatgaagaaa 23086  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 318
Target Start/End: Original strand, 62914 - 62992
Alignment:
Q  240 gagttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaag 318  Q
    ||||||||||||||||| |||  |||| |||||||| ||||||   ||||| | |||||||||| ||||||| ||||||    
T  62914 gagttgaagatgatgaatattagtaagatagaagataaagaaagaaaaaaaaaattaggtgttgttggtacaccgtaag 62992  T

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