View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16742_low_9 (Length: 442)

Name: NF16742_low_9
Description: NF16742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16742_low_9
NF16742_low_9
[»] chr7 (56 HSPs)
chr7 (27-425)||(44724235-44724629)
chr7 (27-233)||(21679875-21680077)
chr7 (35-330)||(22828880-22829171)
chr7 (27-207)||(39146226-39146402)
chr7 (27-195)||(21677952-21678116)
chr7 (35-333)||(27832880-27833196)
chr7 (27-206)||(24748470-24748644)
chr7 (27-178)||(25276044-25276191)
chr7 (27-128)||(11355207-11355308)
chr7 (27-128)||(20137348-20137449)
chr7 (27-122)||(37412367-37412462)
chr7 (27-123)||(18567567-18567663)
chr7 (262-330)||(21677796-21677864)
chr7 (27-123)||(31435286-31435382)
chr7 (27-128)||(4296174-4296276)
chr7 (73-205)||(20091826-20091954)
chr7 (29-123)||(27306470-27306564)
chr7 (27-123)||(44518-44614)
chr7 (27-123)||(443549-443645)
chr7 (262-330)||(24748346-24748414)
chr7 (27-123)||(1049534-1049630)
chr7 (27-123)||(31156150-31156246)
chr7 (27-200)||(7188424-7188592)
chr7 (1-122)||(21990106-21990237)
chr7 (27-117)||(24258423-24258513)
chr7 (27-123)||(35583-35679)
chr7 (27-123)||(13099715-13099811)
chr7 (27-123)||(22251781-22251877)
chr7 (27-123)||(40836981-40837077)
chr7 (265-328)||(21679759-21679822)
chr7 (27-123)||(25542485-25542580)
chr7 (262-330)||(39146456-39146524)
chr7 (35-123)||(42331246-42331334)
chr7 (27-123)||(26804527-26804619)
chr7 (27-123)||(38393936-38394036)
chr7 (27-125)||(42223108-42223207)
chr7 (29-123)||(3035671-3035769)
chr7 (27-121)||(7470261-7470359)
chr7 (27-67)||(18345551-18345591)
chr7 (27-67)||(20626048-20626088)
chr7 (27-67)||(20629939-20629979)
chr7 (27-67)||(20642358-20642398)
chr7 (27-67)||(28485576-28485616)
chr7 (27-67)||(28487563-28487603)
chr7 (27-67)||(38396326-38396366)
chr7 (27-67)||(40946338-40946378)
chr7 (27-67)||(48457663-48457703)
chr7 (1-103)||(21592345-21592458)
chr7 (1-36)||(48457705-48457740)
chr7 (73-122)||(3677235-3677284)
chr7 (34-67)||(7351898-7351931)
chr7 (27-121)||(7472219-7472317)
chr7 (27-67)||(1849991-1850031)
chr7 (27-67)||(3878587-3878627)
chr7 (27-67)||(7349512-7349552)
chr7 (55-123)||(22392427-22392495)
[»] chr8 (49 HSPs)
chr8 (27-334)||(33541627-33541930)
chr8 (27-276)||(27107136-27107380)
chr8 (27-206)||(14477197-14477372)
chr8 (1-123)||(18812893-18813015)
chr8 (35-206)||(15185957-15186124)
chr8 (27-123)||(14419430-14419526)
chr8 (29-139)||(5372419-5372528)
chr8 (38-198)||(25952450-25952606)
chr8 (27-123)||(1225166-1225262)
chr8 (27-127)||(5622977-5623077)
chr8 (27-123)||(18810708-18810804)
chr8 (27-206)||(26775123-26775297)
chr8 (42-128)||(35872632-35872718)
chr8 (27-128)||(13858723-13858824)
chr8 (27-128)||(30480742-30480843)
chr8 (27-122)||(36865538-36865634)
chr8 (262-331)||(27107387-27107456)
chr8 (27-123)||(3886157-3886253)
chr8 (27-123)||(4424018-4424114)
chr8 (27-123)||(14807751-14807847)
chr8 (262-330)||(26774978-26775046)
chr8 (27-123)||(27826986-27827082)
chr8 (27-123)||(27829297-27829393)
chr8 (27-146)||(27910992-27911110)
chr8 (27-146)||(27957411-27957529)
chr8 (2-123)||(15072710-15072842)
chr8 (51-146)||(21482301-21482394)
chr8 (27-123)||(41382673-41382769)
chr8 (27-123)||(28251806-28251902)
chr8 (35-123)||(44720843-44720931)
chr8 (28-123)||(181537-181632)
chr8 (1-123)||(15067981-15068114)
chr8 (27-123)||(15809215-15809315)
chr8 (27-123)||(32339305-32339405)
chr8 (36-95)||(37214458-37214517)
chr8 (51-123)||(2468361-2468433)
chr8 (27-67)||(12517263-12517303)
chr8 (27-67)||(24873420-24873460)
chr8 (1-36)||(608832-608867)
chr8 (1-36)||(3874108-3874143)
chr8 (1-36)||(30480705-30480740)
chr8 (1-36)||(33541590-33541625)
chr8 (1-36)||(37214393-37214428)
chr8 (78-123)||(14419787-14419832)
chr8 (27-67)||(3874066-3874106)
chr8 (262-330)||(15186179-15186247)
chr8 (27-67)||(22684895-22684935)
chr8 (27-67)||(28283458-28283498)
chr8 (27-67)||(43079658-43079698)
[»] chr3 (97 HSPs)
chr3 (1-331)||(28137506-28137832)
chr3 (27-277)||(43421652-43421897)
chr3 (27-234)||(1626920-1627123)
chr3 (35-234)||(36011644-36011839)
chr3 (27-331)||(28100278-28100599)
chr3 (27-206)||(43423700-43423877)
chr3 (1-206)||(53468656-53468867)
chr3 (27-229)||(5927001-5927202)
chr3 (27-278)||(28102239-28102486)
chr3 (27-138)||(47701832-47701943)
chr3 (27-186)||(28180889-28181042)
chr3 (1-122)||(51674966-51675087)
chr3 (1-123)||(5522826-5522948)
chr3 (1-123)||(53591119-53591241)
chr3 (27-146)||(54884058-54884177)
chr3 (27-128)||(3314603-3314704)
chr3 (27-254)||(23633257-23633479)
chr3 (27-122)||(6231374-6231469)
chr3 (86-206)||(4663764-4663880)
chr3 (27-128)||(880689-880790)
chr3 (34-122)||(3306724-3306812)
chr3 (27-123)||(51943295-51943391)
chr3 (1-116)||(32219026-32219141)
chr3 (262-328)||(1627172-1627238)
chr3 (27-123)||(3859452-3859548)
chr3 (27-123)||(15780784-15780880)
chr3 (27-117)||(6561740-6561830)
chr3 (261-331)||(36011526-36011596)
chr3 (43-128)||(890024-890109)
chr3 (1-123)||(43226010-43226142)
chr3 (27-123)||(11170328-11170424)
chr3 (27-123)||(26720472-26720568)
chr3 (27-123)||(43228215-43228311)
chr3 (27-122)||(10956264-10956359)
chr3 (27-129)||(54691811-54691912)
chr3 (262-331)||(5927256-5927325)
chr3 (27-254)||(23636824-23637046)
chr3 (27-128)||(28761665-28761766)
chr3 (27-123)||(4308518-4308614)
chr3 (27-123)||(5191577-5191673)
chr3 (262-330)||(7754063-7754131)
chr3 (27-123)||(11163074-11163170)
chr3 (27-123)||(22114542-22114638)
chr3 (27-123)||(35777345-35777441)
chr3 (27-123)||(39715394-39715489)
chr3 (27-123)||(45882863-45882959)
chr3 (27-122)||(10958560-10958655)
chr3 (267-330)||(43423937-43424000)
chr3 (27-123)||(18162588-18162683)
chr3 (27-123)||(18097137-18097234)
chr3 (34-123)||(51727250-51727339)
chr3 (27-123)||(1313334-1313429)
chr3 (27-123)||(24979631-24979727)
chr3 (27-123)||(455827-455927)
chr3 (27-123)||(458204-458304)
chr3 (27-123)||(32264276-32264376)
chr3 (27-123)||(6066033-6066130)
chr3 (38-123)||(12268214-12268299)
chr3 (27-123)||(18099407-18099503)
chr3 (290-330)||(8183209-8183249)
chr3 (27-123)||(35918186-35918282)
chr3 (27-123)||(47149132-47149233)
chr3 (27-123)||(48361908-48362003)
chr3 (27-123)||(53915733-53915829)
chr3 (27-123)||(4104132-4104232)
chr3 (27-123)||(6063683-6063781)
chr3 (27-128)||(31151266-31151368)
chr3 (261-333)||(28102490-28102563)
chr3 (47-123)||(1321365-1321441)
chr3 (27-83)||(10621767-10621823)
chr3 (27-67)||(25533422-25533462)
chr3 (27-67)||(27101418-27101458)
chr3 (27-67)||(30005821-30005861)
chr3 (27-67)||(42990284-42990324)
chr3 (27-123)||(50493923-50494019)
chr3 (73-145)||(53597143-53597215)
chr3 (27-123)||(53917901-53917997)
chr3 (1-36)||(4308481-4308516)
chr3 (60-123)||(6484309-6484372)
chr3 (1-36)||(10084589-10084624)
chr3 (1-36)||(10191509-10191544)
chr3 (1-36)||(18097100-18097135)
chr3 (1-36)||(18099370-18099405)
chr3 (27-122)||(27635864-27635959)
chr3 (1-36)||(30005863-30005898)
chr3 (1-36)||(32264239-32264274)
chr3 (292-331)||(43421933-43421972)
chr3 (162-228)||(562129-562195)
chr3 (26-128)||(4560501-4560603)
chr3 (215-277)||(43423865-43423926)
chr3 (27-67)||(746737-746777)
chr3 (95-200)||(1673826-1673927)
chr3 (74-146)||(13420456-13420528)
chr3 (27-67)||(25388886-25388926)
chr3 (27-67)||(38210350-38210390)
chr3 (27-67)||(38890020-38890060)
chr3 (27-67)||(42992266-42992306)
[»] chr2 (48 HSPs)
chr2 (27-330)||(22163186-22163485)
chr2 (27-330)||(11739799-11740078)
chr2 (27-278)||(15539714-15539962)
chr2 (29-204)||(38019986-38020157)
chr2 (27-204)||(3022006-3022179)
chr2 (27-206)||(34979818-34979993)
chr2 (27-234)||(14837087-14837289)
chr2 (27-146)||(44289307-44289426)
chr2 (27-123)||(22407648-22407744)
chr2 (27-123)||(42452703-42452799)
chr2 (30-128)||(17849032-17849130)
chr2 (27-128)||(31733004-31733105)
chr2 (27-123)||(13910283-13910379)
chr2 (27-123)||(19504584-19504680)
chr2 (27-123)||(40032297-40032393)
chr2 (27-123)||(42064435-42064531)
chr2 (27-123)||(22287575-22287671)
chr2 (27-123)||(24162451-24162547)
chr2 (2-128)||(19007555-19007692)
chr2 (27-122)||(19502250-19502345)
chr2 (27-128)||(28196552-28196653)
chr2 (262-330)||(3021839-3021907)
chr2 (27-123)||(27104719-27104815)
chr2 (269-330)||(14836971-14837032)
chr2 (51-123)||(18800565-18800637)
chr2 (264-328)||(34980072-34980136)
chr2 (27-123)||(43623807-43623903)
chr2 (215-277)||(38019933-38019996)
chr2 (1-122)||(6264351-6264479)
chr2 (27-128)||(17848360-17848459)
chr2 (286-331)||(15539991-15540036)
chr2 (51-146)||(37963190-37963285)
chr2 (1-123)||(21520895-21521030)
chr2 (73-146)||(12342695-12342767)
chr2 (35-83)||(5377676-5377724)
chr2 (27-67)||(23452476-23452516)
chr2 (27-67)||(38020178-38020218)
chr2 (34-123)||(42923755-42923846)
chr2 (1-36)||(22407611-22407646)
chr2 (1-36)||(23452439-23452474)
chr2 (1-36)||(40032260-40032295)
chr2 (94-146)||(17897548-17897601)
chr2 (27-123)||(45280223-45280320)
chr2 (27-123)||(6259054-6259150)
chr2 (27-123)||(11578344-11578439)
chr2 (1-33)||(34979781-34979813)
chr2 (85-128)||(35028494-35028538)
chr2 (27-67)||(35215825-35215865)
[»] chr5 (59 HSPs)
chr5 (1-330)||(695631-695955)
chr5 (27-233)||(10474562-10474764)
chr5 (27-232)||(39398232-39398431)
chr5 (27-233)||(17072721-17072923)
chr5 (27-234)||(24126693-24126896)
chr5 (73-234)||(2723804-2723961)
chr5 (27-206)||(20042915-20043090)
chr5 (27-206)||(20044875-20045050)
chr5 (27-206)||(34530905-34531079)
chr5 (1-129)||(25904041-25904180)
chr5 (27-128)||(31472852-31472953)
chr5 (27-116)||(17818729-17818817)
chr5 (27-123)||(4236573-4236669)
chr5 (27-123)||(31179610-31179706)
chr5 (27-123)||(40221466-40221562)
chr5 (1-123)||(2818538-2818671)
chr5 (38-123)||(20507712-20507797)
chr5 (27-123)||(38882049-38882146)
chr5 (27-123)||(2174863-2174959)
chr5 (27-123)||(12556162-12556258)
chr5 (27-123)||(25921712-25921808)
chr5 (27-123)||(31542679-31542775)
chr5 (27-123)||(31545024-31545120)
chr5 (27-123)||(37706019-37706115)
chr5 (274-327)||(2723698-2723751)
chr5 (270-331)||(20044756-20044817)
chr5 (27-123)||(21947971-21948066)
chr5 (27-123)||(26098490-26098586)
chr5 (27-123)||(39854428-39854523)
chr5 (1-123)||(6756438-6756571)
chr5 (1-67)||(10586842-10586909)
chr5 (28-123)||(41585946-41586041)
chr5 (269-330)||(24126579-24126640)
chr5 (27-83)||(27912520-27912576)
chr5 (1-123)||(1189811-1189949)
chr5 (1-123)||(10529301-10529434)
chr5 (28-123)||(26097677-26097772)
chr5 (51-128)||(36208519-36208597)
chr5 (27-123)||(16776101-16776198)
chr5 (28-122)||(18466625-18466723)
chr5 (27-67)||(4410061-4410101)
chr5 (27-67)||(6747306-6747346)
chr5 (27-83)||(15552229-15552285)
chr5 (27-67)||(18469011-18469051)
chr5 (262-330)||(20042770-20042838)
chr5 (27-67)||(34477293-34477333)
chr5 (27-67)||(34479658-34479698)
chr5 (27-121)||(18509557-18509652)
chr5 (1-36)||(25921675-25921710)
chr5 (1-36)||(36402530-36402565)
chr5 (265-304)||(42770523-42770562)
chr5 (27-115)||(2954368-2954456)
chr5 (27-123)||(18596591-18596685)
chr5 (3-36)||(21288806-21288839)
chr5 (27-67)||(16092439-16092479)
chr5 (261-313)||(17072619-17072671)
chr5 (27-67)||(21684690-21684730)
chr5 (27-67)||(25804025-25804065)
chr5 (27-123)||(36402567-36402663)
[»] chr6 (56 HSPs)
chr6 (27-331)||(3630103-3630423)
chr6 (27-278)||(13039582-13039829)
chr6 (29-277)||(25477103-25477347)
chr6 (27-277)||(3632177-3632420)
chr6 (27-278)||(13057022-13057269)
chr6 (28-234)||(24338688-24338890)
chr6 (27-234)||(12161794-12161996)
chr6 (27-206)||(10584026-10584196)
chr6 (27-206)||(22490539-22490715)
chr6 (29-206)||(13870663-13870835)
chr6 (2-203)||(14466237-14466433)
chr6 (95-234)||(20220000-20220135)
chr6 (262-330)||(24338960-24339028)
chr6 (95-204)||(22114014-22114119)
chr6 (27-128)||(32447555-32447656)
chr6 (27-123)||(3390358-3390454)
chr6 (27-123)||(8995458-8995554)
chr6 (27-123)||(9019905-9020001)
chr6 (27-123)||(1072116-1072212)
chr6 (262-330)||(13039509-13039577)
chr6 (27-123)||(19227647-19227743)
chr6 (35-129)||(3233978-3234071)
chr6 (261-330)||(3632425-3632494)
chr6 (262-330)||(13056949-13057017)
chr6 (27-123)||(14507414-14507510)
chr6 (27-123)||(17852521-17852617)
chr6 (27-123)||(11983268-11983364)
chr6 (27-123)||(15532920-15533016)
chr6 (27-123)||(15541379-15541475)
chr6 (27-123)||(28241560-28241656)
chr6 (27-123)||(30729067-30729163)
chr6 (262-332)||(13870841-13870911)
chr6 (86-206)||(3028148-3028265)
chr6 (27-123)||(12195754-12195850)
chr6 (52-128)||(15346365-15346441)
chr6 (27-123)||(15530361-15530457)
chr6 (262-330)||(22490415-22490483)
chr6 (27-123)||(30034842-30034942)
chr6 (262-328)||(10583884-10583950)
chr6 (27-116)||(14459004-14459093)
chr6 (85-206)||(25466467-25466583)
chr6 (27-67)||(1230488-1230528)
chr6 (27-67)||(2629124-2629164)
chr6 (27-67)||(4816470-4816510)
chr6 (27-67)||(19704808-19704848)
chr6 (27-67)||(26065021-26065061)
chr6 (27-67)||(26084990-26085030)
chr6 (27-123)||(32279976-32280071)
chr6 (1-36)||(1072079-1072114)
chr6 (1-36)||(1230451-1230486)
chr6 (1-36)||(28241523-28241558)
chr6 (1-36)||(30967278-30967313)
chr6 (262-304)||(20219938-20219980)
chr6 (34-123)||(20915602-20915693)
chr6 (264-325)||(14466136-14466197)
chr6 (80-128)||(11138277-11138325)
[»] chr1 (79 HSPs)
chr1 (27-329)||(25251516-25251814)
chr1 (28-331)||(25248756-25249055)
chr1 (27-277)||(18839382-18839627)
chr1 (1-202)||(31489784-31489990)
chr1 (1-234)||(50248776-50249016)
chr1 (27-204)||(17186369-17186542)
chr1 (36-278)||(17323858-17324096)
chr1 (27-122)||(18307054-18307149)
chr1 (27-128)||(11457716-11457817)
chr1 (29-146)||(31423117-31423234)
chr1 (27-128)||(50076913-50077014)
chr1 (27-128)||(17318832-17318933)
chr1 (27-123)||(6756471-6756567)
chr1 (262-330)||(17323785-17323853)
chr1 (28-128)||(50079063-50079163)
chr1 (27-123)||(51749983-51750079)
chr1 (27-123)||(13215025-13215121)
chr1 (27-123)||(15823490-15823586)
chr1 (27-123)||(41646864-41646960)
chr1 (262-333)||(50249065-50249136)
chr1 (27-123)||(2949472-2949568)
chr1 (27-123)||(13761781-13761877)
chr1 (27-123)||(16226111-16226207)
chr1 (27-123)||(17324877-17324973)
chr1 (27-123)||(20302403-20302499)
chr1 (27-123)||(28207307-28207403)
chr1 (27-123)||(38925719-38925815)
chr1 (27-123)||(47451592-47451688)
chr1 (27-102)||(31425260-31425335)
chr1 (1-67)||(16432405-16432471)
chr1 (262-332)||(17186620-17186690)
chr1 (27-128)||(16428592-16428693)
chr1 (27-128)||(50307788-50307889)
chr1 (27-123)||(6822959-6823055)
chr1 (27-146)||(9241327-9241446)
chr1 (27-123)||(31735762-31735862)
chr1 (27-124)||(2617459-2617556)
chr1 (38-123)||(51752309-51752394)
chr1 (27-123)||(6995941-6996037)
chr1 (27-123)||(10400069-10400165)
chr1 (27-123)||(12302746-12302847)
chr1 (27-123)||(20291401-20291497)
chr1 (27-123)||(28998494-28998590)
chr1 (27-123)||(29004210-29004306)
chr1 (27-123)||(28842437-28842535)
chr1 (264-331)||(31489726-31489793)
chr1 (52-146)||(14183852-14183945)
chr1 (73-123)||(30790681-30790731)
chr1 (85-200)||(43104030-43104141)
chr1 (27-123)||(6823828-6823925)
chr1 (78-131)||(18800861-18800914)
chr1 (27-128)||(42922173-42922273)
chr1 (55-128)||(49495468-49495541)
chr1 (27-67)||(4131620-4131660)
chr1 (27-67)||(9463485-9463525)
chr1 (27-123)||(14098211-14098307)
chr1 (27-67)||(15295075-15295115)
chr1 (27-123)||(16231545-16231641)
chr1 (27-67)||(21948428-21948468)
chr1 (27-67)||(25127872-25127912)
chr1 (27-67)||(39932073-39932113)
chr1 (1-36)||(4131583-4131618)
chr1 (289-328)||(18839311-18839350)
chr1 (1-36)||(21948391-21948426)
chr1 (1-36)||(24325705-24325740)
chr1 (27-123)||(28840622-28840720)
chr1 (1-36)||(38925682-38925717)
chr1 (73-128)||(40133874-40133929)
chr1 (1-36)||(48665219-48665254)
chr1 (2-36)||(6995905-6995939)
chr1 (29-67)||(27337181-27337219)
chr1 (73-146)||(16431022-16431095)
chr1 (34-67)||(48665177-48665210)
chr1 (27-67)||(9459658-9459698)
chr1 (1-33)||(28207270-28207302)
chr1 (27-123)||(39462463-39462559)
chr1 (27-67)||(46431948-46431988)
chr1 (27-67)||(47177362-47177402)
chr1 (27-67)||(47179713-47179753)
[»] chr4 (74 HSPs)
chr4 (27-330)||(38270225-38270543)
chr4 (27-206)||(2891235-2891411)
chr4 (27-243)||(3937448-3937659)
chr4 (34-234)||(6132764-6132959)
chr4 (27-206)||(18409586-18409759)
chr4 (240-331)||(47564497-47564588)
chr4 (27-128)||(12396084-12396185)
chr4 (27-128)||(12401046-12401147)
chr4 (42-128)||(24446833-24446919)
chr4 (262-331)||(6132646-6132715)
chr4 (27-128)||(19095875-19095976)
chr4 (27-123)||(11434953-11435049)
chr4 (27-123)||(51015244-51015340)
chr4 (1-123)||(17662447-17662573)
chr4 (27-128)||(38928417-38928518)
chr4 (27-128)||(41997485-41997586)
chr4 (27-123)||(22044629-22044725)
chr4 (27-123)||(22801101-22801197)
chr4 (27-123)||(22802973-22803069)
chr4 (27-123)||(36378290-36378386)
chr4 (27-123)||(40637072-40637168)
chr4 (27-123)||(47274725-47274821)
chr4 (27-123)||(48486317-48486413)
chr4 (28-123)||(36919825-36919922)
chr4 (28-122)||(37313306-37313400)
chr4 (34-123)||(5198418-5198507)
chr4 (34-123)||(24888794-24888883)
chr4 (27-128)||(33415726-33415827)
chr4 (27-123)||(5100995-5101091)
chr4 (27-123)||(9174385-9174481)
chr4 (27-123)||(22046924-22047020)
chr4 (27-123)||(24878987-24879083)
chr4 (27-123)||(24880449-24880545)
chr4 (27-123)||(31849838-31849934)
chr4 (28-123)||(619687-619782)
chr4 (27-123)||(7941317-7941415)
chr4 (27-122)||(56030443-56030538)
chr4 (27-121)||(9176713-9176807)
chr4 (34-123)||(40091661-40091750)
chr4 (27-123)||(6764837-6764933)
chr4 (27-123)||(14633318-14633413)
chr4 (27-123)||(16453307-16453403)
chr4 (27-123)||(47868399-47868495)
chr4 (281-331)||(27498964-27499014)
chr4 (94-198)||(31983837-31983937)
chr4 (27-123)||(2485111-2485208)
chr4 (27-123)||(37089610-37089709)
chr4 (27-123)||(16934382-16934478)
chr4 (27-123)||(18847151-18847247)
chr4 (27-123)||(44600077-44600173)
chr4 (27-146)||(15032776-15032894)
chr4 (27-123)||(47210979-47211081)
chr4 (27-117)||(19322701-19322790)
chr4 (51-123)||(18537733-18537806)
chr4 (27-123)||(36921733-36921830)
chr4 (27-67)||(8631658-8631698)
chr4 (27-67)||(11006476-11006516)
chr4 (27-67)||(11008805-11008845)
chr4 (27-123)||(16932028-16932124)
chr4 (27-67)||(18709402-18709442)
chr4 (27-67)||(22134854-22134894)
chr4 (174-206)||(27499076-27499108)
chr4 (27-67)||(52942685-52942725)
chr4 (27-67)||(53405184-53405224)
chr4 (1-36)||(9148349-9148384)
chr4 (27-123)||(14787670-14787768)
chr4 (1-36)||(26086178-26086213)
chr4 (78-123)||(8756540-8756585)
chr4 (298-330)||(2891134-2891166)
chr4 (27-67)||(5637704-5637744)
chr4 (73-125)||(12102086-12102138)
chr4 (290-330)||(18537989-18538029)
chr4 (27-67)||(22132629-22132669)
chr4 (35-67)||(24348272-24348304)
[»] scaffold0011 (1 HSPs)
scaffold0011 (27-136)||(35580-35688)
[»] scaffold0004 (1 HSPs)
scaffold0004 (27-128)||(79807-79908)
[»] scaffold0031 (1 HSPs)
scaffold0031 (27-121)||(79140-79234)
[»] scaffold0339 (1 HSPs)
scaffold0339 (27-123)||(3950-4046)
[»] scaffold0250 (1 HSPs)
scaffold0250 (27-123)||(2833-2929)
[»] scaffold0154 (1 HSPs)
scaffold0154 (27-123)||(11712-11808)
[»] scaffold0131 (1 HSPs)
scaffold0131 (29-123)||(14972-15066)
[»] scaffold0038 (2 HSPs)
scaffold0038 (27-123)||(41722-41818)
scaffold0038 (1-36)||(41685-41720)
[»] scaffold0552 (1 HSPs)
scaffold0552 (27-123)||(1070-1166)
[»] scaffold0005 (2 HSPs)
scaffold0005 (27-123)||(183879-183974)
scaffold0005 (27-123)||(51962-52060)
[»] scaffold0472 (1 HSPs)
scaffold0472 (27-123)||(6152-6248)
[»] scaffold0511 (1 HSPs)
scaffold0511 (27-82)||(2036-2091)
[»] scaffold0224 (1 HSPs)
scaffold0224 (27-128)||(16058-16158)
[»] scaffold0025 (4 HSPs)
scaffold0025 (27-67)||(69530-69570)
scaffold0025 (1-36)||(69493-69528)
scaffold0025 (1-36)||(73225-73260)
scaffold0025 (27-67)||(73262-73302)
[»] scaffold0045 (1 HSPs)
scaffold0045 (27-128)||(85179-85279)
[»] scaffold0267 (1 HSPs)
scaffold0267 (27-67)||(50-90)
[»] scaffold0068 (1 HSPs)
scaffold0068 (27-67)||(29180-29220)


Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 27 - 425
Target Start/End: Complemental strand, 44724629 - 44724235
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44724629 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctatatctccaggtttacactgatacaatgtctatatttatagtaaaagaat 44724530  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    ||||||||||||| ||||||   ||||||||||||||| ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  44724529 cctcaataaaactagaacaa---atctaggtccgaaaa-tacgtttctgttttattttctgctatcaaaatcagccaccgtgctcaccaaatcggccacc 44724434  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcac 326  Q
    ||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  44724433 gatttttgtcgaatcaacagacaaaaaaccagagttgaaaatcggccaccgattttcagcttccagaatttcaattttttcaattttgaggcacgttcac 44724334  T
Q  327 aacaaaatacactctgatcagagtgtaaaatggagctgaactaaagaaaaaattgtttaaaaaatatcatttaccattgtttcagttatggagctttgt 425  Q
    ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44724333 aacaaatcacactctgatcagagtgtaaaatggagctgaactaaaggaaaaattgtttaaaaaatatcatttaccattgtttcagttatggagttttgt 44724235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 27 - 233
Target Start/End: Complemental strand, 21680077 - 21679875
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  21680077 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaat 21679978  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg--tgctcaccaaatcggcca 224  Q
    ||||||| ||||||||   ||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||| |  ||||||  ||||||||||    
T  21679977 cctcaattaaactgga---acaaatctaggcccg-aaaatacgtttctattttattttctgctgtcaaaatcggccactgaatgctca--aaatcggcca 21679884  T
Q  225 ccgattttt 233  Q
    || ||||||    
T  21679883 ccaattttt 21679875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 35 - 330
Target Start/End: Original strand, 22828880 - 22829171
Alignment:
Q  35 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 134  Q
    ||||||||||||||||||||||||  ||||||| ||  |||| |||||| |||||||| | |||||||   |||||||||||||||||| ||||   |||    
T  22828880 tagttttgttgttgcctttctaaactcttgtttcagccccctctatctcaaggtttactcggatacaaagcctatatttatagtaaaagtatccctcata 22828979  T
Q  135 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgct-caccaaatcggccaccgattttt 233  Q
    |||||||   |||||||||||| ||| ||||||||||| |||||||||| ||||||| ||||||||||||||   | |||| | |||  |||| ||||||    
T  22828980 aaactgg---aacaaatctaggcccg-aaaatacgtttctgttttatttcctgctgttaaaatcggccaccgaattgcacc-attcgaacaccaattttt 22829074  T
Q  234 gtggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
     | |||||||||||||||||| |||   | |||||||||||| ||||||| |||||||||||| |||||| |||||||||||| |||||||||||||    
T  22829075 ctcgaaccaacagacaaaaaaccagcacttaaaatcggccactgattttctacttccagaattccaatttcttcaattttgagtcactttcacaaca 22829171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 27 - 207
Target Start/End: Original strand, 39146226 - 39146402
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||| || |||||| |||||||| ||  ||||  ||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  39146226 acaaaccctagttttgttgttgtctatctaaacccttgtttcagccccctccatctcaaggtttacactgatacagtgtctatatttatagtaaaagaat 39146325  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgt 207  Q
    ||||||||||| |||   |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  39146326 cctcaataaaattgg---aacaaatctaggtctg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgt 39146402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 195
Target Start/End: Complemental strand, 21678116 - 21677952
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||| ||||||||||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  21678116 acaaaccctagttttgatgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatatctatatttatagtaaaagaat 21678017  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaa 195  Q
    ||||||||||||||    |||||||||| | ||| ||||||  ||| ||||||||||||||||||||||    
T  21678016 cctcaataaaactg---aaacaaatctaagcccg-aaaatatttttttgttttattttctgctgtcaaa 21677952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 333
Target Start/End: Original strand, 27832880 - 27833196
Alignment:
Q  35 tagttttgttgttgcctttctaaatccttgttttagtacc-ctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaat 133  Q
    ||||| ||||||||||||| |||| |||||||| ||  || || |||| | |||||| | ||||||||  | |||||||||||||||||||||| |||||    
T  27832880 tagttctgttgttgcctttttaaacccttgtttcagctccactctatcacaaggtttgctctgatacacaacctatatttatagtaaaagaatcatcaat 27832979  T
Q  134 aaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgattttt 233  Q
    ||||||||   |||||||||||| ||| ||||||| ||| |||||||||||||||||||||||| ||||||||  |||   | |||||||||||||||||    
T  27832980 aaaactgg---aacaaatctaggcccg-aaaatacatttctgttttattttctgctgtcaaaattggccaccgaactccatatatcggccaccgattttt 27833075  T
Q  234 gtggaaccaacagacaaaaaatcagagt---------------------tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattt 312  Q
       |||||||||||||||||| ||||||                     ||||||||||||||||||||||  |||||||||||  ||||| ||||||||    
T  27833076 tccgaaccaacagacaaaaaaccagagtgcaaaatcagccaccaaaccctgaaaatcggccaccgattttctgcttccagaattctaatttcttcaattt 27833175  T
Q  313 tgaggcactttcacaacaaaa 333  Q
    |||||||||||||||||||||    
T  27833176 tgaggcactttcacaacaaaa 27833196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 24748644 - 24748470
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||| |||||| ||||||||| |||||||| ||  |||| ||  || | ||||||||||||||||| |||||||||||| |||||||||    
T  24748644 acaaaccctagttttattgttgtctttctaaacccttgtttcagccccctctaagtcaaagtttacactgatacaatgtctatatttataataaaagaat 24748545  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    | ||||||||||||||||||   ||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  24748544 c-tcaataaaactggaacaa---atctagggccgaaaa-tacgtttctgttttattttctgctgtcaaaattggccaccg 24748470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 25276191 - 25276044
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||||  |||||||||  |||| |||||| | |||| | |||||||||    ||||||||||||||||||||    
T  25276191 acaaaccctagttttgttgttgcctttctaaattattgttttagccccctctatctcaaagtttgctctgatacaaagcatatatttatagtaaaagaat 25276092  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttt 178  Q
    ||||||||||||||||   ||||||||||| ||| |||||||||||||||||    
T  25276091 cctcaataaaactgga---acaaatctaggcccg-aaaatacgtttatgttt 25276044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 11355308 - 11355207
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||   |||||||||||||||||||||    
T  11355308 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaagcctatatttatagtaaaagaat 11355209  T
Q  127 cc 128  Q
    ||    
T  11355208 cc 11355207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 20137348 - 20137449
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||||||||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||   | |||||||||||||||||||    
T  20137348 acaaactctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagccaatatttatagtaaaagaat 20137447  T
Q  127 cc 128  Q
    ||    
T  20137448 cc 20137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 37412367 - 37412462
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||||||||||||||||||| ||||| |||  ||||||||||||||||||    
T  37412367 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctatatctccaggtttactctgattcaaggtctatatttatagtaaaa 37412462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 18567663 - 18567567
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  || | |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  18567663 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaag 18567567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 21677864 - 21677796
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||||||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||||||||    
T  21677864 tgaaaatcggccaccgattttcagcttccaggattccaatttcttcaattttgaggcactttcacaaca 21677796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 31435286 - 31435382
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  || | |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  31435286 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaag 31435382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 4296174 - 4296276
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatac-aatatctatatttatagtaaaagaa 125  Q
    |||||| ||||||||||||||| | ||||||| |||||||| ||  |||| |||||| |||||||||||||||| ||| ||||||||||||||||||| |    
T  4296174 acaaaccctagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaatgtctatatttatagtaaaagca 4296273  T
Q  126 tcc 128  Q
    |||    
T  4296274 tcc 4296276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 20091826 - 20091954
Alignment:
Q  73 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgttt 172  Q
    |||| |||||| |||||||| |||||| ||  ||||||||||||||||||| ||||   |||||| ||||||||   ||||||| | ||||| |||||||    
T  20091826 ccctctatctcaaggtttactctgataaaaagtctatatttatagtaaaagtatccctcataaaattggaacaa---atctaggcctgaaaa-tacgttt 20091921  T
Q  173 atgttttattttctgctgtcaaaatcggccacc 205  Q
     |||||||||| |||||||||||||||||||||    
T  20091922 ctgttttatttcctgctgtcaaaatcggccacc 20091954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 27306470 - 27306564
Alignment:
Q  29 aaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  27306470 aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 27306564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 44614 - 44518
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  44614 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 44518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 443645 - 443549
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| | |||||||||  |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  443645 acaaaccctagttttgttgttgccattctaaaccattgttttagctccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaag 443549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 24748414 - 24748346
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    |||||||| |||||||||||||| |||||||||||  |||||||||||||||||| |||||||||||||    
T  24748414 tgaaaatcagccaccgattttcagcttccagaattctaattttttcaattttgagtcactttcacaaca 24748346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 1049534 - 1049630
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | || ||||||  |||||||||||||||||||    
T  1049534 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaag 1049630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 31156150 - 31156246
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  31156150 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgccttgatacaagctctatatttatagtaaaag 31156246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 200
Target Start/End: Complemental strand, 7188592 - 7188424
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||| |||| |||||| ||| ||||| |||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||    
T  7188592 acaaaccctatttttattgttgactt-ctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtat 7188494  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcgg 200  Q
    ||   |||||| |||   |||||||||  | || ||||||||||||||||| |||||||| ||| |||| ||||    
T  7188493 ccctcataaaattgg---aacaaatctcag-cccaaaaatacgtttatgttatattttctcctgacaaattcgg 7188424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21990237 - 21990106
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta-----------gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtt 89  Q
    |||||||||||||||||||||||| |||||||||||           |||||||||||| | ||||||| |||||||| ||  |||| ||||||||||||    
T  21990237 caaaccctagtgtttgttccaaagagacaaactctatacaaatcatagttttgttgttgtcattctaaacccttgtttcagc-ccctctatctccaggtt 21990139  T
Q  90 tacactgatacaatatctatatttatagtaaaa 122  Q
    ||| ||||| |||  ||||||||||||||||||    
T  21990138 tactctgattcaaggtctatatttatagtaaaa 21990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 24258513 - 24258423
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatag 117  Q
    |||||| ||| ||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| ||||||||| | ||||||||||||    
T  24258513 acaaaccctaattttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttactctgatacaaaacctatatttatag 24258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 35679 - 35583
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| |||||| || |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  35679 acaaaccctagttttgttgttgtctttctgaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 35583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 13099715 - 13099811
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| |   |||| |||||| ||||||||  |||| |||  |||||||||||||||||||    
T  13099715 acaaaccctagttttgttgttgccattctaaacccttgtttcaaccccctctatctcaaggtttactttgattcaaggtctatatttatagtaaaag 13099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 22251781 - 22251877
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||   ||| |||||| | |||||| ||||| |||  | |||||||||||||||||    
T  22251781 acaaactctagttttgttgttgcctttctaaactcttgtttcagcctcctctatctcaaagtttactctgattcaaggtttatatttatagtaaaag 22251877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 40836981 - 40837077
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||| ||| ||  ||||  |||||||  ||| | |||||||||  |||||||||||||||||||    
T  40836981 acaaaccctagttttgttgttgcctttctaaacccttctttcagccccctcaatctccaaatttgctctgatacaaggtctatatttatagtaaaag 40837077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 21679822 - 21679759
Alignment:
Q  265 aaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaa 328  Q
    ||||||||||||||| |||| ||||||||||| |||||| || | |||||||||||||||||||    
T  21679822 aaatcggccaccgatgttcagcttccagaattccaatttcttaatttttgaggcactttcacaa 21679759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 25542580 - 25542485
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||| |||||||||| | |||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  25542580 acaaaccctagttttgttgttacctttctaaacctttgtttcag-cccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 25542485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 39146456 - 39146524
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||| |||||| |||||  |||||| |||| |||||| |||||||||||| |||||||||||||    
T  39146456 tgaaaatcgaccaccggttttctgcttccaaaattccaatttcttcaattttgagtcactttcacaaca 39146524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 42331246 - 42331334
Alignment:
Q  35 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||||||| | ||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  42331246 tagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaag 42331334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 26804619 - 26804527
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| |    ||||  |||||||||||||||||||    
T  26804619 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactc----acaaggtctatatttatagtaaaag 26804527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 38394036 - 38393936
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| ||    |||| | |||||  |||||||||  ||||||||||||||||||    
T  38394036 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 38393937  T
Q  123 g 123  Q
    |    
T  38393936 g 38393936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 42223207 - 42223108
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtac-cctatatctccaggtttacactgatacaatatctatatttatagtaaaagaa 125  Q
    |||||| ||||||||||||||||| ||||||| |||||||| |   | | | |||||| |||||||| |||||||||   ||||||||||||||||||||    
T  42223207 acaaaccctagttttgttgttgccattctaaacccttgtttcatcccacatctatctcaaggtttactctgatacaaagcctatatttatagtaaaagaa 42223108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 3035769 - 3035671
Alignment:
Q  29 aaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||| ||||||||||||||||||||||||| |||||||| ||  |||| ||    |||| | |||||  |||||||||  |||||||||||||||||||    
T  3035769 aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaag 3035671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 7470261 - 7470359
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactgatacaatatctatatttatagtaaa 121  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| ||    |||| | |||||  |||||||||  |||||||||||||||||    
T  7470261 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7470359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 18345591 - 18345551
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  18345591 acaaaccctagttttgttgttgcctttctaaacccttgttt 18345551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 20626088 - 20626048
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  20626088 acaaaccctagttttgttgttgcctttctaaacccttgttt 20626048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 20629979 - 20629939
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  20629979 acaaaccctagttttgttgttgcctttctaaacccttgttt 20629939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 20642398 - 20642358
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  20642398 acaaaccctagttttgttgttgcctttctaaacccttgttt 20642358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 28485616 - 28485576
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  28485616 acaaaccctagttttgttgttgcctttctaaacccttgttt 28485576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 28487603 - 28487563
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  28487603 acaaactctagttttgttgttacctttctaaacccttgttt 28487563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 38396366 - 38396326
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  38396366 acaaaccctagttttgttgttgcctttctaaacccttgttt 38396326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 40946378 - 40946338
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  40946378 acaaaccctagttttgttgttgcctttctaaacccttgttt 40946338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 48457703 - 48457663
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  48457703 acaaaccctagttttgttgttgcctttctaaacccttgttt 48457663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21592345 - 21592458
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctag-----------ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtt 89  Q
    |||||||||||||||||||||||| |||||||||||            |||||||||||| |||||||| | |||||| ||  |||| |||||| | |||    
T  21592345 caaaccctagtgtttgttccaaagagacaaactctatacaaatcctacttttgttgttgcatttctaaacctttgtttcagccccctctatctcaaagtt 21592444  T
Q  90 tacactgatacaat 103  Q
    ||||||||||||||    
T  21592445 tacactgatacaat 21592458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 48457740 - 48457705
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  48457740 caaaccctagtgtttgttccaaagagacaaactcta 48457705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 3677284 - 3677235
Alignment:
Q  73 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||| |||||||| |||||| ||||| ||| |||||||||||||||||||    
T  3677284 ccctctatctccaagtttactctgattcaagatctatatttatagtaaaa 3677235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 7351898 - 7351931
Alignment:
Q  34 ctagttttgttgttgcctttctaaatccttgttt 67  Q
    ||||||||||||||||||||||||| ||||||||    
T  7351898 ctagttttgttgttgcctttctaaacccttgttt 7351931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 7472219 - 7472317
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactgatacaatatctatatttatagtaaa 121  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||  |||| ||    |||| | |||||  |||||||||  |||||||||||||||||    
T  7472219 acaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 1850031 - 1849991
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||| |||||||||||||||| ||||||||    
T  1850031 acaaaccctagtttttttgttgcctttctaaacccttgttt 1849991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 3878627 - 3878587
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||| ||||||||| ||||||||    
T  3878627 acaaaccctagttttgttgttgtctttctaaacccttgttt 3878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 7349512 - 7349552
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| || |||||    
T  7349512 acaaaccctagttttgttgttgcctttctaaacccctgttt 7349552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 22392495 - 22392427
Alignment:
Q  55 taaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22392427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 27 - 334
Target Start/End: Original strand, 33541627 - 33541930
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  33541627 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttacactgatacaatgtctatatttatagtaaaagaat 33541726  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    ||||||||||||| ||||||   ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  33541727 cctcaataaaactcgaacaa---atctaggcccgaaaa-tacgtttctgttttattttctgctgtcaaaatcggccatcgtgctcaccaaatcagccacc 33541822  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcac 326  Q
    ||||||||  |||||||||||||||||| || |||  ||||||||||||||||||||| ||||||||||| |||||| || |||||||||||||||||||    
T  33541823 gatttttgccgaaccaacagacaaaaaaacaaagtccaaaatcggccaccgattttcagcttccagaattccaatttctttaattttgaggcactttcac 33541922  T
Q  327 aacaaaat 334  Q
    ||||||||    
T  33541923 aacaaaat 33541930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 27 - 276
Target Start/End: Original strand, 27107136 - 27107380
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  27107136 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttatactgatacaatgtctatatttatagtaaaagaat 27107235  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   |||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||| ||    | ||||||||||||||    
T  27107236 cctcaataaaactgg---aacaaatctaggcccg-aaaatacgtttctattttattttctgctgtcaaaatcggccatcgaatgctccaaatcggccacc 27107331  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccacc 276  Q
    ||||||||  ||||||| || | | ||| ||||||  |||||||||||||    
T  27107332 gatttttgccgaaccaa-aggccataaaacagagtccaaaatcggccacc 27107380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 14477372 - 14477197
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| |   |||| |||||| |||||| | |||||||||   |||||||||||||||||||||    
T  14477372 acaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagaat 14477273  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    |||||||||||||||   || ||||||||  ||| ||||||||||| | ||||||||  |||||||||||||||||||||    
T  14477272 cctcaataaaactgg---aataaatctagacccg-aaaatacgtttctattttatttcttgctgtcaaaatcggccaccg 14477197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 18813015 - 18812893
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatac 100  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| ||   ||| |||||||| |||| | |||||||    
T  18813015 caaaccctagtgtttgttccgaagagacaaactctagttttgttgttgcctttctaaacccttgtttcagcctcctctatctccaagtttgctctgatac 18812916  T
Q  101 aatatctatatttatagtaaaag 123  Q
    || ||||||||||||||||||||    
T  18812915 aagatctatatttatagtaaaag 18812893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 35 - 206
Target Start/End: Original strand, 15185957 - 15186124
Alignment:
Q  35 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 134  Q
    |||||||||| ||  ||||||||| |||||||| |||  ||| |||||| |||||||| |||||||||  | ||||||||||||||||| ||||   |||    
T  15185957 tagttttgttattttctttctaaacccttgtttcagtcacctttatctcaaggtttactctgatacaaagtttatatttatagtaaaagtatccctcata 15186056  T
Q  135 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    ||| |||   |||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  15186057 aaattgg---aacaaatctaggcccg-aaaatacgtttctgttttatttcctgctgtcaaaatcggccaccg 15186124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 14419430 - 14419526
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||| |||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  14419430 acaaaccctagtttttttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 14419526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 5372419 - 5372528
Alignment:
Q  29 aaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    |||| ||| ||||||||||||||||||||| |||||||| ||  |||| |||||| || |||||||||||||||| |||||| |||||||||||||||||    
T  5372419 aaaccctaattttgttgttgcctttctaaacccttgtttcagc-ccctctatctcaagatttacactgatacaatgtctataattatagtaaaagaatcc 5372517  T
Q  129 tcaataaaact 139  Q
    |||||| ||||    
T  5372518 tcaatagaact 5372528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 25952606 - 25952450
Alignment:
Q  38 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaa 137  Q
    |||| |||||||||||||||| |||||||| ||  |||| |||||| |||||| | |||||||||    |||||||||||||||||||||||||||||||    
T  25952606 ttttattgttgcctttctaaacccttgtttcagccccctctatctcaaggtttcctctgatacaaagcttatatttatagtaaaagaatcctcaataaaa 25952507  T
Q  138 ctggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatc 198  Q
    |||||   ||||||||| | ||| ||||||||||| |  ||||||| ||| ||||||||||    
T  25952506 ctgga---acaaatctaagcccg-aaaatacgtttcttgtttatttcctgttgtcaaaatc 25952450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 1225262 - 1225166
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| ||||||||| |||||||| ||  |||| |||||| |||||||||||||||||||  ||||||||||||||||||    
T  1225262 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagtaaaag 1225166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 5622977 - 5623077
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||  ||||||||| | |||||||||||||||||||||    
T  5622977 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttattctgatacaaaacctatatttatagtaaaagaat 5623076  T
Q  127 c 127  Q
    |    
T  5623077 c 5623077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 18810804 - 18810708
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | ||||||||| ||||||||||||||||||||    
T  18810804 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaagatctatatttatagtaaaag 18810708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 26775297 - 26775123
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag-aa 125  Q
    |||||| ||||| ||||||||||||||||||| |||||||| ||  |||| |||||| |||||| | |||||||||   |||||||||||||||||| ||    
T  26775297 acaaaccctagtattgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagtaa 26775198  T
Q  126 tcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
     |||| |||||| ||    ||||||| ||| ||  |||||||||||| |||| ||||| ||||||||||||||||||||||    
T  26775197 ccctc-ataaaattg---taacaaatatagctc--aaaaatacgtttctgttctatttcctgctgtcaaaatcggccaccg 26775123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 35872632 - 35872718
Alignment:
Q  42 gttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    ||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  35872632 gttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 35872718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 13858723 - 13858824
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| |   |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||    
T  13858723 acaaaccctagttttgttgttgcctttctaaacccttgtttcatccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtat 13858822  T
Q  127 cc 128  Q
    ||    
T  13858823 cc 13858824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 30480742 - 30480843
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    ||||||| |||||||||||||||||||||||| |||||||| |   || | |||||| ||||||||||| ||||||| ||||||||||||||||||| ||    
T  30480742 acaaactttagttttgttgttgcctttctaaacccttgtttcaaccccttctatctcaaggtttacactaatacaatgtctatatttatagtaaaagcat 30480841  T
Q  127 cc 128  Q
    ||    
T  30480842 cc 30480843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 36865634 - 36865538
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttaca-ctgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||  ||||||||| |||||||||| ||||||||||||||||||    
T  36865634 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatcttaaggtttacatctgatacaatgtctatatttatagtaaaa 36865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 27107387 - 27107456
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 331  Q
    ||||||||||||| ||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||    
T  27107387 tgaaaatcggccatcgattttcagcttccagaattctaatttcttcaattttgaggcactttcacaacaa 27107456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 3886157 - 3886253
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  3886157 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaag 3886253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 4424114 - 4424018
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||||||||||||||||||||| ||  |||| |||||| | |||| | |||||||||  ||| |||||||||||||||    
T  4424114 acaaaccctagttttgttgttgcctttctaaatccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctgtatttatagtaaaag 4424018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 14807847 - 14807751
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  14807847 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 14807751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 26775046 - 26774978
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||||||||||||||||  || |||||||| |||||| ||||||||||||||||||||||||||    
T  26775046 tgaaaatcggccaccgattttctgctaccagaattccaatttcttcaattttgaggcactttcacaaca 26774978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 27827082 - 27826986
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   ||||||||||||||||||    
T  27827082 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 27826986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 27829393 - 27829297
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   ||||||||||||||||||    
T  27829393 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 27829297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 27911110 - 27910992
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||| || |||||||| ||||||| ||    
T  27911110 acaaaccctagttttgttgttgcc-ttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagtat 27911012  T
Q  127 cctcaataaaactggaacaa 146  Q
    |  | |||||| ||||||||    
T  27911011 ctcccataaaattggaacaa 27910992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 27957529 - 27957411
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||| || |||||||| ||||||| ||    
T  27957529 acaaaccctagttttgttgttgcc-ttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagtat 27957431  T
Q  127 cctcaataaaactggaacaa 146  Q
    |  | |||||| ||||||||    
T  27957430 ctcccataaaattggaacaa 27957411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 15072842 - 15072710
Alignment:
Q  2 aaaccctagtgtttgttccaaagggacaaactcta-----------gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggttt 90  Q
    ||||||||||||||||||||||| |||||||||||           |||||||||||||||||||||| |||||||| ||  |||| |||||| | ||||    
T  15072842 aaaccctagtgtttgttccaaagagacaaactctatacaaaccatagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagttt 15072743  T
Q  91 acactgatacaatatctatatttatagtaaaag 123  Q
    |  |||||||||  |||||||||||||||||||    
T  15072742 agtctgatacaaggtctatatttatagtaaaag 15072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 146
Target Start/End: Complemental strand, 21482394 - 21482301
Alignment:
Q  51 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 146  Q
    |||||||| |||||||| ||| | || |||||| | |||||| |||||||||  |||||||||||||||||||||||||  | |||||||||||||    
T  21482394 tttctaaacccttgtttcagtccactctatctcaaagtttactctgatacaaattctatatttatagtaaaagaatcct--aaaaaactggaacaa 21482301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 41382769 - 41382673
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||| ||||||||||| | ||||||| |||||||||||  || | |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  41382769 acaaaccctaattttgttgttgtcattctaaacccttgttttagccccatctatctcaaggtttactctgattcaaggtctatatttatagtaaaag 41382673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 28251806 - 28251902
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| |   | || |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  28251806 acaaaccctagttttgttgttgccattctaaacccttgtttcaacccactctatctcaaagtttactatgatacaaggtctatatttatagtaaaag 28251902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 44720931 - 44720843
Alignment:
Q  35 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||| ||  |||||||||||||||||||    
T  44720931 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctttgatataaggtctatatttatagtaaaag 44720843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 181632 - 181537
Alignment:
Q  28 caaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||| |||||||| |||||||| ||||||  |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  181632 caaaccctagttttattgttgccattctaagcccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaag 181537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 15068114 - 15067981
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta-----------gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtt 89  Q
    |||||||||||||||||||||||| |||||||||||           |||||||||||||||||||||| |||||||| ||  || | |||||| | |||    
T  15068114 caaaccctagtgtttgttccaaagagacaaactctatacaaaccctggttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtt 15068015  T
Q  90 tacactgatacaatatctatatttatagtaaaag 123  Q
    ||   ||||||||  | |||||||||||||||||    
T  15068014 taggttgatacaaggtttatatttatagtaaaag 15067981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 15809315 - 15809215
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| ||    |||| | |||||  |||||||||  ||||||||||||||||||    
T  15809315 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 15809216  T
Q  123 g 123  Q
    |    
T  15809215 g 15809215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 32339405 - 32339305
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| ||    |||| | |||||  |||||||||  ||||||||||||||||||    
T  32339405 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 32339306  T
Q  123 g 123  Q
    |    
T  32339305 g 32339305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 37214458 - 37214517
Alignment:
Q  36 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacact 95  Q
    ||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||||||    
T  37214458 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacact 37214517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 2468361 - 2468433
Alignment:
Q  51 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||||||||||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  2468361 tttctaaatccttgtttcagctccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaag 2468433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 12517263 - 12517303
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  12517263 acaaaccctagttttgttgttgcctttctaaacccttgttt 12517303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 24873420 - 24873460
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  24873420 acaaaccctagttttgttgttgcctttctaaacccttgttt 24873460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 608867 - 608832
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  608867 caaaccctagtgtttgttccaaagagacaaactcta 608832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 3874143 - 3874108
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  3874143 caaaccctagtgtttgttccaaagagacaaactcta 3874108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 30480705 - 30480740
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  30480705 caaaccctagtgtttgttccaaagagacaaactcta 30480740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 33541590 - 33541625
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  33541590 caaaccctagtgtttgttccaaagagacaaactcta 33541625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 37214393 - 37214428
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  37214393 caaaccctagtgtttgttccaaagagacaaactcta 37214428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 14419787 - 14419832
Alignment:
Q  78 tatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||| |||||||||| ||||||||||||| |||||    
T  14419787 tatctcaaggtttaccctgatacaatgtctatatttatagcaaaag 14419832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 3874106 - 3874066
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    ||||||| |||||||||||||| ||||||||| ||||||||    
T  3874106 acaaactttagttttgttgttgtctttctaaacccttgttt 3874066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 15186179 - 15186247
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||| | |||||||||   |||||| |||| | |||| |||||||||||| |||||||||||||    
T  15186179 tgaaaatcgacgaccgattttttgcttccataattcctatttcttcaattttgagtcactttcacaaca 15186247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 22684895 - 22684935
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||| ||||||||| ||||||||    
T  22684895 acaaaccctagttttgttgttgtctttctaaacccttgttt 22684935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 28283458 - 28283498
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  28283458 acaaaccctagttttgttgttgccattctaaacccttgttt 28283498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 43079698 - 43079658
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||| |||||||| ||||||||    
T  43079698 acaaaccctagttttgttgttgcttttctaaacccttgttt 43079658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 3e-95; HSPs: 97)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 28137506 - 28137832
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatac 100  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||    
T  28137506 caaaccctagtgtttgttcccaagagacaaactctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatac 28137605  T
Q  101 aatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcgg 200  Q
    ||    ||||||||||||||||||||||||||||||||||||||||   ||||||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  28137606 aacgcatatatttatagtaaaagaatcctcaataaaactggaacaa---atctaggcccgaaaa-tacgtttctgttttattttctgctgtcaaaatcgg 28137701  T
Q  201 ccaccgtgctcaccaaatcggccaccgatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaa 300  Q
    ||||||    | ||||||||| | | ||||||||  ||||||| | |||||||| ||||||  |||||||||||||||||||| |||||||||||| |||    
T  28137702 ccaccgaatgctccaaatcggtcgctgatttttgccgaaccaataaacaaaaaaccagagtgcaaaatcggccaccgattttctacttccagaattccaa 28137801  T
Q  301 ttttttcaattttgaggcactttcacaacaa 331  Q
    ||| |||||||||||||||||||||||||||    
T  28137802 tttcttcaattttgaggcactttcacaacaa 28137832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 27 - 277
Target Start/End: Original strand, 43421652 - 43421897
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| |   || | |||||| ||||||||||||||||||| |||||||||||||||||| | |    
T  43421652 acaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccttctatctcaaggtttacactgatacaatgtctatatttatagtaaaaaagt 43421751  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    ||||||||||||||||||||   ||||||| || |||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  43421752 cctcaataaaactggaacaa---atctaggccc-aaaaatacgttc-tattttattttctgctgtcaaaatcggccaccgcgctcaccaaatcggccact 43421846  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 277  Q
    ||||||||  |||||||||||||||||| ||||||  ||||||||||||||    
T  43421847 gatttttgccgaaccaacagacaaaaaaacagagtccaaaatcggccaccg 43421897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 1626920 - 1627123
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  1626920 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaat 1627019  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    | |||||||||||||   ||||||||||||  || ||||||||||| ||||||||||| |||||||||| || |||||||    | ||||||||||||||    
T  1627020 catcaataaaactgg---aacaaatctaggctcg-aaaatacgtttctgttttattttttgctgtcaaagtctgccaccgaatgctccaaatcggccacc 1627115  T
Q  227 gatttttg 234  Q
    ||||||||    
T  1627116 gatttttg 1627123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 35 - 234
Target Start/End: Complemental strand, 36011839 - 36011644
Alignment:
Q  35 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaata 134  Q
    |||||| ||||||| |||||||||||||||||| ||  |||| |||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  36011839 tagtttcgttgttgtctttctaaatccttgtttcagccccctttatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaata 36011740  T
Q  135 aaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 234  Q
    ||||||||   ||||||||||| ||| ||||||||||| ||||||||||| || ||||||||||| |||||     | ||||||||||||||||||||||    
T  36011739 aaactgga---acaaatctaggcccg-aaaatacgtttctgttttattttatgttgtcaaaatcgaccacctaatgctccaaatcggccaccgatttttg 36011644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 27 - 331
Target Start/End: Original strand, 28100278 - 28100599
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||  |||| |||||| ||| |||| |||||||||    ||||||||||||||||||||    
T  28100278 acaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaagggttactctgatacaacgcttatatttatagtaaaagaat 28100377  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||| |||||||||||||||   ||| ||| ||||||| ||||||  ||||||||||||||||||||||||||||||||     | ||||||||||| ||    
T  28100378 cctctataaaactggaacaa---atccaggcccgaaaa-tacgttagtgttttattttctgctgtcaaaatcggccaccaaatgctccaaatcggccgcc 28100473  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagt---------------------tgaaaatcggccaccgattttcaacttccagaatttcaattttt 305  Q
    ||||||||  ||||||||  |||||||| ||||||                     ||||||||||||| |||||||| |||||||||||| |||||| |    
T  28100474 gatttttgccgaaccaacgaacaaaaaaccagagtgcaaaatcggccaccaatccctgaaaatcggccatcgattttctacttccagaattccaatttct 28100573  T
Q  306 tcaattttgaggcactttcacaacaa 331  Q
    ||||||||||||||||||||||||||    
T  28100574 tcaattttgaggcactttcacaacaa 28100599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 27 - 206
Target Start/End: Original strand, 43423700 - 43423877
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| | |||| ||||||||| ||||||||| |||||||||||||||||||| |    
T  43423700 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctttctcaaggtttacagtgatacaatgtctatatttatagtaaaagagt 43423799  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtc-aaaatcggccaccg 206  Q
    |||||||||||||||   |||||||||||| || |||||||||||| | ||||||||| ||||||| ||||||||||||||    
T  43423800 cctcaataaaactgg---aacaaatctaggcccaaaaaatacgtttctattttattttttgctgtcaaaaatcggccaccg 43423877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 53468656 - 53468867
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta----------gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggttt 90  Q
    ||||||||||||||| |||||||| |||||||||||          |||||||||||||| ||||||| |||||||| ||  |||| |||||  ||||||    
T  53468656 caaaccctagtgtttcttccaaagagacaaactctatacaaacctggttttgttgttgccattctaaacccttgtttcagccccctttatctaaaggttt 53468755  T
Q  91 acactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctg 190  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||   |||||||||||| ||| |||||| |||| |||||||||||||| ||    
T  53468756 acactgatacaatgtctatatttatagtaaaagaatcctcaataaaaatgg---aacaaatctaggcccg-aaaatatgtttctgttttattttctgttg 53468851  T
Q  191 tcaaaatcggccaccg 206  Q
    | ||||||||||||||    
T  53468852 ttaaaatcggccaccg 53468867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 27 - 229
Target Start/End: Original strand, 5927001 - 5927202
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||  | || |||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  5927001 acaaactctagttttgttgttgcatttctaaacccttgtttcagccctctctatctcaaggtttacaccgatacaatgtctatatttatagtaaaagaat 5927100  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattt---tctgctgtcaaaatcggccaccgtgctcaccaaatcggcc 223  Q
    | ||||||||  |||   |||||||||||| ||| |||||| |||| ||||||||||     ||||  ||||||||||||||||||||||||||||||||    
T  5927101 cttcaataaacttgg---aacaaatctagg-ccgtaaaatatgtttttgttttatttcaccgtgctcacaaaatcggccaccgtgctcaccaaatcggcc 5927196  T
Q  224 accgat 229  Q
    | ||||    
T  5927197 atcgat 5927202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 27 - 278
Target Start/End: Original strand, 28102239 - 28102486
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||| |||| || ||||||    ||||||||||||||||||||    
T  28102239 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaagggttactctaatacaacgcttatatttatagtaaaagaat 28102338  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||| ||||||||||   |||||||| ||| ||| ||||||||||  ||||||||||||||||||||||||||||||| |    | |||||||  |  ||    
T  28102339 cctctataaaactgg---aacaaatccaggcccg-aaaatacgttagtgttttattttctgctgtcaaaatcggccactgaatgctccaaatcaactgcc 28102434  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 278  Q
    |||||||   |||||||||||||||||| | ||||  |||||||||||||||    
T  28102435 gattttttccgaaccaacagacaaaaaacccgagtgcaaaatcggccaccga 28102486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 47701832 - 47701943
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  47701832 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaggtttacactgatacaatgtctatatttatagtaaaagaat 47701931  T
Q  127 cctcaataaaac 138  Q
    ||||||||||||    
T  47701932 cctcaataaaac 47701943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 28181042 - 28180889
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||| ||||||||| |  | ||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  28181042 acaaaccctagttttgttgttgtctttctaaacc--tatttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaat 28180945  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttct 186  Q
    ||||||||||||||||   ||||||| ||| ||| ||||||||||| | |||||||||||    
T  28180944 cctcaataaaactgga---acaaatcgaggcccg-aaaatacgtttctattttattttct 28180889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 51674966 - 51675087
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatac 100  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||| |||||||| ||  |||| |||||| | ||||||| ||||||    
T  51674966 caaaccctagtgtttgttccaaagggacaaaccttagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaacgtttacattgatac 51675065  T
Q  101 aatatctatatttatagtaaaa 122  Q
    ||  ||||||||||||||||||    
T  51675066 aacgtctatatttatagtaaaa 51675087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 5522826 - 5522948
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatac 100  Q
    ||||||| |||||||||||| ||| ||||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||    
T  5522826 caaacccgagtgtttgttccgaagagacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatac 5522925  T
Q  101 aatatctatatttatagtaaaag 123  Q
    ||  |||||||||||||||||||    
T  5522926 aaggtctatatttatagtaaaag 5522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 53591241 - 53591119
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatac 100  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||  ||||||| ||   ||| |||||| ||||||||||| ||||    
T  53591241 caaaccctagtgtttgttctaaagagacaaaccctagttttgttgttgtctttctaaactcttgtttcagcctcctctatctcaaggtttacacttatac 53591142  T
Q  101 aatatctatatttatagtaaaag 123  Q
    ||| |||||||||||||||||||    
T  53591141 aatgtctatatttatagtaaaag 53591119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 54884177 - 54884058
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    ||||| |||||||||||||||||||||||||| |||||||  ||  |||| |||||| ||||||||| |||| |||| | ||||||||| ||||||||||    
T  54884177 acaaattctagttttgttgttgcctttctaaacccttgttcgagctccctctatctcaaggtttacaatgatccaatgtttatatttatggtaaaagaat 54884078  T
Q  127 cctcaataaaactggaacaa 146  Q
    ||||||||||| ||||||||    
T  54884077 cctcaataaaattggaacaa 54884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 3314704 - 3314603
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||| |||||||||| |||| ||| ||  |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  3314704 acaaaccctagttttgttgttacctttctaaacccttatttcagccccctctatctcaaggtttacactgatacaatatctatatttatagtaaaagcat 3314605  T
Q  127 cc 128  Q
    ||    
T  3314604 cc 3314603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 254
Target Start/End: Complemental strand, 23633479 - 23633257
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||| |||||| ||| |||||||||||||||||  | || |||||| |||||||| |||||||||  ||||||||||||||||||| ||    
T  23633479 acaaaccctagttttcttgttggctt-ctaaatccttgttttagccctctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtat 23633381  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    ||   |||||| |||   ||||||||||||  || ||||||||||| |||| |||||||||||| |||| |||| | |||   ||  | | |||||||||    
T  23633380 ccctcataaaattgg---aacaaatctaggctcg-aaaatacgtttctgttatattttctgctggcaaattcggaccccgaattcctccattcggccacc 23633285  T
Q  227 gatttttgtggaaccaacagacaaaaaa 254  Q
    ||||||||  |||||||||||| |||||    
T  23633284 gatttttgccgaaccaacagacgaaaaa 23633257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 6231469 - 6231374
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| |||||||||||||||||||||||||||||||||| ||  | || |||||| || |||||||||||||||| ||||||||||||||||||    
T  6231469 acaaaccctagttttgttgttgcctttctaaatccttgtttcagcccgctctatctcaagatttacactgatacaatgtctatatttatagtaaaa 6231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 4663880 - 4663764
Alignment:
Q  86 ggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttc 185  Q
    ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||   | |||||||||| | ||  ||||||||||| ||||||||||||    
T  4663880 ggtttactctgatacaatgtctatatttatagtaaaagaatcttcaataaaact---agaacaaatctaag-cctgaaaatacgtttctgttttattttc 4663785  T
Q  186 tgctgtcaaaatcggccaccg 206  Q
    | |||| ||||||||||||||    
T  4663784 tactgtaaaaatcggccaccg 4663764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 880689 - 880790
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||| |||||||  ||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||    
T  880689 acaaaccctagttttgttgttgccattctaaactcttgtttcagacccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcat 880788  T
Q  127 cc 128  Q
    ||    
T  880789 cc 880790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 3306812 - 3306724
Alignment:
Q  34 ctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||||||||||||  |||||||| |||||||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  3306812 ctagttttgttgttgtatttctaaacccttgtttcagccccctatatctctaggtttacactgatacaatgtctatatttatagtaaaa 3306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 51943391 - 51943295
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| | |||||| || ||||| ||||||||||||||| ||||| |||  |||||||||||||||||||    
T  51943391 acaaaccctagttttgttgttgcctttctaaacctttgtttcagcaccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 51943295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32219141 - 32219026
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatac 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| || |||||||| ||  |||| |||||| | |||||  | |||||    
T  32219141 caaaccctagtgtttgttacaaagagacaaactctagttttgttgttgcctttctgaacccttgtttcagccccctctatctcaaagtttagtcagatac 32219042  T
Q  101 aatatctatatttata 116  Q
    ||  ||||||||||||    
T  32219041 aaggtctatatttata 32219026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 1627172 - 1627238
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaa 328  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  1627172 tgaaaatcggccaccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaa 1627238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 3859548 - 3859452
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  3859548 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 3859452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 15780880 - 15780784
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| |||||||| |||||| |||||||||  |||||||||||||||||||    
T  15780880 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctccaagtttactctgatacaaggtctatatttatagtaaaag 15780784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 6561830 - 6561740
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatag 117  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||  |||||||||||||    
T  6561830 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaggtctatatttatag 6561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 36011596 - 36011526
Alignment:
Q  261 ttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 331  Q
    |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||||||||||||||||||    
T  36011596 ttgaaaattggccaccgattttcaccttccagatttccaatttcttcaattttgaggcactttcacaacaa 36011526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 890024 - 890109
Alignment:
Q  43 ttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    |||||||| ||||||| |||||||| ||   ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  890024 ttgttgccattctaaacccttgtttcagcttcctctatctcaaggtttacactgatacaatatctatatttatagtaaaagcatcc 890109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 43226142 - 43226010
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta----------gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggttt 90  Q
    |||||||||||||||||||||| | |||||||||||          |||||||||||||||||||||| |||||||| ||  |||| |||||||| ||||    
T  43226142 caaaccctagtgtttgttccaacgagacaaactctatacaaacgtagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagttt 43226043  T
Q  91 acactgatacaatatctatatttatagtaaaag 123  Q
     | |||||||||| |||||||||||||| ||||    
T  43226042 gctctgatacaatgtctatatttatagtgaaag 43226010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 11170424 - 11170328
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  11170424 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 11170328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 26720568 - 26720472
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||| ||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  26720568 acaaaccctagttttgttgttgcctttctaaacccttatttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 26720472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 43228311 - 43228215
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||| |||||||||||||| ||||    
T  43228311 acaaacgctagttttgttgttgcctttctaaactcttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaag 43228215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 10956264 - 10956359
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| ||||| || |||||| |||||||||  ||||||||||||||||||    
T  10956264 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 10956359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 54691811 - 54691912
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||   |||| |||||  |||||||| |||||||||   |||||||||||||||||||||    
T  54691811 acaaaccctagttttgttgtcgcctttctaaaaccttgtttta-ccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagaat 54691909  T
Q  127 cct 129  Q
    |||    
T  54691910 cct 54691912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 5927256 - 5927325
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 331  Q
    |||||||| |||||||||||||| |||||| |||| |||||| ||||||||| |||||||||||||||||    
T  5927256 tgaaaatcagccaccgattttcagcttccaaaattccaatttcttcaattttaaggcactttcacaacaa 5927325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 254
Target Start/End: Complemental strand, 23637046 - 23636824
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||| |||||| ||| ||||| |||||||||||   ||| |||||| |||||||| |||||||||  | |||||||||| |||||  ||    
T  23637046 acaaaccctagttttcttgttggctt-ctaaacccttgttttagcctcctctatctcaaggtttactctgatacaaagtatatatttatattaaaattat 23636948  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    ||   |||||| ||    |||||||||||| |||||||||| |||| |||| ||||||||||||  ||| |||| | |||   ||  | | |||||||||    
T  23636947 ccctcataaaattg---aaacaaatctagg-ccgaaaaatatgtttctgttatattttctgctggaaaattcgggccccgaattcctccattcggccacc 23636852  T
Q  227 gatttttgtggaaccaacagacaaaaaa 254  Q
    ||||||||  ||||||||||||||||||    
T  23636851 gatttttgctgaaccaacagacaaaaaa 23636824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 28761665 - 28761766
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||| ||||||||| |||||||| |   |||| |||||| |||||||| ||||| |||  ||||||||||||||||||| ||    
T  28761665 acaaaccctagttttgttgttgtctttctaaacccttgtttcaaccccctctatctcaaggtttactctgatgcaaagtctatatttatagtaaaagtat 28761764  T
Q  127 cc 128  Q
    ||    
T  28761765 cc 28761766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 4308518 - 4308614
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  4308518 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 4308614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 5191673 - 5191577
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| |   |||||||  |||||||||||||||||||    
T  5191673 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgcttagatacaaggtctatatttatagtaaaag 5191577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 7754131 - 7754063
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||||||| ||||||| | ||||||||||| |||||| |||||||||||| |||||||||||||    
T  7754131 tgaaaatcggccagcgatttttagcttccagaattccaatttcttcaattttgagccactttcacaaca 7754063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 11163170 - 11163074
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  ||||||||||| |||||||    
T  11163170 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatcgtaaaag 11163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 22114542 - 22114638
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||| ||||||||||||| |||||||| ||  || | |||||||| |||| | |||||||||  |||||||||||||||||||    
T  22114542 acaaaccctagttttgtttttgcctttctaaacccttgtttcagccccttctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 22114638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 35777441 - 35777345
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||| |||||||||||||||||||    
T  35777441 acaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaag 35777345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 39715489 - 39715394
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||| |||||||| |||||| |||| ||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  39715489 acaaaccctagttttggtgttgcctctctaaacccttatttcagc-ccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaag 39715394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 45882959 - 45882863
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| ||||||   ||||||  ||||||||  |||||||||||||||||||    
T  45882959 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcatagtttactatgatacaaggtctatatttatagtaaaag 45882863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 10958560 - 10958655
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| |||||  | |||||| |||||||||  ||||||||||||||||||    
T  10958560 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctttatgtttactctgatacaaggtctatatttatagtaaaa 10958655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 43423937 - 43424000
Alignment:
Q  267 atcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||||| ||||| ||| |||||||| |||||| ||||||||||||||||||||||||||    
T  43423937 atcggccaccggttttctactaccagaattccaatttcttcaattttgaggcactttcacaaca 43424000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 18162683 - 18162588
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacac-tgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| |   |||| |||||||| |||||| | ||||||||  |||||||||||||||||||    
T  18162683 acaaaccctagttttgttgttgcctttctaaacccttgtttca--tccctctatctccaagtttactcatgatacaaggtctatatttatagtaaaag 18162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 18097137 - 18097234
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctc-caggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| |||||| || ||||||  ||||||||  |||||||||||||||||||    
T  18097137 acaaaccctagttttgttgttgccattctaaacccttgtttgagccccctctatctctcaagtttactatgatacaaggtctatatttatagtaaaag 18097234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 51727250 - 51727339
Alignment:
Q  34 ctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  51727250 ctagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 51727339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 1313429 - 1313334
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| || |||| |||||||| ||  |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  1313429 acaaaccctagttttgttgttgccattgtaaa-ccttgtttcagccccctctatctcaaggtttactctgattcaaggtctatatttatagtaaaag 1313334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 24979727 - 24979631
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| ||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  | |||||||||||| ||||    
T  24979727 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtatatatttatagtgaaag 24979631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 455927 - 455827
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| ||    |||| |||||||  |||||||||  ||||||||||||||||||    
T  455927 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaaaa 455828  T
Q  123 g 123  Q
    |    
T  455827 g 455827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 458304 - 458204
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| ||    |||| |||||||  |||||||||  ||||||||||||||||||    
T  458304 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaaaa 458205  T
Q  123 g 123  Q
    |    
T  458204 g 458204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 32264276 - 32264376
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccagg----tttacactgatacaatatctatatttatagtaaaa 122  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||  |||| |||||| | |    ||||| |||||||||  ||||||||||||||||||    
T  32264276 acaaactttagttttgttgttgcctttctaaacccttgtttgagccccctctatctcaaagttaatttactctgatacaaggtctatatttatagtaaaa 32264375  T
Q  123 g 123  Q
    |    
T  32264376 g 32264376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 6066033 - 6066130
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttag-taccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||   |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  6066033 acaaaccctagttttgttgttgcctttctaaacccttgtttcagcccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 6066130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 12268214 - 12268299
Alignment:
Q  38 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||||||||| |||||||||  ||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  12268214 ttttgttgttgtctttctaaactcttgtttcagctccctctatctcaaagtttactctgatacaagttctatatttatagtaaaag 12268299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 18099407 - 18099503
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctc-caggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| |||||| || |||||| |||||||||  |||||| ||||||||||||    
T  18099407 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctcaagtttactctgatacaaggtctata-ttatagtaaaag 18099503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 8183209 - 8183249
Alignment:
Q  290 cagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  8183209 cagaatttcaatttcttcaattttgaggcactttcacaaca 8183249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 35918186 - 35918282
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| |  ||| |  ||||||||  |||||||||||||| ||||    
T  35918186 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttgctatgatacaaggtctatatttatagtgaaag 35918282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 47149132 - 47149233
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctcc----aggtttaca-ctgatacaatatctatatttatagtaaa 121  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||    |||  |||| |||||||||  |||||||||||||||||    
T  47149132 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccctcaaggcctacatctgatacaaggtctatatttatagtaaa 47149231  T
Q  122 ag 123  Q
    ||    
T  47149232 ag 47149233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 48361908 - 48362003
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| | ||||||| |||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  48361908 acaaaccctagttttgttgttgtcattctaaa-ccttgtttcagccccctgtatctcaaagtttactatgatacaaggtctatatttatagtaaaag 48362003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 53915733 - 53915829
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| | | ||||| |||||||| ||  |||| |||||  |||||||| ||||| |||  |||||||||||||||||||    
T  53915733 acaaaccctagttttgttgttgtcatcctaaacccttgtttcagccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaag 53915829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 4104132 - 4104232
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| ||    |||| | |||||  |||||||||  ||||||||||||||||||    
T  4104132 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 4104231  T
Q  123 g 123  Q
    |    
T  4104232 g 4104232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 6063683 - 6063781
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  ||  |||| |||| | |||| |  ||||||||  |||||||||||||||||||    
T  6063683 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcaaagtttgctttgatacaaggtctatatttatagtaaaag 6063781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 31151368 - 31151266
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgtttt-agtaccctatatctccaggtttaca-ctgatacaatatctatatttatagtaaaaga 124  Q
    |||||| |||||||| ||||||  |||||||| ||||||||| ||  |||| |||||| ||||||||| |||||||||  |||||||||||||||||||     
T  31151368 acaaaccctagttttcttgttga-tttctaaacccttgttttcagccccctctatctcgaggtttacatctgatacaaagtctatatttatagtaaaagc 31151270  T
Q  125 atcc 128  Q
    ||||    
T  31151269 atcc 31151266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 28102490 - 28102563
Alignment:
Q  261 ttgaaaatcggccaccgattttcaacttccagaatttcaatttt-ttcaattttgaggcactttcacaacaaaa 333  Q
    ||||||||| ||| |||||||||  ||| ||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  28102490 ttgaaaatcagcccccgattttctgctttcagaattccaaatttattcaattttgaggcactttcacaagaaaa 28102563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 1321441 - 1321365
Alignment:
Q  47 tgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaag 1321365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 10621767 - 10621823
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctc 83  Q
    |||||| |||||||||||||||| |||||||| |||||||| || ||||| ||||||    
T  10621767 acaaaccctagttttgttgttgcttttctaaacccttgtttcagcaccctctatctc 10621823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 25533462 - 25533422
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  25533462 acaaaccctagttttgttgttgcctttctaaacccttgttt 25533422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 27101418 - 27101458
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  27101418 acaaaccctagttttgttgttgcctttctaaacccttgttt 27101458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 30005861 - 30005821
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  30005861 acaaaccctagttttgttgttgcctttctaaacccttgttt 30005821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 42990324 - 42990284
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  42990324 acaaaccctagttttgttgttgcctttctaaacccttgttt 42990284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 50494019 - 50493923
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||  |||| ||||||   |||| |  ||||||||  |||||||||||||| ||||    
T  50494019 acaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctcagtttgctttgatacaaggtctatatttatagtgaaag 50493923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 53597215 - 53597143
Alignment:
Q  73 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaaca 145  Q
    |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||   |||||| |||||||    
T  53597215 ccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatccctcataaaattggaaca 53597143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 53917901 - 53917997
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| | ||||||| | |||||| ||  ||||  ||||| |||||||  ||||| |||  |||||||||||||||||||    
T  53917901 acaaaccctagttttgttgttgtcattctaaaccattgtttcagccccctccatctcaaggtttaatctgattcaaggtctatatttatagtaaaag 53917997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 4308481 - 4308516
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  4308481 caaaccctagtgtttgttccaaagagacaaactcta 4308516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 6484372 - 6484309
Alignment:
Q  60 ccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||| ||  |||| |||||| |||||||||||||||||||  |||||||||||| |||||    
T  6484372 ccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagcaaaag 6484309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 10084589 - 10084624
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  10084589 caaaccctagtgtttgttccaaagagacaaactcta 10084624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 10191509 - 10191544
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  10191509 caaaccctagtgtttgttccaaagagacaaactcta 10191544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 18097100 - 18097135
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  18097100 caaaccctagtgtttgttccaaagagacaaactcta 18097135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 18099370 - 18099405
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  18099370 caaaccctagtgtttgttccaaagagacaaactcta 18099405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 27635864 - 27635959
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||  | ||||||| |||||||| ||  |||| |||||| |||||||| || || |||  ||||||||| ||||||||    
T  27635864 acaaaccctagttttgttgtttgcattctaaacccttgtttcagccccctctatctcaaggtttactctaattcaaggtctatatttgtagtaaaa 27635959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 30005898 - 30005863
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  30005898 caaaccctagtgtttgttccaaagagacaaactcta 30005863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 32264239 - 32264274
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  32264239 caaaccctagtgtttgttccaaagagacaaactcta 32264274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 43421933 - 43421972
Alignment:
Q  292 gaatttcaattttttcaattttgaggcactttcacaacaa 331  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  43421933 gaattccaatttcttcaattttgaggcactttcacaacaa 43421972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 562129 - 562195
Alignment:
Q  162 aaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccga 228  Q
    ||||||||||| |||||||||| ||||| ||||| |||||||||| |||  |||| | |||||||||    
T  562129 aaaatacgtttctgttttatttcctgctctcaaattcggccaccgagctatccaattgggccaccga 562195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 4560501 - 4560603
Alignment:
Q  26 gacaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaa 125  Q
    |||||||||||||||||||||| ||||| |||| | |||||| ||  |||| |||||| | ||||||  |||||||   |||||| ||||||| |||| |    
T  4560501 gacaaactctagttttgttgttacctttataaaccattgtttcagccccctctatctcaatgtttactatgatacatagtctatacttatagtgaaagta 4560600  T
Q  126 tcc 128  Q
    |||    
T  4560601 tcc 4560603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 277
Target Start/End: Original strand, 43423865 - 43423926
Alignment:
Q  215 aaatcggccaccgatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 277  Q
    ||||||||||||||||||||  |||| |||| |||||||| ||||||  ||||||||||||||    
T  43423865 aaatcggccaccgatttttgccgaactaacaaacaaaaaa-cagagtccaaaatcggccaccg 43423926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 746777 - 746737
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||| |||||||| ||||||||    
T  746777 acaaaccctagttttgttgttgcttttctaaacccttgttt 746737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 1673927 - 1673826
Alignment:
Q  95 tgatacaatatctatatttatagtaaaagaat-cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtca 193  Q
    ||||||||  ||||||||||||||||||| || |||||| ||||||   | |||||||||| | ||| ||||||| ||| |||||||||||||| || ||    
T  1673927 tgatacaagttctatatttatagtaaaagtatccctcaa-aaaact---agaacaaatctaagcccg-aaaatacatttctgttttattttctggtggca 1673833  T
Q  194 aaatcgg 200  Q
    |||||||    
T  1673832 aaatcgg 1673826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 13420456 - 13420528
Alignment:
Q  74 cctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 146  Q
    |||||||||| |||||| |  |||||||| | |||||||||||||||||| |||||  |||||| || |||||    
T  13420456 cctatatctcaaggtttgctttgatacaaaacctatatttatagtaaaagtatccttcataaaattgaaacaa 13420528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 25388926 - 25388886
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||| |||||||| ||||||||    
T  25388926 acaaaccctagttttgttgttgcttttctaaacccttgttt 25388886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 38210390 - 38210350
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||| |||||||| ||||||||    
T  38210390 acaaaccctagttttgttgttgcttttctaaacccttgttt 38210350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 38890060 - 38890020
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||| ||||||||||||||||||||| ||||||||    
T  38890060 acaaaccctaattttgttgttgcctttctaaacccttgttt 38890020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 42992306 - 42992266
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||||||| |||| ||||||||    
T  42992306 acaaaccctagttttgttgttgcctttttaaacccttgttt 42992266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 9e-77; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 27 - 330
Target Start/End: Original strand, 22163186 - 22163485
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||  |||| |||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  22163186 acaaaccctagtgttgttgttgcctttctaaatccttgtttcagccccctctatctcaaagtttacactgatacaatgtctatatttatagtaaaagaat 22163285  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   |||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||| ||||| |||||| |||||||||||||||    
T  22163286 cctcaataaaactgg---aacaaatctaggcccg-aaaatacatttctgttttatttcctgctgtcaaaattggccatcgtgcttaccaaatcggccacc 22163381  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcac 326  Q
    |||   ||| ||||||  ||   ||| |  | || | ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  22163382 gataaatgtcgaaccagaagctcaaataaaacaggtcaaaatcggccaccgattttcagcttccagaattccaatttcttcaattttgaggcactttcac 22163481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 27 - 330
Target Start/End: Original strand, 11739799 - 11740078
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||| ||||||||||| ||||||||| |||||||  ||  |||| |||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  11739799 acaaaccctaattttgttgttgtctttctaaacccttgttccagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaat 11739898  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   |||||||||||   || ||||||||||| ||||||||||||||||||||||||||||||                     ||    
T  11739899 cctcaataaaactgg---aacaaatctagacacg-aaaatacgtttctgttttattttctgctgtcaaaatcggcca---------------------cc 11739973  T
Q  227 gatttttgtggaaccaacagac-aaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttca 325  Q
    ||||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  11739974 gatttttgccgaaccaacagacaaaaaaaacagagttgaaaatcggccaccgattttcaactttcagaattccaatttcttcaattttgaggcactttca 11740073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 27 - 278
Target Start/End: Original strand, 15539714 - 15539962
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||| ||||||||||| | ||||||| |||||||| |   ||||||||||| ||||||||||||||||||| |||||||||||||||||| |||    
T  15539714 acaaaccctaattttgttgttgtcattctaaacccttgtttcaaccccctatatctcaaggtttacactgatacaatgtctatatttatagtaaaacaat 15539813  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||  |||   |||| |||||||    
T  15539814 cctcaataaaactgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgaactccataaatgggccacc 15539909  T
Q  227 gatttttgtggaaccaacagac-aaaaaatcagagttgaaaatcggccaccga 278  Q
     |||||| | |||||||| ||| |||||||||||||  |||||||||||||||    
T  15539910 aatttttttcgaaccaactgacaaaaaaatcagagtgcaaaatcggccaccga 15539962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 38020157 - 38019986
Alignment:
Q  29 aaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    |||| ||||||||||||||||||||||||| |||||||  |   |||| ||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  38020157 aaaccctagttttgttgttgcctttctaaacccttgttccaaccccctctatctccaggtttacaccgatacaatgtctatatttatagtaaaaaaatcc 38020058  T
Q  129 tcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccac 204  Q
    |||||||||||||   || ||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  38020057 tcaataaaactgg---aataaatctaggcccg-aaaatacgtttctgttttattttctactgtcaaaatcggccac 38019986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 27 - 204
Target Start/End: Complemental strand, 3022179 - 3022006
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||   |||||||||| |||||||| |||||||||  |||||||||||||||| |||||    
T  3022179 acaaactctagttttgttgttgcctttataaacccttgtttcagcctcctatatctcaaggtttactctgatacaaagtctatatttatagtaagagaat 3022080  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccac 204  Q
    |||||||||||||    ||||||||||||| ||| ||||||||||| |||||||||| ||||| ||||||||||||||    
T  3022079 cctcaataaaact---ccaacaaatctaggcccg-aaaatacgtttctgttttatttcctgctatcaaaatcggccac 3022006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 206
Target Start/End: Original strand, 34979818 - 34979993
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||| ||||| ||||||||||  ||||||| ||  |||| |||||| ||||||||||| ||||||| ||||||||||| |  |||||||    
T  34979818 acaaaccctagtttttttgttacctttctaaacgcttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatggccaaagaat 34979917  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    |||||||||||||||   |||||||||||| ||| || |||||||| |||||||||||||||||| ||||||||||||||    
T  34979918 cctcaataaaactgg---aacaaatctaggcccg-aagatacgtttctgttttattttctgctgtgaaaatcggccaccg 34979993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 14837289 - 14837087
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||| |||| | || |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  14837289 acaaaccctagttttgttgttgtcttttttaacccttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaagaat 14837190  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   | |||||||| |  || ||||||||||| | |||| |||||||||||||||||||| | |||    | ||||||||||| ||    
T  14837189 cctcaataaaactgg---agcaaatctaagctcg-aaaatacgtttgt-tttttttttctgctgtcaaaatcggtctccgaatgctccaaatcggccgcc 14837095  T
Q  227 gatttttg 234  Q
    ||||||||    
T  14837094 gatttttg 14837087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 44289307 - 44289426
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||||||||||||||||||||||| ||||| | |||||||||| |||| ||| || |||||| |  |||||||| | |||||||||||||||||||||    
T  44289307 acaaactctagttttgttgttgccttcctaaacctttgttttagtcccctctatatcaaggtttgctatgatacaaaacctatatttatagtaaaagaat 44289406  T
Q  127 cctcaataaaactggaacaa 146  Q
    ||||||||||||||||||||    
T  44289407 cctcaataaaactggaacaa 44289426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 22407648 - 22407744
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||   |||||| |||||||||  |||||||||||||||||||    
T  22407648 acaaaccctagttttgttgttgcctttctaaacccttgtttcagcaccctatatctcacagtttactctgatacaaggtctatatttatagtaaaag 22407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 42452799 - 42452703
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||| |||||||||||| ||||||    
T  42452799 acaaactctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttataataaaag 42452703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 17849130 - 17849032
Alignment:
Q  30 aactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    ||||||||||||||||||  ||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| | ||||||||||||||||| ||||    
T  17849130 aactctagttttgttgttatctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaagcatcc 17849032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 31733004 - 31733105
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||||||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| ||| |||||  ||||||||||||||||||| ||    
T  31733004 acaaactctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttactctgttacaaagtctatatttatagtaaaagcat 31733103  T
Q  127 cc 128  Q
    ||    
T  31733104 cc 31733105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 13910283 - 13910379
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  13910283 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 13910379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 19504584 - 19504680
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  19504584 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 19504680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 40032297 - 40032393
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  40032297 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 40032393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 42064531 - 42064435
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  42064531 acaaaccctagttttgttgttgcctttctaaacccttgtttcagctccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 42064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 22287575 - 22287671
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  ||||||||||| | ||||||  | ||||||  |||||||||||||||||||    
T  22287575 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctatatctcaaagtttactttaatacaaggtctatatttatagtaaaag 22287671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 24162451 - 24162547
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  24162451 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 24162547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 19007692 - 19007555
Alignment:
Q  2 aaaccctagtgtttgttccaaagggacaaactctag-----------ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggttt 90  Q
    ||||||||||||||||||||||| |||||||||||            ||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||    
T  19007692 aaaccctagtgtttgttccaaagagacaaactctatacaaaccataattttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggttt 19007593  T
Q  91 acactgatacaatatctatatttatagtaaaagaatcc 128  Q
    ||  ||||||||   |||||||||||||||||||||||    
T  19007592 actatgatacaaagcctatatttatagtaaaagaatcc 19007555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 19502250 - 19502345
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| |||||||||||||||||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||  ||||||||||||||||||    
T  19502250 acaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaa 19502345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 28196653 - 28196552
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| | |||||| ||  |||| |||||| | |||||| |||||||||    ||||||||||||||||||||    
T  28196653 acaaaccctagttttgttgttgcctttctaaacctttgtttcagccccctctatctcaatgtttactctgatacaaagcatatatttatagtaaaagaat 28196554  T
Q  127 cc 128  Q
    ||    
T  28196553 cc 28196552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 3021907 - 3021839
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    |||||||||||||| ||||| |  ||||||||||| |||||| ||||||||||||||||||||||||||    
T  3021907 tgaaaatcggccacggatttcctgcttccagaattccaatttcttcaattttgaggcactttcacaaca 3021839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 27104815 - 27104719
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||||||||| || |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  27104815 acaaaccctagttttgttgttgcctttctgaacccttgtttcagccccctctatctcaaagttttctctgatacaaggtctatatttatagtaaaag 27104719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 14837032 - 14836971
Alignment:
Q  269 cggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    |||||||| ||||||| |||||||||||  ||||| ||||||||||||||||||||||||||    
T  14837032 cggccaccaattttcagcttccagaattctaatttcttcaattttgaggcactttcacaaca 14836971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 18800565 - 18800637
Alignment:
Q  51 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||| |||||||| ||  ||||||||||||| |||||| |||||||||  |||||||||||||||||||    
T  18800565 tttctaaacccttgtttcagccccctatatctccatgtttaccctgatacaaggtctatatttatagtaaaag 18800637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 34980072 - 34980136
Alignment:
Q  264 aaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaa 328  Q
    ||||||||||||||||||||| |||| ||||||  ||||| ||||||||||||||| ||||||||    
T  34980072 aaaatcggccaccgattttcagcttctagaattctaatttcttcaattttgaggcattttcacaa 34980136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 43623807 - 43623903
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| | |||||| |   |||| |||||||  |||||| |||||||||  ||||| |||||||||||||    
T  43623807 acaaaccctagttttgttgttgcctttctaaaccattgtttcacccccctctatctcccagtttactctgatacaaggtctatttttatagtaaaag 43623903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 38019996 - 38019933
Alignment:
Q  215 aaatcggccaccgatttttgtggaaccaacagacaa-aaaatcagagttgaaaatcggccaccg 277  Q
    ||||||||||| ||||||||  |||||||||||||| |||| ||||||||||||||||||||||    
T  38019996 aaatcggccactgatttttgctgaaccaacagacaaaaaaagcagagttgaaaatcggccaccg 38019933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 6264351 - 6264479
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctagt-------tttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttaca 93  Q
    ||||||||||||||||| |||||| |||||||||||         |||||||||||||||||||| | |||||| ||  |||| |||||| | |||||      
T  6264351 caaaccctagtgtttgtaccaaagagacaaactctatacaaaccctttgttgttgcctttctaaacctttgtttcagccccctctatctcaaagtttagt 6264450  T
Q  94 ctgatacaatatctatatttatagtaaaa 122  Q
    |||||||||  ||||||||||||||||||    
T  6264451 ctgatacaaggtctatatttatagtaaaa 6264479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 17848459 - 17848360
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||| ||||||||| ||| |||| ||  |||| |||||| ||| ||  ||||||||||   |||||||||||||||||||||    
T  17848459 acaaaccctagttttgttgttgtctttctaaaccctcgtttgagccccctctatctcaaggatt--actgatacaaagcctatatttatagtaaaagaat 17848362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 15539991 - 15540036
Alignment:
Q  286 cttccagaatttcaattttttcaattttgaggcactttcacaacaa 331  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||    
T  15539991 cttccagaattccaatttcttcaattttgaggcactttcacaacaa 15540036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 146
Target Start/End: Original strand, 37963190 - 37963285
Alignment:
Q  51 tttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 146  Q
    |||||||| |||||||| ||  |||| |||||| |||||||| || ||||||  ||||||||||||||||||| ||||   |||||| ||||||||    
T  37963190 tttctaaacccttgtttcagccccctctatctcaaggtttactcttatacaaagtctatatttatagtaaaagtatccatcataaaattggaacaa 37963285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 21520895 - 21521030
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta-----------gttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccagg 87  Q
    |||||||||||||||||||||||| |||||||||||           |||||||||||||||||||||| |||||||| ||  ||  |||| |||| | |    
T  21520895 caaaccctagtgtttgttccaaagagacaaactctatacaagccctagttttgttgttgcctttctaaacccttgtttcagccccatctatctctcaaag 21520994  T
Q  88 tttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||  |||||||||  | |||||||||||||||||    
T  21520995 tttagtctgatacaaggtttatatttatagtaaaag 21521030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 12342695 - 12342767
Alignment:
Q  73 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 146  Q
    |||| |||||| |||||||| |||||||||| | ||||||||||||||||| ||||| || |||| ||||||||    
T  12342695 ccctctatctcaaggtttactctgatacaatgtgtatatttatagtaaaagtatcct-aaaaaaattggaacaa 12342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 5377676 - 5377724
Alignment:
Q  35 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctc 83  Q
    |||||||||||||||||||||||| |||||||| ||| |||| ||||||    
T  5377676 tagttttgttgttgcctttctaaacccttgtttcagtcccctctatctc 5377724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 23452476 - 23452516
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  23452476 acaaaccctagttttgttgttgcctttctaaacccttgttt 23452516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 38020218 - 38020178
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  38020218 acaaaccctagttttgttgttgcctttctaaacccttgttt 38020178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 42923755 - 42923846
Alignment:
Q  34 ctagttttgttgttgcctttctaaatccttgttttag--taccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||||||||||||||| ||||||| |||||||| ||  | | |||| |||| ||||||||  |||| |||  |||||||||||||||||||    
T  42923755 ctagttttgttgttgccattctaaacccttgtttcagcctcctctatctctcaaggtttactatgattcaaggtctatatttatagtaaaag 42923846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 22407611 - 22407646
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  22407611 caaaccctagtgtttgttccaaagagacaaactcta 22407646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 23452439 - 23452474
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  23452439 caaaccctagtgtttgttccaaagagacaaactcta 23452474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 40032260 - 40032295
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  40032260 caaaccctagtgtttgttccaaagagacaaactcta 40032295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 17897548 - 17897601
Alignment:
Q  94 ctgatacaatatctatatttatagtaaaagaat-cctcaataaaactggaacaa 146  Q
    |||||||||  ||||||||||||||||||| || |||||| |||||||||||||    
T  17897548 ctgatacaaggtctatatttatagtaaaagtatccctcaaaaaaactggaacaa 17897601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 45280223 - 45280320
Alignment:
Q  27 acaaactctagttttgttgttgccttt-ctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||| ||| ||||| |||||||| ||  |||| |||||| | |||| | |||||||||  | |||||||||||| ||||    
T  45280223 acaaaccctagttttgttgttgctttttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtatatatttatagtgaaag 45280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 6259054 - 6259150
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||| ||||||||||||||||  ||||||| |    ||| |||||| | |||||  || ||||||  |||||||||||||||||||    
T  6259054 acaaaccctagttttattgttgcctttctaaactcttgtttcatcctcctctatctcaaagtttagtctaatacaaggtctatatttatagtaaaag 6259150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 11578344 - 11578439
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||| |||||| ||| ||||| |||||||| ||  | || |||||| || ||||| |||||| ||  |||||||||||||||||||    
T  11578344 acaaaccctagtttttttgttgactt-ctaaacccttgtttcagcccactctatctcaagatttaccctgatataaggtctatatttatagtaaaag 11578439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34979781 - 34979813
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaact 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34979781 caaaccctagtgtttgttccaaagagacaaact 34979813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 35028538 - 35028494
Alignment:
Q  85 aggtttaca-ctgatacaatatctatatttatagtaaaagaatcc 128  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||    
T  35028538 aggtttacatctgatacaatgtctatatttatagtaaaagtatcc 35028494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 35215825 - 35215865
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||| |||||||| ||||||||    
T  35215825 acaaaccctagttttgttgttgcttttctaaacccttgttt 35215865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 9e-74; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 695955 - 695631
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatac 100  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||||| |   |||| |||||| ||||||||||| ||||    
T  695955 caaaccctagtgtttgttccaaagatacaaaccctagttttgttgttgcctttctaaacccttgtttcatccccctttatctcaaggtttacactcatac 695856  T
Q  101 aatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcgg 200  Q
    ||| |||||||| ||||||||||||| |||||||||||||||   |||||||||||  |   ||||||||||||||| ||||||||| || |||||||||    
T  695855 aatgtctatattcatagtaaaagaattctcaataaaactgga---acaaatctagg--cttgaaatacgtttatgttatattttctgttggcaaaatcgg 695761  T
Q  201 ccaccgtgctcaccaaatcggccaccgatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaa 300  Q
    ||| ||||||||||||||| |||||||||   ||| |||||   ||   ||| |  | || | ||||||||||||| ||||||| |||||||||||||||    
T  695760 ccatcgtgctcaccaaatcagccaccgataaatgttgaacctgaagctcaaataaaacaggtcaaaatcggccaccaattttcagcttccagaatttcaa 695661  T
Q  301 ttttttcaattttgaggcactttcacaaca 330  Q
    ||| ||||||||||||||||||||||||||    
T  695660 tttcttcaattttgaggcactttcacaaca 695631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 10474562 - 10474764
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||  |||| ||| || ||||||||||||||||||| |||||||||||||||| |||||    
T  10474562 acaaaccctagatttgttgttgcctttctaaatccttgtttcagccccctctatttcaaggtttacactgatacaatgtctatatttatagtaagagaat 10474661  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||    | ||||||||||||||    
T  10474662 cctcaataaaactgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgaatgctccaaatcggccacc 10474757  T
Q  227 gattttt 233  Q
    |||||||    
T  10474758 gattttt 10474764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 27 - 232
Target Start/End: Original strand, 39398232 - 39398431
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||||| | |||||| | ||||||||||||||||||||    
T  39398232 acaaaccctagttttgttgttgcctttctaaacccttgtttcagc-ccctctatctcaaggtttacaccggtacaatgtttatatttatagtaaaagaat 39398330  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  39398331 cctcaataaaactgg---aacaaatctaggcccg-aaaatacgtttatgttttattttctgctgtc-aaatcggccaccgtgctcaccgaatcggccacc 39398425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 27 - 233
Target Start/End: Complemental strand, 17072923 - 17072721
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||| ||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  17072923 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaat 17072824  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    ||||||||||| |||   |||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||    | ||||||||||||||    
T  17072823 cctcaataaaaatgg---aacaaatctagg-cctgaaaatacgtttatgttttattttctactgtcaaaatcggccaccgaatgctccaaatcggccacc 17072728  T
Q  227 gattttt 233  Q
    |||||||    
T  17072727 gattttt 17072721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 24126896 - 24126693
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||| |||||||||  ||||||| ||  || | |||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  24126896 acaaaccctagttttgttgttgtctttctaaactcttgtttcagccccatctatctcaaggtttacactgatataatgtctatatttatagtaaaagaat 24126797  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    ||||||||||||||||   ||||||||||   || ||||||| |||||||||||||||||||||||||||||||||||||    | ||||||||||||||    
T  24126796 cctcaataaaactgga---acaaatctagactcg-aaaatacatttatgttttattttctgctgtcaaaatcggccaccgaatactccaaatcggccacc 24126701  T
Q  227 gatttttg 234  Q
    ||||||||    
T  24126700 gatttttg 24126693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 73 - 234
Target Start/End: Complemental strand, 2723961 - 2723804
Alignment:
Q  73 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgttt 172  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||   |||||||||||| ||| |||||||||||    
T  2723961 ccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaacttgg---aacaaatctaggcccg-aaaatacgttt 2723866  T
Q  173 atgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 234  Q
     |||||||||| |||||||||||||||||||||     | |||||| |||||||||||||||    
T  2723865 ctgttttatttcctgctgtcaaaatcggccaccaaatgctccaaattggccaccgatttttg 2723804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 20043090 - 20042915
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||||||||||||||  ||||||| ||  |||| |||||| |||||| |  ||||||||   |||||||||||||||||||||    
T  20043090 acaaaccctagttttgttgttgcctttctaaacacttgtttcagccccctctatctcaaggtttgctatgatacaaagcctatatttatagtaaaagaat 20042991  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    |||||||||||||||   || ||||||||| ||| ||||||||||| |||||||||| ||| | ||||||||||||||||    
T  20042990 cctcaataaaactgg---aataaatctaggcccg-aaaatacgtttctgttttatttcctgatctcaaaatcggccaccg 20042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 20045050 - 20044875
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||||| || ||||| |||||||| ||  |||| | |||| |||||| | |||||||||   |||||||||||||||||||||    
T  20045050 acaaaccctagttttgttgttgctttcctaaacccttgtttcagccccctctgtctcaaggtttgctctgatacaaagcctatatttatagtaaaagaat 20044951  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    ||||||||||||||||   ||||||||||  ||| ||||||| ||| |||||||||  || |||||||||||||||||||    
T  20044950 cctcaataaaactgga---acaaatctagacccg-aaaatacatttctgttttattccctactgtcaaaatcggccaccg 20044875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 206
Target Start/End: Original strand, 34530905 - 34531079
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||||| ||||||||  ||||||| ||  |||| |||||| |||||||| ||||| |||  |||||||||| |||||||||||    
T  34530905 acaaaccctagttttgttgttgcatttctaaacacttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttacagtaaaagaat 34531004  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    ||| || ||||||||   |||||||||||| ||  ||||||||||||||||||||||||| || || || ||||||||||    
T  34531005 cct-aaaaaaactgg---aacaaatctagg-cctgaaaatacgtttatgttttattttctactatcgaattcggccaccg 34531079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 25904180 - 25904041
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta-----------gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtt 89  Q
    |||||||||||||||||||||||| |||||||||||           |||||||||||| ||||||||| |||||||| ||  |||| |||||| |||||    
T  25904180 caaaccctagtgtttgttccaaagagacaaactctatacaatccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtt 25904081  T
Q  90 tacactgatacaatatctatatttatagtaaaagaatcct 129  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  25904080 tacactgatacaatgtctatatttatagtaaaagcatcct 25904041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 31472852 - 31472953
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||||||  |||| |||||| ||||||||||| ||||||| || |||||||||||||||| ||    
T  31472852 acaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctcaaggtttacactaatacaatgtccatatttatagtaaaagcat 31472951  T
Q  127 cc 128  Q
    ||    
T  31472952 cc 31472953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 17818729 - 17818817
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttata 116  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||  |||| | |||| ||||||||||||||||||| ||||||||||||    
T  17818729 acaaactctagttttgttgttgcctttctaaactcttgtttcag-cccctctttctcaaggtttacactgatacaatgtctatatttata 17818817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 4236669 - 4236573
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  4236669 acaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaag 4236573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 31179610 - 31179706
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||| |||||||||||||||||||    
T  31179610 acaaaccctagttttgttgttgcctttctaaacccttgtttcagctccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaag 31179706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 40221562 - 40221466
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| |||||| |||||||| ||||  |||| |||||||||||||||||||    
T  40221562 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctcaaggtttactctgagtcaatgtctatatttatagtaaaag 40221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 2818538 - 2818671
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta-----------gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtt 89  Q
    |||||||||||||||||||||||| |||||||||||           ||||||||||| |||||||||| |||||||| ||  |||| |||||| | |||    
T  2818538 caaaccctagtgtttgttccaaagagacaaactctatacaaaccatagttttgttgttacctttctaaacccttgtttcagccccctctatctcaaagtt 2818637  T
Q  90 tacactgatacaatatctatatttatagtaaaag 123  Q
    ||| |||||||||  |||||||||||||||||||    
T  2818638 tactctgatacaaggtctatatttatagtaaaag 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 20507712 - 20507797
Alignment:
Q  38 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||| |||||||||||||||| |||||||| ||  |||| |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  20507712 tttttttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaagatctatatttatagtaaaag 20507797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 38882146 - 38882049
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttag-taccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||   |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  38882146 acaaaccctagttttgttgttgcctttctaaacccttgtttcagcccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 38882049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 2174959 - 2174863
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   || |||||||||||||||    
T  2174959 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctgtatttatagtaaaag 2174863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 12556162 - 12556258
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||||||||||||||| | ||||||| |||| ||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  12556162 acaaactctagttttgttgttgtcattctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 12556258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 25921712 - 25921808
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| ||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  25921712 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 25921808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 31542775 - 31542679
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  31542775 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 31542679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 31545120 - 31545024
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  31545120 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 31545024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 37706019 - 37706115
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||| ||||| |||||||||||||| | || ||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  37706019 acaaaccctagatttgtcgttgcctttctaaacctttatttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaag 37706115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 2723751 - 2723698
Alignment:
Q  274 accgattttcaacttccagaatttcaattttttcaattttgaggcactttcaca 327  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  2723751 accgattttcagcttccagaattccaatttcttcaattttgaggcactttcaca 2723698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 20044817 - 20044756
Alignment:
Q  270 ggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 331  Q
    ||||||||||||||  ||||||||||| |||||| |||||||||||| ||||||||||||||    
T  20044817 ggccaccgattttctgcttccagaattccaatttcttcaattttgagtcactttcacaacaa 20044756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 21948066 - 21947971
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| ||||||||| |||||||| ||  |||| |||||| |  ||||| |||||||||  |||||||||||||||||||    
T  21948066 acaaaccctagttttgttgttgtctttctaaacccttgtttcag-cccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaag 21947971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 26098490 - 26098586
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||| || |||||||| ||||||| |||| ||| ||  |||| ||||||||||||||| ||||| |||  |||||||||||||||||||    
T  26098490 acaaaccctagtcttcttgttgccattctaaacccttatttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 26098586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 39854523 - 39854428
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  39854523 acaaaccctagttttgttgttgcctttctaaacccttgtttcag-cccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 39854428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 6756571 - 6756438
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta-----------gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtt 89  Q
    |||||||||||||||||||||||| |||||||||||           |||||||||||||||||||||| | |||||| ||  |||| |||||| | |||    
T  6756571 caaaccctagtgtttgttccaaagagacaaactctatacaaaccttagttttgttgttgcctttctaaaccattgtttcagctccctctatctcaaagtt 6756472  T
Q  90 tacactgatacaatatctatatttatagtaaaag 123  Q
    ||   |||||||| ||||||||| ||||||||||    
T  6756471 taatatgatacaagatctatattaatagtaaaag 6756438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10586909 - 10586842
Alignment:
Q  1 caaaccctagtgtttgttcc-aaagggacaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||||||  ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||||    
T  10586909 caaaccctatcgtttgttcccaaagagacaaactctagttttgttgttgccattctaaacccttgttt 10586842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 41585946 - 41586041
Alignment:
Q  28 caaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||| ||||||||||| |||   ||||||| |||||||| ||  |||| |||||| |||||||| ||||||||| | ||||||||||||||||||    
T  41585946 caaaccctagttttgttcttgttattctaaacccttgtttcagccccctttatctcaaggtttactctgatacaaaacctatatttatagtaaaag 41586041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 24126640 - 24126579
Alignment:
Q  269 cggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    |||||||| ||||||| |||| |||||| |||||| |||||||||||| |||||||||||||    
T  24126640 cggccaccaattttcagcttctagaattccaatttcttcaattttgagacactttcacaaca 24126579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 27912576 - 27912520
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctc 83  Q
    |||||| ||||||||||||||||||||||||| |||||||| || ||||| ||||||    
T  27912576 acaaaccctagttttgttgttgcctttctaaacccttgtttcagcaccctctatctc 27912520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 1189811 - 1189949
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactc-----------tagttttgttgttgcctttctaaatccttgttttagtaccctata----tctcca 85  Q
    |||||||||||||||||||||||| |||||||||           ||||||||||||||||||||||||  ||||||| ||  |||| ||    |||| |    
T  1189811 caaaccctagtgtttgttccaaagagacaaactctatacaaaccgtagttttgttgttgcctttctaaactcttgtttcagccccctctatctctctcaa 1189910  T
Q  86 ggtttaca-ctgatacaatatctatatttatagtaaaag 123  Q
    |||||||| |||||||||  |||||||||||||||||||    
T  1189911 ggtttacatctgatacaaggtctatatttatagtaaaag 1189949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 10529301 - 10529434
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta-----------gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtt 89  Q
    |||||||||||||||||||||||| |||||||||||           |||||||||||||||||||||| |||||||| |   | || |||||| | |||    
T  10529301 caaaccctagtgtttgttccaaagagacaaactctataaaaatcctagttttgttgttgcctttctaaacccttgtttcaacccactctatctcaaagtt 10529400  T
Q  90 tacactgatacaatatctatatttatagtaaaag 123  Q
    | | |||||||||  |||||||||||||| ||||    
T  10529401 tgctctgatacaaggtctatatttatagtgaaag 10529434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 26097772 - 26097677
Alignment:
Q  28 caaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||| ||||||||||||||||| ||||||| | || ||| ||  |||| |||||| | |||||| ||||| |||  |||||||||||||||||||    
T  26097772 caaaccctagttttgttgttgccattctaaacctttatttcagccccctctatctcaaagtttactctgattcaaggtctatatttatagtaaaag 26097677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 36208597 - 36208519
Alignment:
Q  51 tttctaaatccttgtttt-agtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    |||||||| ||||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||    
T  36208597 tttctaaacccttgttttcagccccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagcatcc 36208519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 16776198 - 16776101
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctata-tttatagtaaaag 123  Q
    |||||| |||||||||||||||||||| |||| |||||||| ||  |||| |||||| | |||| | | |||||||  |||||| |||||||||||||    
T  16776198 acaaaccctagttttgttgttgcctttgtaaacccttgtttcagccccctctatctcaaagtttgctcagatacaaggtctatattttatagtaaaag 16776101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 18466723 - 18466625
Alignment:
Q  28 caaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||  |||| ||    |||| | |||||  |||||||||  ||||||||||||||||||    
T  18466723 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 18466625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 4410101 - 4410061
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  4410101 acaaaccctagttttgttgttgcctttctaaacccttgttt 4410061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 6747346 - 6747306
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  6747346 acaaactctagttttgttgttgcttttctaaacccttgttt 6747306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 15552285 - 15552229
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctc 83  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||| |||| ||||||    
T  15552285 acaaaccctagttttgttgttgcttttctaaacccttgtttcagtcccctctatctc 15552229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 18469051 - 18469011
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  18469051 acaaaccctagttttgttgttgcctttctaaacccttgttt 18469011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 20042838 - 20042770
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||||||| | ||||||  ||||||||||| |||||| ||||||||| |  |||||||||||||    
T  20042838 tgaaaatcggccatcaattttcttcttccagaattccaatttcttcaattttaaatcactttcacaaca 20042770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 34477293 - 34477333
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  34477293 acaaaccctagttttgttgttgcctttctaaacccttgttt 34477333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 34479658 - 34479698
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  34479658 acaaaccctagttttgttgttgcctttctaaacccttgttt 34479698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 18509557 - 18509652
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtacc-ctatatctccaggtttacactgatacaatatctatatttatagtaaa 121  Q
    |||||| ||||||||||||||| | ||||||| |||||||| ||  || |||| |||| | |||||  |||||||||  |||||||||||||||||    
T  18509557 acaaaccctagttttgttgttgtcattctaaacccttgtttcagcccctctatctctcaaagtttagtctgatacaaggtctatatttatagtaaa 18509652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 25921675 - 25921710
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  25921675 caaaccctagtgtttgttccaaagagacaaactcta 25921710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 36402530 - 36402565
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  36402530 caaaccctagtgtttgttccaaagagacaaactcta 36402565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 304
Target Start/End: Complemental strand, 42770562 - 42770523
Alignment:
Q  265 aaatcggccaccgattttcaacttccagaatttcaatttt 304  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  42770562 aaatcggccaccgattttctgcttccagaatttcaatttt 42770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 2954456 - 2954368
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtac-cctatatctccaggtttacactgatacaatatctatatttat 115  Q
    |||||| |||||||||||| || ||||||||| |||||||| | ||| ||| |||||| | ||||||||||||||||   ||||||||||    
T  2954456 acaaaccctagttttgttgctgtctttctaaacccttgtttca-tactcctctatctcaaagtttacactgatacaaagcctatatttat 2954368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 18596685 - 18596591
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| |||| ||   |||||||| ||  |||| |||| | |||||||| ||||| |||  |||||||||||||||||||    
T  18596685 acaaaccctagttttgttgttgtctttatac--ccttgtttcagccccctctatcccaaggtttactctgattcaaggtctatatttatagtaaaag 18596591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 21288839 - 21288806
Alignment:
Q  3 aaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||| |||||||||||    
T  21288839 aaccctagtgtttgttccaaagagacaaactcta 21288806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 16092439 - 16092479
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||| ||||||||||||||||||||| ||||||||    
T  16092439 acaaaccctaattttgttgttgcctttctaaacccttgttt 16092479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 17072671 - 17072619
Alignment:
Q  261 ttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaatttt 313  Q
    |||||||||||||||||||||||| ||| || |||| |||||| || ||||||    
T  17072671 ttgaaaatcggccaccgattttcagctttcaaaattccaatttctttaatttt 17072619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 21684690 - 21684730
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||||||| |||| ||||||||    
T  21684690 acaaaccctagttttgttgttgcctttttaaacccttgttt 21684730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 25804065 - 25804025
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  25804065 acaaaccctagttttgttgttgccattctaaacccttgttt 25804025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 36402567 - 36402663
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||| ||  ||| | ||||||| |||||||| ||  |||| |||||| | |||||| |||||| ||  |||||||||||||||||||    
T  36402567 acaaaccctagtttcgtgattgtcattctaaacccttgtttcagccccctctatctcaacgtttactctgatataaggtctatatttatagtaaaag 36402663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 9e-71; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 27 - 331
Target Start/End: Original strand, 3630103 - 3630423
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |  ||||| ||  |||| |||||| || |||||| ||||||||| ||||||||||||||||||||||    
T  3630103 acaaaccctagttttgttgttgcctttctaaaccgatgtttcagccccctctatctcaagttttacattgatacaatgtctatatttatagtaaaagaat 3630202  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   |||||||||||| || |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3630203 cctcaataaaactgg---aacaaatctagg-cccaaaaatacgtttctgttttattttctgctgtcaaaatcgaccaccgtgctcaccaaatcggccacc 3630298  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagt---------------------tgaaaatcggccaccgattttcaacttccagaatttcaattttt 305  Q
    || |||||  ||||||||| |||||||| ||||||                     ||||||||||||||||||||||| |||| |||||| |||||| |    
T  3630299 ga-ttttgccgaaccaacaaacaaaaaaacagagtccaaaatcggccacaatgctctgaaaatcggccaccgattttcagcttctagaattccaatttct 3630397  T
Q  306 tcaattttgaggcactttcacaacaa 331  Q
    ||||||||||||||||||||||||||    
T  3630398 tcaattttgaggcactttcacaacaa 3630423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 27 - 278
Target Start/End: Complemental strand, 13039829 - 13039582
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| | ||||||||| ||||||||||||| |||||||| ||   |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13039829 acaaacccaagttttgttcttgcctttctaaacccttgtttcagcctcctatatctcaaggtttacactgatacaatatctatatttatagtaaaagaat 13039730  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    ||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||  |||   ||| ||||||||    
T  13039729 cctcaataaaactgga---acaaatctaggtccg-aaaatacgtttatgttttattttctgttgtcaaaatcggccatcgaactccataaaccggccacc 13039634  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 278  Q
    ||||||||   |||||||| |||||||| ||||||  |||||||||||||||    
T  13039633 gatttttgccaaaccaacaaacaaaaaaccagagtgcaaaatcggccaccga 13039582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 29 - 277
Target Start/End: Complemental strand, 25477347 - 25477103
Alignment:
Q  29 aaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    |||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  25477347 aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaagaatcc 25477248  T
Q  129 tcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccga 228  Q
    ||||||||||||||   ||||||||||| ||| |||||| |||| |||||||||||||| ||||||||||||||||||  |||   |||||||||||| |    
T  25477247 tcaataaaactgga---acaaatctaggcccg-aaaatatgtttctgttttattttctgatgtcaaaatcggccaccgaactccataaatcggccaccaa 25477152  T
Q  229 tttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 277  Q
    ||||||  |||||||||||||||||| ||||||  ||||||| ||||||    
T  25477151 tttttgccgaaccaacagacaaaaaaccagagtgtaaaatcgaccaccg 25477103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 27 - 277
Target Start/End: Original strand, 3632177 - 3632420
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| |   |||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  3632177 acaaaccctagttttgttgttgcctttctaaacccttgtttcaactccctctatctcaaggtttacactgatacaatgtctatatttatagtaaacgaat 3632276  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   |||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  3632277 cctcaataaaactgg---aacaaatctaggcccg-aaaatacgtttctattttattttctgctgtcaaaatcggtcaccgtgctcaccaaatcggccact 3632372  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 277  Q
    |||||||   ||||||||  | |||||| ||||||  ||||||||||||||    
T  3632373 gattttt-ccgaaccaac--aaaaaaaaacagagtccaaaatcggccaccg 3632420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 27 - 278
Target Start/End: Complemental strand, 13057269 - 13057022
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||| ||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  13057269 acaaaccctagttttgttcttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaat 13057170  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    ||||||||||| |||   |||||||||||| ||| ||||||||||| ||||||||||||| || ||||||| ||||| ||   ||   ||||||||||||    
T  13057169 cctcaataaaattgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctactatcaaaattggccatcgaaatccataaatcggccacc 13057074  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 278  Q
    ||||||||  |||||||||||||||||| ||||||  |||||||||||||||    
T  13057073 gatttttgccgaaccaacagacaaaaaaccagagtgcaaaatcggccaccga 13057022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 234
Target Start/End: Original strand, 24338688 - 24338890
Alignment:
Q  28 caaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatc 127  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  24338688 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatc 24338787  T
Q  128 ctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccg 227  Q
     |||||||||||||   |||||||||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||    | |||||||||||||||    
T  24338788 ttcaataaaactgg---aacaaatctaggcccg-aaaatacgtttatgttttattttttggtgtcaaaatcggccaccgaatgctccaaatcggccaccg 24338883  T
Q  228 atttttg 234  Q
    |||||||    
T  24338884 atttttg 24338890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 12161794 - 12161996
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||| |||||||||| |||||||||||    
T  12161794 acaaaccctagttttgttgttgcatttctaaacccttgtttcagc-ccctttatctcaaggtttacaatgatacaatgtctatatttaaagtaaaagaat 12161892  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   |||||||||||| ||| |||||| |||| ||||||||||||||||||||||||| | |||| |||||||||||| |||||||    
T  12161893 cctcaataaaactgg---aacaaatctaggcccg-aaaatatgtttctgttttattttctgctgtcaaaatcagtcaccatgctcaccaaattggccacc 12161988  T
Q  227 gatttttg 234  Q
    ||||||||    
T  12161989 gatttttg 12161996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 10584196 - 10584026
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    ||||||||||||||||||||||| ||| |||| | ||||||     |||| |||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  10584196 acaaactctagttttgttgttgcttttataaacctttgttt-----ccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaagaat 10584102  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    ||||||||||||||||   ||||||||||| ||| |||||| |||  |||||||||||||||||||||||||||||||||    
T  10584101 cctcaataaaactgga---acaaatctaggcccg-aaaatatgttactgttttattttctgctgtcaaaatcggccaccg 10584026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 22490715 - 22490539
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatcc-ttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaa 125  Q
    |||||| ||||||||||||||||||||| ||| || |||||| ||  |||| |||||| ||||||||||| || |||| ||||||||||| |||||||||    
T  22490715 acaaaccctagttttgttgttgcctttcaaaaacccttgtttcagccccctctatctcaaggtttacactaattcaatgtctatatttatggtaaaagaa 22490616  T
Q  126 tcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    |||||||||||||||||   ||||||||||  ||| ||||||||||| |||||||||||||||| |||||||| |||||||    
T  22490615 tcctcaataaaactgga---acaaatctagacccg-aaaatacgtttctgttttattttctgctatcaaaatcagccaccg 22490539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 29 - 206
Target Start/End: Original strand, 13870663 - 13870835
Alignment:
Q  29 aaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    |||| ||||||||||||||||||||||||| |||| ||| ||  |||| |||||| |||||| | |||||||||   |||||||||||  ||||||||||    
T  13870663 aaaccctagttttgttgttgcctttctaaacccttatttcagc-ccctctatctcaaggtttgctctgatacaaagcctatatttatataaaaagaatcc 13870761  T
Q  129 tcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    |||||||||||||   |||||||||||| ||| ||||||||||| | |||||||| ||||||||||||||||||||||    
T  13870762 tcaataaaactgg---aacaaatctaggcccg-aaaatacgtttctattttatttcctgctgtcaaaatcggccaccg 13870835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 203
Target Start/End: Complemental strand, 14466433 - 14466237
Alignment:
Q  2 aaaccctagtgtttgttccaaagggacaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgataca 101  Q
    ||||||||||||||||| | ||  ||||||||||||||||| ||||| |||||||||  ||||||| |   | || |||||| |||||||  || |||||    
T  14466433 aaaccctagtgtttgttgccaatagacaaactctagttttgctgttgtctttctaaactcttgtttcaaccctctctatctcaaggtttattctaataca 14466334  T
Q  102 atatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggc 201  Q
    |  ||||||| ||||||||||||||||||||||||||||||   ||||||||||| ||| |||| |||||| |||||||||| |||||||| ||||| ||    
T  14466333 aagtctatatctatagtaaaagaatcctcaataaaactgga---acaaatctagg-ccg-aaaagacgtttctgttttatttcctgctgtcgaaatcagc 14466239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 20220135 - 20220000
Alignment:
Q  95 tgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaa 194  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||   ||||||||||  ||| |||||| |||| |||||||||||||||||||||    
T  20220135 tgatacaatgtctatatttatagtaaaggaatcatcaataaaactgga---acaaatctagacccg-aaaatatgtttttgttttattttctgctgtcaa 20220040  T
Q  195 aatcggccaccgtgctcaccaaatcggccaccgatttttg 234  Q
    |||||||||| |    | |||||||||||| |||||||||    
T  20220039 aatcggccacggaatgctccaaatcggccatcgatttttg 20220000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 24338960 - 24339028
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  24338960 tgaaaatcggccaccgattttcatcttccagaatttcaatttcttcaattttgaggcactttcacaaca 24339028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 22114119 - 22114014
Alignment:
Q  95 tgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaa 194  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||   ||||||||||  ||| |||||| |||| |||||||||||||||||||||    
T  22114119 tgatacaatgtctatatttatagtaaaggaatcatcaataaaactgga---acaaatctagacccg-aaaatatgtttttgttttattttctgctgtcaa 22114024  T
Q  195 aatcggccac 204  Q
    ||||||||||    
T  22114023 aatcggccac 22114014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 32447555 - 32447656
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||   |||||||||||||||||||||    
T  32447555 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttatagtaaaagaat 32447654  T
Q  127 cc 128  Q
    ||    
T  32447655 cc 32447656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 3390454 - 3390358
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  || | |||||| ||||||| ||||||||||| |||||||||||||||||||    
T  3390454 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccgtctatctcaaggtttatactgatacaatgtctatatttatagtaaaag 3390358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 8995554 - 8995458
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||||||  |||| ||||||   |||||| ||||||||| ||||||||||||||||||||    
T  8995554 acaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaag 8995458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 9020001 - 9019905
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||||||  |||| ||||||   |||||| ||||||||| ||||||||||||||||||||    
T  9020001 acaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaag 9019905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 1072116 - 1072212
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  || | |||||| | |||||| |||||||||| |||||||||||||||||||    
T  1072116 acaaacactagttttgttgttgcctttctaaacccttgtttcagctccttctatctcaaagtttactctgatacaatgtctatatttatagtaaaag 1072212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 13039577 - 13039509
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    |||||||||||||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  13039577 tgaaaatcggccaccggttttctgcttccagaatttcaatttcttcaattttgaggcactttcacaaca 13039509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 19227647 - 19227743
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | ||||||||| ||||||||||||||||||||    
T  19227647 acaaaccctagttttgttgttgcctttctaaacccttgtttgagccccctttatctcaaagtttgctctgatacaagatctatatttatagtaaaag 19227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 3233978 - 3234071
Alignment:
Q  35 tagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcct 129  Q
    |||||||||||||| |||||||||||||||||| ||  |||| |||||  ||||||||||||||||||  ||||||||||||||||||| |||||    
T  3233978 tagttttgttgttgtctttctaaatccttgtttcagccccctctatcttaaggtttacactgatacaa-gtctatatttatagtaaaagcatcct 3234071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 3632425 - 3632494
Alignment:
Q  261 ttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||||| || ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  3632425 ttgaaaatcgggcatcgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaaca 3632494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 13057017 - 13056949
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||||||||| ||||||  ||||||||||| |||||| ||||||||||||||||||||||||||    
T  13057017 tgaaaatcggccaccaattttctgcttccagaattccaatttcttcaattttgaggcactttcacaaca 13056949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 14507414 - 14507510
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||||||  |||| |||||| | |||| | || ||||||  |||||||||||||||||||    
T  14507414 acaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaag 14507510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 17852617 - 17852521
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||  |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  17852617 acaaactctagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaag 17852521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 11983268 - 11983364
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||  | |||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  11983268 acaaaccctagttttgttgttgcctttctaagcctttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 11983364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 15532920 - 15533016
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||| |||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  15532920 acaaaccctagttttgttgttacctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15533016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 15541379 - 15541475
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||| ||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  15541379 acaaaccctagttttgtttttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15541475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 28241560 - 28241656
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  28241560 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaag 28241656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 30729067 - 30729163
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| | ||||||||||||| ||||| | | |||||||| ||  |||| |||||| |||||||| ||||||||| ||||||||||||||||||||    
T  30729067 acaaacccaagttttgttgttgtctttcgatacccttgtttcagccccctctatctcaaggtttactctgatacaagatctatatttatagtaaaag 30729163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 13870841 - 13870911
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaaa 332  Q
    ||||||||| ||||||||||||  |||||| |||| |||||| ||||||||| ||||||||||||||||||    
T  13870841 tgaaaatcgaccaccgattttctgcttccaaaattccaatttcttcaattttaaggcactttcacaacaaa 13870911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 3028148 - 3028265
Alignment:
Q  86 ggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttc 185  Q
    |||||||  ||||||||  ||||||||||||||||||| ||| | || ||||||| |||||||| ||||||  |||||| |||||||||||||||| | |    
T  3028148 ggtttactttgatacaaggtctatatttatagtaaaagtatcataaa-aaaactgaaacaacaa-tctaggctcgaaaa-tacgtttatgttttatatcc 3028244  T
Q  186 tgctgtcaaaatcggccaccg 206  Q
    |||||||||| || |||||||    
T  3028245 tgctgtcaaattcagccaccg 3028265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 12195754 - 12195850
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  12195754 acaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 12195850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 15346441 - 15346365
Alignment:
Q  52 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    ||||||| ||||| || ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  15346441 ttctaaacccttggttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatcc 15346365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 15530361 - 15530457
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||  ||||| || ||  |||| |||||||  |||||| |||||||||  |||||||||||||||||||    
T  15530361 acaaaccctagttttgttgttgccattctaagcccttgcttcagccccctctatctcccagtttactctgatacaaggtctatatttatagtaaaag 15530457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 22490483 - 22490415
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||||||||||| ||||||||| ||| |||||||  ||||| ||||||||||||||||||||| ||||    
T  22490483 tgaaaatcggccatcgattttcagctttcagaattctaatttcttcaattttgaggcactttcataaca 22490415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 30034842 - 30034942
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctc----caggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  |||| ||||||     | |||||  |||||||||  ||||||||||||||||||    
T  30034842 acaaactctaattttgttgttgcctttctaaacccttgttttagctccctctatctctcttaaagtttagcctgatacaaggtctatatttatagtaaaa 30034941  T
Q  123 g 123  Q
    |    
T  30034942 g 30034942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 10583950 - 10583884
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaa 328  Q
    ||||||| | |||||| |||||| ||||||||||| |||||| ||||||||| ||||||||||||||    
T  10583950 tgaaaatggaccaccggttttcagcttccagaattccaatttcttcaattttaaggcactttcacaa 10583884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 14459004 - 14459093
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttata 116  Q
    |||||| ||||||||||||||||||||||||| |||| ||| ||  |||| |||||| | |||| | |||||||||  ||||||||||||    
T  14459004 acaaaccctagttttgttgttgcctttctaaacccttatttcagccccctctatctcaaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 25466467 - 25466583
Alignment:
Q  85 aggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttatttt 184  Q
    |||||||| |||| | || |||||||||||||||||||| |||||| | | ||||||   |||||||||  | ||| |||||||||||||||||||||||    
T  25466467 aggtttactctgacaaaagatctatatttatagtaaaagtatcctcga-agaactgg---aacaaatctgagcccg-aaaatacgtttatgttttatttt 25466561  T
Q  185 ctgctgtcaaaatcggccaccg 206  Q
    |||||   ||||||||| ||||    
T  25466562 ctgctagtaaaatcggcaaccg 25466583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 1230488 - 1230528
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  1230488 acaaaccctagttttgttgttgcctttctaaacccttgttt 1230528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 2629124 - 2629164
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  2629124 acaaaccctagttttgttgttgcctttctaaacccttgttt 2629164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 4816470 - 4816510
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  4816470 acaaaccctagttttgttgttgcctttctaaacccttgttt 4816510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 19704808 - 19704848
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  19704808 acaaaccctagttttgttgttgcctttctaaacccttgttt 19704848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 26065061 - 26065021
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  26065061 acaaactctagttttgttgttgccattctaaacccttgttt 26065021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 26085030 - 26084990
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  26085030 acaaactctagttttgttgttgccattctaaacccttgttt 26084990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 32280071 - 32279976
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||| ||||||||||||||| |||| |||||||| ||  |||| |||||||| ||||||  ||||||||  ||||||| ||||| |||||    
T  32280071 acaaaccctagatttgttgttgcctttttaaacccttgtttcag-cccctctatctccaagtttactatgatacaaggtctatatatataggaaaag 32279976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 1072079 - 1072114
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  1072079 caaaccctagtgtttgttccaaagagacaaactcta 1072114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 1230451 - 1230486
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  1230451 caaaccctagtgtttgttccaaagagacaaactcta 1230486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 28241523 - 28241558
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  28241523 caaaccctagtgtttgttccaaagagacaaactcta 28241558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 30967313 - 30967278
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  30967313 caaaccctagtgtttgttccaaagagacaaactcta 30967278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 20219980 - 20219938
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaatttt 304  Q
    ||||||||||||||||||||||| |||||| |||| |||||||    
T  20219980 tgaaaatcggccaccgattttcagcttccataattccaatttt 20219938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 20915602 - 20915693
Alignment:
Q  34 ctagttttgttgttgcctttctaaatccttgttttagtaccctatatctc---caggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||||||||||||||||||||||| |||||||| ||  |||| ||||||   ||  ||||  |||||||||  |||||||||||||||||||    
T  20915602 ctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctca-atttagcctgatacaaggtctatatttatagtaaaag 20915693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 14466197 - 14466136
Alignment:
Q  264 aaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttca 325  Q
    ||||| ||||| | |||||| ||||| ||||||||||||| |||||||||||| || |||||    
T  14466197 aaaattggccatcaattttctacttctagaatttcaatttcttcaattttgagtcagtttca 14466136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 11138325 - 11138277
Alignment:
Q  80 tctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    ||||||||||||| ||||||||| || ||||| ||||||||||| ||||    
T  11138325 tctccaggtttactctgatacaagatttatatctatagtaaaagtatcc 11138277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 5e-69; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 27 - 329
Target Start/End: Original strand, 25251516 - 25251814
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||| ||||||||| | |||||| ||  |||| |||||| |||||||| |||||||||  |||||||||||||||||| |||    
T  25251516 acaaaccctagttttgttgttgtctttctaaacctttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaaaaat 25251615  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    | |||||||||||||   |||||||||||| ||| ||||||||||| | |||||| ||||||||| |||||||||||||     | |||||| |||||||    
T  25251616 cttcaataaaactgg---aacaaatctaggcccg-aaaatacgtttcttttttatattctgctgttaaaatcggccaccaaatgctccaaattggccacc 25251711  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcac 326  Q
    ||||||||  |||||||||||||||||| |||   | ||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||    
T  25251712 gatttttgccgaaccaacagacaaaaaaacagcactcaaaatcggccaccgattttctgcttccagaattccaatttcttcaattttgaggcactttcac 25251811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 28 - 331
Target Start/End: Original strand, 25248756 - 25249055
Alignment:
Q  28 caaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatc 127  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||| ||| |||| ||||    
T  25248756 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttctagaaaaaaaatc 25248855  T
Q  128 ctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccg 227  Q
    |||||||||||| |   |||||||||||| ||| ||| || |||| |||||||||| ||||||  ||||||||| ||||    | ||||||||||||||     
T  25248856 ctcaataaaacttg---aacaaatctaggcccg-aaagtatgtttctgttttatttcctgctgcaaaaatcggctaccgaatgctccaaatcggccacca 25248951  T
Q  228 atttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcaca 327  Q
    |||||||  |||||||| ||||||||| |||   | ||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||| |||||    
T  25248952 atttttgccgaaccaactgacaaaaaaacagtactcaaaatcggccaccgattttctgcttccagaattccaatttcttcaattttgaggcactatcaca 25249051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 27 - 277
Target Start/End: Complemental strand, 18839627 - 18839382
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||||||| |||||| |||||||| ||  |||| ||||||  |||||||| | ||||||| ||||||||||||||||||||||    
T  18839627 acaaaccctagttttgttgttgcctatctaaacccttgtttcagccccctctatctcatggtttacaataatacaatgtctatatttatagtaaaagaat 18839528  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||   | |||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||    | ||||||||||||||    
T  18839527 cctcaataaaact---ataacaaatctaggcccg-aaaatacgtttctgtttaattttctgctgtcaaaatcggccaccgaatgctccaaatcggccacc 18839432  T
Q  227 gatttttgtggaaccaacagacaaaaaatcagagttgaaaatcggccaccg 277  Q
    ||||||||  |||||||||| ||||||| ||||||  ||||||||||||||    
T  18839431 gatttttgccgaaccaacaggcaaaaaa-cagagtccaaaatcggccaccg 18839382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 31489990 - 31489784
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaact---------ctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggttta 91  Q
    |||||||||||||||||||||||| ||||||||         |||||||||||||| |||||||||| |||||||| |   |||| |||||| |||||||    
T  31489990 caaaccctagtgtttgttccaaagagacaaactatacaaaccctagttttgttgttacctttctaaacccttgtttcaaccccctctatctcaaggttta 31489891  T
Q  92 cactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgt 191  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||   | |||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  31489890 cactaatacaatgtctatatttatagtaaaagaatcctcaataaaact---agaacaaatctaggcccg-aaaatacgtttctgttttattttctgctgt 31489795  T
Q  192 caaaatcggcc 202  Q
    |||||||||||    
T  31489794 caaaatcggcc 31489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 50248776 - 50249016
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta-----------gttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtt 89  Q
    |||||||||||||||||||||||| |||||||||||           |||||||||||| |||| |||| | |||||| ||  |||| |||||| |||||    
T  50248776 caaaccctagtgtttgttccaaagagacaaactctatataaatcatagttttgttgttgtctttttaaacctttgtttcagctccctctatctcaaggtt 50248875  T
Q  90 tacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgct 189  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||||| |||  ||||| |||| ||||||| ||||||||    
T  50248876 tacactgatacaatgtctatatttatagtaaaagaatcctcaataaaactgg---aacaaatctaggcccg-taaatatgtttctgttttaatttctgct 50248971  T
Q  190 gtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttg 234  Q
    |||||||||||||||||    | ||||||||||||||||||||||    
T  50248972 gtcaaaatcggccaccgaatgctccaaatcggccaccgatttttg 50249016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 27 - 204
Target Start/End: Original strand, 17186369 - 17186542
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||| ||| ||  |||| |||||| |||||| | ||||||||| ||||||||||||| |||||||||    
T  17186369 acaaaccctagttttgttgttgcctttctaaacccttatttcagccccctctatctcaaggtttgctctgatacaaaatctatatttatattaaaagaat 17186468  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccac 204  Q
    |||||||||||||||   ||||||| ||||||| |||||||||||| | |||||||| ||||||||||||||||||||    
T  17186469 cctcaataaaactgg---aacaaatttaggtcc-aaaaatacgtttcttttttatttcctgctgtcaaaatcggccac 17186542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 36 - 278
Target Start/End: Complemental strand, 17324096 - 17323858
Alignment:
Q  36 agttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataa 135  Q
    ||||||||||| |||||||| || |||||||||||  | || |||||| |||||||| || ||||||  |||||||||||| ||||||||||||||||||    
T  17324096 agttttgttgtggcctttctgaacccttgttttagccctctctatctcaaggtttactctaatacaaagtctatatttataataaaagaatcctcaataa 17323997  T
Q  136 aactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgatttttgt 235  Q
    |||||||||||   || ||||  |||||  ||||||| ||||||| |||||||||||||||| ||||||||  |||   ||| ||| ||||||||||||     
T  17323996 aactggaacaa---atttaggcacgaaag-tacgtttctgttttaatttctgctgtcaaaattggccaccgaactccataaaccggtcaccgatttttgc 17323901  T
Q  236 ggaaccaacagacaaaaaatcagagttgaaaatcggccaccga 278  Q
     |||||||||||||||||| |||||   |||||||||||||||    
T  17323900 cgaaccaacagacaaaaaaccagagcataaaatcggccaccga 17323858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 18307149 - 18307054
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||| ||||    
T  18307149 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaa 18307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 11457716 - 11457817
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||| ||||||||| | |||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||    
T  11457716 acaaaccctagttttgttgttgtctttctaaaccattgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcat 11457815  T
Q  127 cc 128  Q
    ||    
T  11457816 cc 11457817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 31423117 - 31423234
Alignment:
Q  29 aaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    |||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| |||||||||||||||||||   ||||||||||||||||| |||     
T  31423117 aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgcttatatttatagtaaaagtatct 31423216  T
Q  129 tcaataaaactggaacaa 146  Q
     | |||||| ||||||||    
T  31423217 cccataaaattggaacaa 31423234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 50076913 - 50077014
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||  |  | |||||| ||||||||||||||||||| ||||||||||||||||||| ||    
T  50076913 acaaaccctagttttgttgttgtctttctaaatccttgtttcagccctttctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcat 50077012  T
Q  127 cc 128  Q
    ||    
T  50077013 cc 50077014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 17318933 - 17318832
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||  |||||||| | ||||||||||||||||| |||    
T  17318933 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactatgatacaaaacctatatttatagtaaaaaaat 17318834  T
Q  127 cc 128  Q
    ||    
T  17318833 cc 17318832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 6756567 - 6756471
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||  |||||||| ||| |||| ||| || |||||||||| |||||||| ||||||||||||| |||||    
T  6756567 acaaaccctagttttgttgttgcctttctaagcccttgtttcagtcccctctatttcaaggtttacaccgatacaatgtctatatttatagcaaaag 6756471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 17323853 - 17323785
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    |||||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  17323853 tgaaaatcggtcaccgattttctacttccagaattccaatttcttcaattttgaggcactttcacaaca 17323785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 50079063 - 50079163
Alignment:
Q  28 caaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatc 127  Q
    ||||| |||||||||||| || ||||||||| |||||||| ||  |||| |||||| ||||||||||| ||||||| ||||||||||||||||||| |||    
T  50079063 caaaccctagttttgttgctgtctttctaaacccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagcatc 50079162  T
Q  128 c 128  Q
    |    
T  50079163 c 50079163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 51750079 - 51749983
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  51750079 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 51749983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 13215121 - 13215025
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| |  ||||| |||||||||  |||||||||||||||||||    
T  13215121 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaag 13215025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 15823586 - 15823490
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  15823586 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctctaagtttactttgatacaaggtctatatttatagtaaaag 15823490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 41646960 - 41646864
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||| ||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  41646960 acaaaccctagttttgttgttgcctttctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 41646864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 50249065 - 50249136
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaaaa 333  Q
    |||||||| ||  |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  50249065 tgaaaatcagcggccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaacaaaa 50249136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 2949472 - 2949568
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||  |||| |||||| |||||| | | ||| |||||||||||||||| |||||||    
T  2949472 acaaactctagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggttttctcggattcaatatctatatttattgtaaaag 2949568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 13761877 - 13761781
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||| |||||||||||||||||| |||||||| ||  | || |||||||| |||| | |||||||||  |||||||||||||||||||    
T  13761877 acaaaccctagttatgttgttgcctttctaaacccttgtttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 13761781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 16226207 - 16226111
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||| |||||||| |||||||||||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  16226207 acaaaccctagttttgttgttgcttttctaaacccttgttttagacccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 16226111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 17324877 - 17324973
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| | ||||||||||||||| ||||||| |||||||||||  |||| ||||| ||||||||| ||| | |||  |||||||||||||||||||    
T  17324877 acaaaccccagttttgttgttgccattctaaacccttgttttagccccctgtatcttcaggtttactctggttcaaggtctatatttatagtaaaag 17324973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 20302499 - 20302403
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||| ||||||    
T  20302499 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttataataaaag 20302403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 28207307 - 28207403
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| ||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  28207307 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 28207403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 38925719 - 38925815
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||||||||| ||  ||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  38925719 acaaaccctagttttgttgttgcctttctgaactcttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 38925815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 47451688 - 47451592
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||| ||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  47451688 acaaaccctagttttgttgttgccattccaaacccttgtttaagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 47451592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 31425260 - 31425335
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaa 102  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||| ||||||||    
T  31425260 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaggtttacattgatacaa 31425335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16432471 - 16432405
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||||||||||||||  | ||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  16432471 caaaccctagtgtttgtcgccaagagacaaaccctagttttgttgttgcctttctaaacccttgttt 16432405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 17186620 - 17186690
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaaa 332  Q
    |||||||| |||||||||||||  |||||||| ||||||||| |||||||||||| | |||||||||||||    
T  17186620 tgaaaatcagccaccgattttctgcttccagattttcaatttcttcaattttgagtcgctttcacaacaaa 17186690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 16428693 - 16428592
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||   ||||| | |||||| || | |||||||||||||||||| ||    
T  16428693 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctaatggtttgctctgatataaaacctatatttatagtaaaagtat 16428594  T
Q  127 cc 128  Q
    ||    
T  16428593 cc 16428592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 50307788 - 50307889
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||| ||||||||||||| |||| ||| ||  || |||||||| ||||||||  ||||||||    ||||||||||||||||||||    
T  50307788 acaaaccctagttttgttattgcctttctaaacccttttttcagccccatatatctcaaggtttactttgatacaaagcttatatttatagtaaaagaat 50307887  T
Q  127 cc 128  Q
    ||    
T  50307888 cc 50307889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 6823055 - 6822959
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||  ||||||||||    
T  6823055 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaag 6822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 9241327 - 9241446
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttag-taccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaa 125  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||   |||| |||||  |||||||| |||||||||   |||||||||||||||||| |    
T  9241327 acaaaccctagttttgttgttgcctttctaaa-ccttgtttcagcccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagta 9241425  T
Q  126 tcctcaataaaactggaacaa 146  Q
     || | |||||| ||||||||    
T  9241426 acccccataaaattggaacaa 9241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 31735762 - 31735862
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatc----tccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||| ||||||||||||||||||||||||| |||||||||||  |||| ||||    || | |||||  |||||||||  ||||||||||||||||||    
T  31735762 acaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctcattcaaagtttagcctgatacaaggtctatatttatagtaaaa 31735861  T
Q  123 g 123  Q
    |    
T  31735862 g 31735862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 2617556 - 2617459
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaaga 124  Q
    |||||| ||||||||||||||| ||||||||| |||||||| ||   ||| |||||| | |||| | |||||||||  |||||||||||||| |||||    
T  2617556 acaaaccctagttttgttgttgtctttctaaacccttgtttcagcctcctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaaga 2617459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 51752394 - 51752309
Alignment:
Q  38 ttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||| ||||||||||  ||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  51752394 ttttgttgttacctttctaaactcttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 51752309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 6995941 - 6996037
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| | ||||||  |  |||| |||||| || ||||| ||||| |||  |||||||||||| ||||||    
T  6995941 acaaaccctagttttgttgttgcctttctaaaccgttgtttcggccccctctatctcaagatttactctgattcaaggtctatatttataataaaag 6996037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 10400069 - 10400165
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| | ||||||| |||||||| ||  |||| |||||||  |||| | |||||||||  ||||||||||||| |||||    
T  10400069 acaaaccctagttttgttgttgtcattctaaacccttgtttcagccccctctatctcccagtttgctctgatacaaggtctatatttatagaaaaag 10400165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 12302746 - 12302847
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttaca-ctgatacaatatctatatttatagtaaa 121  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||  |||| ||    |||| ||||||||| |||||||||  |||||||||||||||||    
T  12302746 acaaaccctagttttgttgttgcatttctaaacccttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaa 12302845  T
Q  122 ag 123  Q
    ||    
T  12302846 ag 12302847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 20291497 - 20291401
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| |   |||| |||||| |  ||| | || ||||||  |||||||||||||||||||    
T  20291497 acaaaccctagttttgttgttgcctttctaaacccttgtttcatctccctctatctcaaaatttgctctaatacaaggtctatatttatagtaaaag 20291401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 28998494 - 28998590
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| | ||||||| |||||||| ||   ||| |||||| | |||||| ||||| |||  |||||||||||||||||||    
T  28998494 acaaaccctagttttgttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaag 28998590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 29004210 - 29004306
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| | ||||||| |||||||| ||   ||| |||||| | |||||| ||||| |||  |||||||||||||||||||    
T  29004210 acaaaccctagttttgttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaag 29004306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 28842535 - 28842437
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  ||  |||| |||| | |||| | |||||||||  | |||||||||||||||||    
T  28842535 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtttatatttatagtaaaag 28842437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 31489793 - 31489726
Alignment:
Q  264 aaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 331  Q
    |||||||||| || ||||||  ||||||||||| |||||| ||||||||| |||||||||| ||||||    
T  31489793 aaaatcggcccccaattttctgcttccagaattccaatttcttcaattttaaggcactttcgcaacaa 31489726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 14183852 - 14183945
Alignment:
Q  52 ttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 146  Q
    ||||||| |||||||| ||  | || |||||| |||||||| ||||||||   ||||||||||||||||||||||||| || |||||| ||||||    
T  14183852 ttctaaacccttgtttcagccctctctatctcaaggtttactctgatacatggtctatatttatagtaaaagaatcct-aaaaaaactagaacaa 14183945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 30790681 - 30790731
Alignment:
Q  73 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||| |||||| |||||||| |||||||||| |||||||||||||||||||    
T  30790681 ccctctatctcaaggtttactctgatacaatgtctatatttatagtaaaag 30790731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 43104141 - 43104030
Alignment:
Q  85 aggtttacactgatacaatatctatatttatagtaaaagaatcc-tcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattt 183  Q
    |||||||| |||||||||  ||||||||||||||||||| |||| |||| |||||||||||||   ||||| | || ||||||| |||| ||||||||||    
T  43104141 aggtttactctgatacaaggtctatatttatagtaaaagtatccctcaa-aaaactggaacaa---atctaagccc-aaaaatatgtttctgttttattt 43104047  T
Q  184 tctgctgtcaaaatcgg 200  Q
    | || || |||||||||    
T  43104046 tatgttggcaaaatcgg 43104030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 6823925 - 6823828
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttag-taccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||   |||| |||||| | |||| | |||||||||  |||||||  ||||||||||    
T  6823925 acaaaccctagttttgttgttgcctttctaaacccttgtttcagcccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaag 6823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 18800861 - 18800914
Alignment:
Q  78 tatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctca 131  Q
    |||||| |||||||| |||||||||  ||||||||||||||||||| |||||||    
T  18800861 tatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatcctca 18800914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 42922273 - 42922173
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||| |||||| ||| ||||| |||| ||| |   |||| |||||  |||||||| ||||||||| |||||||||||||||||||| ||    
T  42922273 acaaaccctagttttcttgttgactt-ctaaacccttatttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagtat 42922175  T
Q  127 cc 128  Q
    ||    
T  42922174 cc 42922173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 49495468 - 49495541
Alignment:
Q  55 taaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    |||| |||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||||||| ||||    
T  49495468 taaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatcc 49495541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 4131620 - 4131660
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  4131620 acaaaccctagttttgttgttgccattctaaatccttgttt 4131660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 9463485 - 9463525
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  9463485 acaaaccctagttttgttgttgcctttctaaacccttgttt 9463525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 14098211 - 14098307
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||| ||||||||| |||| | |||||| ||| |||| |||||| | |||||   ||||||||  |||||||||||||| ||||    
T  14098211 acaaaccctagttttgtagttgcctttttaaaccattgtttcagtcccctctatctcaaagtttagtttgatacaaggtctatatttatagtgaaag 14098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 15295075 - 15295115
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  15295075 acaaaccctagttttgttgttgcctttctaaacccttgttt 15295115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 16231641 - 16231545
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||| ||||||| |||||| | |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  16231641 acaaaccctagttttcttgttgcttttctagacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 16231545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 21948428 - 21948468
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  21948428 acaaaccctagttttgttgttgcctttctaaacccttgttt 21948468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 25127912 - 25127872
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  25127912 acaaaccctagttttgttgttgcctttctaaacccttgttt 25127872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 39932113 - 39932073
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  39932113 acaaaccctagttttgttgttgcctttctaaacccttgttt 39932073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 4131583 - 4131618
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  4131583 caaaccctagtgtttgttccaaagagacaaactcta 4131618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 18839350 - 18839311
Alignment:
Q  289 ccagaatttcaattttttcaattttgaggcactttcacaa 328  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  18839350 ccagaattccaatttattcaattttgaggcactttcacaa 18839311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 21948391 - 21948426
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  21948391 caaaccctagtgtttgttccaaagagacaaactcta 21948426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 24325740 - 24325705
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  24325740 caaaccctagtgtttgttccaaagagacaaactcta 24325705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 28840720 - 28840622
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccc--tatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||| |||||||||| |||||||| |   |||  ||| |||| | |||| | |||||||||  |||||||||||||||||||    
T  28840720 acaaaccctagttttgttgtttcctttctaaacccttgtttcatccccctgtatctctcaaagtttgctctgatacaaggtctatatttatagtaaaag 28840622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 38925682 - 38925717
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  38925682 caaaccctagtgtttgttccaaagagacaaactcta 38925717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 40133929 - 40133874
Alignment:
Q  73 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    ||||||||||| || ||||| |||||||||   |||||||||||||||||||||||    
T  40133929 ccctatatctcaagatttactctgatacaaagcctatatttatagtaaaagaatcc 40133874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 48665254 - 48665219
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  48665254 caaaccctagtgtttgttccaaagagacaaactcta 48665219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 6995905 - 6995939
Alignment:
Q  2 aaaccctagtgtttgttccaaagggacaaactcta 36  Q
    ||||||||||||||||||||||| |||||||||||    
T  6995905 aaaccctagtgtttgttccaaagagacaaactcta 6995939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 27337181 - 27337219
Alignment:
Q  29 aaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  27337181 aaaccctagttttgttgttgcctttctaaacccttgttt 27337219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 16431095 - 16431022
Alignment:
Q  73 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaa 146  Q
    |||| |||||| |||||| | ||||||||| | |||||||||||||||||| ||||   |||||| ||||||||    
T  16431095 ccctctatctcaaggtttgctctgatacaaaacctatatttatagtaaaagtatccctcataaaattggaacaa 16431022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 48665210 - 48665177
Alignment:
Q  34 ctagttttgttgttgcctttctaaatccttgttt 67  Q
    ||||||||||||||||||||||||| ||||||||    
T  48665210 ctagttttgttgttgcctttctaaacccttgttt 48665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 9459658 - 9459698
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||| ||||||||| ||||||||    
T  9459658 acaaaccctagttttgttgttgactttctaaacccttgttt 9459698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28207270 - 28207302
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaact 33  Q
    |||||||||||||||||||||||| ||||||||    
T  28207270 caaaccctagtgtttgttccaaagagacaaact 28207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 39462559 - 39462463
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||| |||| |||||||| | |||||| ||    || |||||| | |||||| |||||||||  |||||||||||||| ||||    
T  39462559 acaaaccctagttttgtttttgcatttctaaacctttgtttcagccttctctatctcaaagtttactctgatacaaggtctatatttatagtgaaag 39462463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 46431948 - 46431988
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||| ||||||||||||||||||||| ||||||||    
T  46431948 acaaaccctacttttgttgttgcctttctaaacccttgttt 46431988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 47177402 - 47177362
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||| |||||||| ||||||||    
T  47177402 acaaaccctagttttgttgttgcttttctaaacccttgttt 47177362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 47179753 - 47179713
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||| |||||||| ||||||||    
T  47179753 acaaaccctagttttgttgttgcttttctaaacccttgttt 47179713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 27 - 330
Target Start/End: Original strand, 38270225 - 38270543
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||   | | |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  38270225 acaaaccctagttttgttgttgcctttctaaacccttgtttcagcctcttctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaat 38270324  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    |||||||||||||||   |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||    | | |||||||||| |    
T  38270325 cctcaataaaactgg---aacaaatctaggcccg-aaaatacgtttctgttttattttctgctgtcaaaatcggccaccgaatgctctaaatcggccatc 38270420  T
Q  227 gatttttgtggaaccaacagacaaaaaatca-------------------gagttgaaaatcggccaccgattttcaacttccagaatttcaattttttc 307  Q
    ||||||||  |||||||  | ||||||| ||                   |  |||||||||||||||||||||||  || ||||||||||||||| |||    
T  38270421 gatttttgccgaaccaaaggccaaaaaaacagtccaaaatcggctatcgtgctttgaaaatcggccaccgattttctgctaccagaatttcaatttcttc 38270520  T
Q  308 aattttgaggcactttcacaaca 330  Q
    |||||||||||||||||||||||    
T  38270521 aattttgaggcactttcacaaca 38270543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 2891411 - 2891235
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgat-acaatatctatatttatagtaaaagaa 125  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||  |||||||||||||| ||||| |||||||||||||||||||||    
T  2891411 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatcttaaggtttacactgattacaatgtctatatttatagtaaaagaa 2891312  T
Q  126 tcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    |||||||||||||||||   ||||||||| |||| | |||||||||| |||||||||||||||||||||||||||||||||    
T  2891311 tcctcaataaaactgga---acaaatcta-gtcccataaatacgtttctgttttattttctgctgtcaaaatcggccaccg 2891235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 3937448 - 3937659
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||  |||| |||||| |||||||| |||||| ||  ||||||||||||||||||||||    
T  3937448 acaaactctagtttttttgttgcctttctaaacccttgtttcagctccctctatctcaaggtttactctgata-aaagtctatatttatagtaaaagaat 3937546  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccacc 226  Q
    ||| |||||||||||   || ||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||||||    || |||||||||    
T  3937547 cctaaataaaactgg---aaaaaatctaggcccg-aaaatacgtttctgttttatttcctgctgtcaaaatcggccaccgtgctgtagaattcggccacc 3937642  T
Q  227 gatttttgtggaaccaa 243  Q
    ||||||||  |||||||    
T  3937643 gatttttgctgaaccaa 3937659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 34 - 234
Target Start/End: Complemental strand, 6132959 - 6132764
Alignment:
Q  34 ctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcctcaat 133  Q
    |||||||||||||||||||||| || |||||||  ||   ||| |||||| | |||||||| |||||||| |||||||||||||||||||||||||||||    
T  6132959 ctagttttgttgttgcctttctgaacccttgttc-agcctcctctatctcaatgtttacaccgatacaatgtctatatttatagtaaaagaatcctcaat 6132861  T
Q  134 aaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccgtgctcaccaaatcggccaccgattttt 233  Q
    ||||||   | |||||||||||| |   ||||||||||||||||||||||| ||||||||||||||||||||     | |||||||||||||||||||||    
T  6132860 aaaact---agaacaaatctagg-catgaaaatacgtttatgttttattttatgctgtcaaaatcggccaccaaatgctccaaatcggccaccgattttt 6132765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 206
Target Start/End: Original strand, 18409586 - 18409759
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  | || ||||||   ||||||||||||||||  ||||||||||||||||||||||    
T  18409586 acaaaccctagttttgttgttgcctttctaaacccttgtttcagc-ctctctatctcattgtttacactgatacaaattctatatttatagtaaaagaat 18409684  T
Q  127 cctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtcaaaatcggccaccg 206  Q
    ||| || ||||||||   |||||||||||| ||| |||||| || | ||||||||||||| |||||||| | ||||||||    
T  18409685 cct-aaaaaaactgg---aacaaatctaggcccg-aaaatatgtgtctgttttattttctactgtcaaatttggccaccg 18409759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 47564588 - 47564497
Alignment:
Q  240 ccaacagacaaaaaatcagagttgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 331  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||  |||||||||||  ||||| |||||||||||||||||||||||||||    
T  47564588 ccaacagacaaaaaaccagagtgcaaaatcggccaccgattttctgcttccagaattctaatttcttcaattttgaggcactttcacaacaa 47564497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 12396084 - 12396185
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||||||||||||||||||||||| ||  || | |||||| ||||||||| | ||||||| ||||||||||||||||||| ||    
T  12396084 acaaaccctagttttgttgttgcctttctaaatccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaagcat 12396183  T
Q  127 cc 128  Q
    ||    
T  12396184 cc 12396185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 12401046 - 12401147
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||||||||||||||||||||||| ||  || | |||||| ||||||||| | ||||||| ||||||||||||||||||| ||    
T  12401046 acaaaccctagttttgttgttgcctttctaaatccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaagcat 12401145  T
Q  127 cc 128  Q
    ||    
T  12401146 cc 12401147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 24446833 - 24446919
Alignment:
Q  42 gttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaatcc 128  Q
    ||||||||||||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  24446833 gttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatcc 24446919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 6132715 - 6132646
Alignment:
Q  262 tgaaaatcggccaccgattttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 331  Q
    |||||||| |||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  6132715 tgaaaatcagccaccgattttcagcttccagaattccaatttcttcaattttgaggcactttcacaacaa 6132646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 19095976 - 19095875
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||| ||||||||||| | ||||||| |||||||| ||  |||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||    
T  19095976 acaaaccctaattttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcat 19095877  T
Q  127 cc 128  Q
    ||    
T  19095876 cc 19095875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 11435049 - 11434953
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  11435049 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 11434953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 51015340 - 51015244
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  51015340 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaagtctatatttatagtaaaag 51015244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 17662447 - 17662573
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactctagttttgttgttgcctttctaaatccttgttttagtaccctata----tctccaggtttacactg 96  Q
    |||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| |||||||| ||  |||| ||    |||| | |||| | |||    
T  17662447 caaaacctagtgtttgtttcaaagagacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctg 17662546  T
Q  97 atacaatatctatatttatagtaaaag 123  Q
    ||||||  |||||||||||||||||||    
T  17662547 atacaaggtctatatttatagtaaaag 17662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 38928417 - 38928518
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||||||||||||||  ||||||| ||  |||| |||||| |||||||| || ||||||   |||||||||||||||||||||    
T  38928417 acaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctctatctcaaggtttactctaatacaaagcctatatttatagtaaaagaat 38928516  T
Q  127 cc 128  Q
    ||    
T  38928517 cc 38928518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 41997586 - 41997485
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    ||||||||||||||||||||| ||||||| ||  ||||||| ||  |||| |||||| |||||||| |||||||||  ||||||||||||||| ||||||    
T  41997586 acaaactctagttttgttgtttcctttctgaacacttgtttcagccccctttatctcaaggtttactctgatacaaagtctatatttatagtagaagaat 41997487  T
Q  127 cc 128  Q
    ||    
T  41997486 cc 41997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 22044629 - 22044725
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||   ||||||||||||||||||    
T  22044629 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 22044725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 22801101 - 22801197
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  22801101 acaaactctagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22801197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 22802973 - 22803069
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  22802973 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22803069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 36378386 - 36378290
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  || | |||||| |||||||  |||||||||  |||||||||||||||||||    
T  36378386 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccgtctatctcaaggtttattctgatacaaagtctatatttatagtaaaag 36378290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 40637168 - 40637072
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | |||||||||  |||||||||||||| ||||    
T  40637168 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtgaaag 40637072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 47274821 - 47274725
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  47274821 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 47274725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 48486413 - 48486317
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  48486413 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 48486317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 36919825 - 36919922
Alignment:
Q  28 caaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatc--tccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||  |||||||||  || | |||||| |||||||||  |||||||||||||||||||    
T  36919825 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctatatctatcaaagtttactctgatacaaggtctatatttatagtaaaag 36919922  T

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Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 37313306 - 37313400
Alignment:
Q  28 caaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    ||||| ||| ||||||||||||||||||||| |||||||| ||  |||| |||||| ||||||||  |||||||| | |||||||||||||||||    
T  37313306 caaaccctaattttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactttgatacaaaacctatatttatagtaaaa 37313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 5198507 - 5198418
Alignment:
Q  34 ctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  5198507 ctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 5198418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 24888883 - 24888794
Alignment:
Q  34 ctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  24888883 ctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtaaaag 24888794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 33415726 - 33415827
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||||||||| |||||||||| |||||||| ||  |||| |||||| |||||||| |||||||||   |||||||| |||||||| |||    
T  33415726 acaaaccctagttttgttgttacctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttgtagtaaaaaaat 33415825  T
Q  127 cc 128  Q
    ||    
T  33415826 cc 33415827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 5101091 - 5100995
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| | ||||||| | |||||| ||| |||| |||||| |||||||| ||||| |||  |||||||||||||||||||    
T  5101091 acaaaccctagttttgttgttgtcattctaaacctttgtttcagtcccctctatctcaaggtttaccctgattcaaggtctatatttatagtaaaag 5100995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 9174385 - 9174481
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||  |||| |||||||| |||| |  ||||||||  |||||||||||||||||||    
T  9174385 acaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaaag 9174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 22046924 - 22047020
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||| |||| | | |||||||   ||||||||||||||||||    
T  22046924 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctccgatacaaggcctatatttatagtaaaag 22047020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 24879083 - 24878987
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| ||||||||| ||| |||| ||  |||| |||||||| |||||| | |||||||  |||||||||||||||||||    
T  24879083 acaaaccctagttttgttgttgtctttctaaaccctagtttcagccccctctatctccaagtttactcggatacaaggtctatatttatagtaaaag 24878987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 24880545 - 24880449
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| ||| ||||  |  |||| |||||||| |||||| | |||||||  |||||||||||||||||||    
T  24880545 acaaaccctagttttgttgttgcctttctaaaccctagtttacgccccctctatctccaagtttactccgatacaaggtctatatttatagtaaaag 24880449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 31849838 - 31849934
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||  |||| | ||||||||| | |||||||| |||||||||    
T  31849838 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcctagtttgctctgatacaagacctatatttctagtaaaag 31849934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 619687 - 619782
Alignment:
Q  28 caaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||| ||||||||||||||| |||| |||| |||||||| ||  |||| |||||| | |||||| |||||||||  |||||||||||||||||||    
T  619687 caaaccctagttttgttgttgtctttataaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 619782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 7941415 - 7941317
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  ||  |||| ||||| ||||| | |||||||||  |||||||||||||||||||    
T  7941415 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcccggtttgctctgatacaacgtctatatttatagtaaaag 7941317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 56030538 - 56030443
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaa 122  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||  || | |||||| |||||||| |||||||||   |||||||||||||||||    
T  56030538 acaaactctagttttgttgttgtcattctaaacccttgtttcagccccttctatctcaaggtttactctgatacaaagcctatatttatagtaaaa 56030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 9176713 - 9176807
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaa 121  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||  |||| |||||||| |||| |  ||||||||  |||||||||||||||||    
T  9176713 acaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaa 9176807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 40091661 - 40091750
Alignment:
Q  34 ctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||||||||||||| ||||||||| |||||||| ||  |||| |||||| | ||||||  ||||||||  |||||||||||||||||||    
T  40091661 ctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaag 40091750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 6764933 - 6764837
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  || | |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  6764933 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 6764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 14633413 - 14633318
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||||||||||||||||||||||||| | |||||| ||  || | |||||| | |||||| |||||||||  |||||||||||||| ||||    
T  14633413 acaaactctagttttgttgttgcctttctaaacctttgtttcag-cccttctatctcaaagtttactctgatacaaggtctatatttatagtgaaag 14633318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 16453403 - 16453307
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||  |||| ||||||  ||||| | |||||||||   |||||||||||| |||||    
T  16453403 acaaactctagttttgttgttgcctttttaaacccttgtttcagccccctctatctctcggtttgctctgatacaaagcctatatttatagcaaaag 16453307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 47868495 - 47868399
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||| ||| ||  | || |||||||| |||| | |||||||||  |||||||||||||| ||||    
T  47868495 acaaaccctagttttgttgttgcctttctaaacccttctttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtgaaag 47868399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 27499014 - 27498964
Alignment:
Q  281 ttcaacttccagaatttcaattttttcaattttgaggcactttcacaacaa 331  Q
    |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  27499014 ttcagcttccagaattccaatttcttcaattttgaggcactttcacaacaa 27498964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 31983837 - 31983937
Alignment:
Q  94 ctgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaacaaatctaggtccgaaaaatacgtttatgttttattttctgctgtca 193  Q
    |||||||||| |||||| ||||| |||||| |||||  | |||||||||||||   ||||| | || ||||||| |||||||||||||||||||||| ||    
T  31983837 ctgatacaatgtctataattataataaaagtatccttcaaaaaactggaacaa---atctaagccc-aaaaatatgtttatgttttattttctgctggca 31983932  T
Q  194 aaatc 198  Q
    |||||    
T  31983933 aaatc 31983937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 2485111 - 2485208
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccc-tatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||||||  ||| | || ||| | |||| | |||||||||  |||||||||||||| ||||    
T  2485111 acaaaccctagttttgttgttgcctttctaaacccttgttttagcccccttctagctcaaagtttgctctgatacaaggtctatatttatagtgaaag 2485208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 37089610 - 37089709
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctc---caggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  |||| ||||||   || |||||  |||||||||  |||||||||||||||||||    
T  37089610 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctctcaagtttagcctgatacaaggtctatatttatagtaaaag 37089709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 16934382 - 16934478
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||| |||||||| |||||| | ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  16934382 acaaaccctagttttgttgttgcttttctaaacccttgtatcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 16934478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 18847247 - 18847151
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| |   |||| |||||| | ||||    ||||||||  |||||||||||||||||||    
T  18847247 acaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccctctatctcaaagtttgttttgatacaaggtctatatttatagtaaaag 18847151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 44600077 - 44600173
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  | ||||||  |||||||||||||||||||    
T  44600077 acaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttaatacaaggtctatatttatagtaaaag 44600173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 15032776 - 15032894
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||| |||||| ||| ||||| |||||||| ||  |||| |||||| |||||||| ||| ||| |  ||||||||||||||||||| ||    
T  15032776 acaaaccctagttttcttgttgactt-ctaaacccttgtttcagccccctttatctcaaggtttactctggtaccaagtctatatttatagtaaaagtat 15032874  T
Q  127 cctcaataaaactggaacaa 146  Q
    ||   |||||| ||||||||    
T  15032875 ccctcataaaattggaacaa 15032894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 47210979 - 47211081
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctcc------aggtttacactgatacaatatctatatttatagtaa 120  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||||      | |||||  |||||||||  ||||||||||||||||    
T  47210979 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatttatagtaa 47211078  T
Q  121 aag 123  Q
    |||    
T  47211079 aag 47211081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 19322790 - 19322701
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatag 117  Q
    |||||| |||||||| |||||| ||| ||||| |||||||| |   |||| |||||| |||||||| ||||||||| ||||||||||||||    
T  19322790 acaaaccctagttttcttgttgactt-ctaaacccttgtttcatccccctctatctcaaggtttactctgatacaagatctatatttatag 19322701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 18537733 - 18537806
Alignment:
Q  51 tttctaaatccttgtttt-agtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||| ||||||||| ||  |||| |||||| | |||||| ||||||||| ||||||||||||||||||||    
T  18537733 tttctaaacccttgttttcagccccctctatctcaatgtttactctgatacaagatctatatttatagtaaaag 18537806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 36921733 - 36921830
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtacc-ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||  |||||||| |   || |||| |||| | |||||| |||||||||  ||||||||||| |||||||    
T  36921733 acaaaccctagttttgttgttgcctttctaagcccttgtttcaccccctctatctctcaaagtttactctgatacaaggtctatatttattgtaaaag 36921830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 8631658 - 8631698
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  8631658 acaaaccctagttttgttgttgcctttctaaacccttgttt 8631698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 11006476 - 11006516
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  11006476 acaaaccctagttttgttgttgcctttctaaacccttgttt 11006516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 11008805 - 11008845
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  11008805 acaaaccctagttttgttgttgcctttctaaacccttgttt 11008845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 16932028 - 16932124
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||||||||||| |||||||| |||||| | ||  |||| |||||| | |||| |  ||||||||  | |||||||||||||||||    
T  16932028 acaaaccctagttttgttgttgcttttctaaacccttgtatcagccccctctatctcaaagtttgctttgatacaaggtttatatttatagtaaaag 16932124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 18709402 - 18709442
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  18709402 acaaaccctagttttgttgttgcctttctaaacccttgttt 18709442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 22134854 - 22134894
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  22134854 acaaaccctagttttgttgttgcctttctaaacccttgttt 22134894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 27499108 - 27499076
Alignment:
Q  174 tgttttattttctgctgtcaaaatcggccaccg 206  Q
    |||||||||||||||||||||||||||||||||    
T  27499108 tgttttattttctgctgtcaaaatcggccaccg 27499076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 52942685 - 52942725
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  52942685 acaaaccctagttttgttgttgcctttctaaacccttgttt 52942725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 53405224 - 53405184
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  53405224 acaaaccctagttttgttgttgcctttctaaacccttgttt 53405184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 9148384 - 9148349
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  9148384 caaaccctagtgtttgttccaaagagacaaactcta 9148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 14787670 - 14787768
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  ||  |||| |||| | |||||   ||||||||  |||||||||||||||||||    
T  14787670 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaag 14787768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 26086178 - 26086213
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  26086178 caaaccctagtgtttgttccaaagagacaaactcta 26086213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 8756540 - 8756585
Alignment:
Q  78 tatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||| |||||||||  |||||||||||||||||||    
T  8756540 tatctcaaggtttactctgatacaaggtctatatttatagtaaaag 8756585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 330
Target Start/End: Complemental strand, 2891166 - 2891134
Alignment:
Q  298 caattttttcaattttgaggcactttcacaaca 330  Q
    |||||| ||||||||||||||||||||||||||    
T  2891166 caatttcttcaattttgaggcactttcacaaca 2891134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 5637704 - 5637744
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||||||||||||  |||||||    
T  5637704 acaaaccctagttttgttgttgcctttctaaactcttgttt 5637744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 12102138 - 12102086
Alignment:
Q  73 ccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaa 125  Q
    |||| |||||| ||||||   ||||||||| ||||||||||||||||||||||    
T  12102138 ccctctatctcaaggttttatctgatacaagatctatatttatagtaaaagaa 12102086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 18537989 - 18538029
Alignment:
Q  290 cagaatttcaattttttcaattttgaggcactttcacaaca 330  Q
    ||||| |||||||| |||||||||||| |||||||||||||    
T  18537989 cagaacttcaatttcttcaattttgagtcactttcacaaca 18538029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 22132629 - 22132669
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| | ||||||||||||||||||||||| ||||||||    
T  22132629 acaaacccaagttttgttgttgcctttctaaacccttgttt 22132669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 24348304 - 24348272
Alignment:
Q  35 tagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||||||||||||||||||||| ||||||||    
T  24348304 tagttttgttgttgcctttctaaacccttgttt 24348272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 35688 - 35580
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  || | |||| || |||||  ||||||||||| ||||||||||||||||||||||    
T  35688 acaaaccctagttttgttgttgcctttctaaacccttgtttcagcgcc-tctatcacccggtttgtactgatacaatgtctatatttatagtaaaagaat 35590  T
Q  127 cctcaataaa 136  Q
    ||||||||||    
T  35589 cctcaataaa 35580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 79908 - 79807
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||| |||||| ||||||||| |||||||| ||  |||| |||||| |||||||||||||||||| | |||||||||||||||||||||    
T  79908 acaaaccctagttttattgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaaaactatatttatagtaaaagaat 79809  T
Q  127 cc 128  Q
    ||    
T  79808 cc 79807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 79234 - 79140
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaa 121  Q
    |||||| ||||||||||||||||||||||||| |||||||||||  |||| |||||| || ||||| ||||| |||  |||||||||||||||||    
T  79234 acaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctcaagttttactctgattcaaggtctatatttatagtaaa 79140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 4046 - 3950
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||||  |||||||||  |||||||||||||||||||    
T  4046 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 3950  T

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Target: scaffold0250 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 2929 - 2833
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  2929 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaagttctatatttatagtaaaag 2833  T

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Target: scaffold0154 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 11712 - 11808
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||| | |||||||||| ||||| ||  |||| ||||||||||||||| ||||| |||  |||||||||||||||||||    
T  11712 acaaaccctagttttgttgttgtcattctaaatccctgtttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 11808  T

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Target: scaffold0131 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 15066 - 14972
Alignment:
Q  29 aaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||| ||||||||||||||||||||||||||| |||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||||||||    
T  15066 aaaccctagttttgttgttgcctttctaaatcattgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 14972  T

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Target: scaffold0038 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 41722 - 41818
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  |||| |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  41722 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaag 41818  T

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Target: scaffold0038; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 41685 - 41720
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  41685 caaaccctagtgtttgttccaaagagacaaactcta 41720  T

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Target: scaffold0552 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 1070 - 1166
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  || | |||||| | |||| | |||||||||  |||||||||||||| ||||    
T  1070 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 1166  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 183879 - 183974
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||||||||||||||||||||||||||||| | |||||| ||  || | |||||| | |||||| |||||||||  |||||||||||||| ||||    
T  183879 acaaactctagttttgttgttgcctttctaaacctttgtttcag-cccttctatctcaaagtttactctgatacaaggtctatatttatagtgaaag 183974  T

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Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 52060 - 51962
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtacc--ctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| ||||||||||||||||| ||||||| |||||||| ||  ||  |||| |||| | |||||   ||||||||  |||||||||||||||||||    
T  52060 acaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaag 51962  T

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Target: scaffold0472 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 6248 - 6152
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaag 123  Q
    |||||| |||||||| ||||||| |||||||| |||||||| ||  |||| |||||| | |||| |  ||||||||  |||||||||||||||||||    
T  6248 acaaaccctagttttattgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 6152  T

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Target: scaffold0511 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 2091 - 2036
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatct 82  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||  ||||||||||    
T  2091 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctatatct 2036  T

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Target: scaffold0224 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 16058 - 16158
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttttagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaat 126  Q
    |||||| |||||||| |||||| ||| ||||| |||| ||| |   |||| |||||  |||||||| ||||||||| |||||||||||||||||||| ||    
T  16058 acaaaccctagttttcttgttgactt-ctaaacccttatttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagtat 16156  T
Q  127 cc 128  Q
    ||    
T  16157 cc 16158  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000003; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 69530 - 69570
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  69530 acaaaccctagttttgttgttgcctttctaaacccttgttt 69570  T

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Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 69493 - 69528
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  69493 caaaccctagtgtttgttccaaagagacaaactcta 69528  T

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Target: scaffold0025; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 73225 - 73260
Alignment:
Q  1 caaaccctagtgtttgttccaaagggacaaactcta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  73225 caaaccctagtgtttgttccaaagagacaaactcta 73260  T

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Target: scaffold0025; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 73262 - 73302
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||| |||||||||||||||||||| ||||||||    
T  73262 acaaaccctagatttgttgttgcctttctaaacccttgttt 73302  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 85279 - 85179
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt-tagtaccctatatctccaggtttacactgatacaatatctatatttatagtaaaagaa 125  Q
    |||||| ||||||||||||||| |||| ||||||||||||| |  |  | | |||||| ||||||||  ||||||||   ||||||||||||||||||||    
T  85279 acaaaccctagttttgttgttgtctttttaaatccttgtttctcct--cttctatctcaaggtttactttgatacaaagcctatatttatagtaaaagaa 85182  T
Q  126 tcc 128  Q
    |||    
T  85181 tcc 85179  T

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Target: scaffold0267 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 90 - 50
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||| |||||||| ||||||||    
T  90 acaaaccctagttttgttgttgcttttctaaacccttgttt 50  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 29220 - 29180
Alignment:
Q  27 acaaactctagttttgttgttgcctttctaaatccttgttt 67  Q
    |||||| |||||||||||||||||||| |||| ||||||||    
T  29220 acaaaccctagttttgttgttgcctttttaaacccttgttt 29180  T

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