View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16743_high_11 (Length: 313)
Name: NF16743_high_11
Description: NF16743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16743_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 20 - 295
Target Start/End: Complemental strand, 20934097 - 20933822
Alignment:
| Q |
20 |
tactgcttatgtggggtggaaaacactgaacttttgggtcaataagaaagagaaaagaaaggtcaatggcctcccaataaagacgaaaaagtttgtagtt |
119 |
Q |
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| T |
20934097 |
tactgcttatgtggggtggaaaacactgaacttttgggtcaataagaaagagaaaagaaaggtcaatggcctcccaataaagacgaaaaagtttgtagtt |
20933998 |
T |
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| Q |
120 |
cttgctatcaaagaaaataataaggacatagagatagtatcttcattggtagatgttcaaatagagattttctccatggaaggtattgtaagtggttcca |
219 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20933997 |
cttgctatcaaagaaaataataaggaaatagagatagtatcttcattggtagatgttcaaatagagattttctccatggaaggtattgtaagtggttcca |
20933898 |
T |
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| Q |
220 |
atgcttgttttgaaagaccgtttgatgtagccaatgagaaacacatggttgttatggttgctgcatatggactttg |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20933897 |
atgcttgttttgaaagaccgtttgatgtagccaatgagaaacacatggttgttatggttgctgcatatggactttg |
20933822 |
T |
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