View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16743_high_12 (Length: 301)
Name: NF16743_high_12
Description: NF16743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16743_high_12 |
 | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0017 (1 HSPs) |
| | |
|
| [»] scaffold0061 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 10028388 - 10028664
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaaatgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatgn |
109 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10028388 |
catagggcgaatatgtgaacttggacaaaatacatggatatccacaaatgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatga |
10028487 |
T |
|
| Q |
110 |
nnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgaga |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10028488 |
aaaaaa-tatgctaagaagaaaagtgtttcaataaaataaaagagagattttagagaagaatttcaaaattgaattctgaatgacgtgaaaatgttgaga |
10028586 |
T |
|
| Q |
210 |
ctcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaat |
287 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10028587 |
ctcacaaacaatatttatagaaaaaaagaagcaagtaaattgcatcaattttccccttaatttagtaatgaaattaat |
10028664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 11 - 286
Target Start/End: Complemental strand, 38348744 - 38348467
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38348744 |
catagggcgaatatgtgaatttggacaaaatacatggatatccacaacatttagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
38348645 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38348644 |
aaaaaaaatatgctaagaagaaaagtgtttcaataaaatataagagagatttcagagaagaatttcaaaattgaattctgaatgacgtgaaaatgttgag |
38348545 |
T |
|
| Q |
209 |
actcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaa |
286 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
38348544 |
actcacaaataatatttatagaaaaaaagaagcaagtaaattgcatcaattttgcccttaatttagtaatgaaattaa |
38348467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 286
Target Start/End: Original strand, 20787884 - 20788161
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||| |||||| |||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20787884 |
catagggtgaatatatgaatttggacaaaatacatggatatccacaacatttagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
20787983 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
20787984 |
aaaaaaaatatgctaagaagaaaagtgtttcaataaaatataagagagatttcagagaagaattttaaaattgaattctgaatgacgtgaaaatgttgag |
20788083 |
T |
|
| Q |
209 |
actcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaa |
286 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20788084 |
actcacaaacaatatttatagaaaaaaagaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaa |
20788161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 286
Target Start/End: Original strand, 58293 - 58570
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
58293 |
catagggcgaatatgtgaatttggacaaaatacatggatatccacaacatttagtggattgatatcataaattgaatcagcttttgaaattagagtgatg |
58392 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
58393 |
aaaaaaaatatgctaagaagaaaagtgtttcaataaaatataagagagatttcagagaagaatttcaaaattgaattctgaatgacgtgaaaatgttgag |
58492 |
T |
|
| Q |
209 |
actcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaa |
286 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
58493 |
actcacgaacaatatttatagaaaaaaagaagcaagtaaattgcatcaattttgcccttaatttagtaatgaaattaa |
58570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 286
Target Start/End: Complemental strand, 27429070 - 27428793
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
27429070 |
catagggcgaatatgtgaatttggacaaaatacatggatatccacaacatttagtggattgatatcataaattgaatcagcttttgaaattagagtgatg |
27428971 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
27428970 |
aaaaaaaatatgctaagaagaaaagtgtttcaataaaatataagagagatttcagagaagaatttcaaaattgaattctgaatgacgtgaaaatgttgag |
27428871 |
T |
|
| Q |
209 |
actcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaa |
286 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
27428870 |
actcacgaacaatatttatagaaaaaaagaagcaagtaaattgcatcaattttgcccttaatttagtaatgaaattaa |
27428793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 12515399 - 12515120
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||||||||||||| | ||||||||| ||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12515399 |
catagggcgaatatgtgtatttggacaaaatacatggatatccacaacatttaatggattgatatcataaattgaatcaatttttggaattagagtgatg |
12515300 |
T |
|
| Q |
109 |
nnnnnnnn-tatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttga |
207 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
12515299 |
aaaaaaaaatatgctacgaagaaaagtgtttcaataaaataaaagagagatttcatagaagaatttcaaaattgaattctgaatgacgtgaaaatattga |
12515200 |
T |
|
| Q |
208 |
gactcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaat |
287 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
12515199 |
gactcacaaacaatatttatagaaaaaaagaagcaagtaaattgcatcaattttgcccttaatttagtaatgaaattaat |
12515120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 286
Target Start/End: Complemental strand, 17990502 - 17990225
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17990502 |
catagggcgaatatgtgaatttggacaaaatacatggatatccacaacatttagtggattgatatcataaattgaatcagcttttgaaattagagtgatg |
17990403 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
17990402 |
aaaaaaaatatgctaagaagaaaagtgtttcaataaaatataagagagatttcagagaagaatttcaaaattgaattctgaatgacgtgaaaatgttgag |
17990303 |
T |
|
| Q |
209 |
actcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaa |
286 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17990302 |
actcacgaacaatatttatagaaaaaaagaagcaagtaaattgcatcaattttgcccttaatttagtaatgaaattaa |
17990225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 286
Target Start/End: Original strand, 18072487 - 18072764
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
18072487 |
catagggcgaatatgtgaatttggacaaaatacatggatatccacaacatttagtggattgatatcataaattgaatcagcttttgaaattagagtgatg |
18072586 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18072587 |
aaaaaaaatatgctaagaagaaaagtgtttcaataaaatataagagagatttcagagaagaatttcaaaattgaattctgaatgacgtgaaaatgttgag |
18072686 |
T |
|
| Q |
209 |
actcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaa |
286 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
18072687 |
actcacgaacaatatttatagaaaaaaagaagcaagtaaattgcatcaattttgcccttaatttagtaatgaaattaa |
18072764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 11 - 286
Target Start/End: Complemental strand, 42614815 - 42614538
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42614815 |
catagggcgaatatgtgaatttggacaaaatacatggatatccacaacatttagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
42614716 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
42614715 |
aaaaaaaatatgctaagaagaaaagtgtttcaataaaatataagagagattttagagaagaatttcaaaattgaattctgaatgacgtgaaaatgttgag |
42614616 |
T |
|
| Q |
209 |
actcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaa |
286 |
Q |
| |
|
|| | |||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||| ||||| |
|
|
| T |
42614615 |
acccgcaaacaatatttatagaaaaaaagaagcaagtaaattgcattaattttgcccttaatttagtaatgatattaa |
42614538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 11 - 286
Target Start/End: Complemental strand, 40700523 - 40700246
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
40700523 |
catagggcgaatatgtgaatttggacaaaatacatggatatccacaacatttagtggattgatatcataaattgaatcaatttttgaaattaaagtgatg |
40700424 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
40700423 |
aaaaaaaatatgctaagaagaaaagtgtttcaataaaatataagagagattttagagaagaatttcaaaattgaattctgaatgacgtgaaaatgttgag |
40700324 |
T |
|
| Q |
209 |
actcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaa |
286 |
Q |
| |
|
|| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||| |
|
|
| T |
40700323 |
acccgcaaacaatatttatagaaaaaaagaagcaagtaaattgcatcaattttgcccttaatttaataatgatattaa |
40700246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 163545 - 163823
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
|||||| | |||||||| | ||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
163545 |
cataggacaaatatgtgtatttggacaaaatacatggatatccacaacatttagtggattgatatcataaattgaattaatttttaaaattagagtgatg |
163644 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
163645 |
aaaaaaaatatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgatttctgaatgacgtgaaaatgttgag |
163744 |
T |
|
| Q |
209 |
actcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaat |
287 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||| ||||||||| |||||| ||||| |||||||||||| |
|
|
| T |
163745 |
actcacaaacaatatttataaaaaaaaagaagtaagtaaattgtatcaattttgcccttattttaggaatgaaattaat |
163823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 35234 - 34957
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
|||||| | |||||||| | ||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
35234 |
cataggacaaatatgtgtatttggacaaaatacatggatatccacaacatttagtggattgatatcataaattgaattaatttttaaaattagagtgatg |
35135 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgaattctgaatgatgtgaaaatgttgag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
35134 |
aaaaaaaatatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaattgatttctgaatgacgtgaaaatgttgag |
35035 |
T |
|
| Q |
209 |
actcacaaacaatatttatagnnnnnnngaagcaagtaaattgcatcaatttttcccttaatttagtaatgaaattaat |
287 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||| ||||||||| |||||| ||||| |||||||||||| |
|
|
| T |
35034 |
actcacaaacaatatttata-aaaaaaagaagtaagtaaattgtatcaattttgcccttattttaggaatgaaattaat |
34957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 12164777 - 12165002
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||| ||||||||||| ||| ||||| ||||||||||| |||| |||||||||| | ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12164777 |
catagggtgaatatgtgaatttgaacaaaatacatggatatatacaacatgtagtggagtaatatcataaattgaatcaattttcgaaattagagtgatg |
12164876 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaatt-------gaattctgaatgatgtgaaaa |
201 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
12164877 |
-aaaaaaatatgttaagaagaaaagtgtttcaataaaataaaagagagattt-tgagaagaattttaaaattttcgtaagaattctgaatgatgtgaaaa |
12164974 |
T |
|
| Q |
202 |
tgttgagactcacaaacaatatttatag |
229 |
Q |
| |
|
|||||||||| |||||| |||||||||| |
|
|
| T |
12164975 |
tgttgagactgacaaactatatttatag |
12165002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 12409205 - 12409430
Alignment:
| Q |
11 |
catagggcgaatatgtgaacttggacaaa-tacatggatatccacaa-atgtagtggattgatatcataaattgaatcaatttttgaaattagagtgatg |
108 |
Q |
| |
|
||||||| ||||||||||| ||| ||||| ||||||||||| |||| |||||||||| | ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12409205 |
catagggtgaatatgtgaatttgaacaaaatacatggatatatacaacatgtagtggagtaatatcataaattgaatcaattttcgaaattagagtgatg |
12409304 |
T |
|
| Q |
109 |
nnnnnnnntatgctaagaagaaaagtgtttcaataaaataaaagagagatttcagagaagaatttcaaaatt-------gaattctgaatgatgtgaaaa |
201 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
12409305 |
-aaaaaaatatgttaagaagaaaagtgtttcaataaaataaaagagagattt-tgagaagaattttaaaattttcgtaagaattctgaatgatgtgaaaa |
12409402 |
T |
|
| Q |
202 |
tgttgagactcacaaacaatatttatag |
229 |
Q |
| |
|
|||||||||| |||||| |||||||||| |
|
|
| T |
12409403 |
tgttgagactgacaaactatatttatag |
12409430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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