View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16743_low_1 (Length: 808)

Name: NF16743_low_1
Description: NF16743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16743_low_1
NF16743_low_1
[»] chr5 (90 HSPs)
chr5 (481-794)||(6897979-6898305)
chr5 (126-237)||(4094953-4095064)
chr5 (124-237)||(23189066-23189179)
chr5 (127-237)||(16730018-16730128)
chr5 (124-237)||(25684358-25684471)
chr5 (125-237)||(31236588-31236700)
chr5 (119-226)||(10453586-10453693)
chr5 (330-453)||(13795525-13795649)
chr5 (123-237)||(42534391-42534505)
chr5 (129-237)||(8068323-8068431)
chr5 (124-237)||(15726220-15726333)
chr5 (129-237)||(32063529-32063637)
chr5 (125-237)||(43411517-43411629)
chr5 (126-237)||(28769947-28770058)
chr5 (123-237)||(9530657-9530771)
chr5 (132-224)||(22798074-22798166)
chr5 (125-237)||(39540719-39540831)
chr5 (126-237)||(3882126-3882237)
chr5 (124-237)||(13588863-13588976)
chr5 (124-237)||(40340723-40340836)
chr5 (123-237)||(41631513-41631627)
chr5 (341-453)||(4617978-4618091)
chr5 (330-452)||(13090942-13091065)
chr5 (123-237)||(22279215-22279329)
chr5 (125-237)||(10688688-10688800)
chr5 (330-453)||(28332148-28332272)
chr5 (330-452)||(9589237-9589360)
chr5 (139-237)||(37313853-37313951)
chr5 (125-226)||(2148127-2148227)
chr5 (330-450)||(12362613-12362734)
chr5 (330-453)||(2318681-2318805)
chr5 (330-453)||(21051559-21051683)
chr5 (332-451)||(41802135-41802255)
chr5 (330-453)||(37431603-37431731)
chr5 (335-481)||(2029352-2029499)
chr5 (341-453)||(2141269-2141382)
chr5 (335-450)||(3056415-3056531)
chr5 (341-453)||(13410569-13410681)
chr5 (354-453)||(27116489-27116589)
chr5 (335-453)||(1661954-1662073)
chr5 (341-480)||(6532579-6532719)
chr5 (330-452)||(14967260-14967383)
chr5 (120-226)||(19126219-19126324)
chr5 (335-453)||(24097898-24098017)
chr5 (330-448)||(36880818-36880937)
chr5 (341-453)||(2413954-2414064)
chr5 (341-453)||(9534897-9535007)
chr5 (335-453)||(42917144-42917264)
chr5 (335-483)||(21605645-21605794)
chr5 (341-481)||(43237619-43237760)
chr5 (335-453)||(6114034-6114153)
chr5 (226-267)||(4094874-4094915)
chr5 (226-267)||(10453496-10453537)
chr5 (226-267)||(25684279-25684320)
chr5 (226-267)||(31236738-31236779)
chr5 (128-237)||(33001470-33001579)
chr5 (226-267)||(42534543-42534584)
chr5 (398-453)||(6560853-6560908)
chr5 (335-450)||(32467073-32467189)
chr5 (226-264)||(8068469-8068507)
chr5 (226-264)||(16729942-16729980)
chr5 (335-453)||(18228719-18228838)
chr5 (123-237)||(32624471-32624585)
chr5 (330-453)||(35682124-35682244)
chr5 (123-237)||(37962992-37963106)
chr5 (226-264)||(39540869-39540907)
chr5 (226-264)||(40340647-40340685)
chr5 (400-449)||(3425403-3425452)
chr5 (226-267)||(15726161-15726202)
chr5 (226-267)||(23189217-23189258)
chr5 (226-267)||(28770096-28770137)
chr5 (330-450)||(29743925-29744047)
chr5 (226-267)||(32624392-32624433)
chr5 (226-267)||(43411666-43411707)
chr5 (399-480)||(34302646-34302727)
chr5 (395-453)||(35817669-35817727)
chr5 (226-264)||(41631437-41631475)
chr5 (226-267)||(34859584-34859625)
chr5 (226-267)||(37963144-37963185)
chr5 (226-264)||(2148276-2148314)
chr5 (226-264)||(19126132-19126170)
chr5 (226-264)||(32063675-32063713)
chr5 (226-264)||(37313989-37314027)
chr5 (226-267)||(9530578-9530619)
chr5 (226-267)||(10688609-10688650)
chr5 (226-267)||(11758824-11758865)
chr5 (226-267)||(13589014-13589055)
chr5 (226-267)||(22798217-22798258)
chr5 (226-267)||(33001597-33001638)
chr5 (396-453)||(38355038-38355095)
[»] chr6 (43 HSPs)
chr6 (3-124)||(2145722-2145843)
chr6 (126-237)||(32518748-32518859)
chr6 (124-237)||(35224828-35224941)
chr6 (125-225)||(29638734-29638834)
chr6 (124-237)||(1339149-1339262)
chr6 (125-237)||(18871218-18871330)
chr6 (125-226)||(34969738-34969839)
chr6 (142-226)||(6015821-6015905)
chr6 (125-237)||(33954747-33954859)
chr6 (123-237)||(34315122-34315236)
chr6 (330-483)||(11446733-11446887)
chr6 (125-237)||(26811053-26811165)
chr6 (333-448)||(17010393-17010509)
chr6 (124-237)||(9226496-9226609)
chr6 (335-453)||(17545632-17545750)
chr6 (335-480)||(32834034-32834180)
chr6 (123-222)||(24025744-24025843)
chr6 (330-453)||(30020613-30020737)
chr6 (167-237)||(16989154-16989224)
chr6 (335-450)||(13390415-13390531)
chr6 (335-453)||(26358813-26358932)
chr6 (395-453)||(6265255-6265313)
chr6 (335-482)||(6848508-6848656)
chr6 (395-453)||(8376345-8376403)
chr6 (335-453)||(24487547-24487666)
chr6 (226-267)||(1339070-1339111)
chr6 (226-267)||(6015954-6015995)
chr6 (335-453)||(8401677-8401795)
chr6 (226-267)||(18871139-18871180)
chr6 (226-267)||(33954667-33954708)
chr6 (226-267)||(35224979-35225020)
chr6 (341-453)||(34196075-34196188)
chr6 (395-453)||(15383525-15383583)
chr6 (335-453)||(24212939-24213057)
chr6 (226-267)||(26810993-26811034)
chr6 (226-267)||(29638884-29638925)
chr6 (226-267)||(34969668-34969709)
chr6 (398-453)||(2258930-2258985)
chr6 (226-264)||(16989262-16989300)
chr6 (398-448)||(1096253-1096303)
chr6 (199-237)||(27719078-27719116)
chr6 (226-267)||(9226417-9226458)
chr6 (226-267)||(34315274-34315315)
[»] chr4 (77 HSPs)
chr4 (123-237)||(27967805-27967919)
chr4 (125-237)||(36569943-36570055)
chr4 (119-237)||(10778985-10779103)
chr4 (125-237)||(44998705-44998817)
chr4 (330-453)||(56361568-56361692)
chr4 (123-237)||(38955040-38955154)
chr4 (127-237)||(24292273-24292383)
chr4 (128-237)||(46630648-46630757)
chr4 (124-237)||(48549663-48549776)
chr4 (121-237)||(2526466-2526582)
chr4 (126-237)||(21515284-21515395)
chr4 (125-237)||(42244537-42244649)
chr4 (330-452)||(36091087-36091209)
chr4 (125-237)||(16004533-16004645)
chr4 (125-237)||(46221993-46222104)
chr4 (341-453)||(29646651-29646764)
chr4 (125-237)||(33612818-33612930)
chr4 (125-237)||(46633623-46633735)
chr4 (128-237)||(45629404-45629513)
chr4 (333-449)||(39162063-39162180)
chr4 (125-226)||(54499880-54499981)
chr4 (125-237)||(52257427-52257539)
chr4 (124-223)||(23639235-23639334)
chr4 (330-453)||(47302423-47302547)
chr4 (332-453)||(46216029-46216151)
chr4 (341-452)||(9858272-9858384)
chr4 (330-452)||(31908471-31908594)
chr4 (335-453)||(46041728-46041847)
chr4 (335-480)||(51436073-51436220)
chr4 (335-453)||(41759920-41760040)
chr4 (330-453)||(1414357-1414478)
chr4 (335-484)||(30342821-30342970)
chr4 (341-453)||(48579176-48579288)
chr4 (335-453)||(27538942-27539061)
chr4 (335-484)||(28037681-28037832)
chr4 (335-453)||(37855148-37855267)
chr4 (335-453)||(52589098-52589217)
chr4 (341-450)||(30539599-30539709)
chr4 (335-453)||(52809205-52809323)
chr4 (341-453)||(46004590-46004703)
chr4 (330-453)||(53695652-53695776)
chr4 (335-453)||(14802739-14802858)
chr4 (395-449)||(31681368-31681422)
chr4 (335-453)||(34280489-34280608)
chr4 (226-267)||(10779141-10779182)
chr4 (226-267)||(16004683-16004724)
chr4 (226-267)||(24292194-24292235)
chr4 (226-267)||(27967726-27967767)
chr4 (226-267)||(38955192-38955233)
chr4 (226-267)||(44998626-44998667)
chr4 (226-267)||(46222142-46222183)
chr4 (341-453)||(3716352-3716465)
chr4 (226-264)||(21515208-21515246)
chr4 (226-267)||(2526387-2526428)
chr4 (226-267)||(36569864-36569905)
chr4 (396-453)||(36592357-36592414)
chr4 (226-267)||(42244687-42244728)
chr4 (226-267)||(45629324-45629365)
chr4 (226-267)||(48549816-48549857)
chr4 (398-450)||(43137689-43137741)
chr4 (146-237)||(42680619-42680710)
chr4 (411-452)||(18425455-18425496)
chr4 (226-267)||(23639385-23639426)
chr4 (122-227)||(27636045-27636150)
chr4 (226-267)||(46633753-46633794)
chr4 (226-267)||(55129918-55129959)
chr4 (342-483)||(37519231-37519373)
chr4 (342-483)||(37523447-37523589)
chr4 (330-453)||(38975302-38975427)
chr4 (226-266)||(42680748-42680788)
chr4 (335-453)||(53389106-53389226)
chr4 (400-488)||(38835844-38835932)
chr4 (341-387)||(30891401-30891447)
chr4 (341-387)||(33076247-33076293)
chr4 (341-387)||(52591898-52591944)
chr4 (226-267)||(33612739-33612780)
chr4 (226-267)||(46630795-46630836)
[»] chr3 (93 HSPs)
chr3 (123-237)||(44500133-44500247)
chr3 (124-237)||(36019415-36019528)
chr3 (125-237)||(51235816-51235928)
chr3 (122-237)||(14460479-14460594)
chr3 (126-237)||(35352191-35352302)
chr3 (124-237)||(52782158-52782271)
chr3 (125-237)||(49950924-49951036)
chr3 (124-237)||(32720281-32720394)
chr3 (125-237)||(44962899-44963011)
chr3 (125-237)||(48925411-48925523)
chr3 (125-237)||(33830825-33830937)
chr3 (125-237)||(37567513-37567625)
chr3 (125-237)||(53376886-53376997)
chr3 (128-226)||(53186310-53186408)
chr3 (124-237)||(50465767-50465880)
chr3 (125-237)||(35320360-35320472)
chr3 (123-226)||(48388757-48388860)
chr3 (125-237)||(9322429-9322542)
chr3 (120-237)||(45927515-45927632)
chr3 (124-237)||(346985-347098)
chr3 (124-237)||(7157037-7157150)
chr3 (124-237)||(54009201-54009314)
chr3 (131-226)||(55365380-55365475)
chr3 (336-480)||(11140247-11140391)
chr3 (354-449)||(3136301-3136397)
chr3 (130-237)||(48990589-48990696)
chr3 (330-387)||(788726-788783)
chr3 (341-449)||(29629252-29629358)
chr3 (335-480)||(29786857-29787003)
chr3 (333-449)||(43715006-43715123)
chr3 (330-483)||(53516836-53516990)
chr3 (167-237)||(2667779-2667849)
chr3 (395-453)||(4663459-4663517)
chr3 (330-453)||(7671830-7671952)
chr3 (128-226)||(50560364-50560462)
chr3 (124-237)||(26409629-26409742)
chr3 (336-453)||(27647505-27647623)
chr3 (341-453)||(40650094-40650207)
chr3 (335-484)||(44670518-44670668)
chr3 (335-450)||(876482-876598)
chr3 (330-453)||(19547516-19547640)
chr3 (330-453)||(21289068-21289192)
chr3 (336-480)||(42067579-42067724)
chr3 (341-453)||(45636116-45636228)
chr3 (395-453)||(25592327-25592385)
chr3 (335-453)||(29347520-29347639)
chr3 (335-453)||(35171453-35171572)
chr3 (330-444)||(52082277-52082392)
chr3 (341-453)||(45518665-45518778)
chr3 (135-237)||(1326897-1326999)
chr3 (341-480)||(42364193-42364333)
chr3 (124-237)||(882019-882132)
chr3 (226-267)||(14460397-14460438)
chr3 (226-267)||(36019566-36019607)
chr3 (335-453)||(42848466-42848587)
chr3 (335-450)||(44365651-44365770)
chr3 (226-267)||(44500265-44500306)
chr3 (226-267)||(44962819-44962860)
chr3 (226-267)||(48925561-48925602)
chr3 (226-267)||(51235737-51235778)
chr3 (226-267)||(52782309-52782350)
chr3 (226-267)||(53186220-53186261)
chr3 (341-453)||(32717680-32717793)
chr3 (341-453)||(38785348-38785461)
chr3 (398-453)||(27082670-27082725)
chr3 (226-264)||(53376810-53376848)
chr3 (226-263)||(9322580-9322617)
chr3 (226-267)||(32720201-32720242)
chr3 (226-267)||(35352340-35352381)
chr3 (226-267)||(37567434-37567475)
chr3 (226-267)||(49951074-49951115)
chr3 (226-267)||(50465688-50465729)
chr3 (226-267)||(50560511-50560552)
chr3 (399-480)||(31308877-31308958)
chr3 (335-450)||(47948654-47948771)
chr3 (335-453)||(39630150-39630270)
chr3 (341-387)||(4659850-4659896)
chr3 (226-264)||(33830749-33830787)
chr3 (226-267)||(346906-346947)
chr3 (226-263)||(881944-881981)
chr3 (226-267)||(7347306-7347347)
chr3 (226-267)||(35320510-35320551)
chr3 (226-267)||(55365524-55365565)
chr3 (335-387)||(378985-379037)
chr3 (185-237)||(7347385-7347437)
chr3 (228-267)||(26409782-26409821)
chr3 (410-453)||(27079715-27079758)
chr3 (226-264)||(2667703-2667741)
chr3 (124-162)||(2667995-2668033)
chr3 (395-453)||(26885292-26885350)
chr3 (226-264)||(48388909-48388947)
chr3 (226-267)||(7157188-7157229)
chr3 (226-267)||(45927436-45927477)
[»] chr8 (77 HSPs)
chr8 (124-237)||(21835725-21835839)
chr8 (120-237)||(14913839-14913956)
chr8 (125-237)||(36835637-36835749)
chr8 (126-237)||(35037758-35037869)
chr8 (126-237)||(38971759-38971870)
chr8 (126-237)||(39002857-39002968)
chr8 (127-237)||(7223778-7223888)
chr8 (125-237)||(43182724-43182836)
chr8 (126-237)||(38627282-38627393)
chr8 (122-237)||(28896902-28897015)
chr8 (123-226)||(37766300-37766403)
chr8 (330-453)||(39347385-39347509)
chr8 (127-237)||(464545-464655)
chr8 (125-226)||(196066-196167)
chr8 (125-226)||(310903-311004)
chr8 (138-237)||(45401443-45401542)
chr8 (127-237)||(12266073-12266183)
chr8 (125-237)||(1426327-1426439)
chr8 (333-483)||(529264-529415)
chr8 (124-237)||(45393445-45393558)
chr8 (330-453)||(16323586-16323710)
chr8 (330-453)||(43049564-43049687)
chr8 (330-452)||(17642102-17642225)
chr8 (341-450)||(37465714-37465824)
chr8 (334-452)||(2273038-2273157)
chr8 (341-453)||(42444484-42444597)
chr8 (330-453)||(26439778-26439902)
chr8 (335-453)||(10280587-10280706)
chr8 (341-481)||(28090191-28090331)
chr8 (395-453)||(43485362-43485420)
chr8 (332-453)||(4475072-4475194)
chr8 (335-480)||(29773445-29773591)
chr8 (336-480)||(37511088-37511233)
chr8 (335-450)||(38502214-38502330)
chr8 (122-237)||(38803729-38803844)
chr8 (335-453)||(14498563-14498682)
chr8 (335-453)||(36002383-36002502)
chr8 (124-237)||(3053094-3053207)
chr8 (335-480)||(23286565-23286711)
chr8 (335-484)||(34332108-34332258)
chr8 (122-237)||(29039610-29039725)
chr8 (335-480)||(29229438-29229583)
chr8 (330-453)||(36886417-36886541)
chr8 (226-267)||(7223699-7223740)
chr8 (226-267)||(14913994-14914035)
chr8 (226-267)||(28897053-28897094)
chr8 (226-267)||(35037679-35037720)
chr8 (226-267)||(37766452-37766493)
chr8 (226-267)||(38627203-38627244)
chr8 (226-267)||(38971680-38971721)
chr8 (226-267)||(39002778-39002819)
chr8 (360-453)||(946003-946096)
chr8 (125-237)||(18844159-18844271)
chr8 (354-453)||(43921152-43921252)
chr8 (399-453)||(6800097-6800151)
chr8 (395-453)||(19718672-19718730)
chr8 (335-453)||(37161531-37161650)
chr8 (226-267)||(21835646-21835687)
chr8 (226-267)||(27100961-27101002)
chr8 (226-267)||(43182874-43182915)
chr8 (226-267)||(45393596-45393637)
chr8 (226-267)||(45401364-45401405)
chr8 (341-453)||(15726156-15726269)
chr8 (335-483)||(44934896-44935045)
chr8 (226-264)||(464468-464506)
chr8 (335-427)||(29459686-29459780)
chr8 (330-423)||(2731848-2731942)
chr8 (400-449)||(13483222-13483271)
chr8 (226-267)||(38803650-38803691)
chr8 (129-237)||(27100815-27100923)
chr8 (399-453)||(23274649-23274703)
chr8 (330-380)||(39029498-39029548)
chr8 (226-267)||(196216-196256)
chr8 (226-267)||(311053-311093)
chr8 (226-267)||(3053015-3053056)
chr8 (335-380)||(23274724-23274769)
chr8 (226-267)||(29039763-29039803)
[»] chr7 (68 HSPs)
chr7 (125-237)||(18922871-18922983)
chr7 (124-237)||(9923365-9923478)
chr7 (124-237)||(42039597-42039710)
chr7 (124-237)||(45196803-45196916)
chr7 (332-481)||(18990090-18990240)
chr7 (122-237)||(3062188-3062303)
chr7 (126-237)||(25867200-25867311)
chr7 (119-237)||(24505418-24505536)
chr7 (125-237)||(1282480-1282592)
chr7 (124-237)||(32186422-32186535)
chr7 (124-237)||(41715138-41715251)
chr7 (123-237)||(47220250-47220362)
chr7 (336-449)||(30317226-30317340)
chr7 (124-237)||(39444260-39444373)
chr7 (129-237)||(40946977-40947085)
chr7 (123-237)||(17335032-17335146)
chr7 (330-452)||(45857729-45857852)
chr7 (128-237)||(42902389-42902498)
chr7 (122-237)||(2038092-2038207)
chr7 (331-483)||(44964077-44964230)
chr7 (125-226)||(15090974-15091074)
chr7 (335-453)||(41913355-41913473)
chr7 (330-453)||(43750102-43750226)
chr7 (124-190)||(9915500-9915566)
chr7 (330-452)||(30936347-30936470)
chr7 (331-453)||(31482401-31482524)
chr7 (335-481)||(3909927-3910074)
chr7 (332-453)||(20439072-20439194)
chr7 (131-224)||(47068968-47069060)
chr7 (341-453)||(38129651-38129764)
chr7 (332-447)||(11486029-11486145)
chr7 (335-450)||(30862819-30862935)
chr7 (330-453)||(41809229-41809352)
chr7 (330-452)||(42974923-42975046)
chr7 (330-453)||(43069107-43069230)
chr7 (335-453)||(1691252-1691370)
chr7 (335-453)||(40941902-40942022)
chr7 (345-481)||(27956376-27956513)
chr7 (341-453)||(30623987-30624102)
chr7 (127-237)||(7574116-7574226)
chr7 (335-453)||(41381524-41381643)
chr7 (330-448)||(46836839-46836958)
chr7 (226-267)||(9923286-9923327)
chr7 (226-267)||(18922792-18922833)
chr7 (226-267)||(24505339-24505380)
chr7 (226-267)||(42039518-42039559)
chr7 (226-267)||(47220171-47220212)
chr7 (398-453)||(28326708-28326763)
chr7 (148-223)||(33704505-33704580)
chr7 (335-450)||(42710961-42711077)
chr7 (226-267)||(39444181-39444222)
chr7 (226-267)||(41715291-41715332)
chr7 (404-448)||(8770695-8770739)
chr7 (335-450)||(21699552-21699665)
chr7 (131-194)||(27426767-27426830)
chr7 (398-453)||(41331756-41331811)
chr7 (226-267)||(3062109-3062150)
chr7 (226-267)||(15090884-15090925)
chr7 (226-267)||(25867121-25867162)
chr7 (226-267)||(27130693-27130734)
chr7 (226-267)||(32186575-32186616)
chr7 (226-267)||(40947123-40947164)
chr7 (396-443)||(34118517-34118565)
chr7 (330-453)||(47748055-47748181)
chr7 (226-264)||(7574264-7574302)
chr7 (226-267)||(2038245-2038286)
chr7 (226-267)||(42902536-42902577)
chr7 (125-226)||(44963823-44963923)
[»] chr2 (84 HSPs)
chr2 (120-237)||(19635930-19636047)
chr2 (120-237)||(19834523-19834640)
chr2 (124-237)||(16814850-16814963)
chr2 (124-237)||(16854130-16854243)
chr2 (124-237)||(37725846-37725959)
chr2 (124-237)||(40533546-40533659)
chr2 (125-237)||(2316838-2316950)
chr2 (121-237)||(5084835-5084951)
chr2 (125-237)||(18576300-18576412)
chr2 (126-237)||(28394363-28394474)
chr2 (124-237)||(13568211-13568324)
chr2 (125-237)||(3723941-3724053)
chr2 (125-237)||(36947482-36947594)
chr2 (123-237)||(10711571-10711685)
chr2 (127-237)||(21836580-21836690)
chr2 (123-237)||(35292806-35292920)
chr2 (122-237)||(7504019-7504134)
chr2 (330-451)||(40370494-40370616)
chr2 (124-237)||(6657740-6657853)
chr2 (125-237)||(36049464-36049576)
chr2 (123-237)||(36191968-36192082)
chr2 (123-237)||(39878917-39879031)
chr2 (128-237)||(45555677-45555786)
chr2 (330-450)||(6438430-6438551)
chr2 (126-226)||(18008956-18009055)
chr2 (335-483)||(5091994-5092142)
chr2 (341-484)||(12547360-12547504)
chr2 (330-480)||(6513519-6513670)
chr2 (332-444)||(7467163-7467276)
chr2 (134-226)||(33423741-33423833)
chr2 (341-453)||(36489385-36489498)
chr2 (354-453)||(5420254-5420354)
chr2 (341-453)||(34438451-34438565)
chr2 (125-237)||(1860222-1860334)
chr2 (335-453)||(11813456-11813576)
chr2 (330-450)||(20212409-20212529)
chr2 (330-453)||(11598142-11598266)
chr2 (335-453)||(4673862-4673981)
chr2 (335-453)||(5389461-5389580)
chr2 (335-453)||(6884186-6884305)
chr2 (335-453)||(34665598-34665717)
chr2 (124-237)||(41839949-41840062)
chr2 (125-237)||(26738327-26738439)
chr2 (330-453)||(37909406-37909530)
chr2 (335-453)||(11227654-11227773)
chr2 (395-453)||(19636419-19636477)
chr2 (395-453)||(19835012-19835070)
chr2 (341-453)||(3383454-3383566)
chr2 (341-448)||(14533088-14533196)
chr2 (335-450)||(42427831-42427947)
chr2 (330-380)||(32499247-32499297)
chr2 (335-453)||(38963324-38963443)
chr2 (226-267)||(2316988-2317029)
chr2 (226-267)||(5084989-5085030)
chr2 (226-267)||(13568362-13568403)
chr2 (226-267)||(19635851-19635892)
chr2 (226-267)||(19834444-19834485)
chr2 (226-267)||(36192120-36192161)
chr2 (226-267)||(36947632-36947673)
chr2 (226-267)||(37725767-37725808)
chr2 (226-267)||(40533467-40533508)
chr2 (226-264)||(16815001-16815039)
chr2 (226-264)||(16854281-16854319)
chr2 (226-267)||(3724091-3724132)
chr2 (226-267)||(10711493-10711534)
chr2 (226-267)||(18009104-18009145)
chr2 (335-453)||(33423274-33423395)
chr2 (226-267)||(35292726-35292767)
chr2 (354-450)||(37083238-37083335)
chr2 (398-453)||(58947-59002)
chr2 (413-481)||(32499149-32499217)
chr2 (341-383)||(43690286-43690328)
chr2 (226-267)||(14820109-14820150)
chr2 (226-267)||(18576450-18576491)
chr2 (124-237)||(21425504-21425617)
chr2 (226-267)||(33423882-33423923)
chr2 (226-267)||(36049614-36049655)
chr2 (123-216)||(44068328-44068421)
chr2 (226-267)||(45555598-45555639)
chr2 (335-387)||(1353600-1353652)
chr2 (341-387)||(3810728-3810774)
chr2 (226-267)||(1860143-1860184)
chr2 (226-267)||(21425426-21425466)
chr2 (226-267)||(28394284-28394325)
[»] chr1 (123 HSPs)
chr1 (124-237)||(47860754-47860867)
chr1 (124-228)||(10061461-10061565)
chr1 (126-237)||(31570972-31571083)
chr1 (123-237)||(3150183-3150297)
chr1 (119-237)||(49289223-49289341)
chr1 (124-237)||(33828863-33828976)
chr1 (124-237)||(33838990-33839103)
chr1 (124-237)||(39853254-39853367)
chr1 (124-237)||(40850316-40850429)
chr1 (125-237)||(2684263-2684375)
chr1 (125-237)||(9259816-9259928)
chr1 (124-228)||(14131351-14131455)
chr1 (124-228)||(14191198-14191302)
chr1 (125-237)||(43224645-43224757)
chr1 (131-237)||(17376650-17376756)
chr1 (123-237)||(41321300-41321414)
chr1 (120-226)||(44647240-44647346)
chr1 (128-237)||(27038838-27038947)
chr1 (125-237)||(37765253-37765365)
chr1 (124-226)||(29171471-29171573)
chr1 (124-237)||(5057494-5057607)
chr1 (124-237)||(48868061-48868174)
chr1 (123-224)||(52273717-52273818)
chr1 (125-237)||(7426660-7426772)
chr1 (125-229)||(8085948-8086052)
chr1 (125-237)||(48481144-48481256)
chr1 (127-237)||(9222856-9222966)
chr1 (131-237)||(27802107-27802213)
chr1 (124-237)||(1658548-1658661)
chr1 (122-226)||(10635242-10635346)
chr1 (330-453)||(52260840-52260964)
chr1 (125-226)||(50502344-50502445)
chr1 (330-443)||(51978112-51978225)
chr1 (333-449)||(35910193-35910310)
chr1 (330-453)||(11778891-11779015)
chr1 (341-484)||(2247063-2247207)
chr1 (330-452)||(50239489-50239612)
chr1 (330-491)||(632903-633065)
chr1 (126-222)||(31015889-31015984)
chr1 (330-453)||(27352874-27352998)
chr1 (396-453)||(9166900-9166957)
chr1 (354-446)||(2620680-2620773)
chr1 (330-483)||(48616703-48616856)
chr1 (330-483)||(7121954-7122107)
chr1 (330-453)||(26011197-26011321)
chr1 (330-453)||(36274972-36275096)
chr1 (341-453)||(51519809-51519920)
chr1 (335-453)||(37498771-37498889)
chr1 (396-453)||(42317147-42317204)
chr1 (335-484)||(5956787-5956937)
chr1 (341-449)||(28791634-28791743)
chr1 (341-453)||(39190823-39190936)
chr1 (332-451)||(23304436-23304556)
chr1 (330-453)||(33906346-33906470)
chr1 (335-450)||(45423639-45423755)
chr1 (167-237)||(24247844-24247914)
chr1 (335-453)||(38262394-38262513)
chr1 (335-453)||(39971529-39971648)
chr1 (341-480)||(16482576-16482715)
chr1 (401-453)||(33098982-33099034)
chr1 (341-453)||(8461793-8461905)
chr1 (335-480)||(41073270-41073415)
chr1 (126-237)||(41550148-41550259)
chr1 (335-453)||(31930958-31931077)
chr1 (398-480)||(922166-922248)
chr1 (226-267)||(3150335-3150376)
chr1 (226-267)||(7426810-7426851)
chr1 (226-267)||(10061373-10061414)
chr1 (330-423)||(10179128-10179222)
chr1 (226-267)||(14191106-14191147)
chr1 (398-480)||(27295058-27295140)
chr1 (124-237)||(33234053-33234166)
chr1 (226-267)||(33829014-33829055)
chr1 (226-267)||(33838911-33838952)
chr1 (226-267)||(39853173-39853214)
chr1 (226-267)||(43224795-43224836)
chr1 (226-267)||(44647395-44647436)
chr1 (226-267)||(49289379-49289420)
chr1 (330-453)||(51184069-51184193)
chr1 (340-453)||(51781369-51781483)
chr1 (226-267)||(52079659-52079700)
chr1 (335-443)||(29106624-29106733)
chr1 (335-480)||(35305151-35305297)
chr1 (330-450)||(47719228-47719348)
chr1 (341-453)||(50905608-50905721)
chr1 (125-188)||(52079776-52079839)
chr1 (226-264)||(27038762-27038800)
chr1 (226-264)||(31571121-31571159)
chr1 (226-264)||(52273869-52273907)
chr1 (335-453)||(52303040-52303159)
chr1 (167-237)||(8569023-8569089)
chr1 (226-267)||(8569126-8569167)
chr1 (226-267)||(9259966-9260007)
chr1 (226-267)||(24247952-24247993)
chr1 (226-267)||(27802026-27802067)
chr1 (124-205)||(29207585-29207666)
chr1 (226-267)||(41321221-41321262)
chr1 (125-237)||(20280516-20280628)
chr1 (355-480)||(28493810-28493936)
chr1 (341-453)||(46770998-46771111)
chr1 (341-453)||(51984961-51985074)
chr1 (398-453)||(18641915-18641970)
chr1 (395-450)||(26102794-26102849)
chr1 (226-264)||(17376574-17376612)
chr1 (226-264)||(37765403-37765441)
chr1 (398-448)||(44246322-44246372)
chr1 (226-267)||(9223004-9223045)
chr1 (226-267)||(14131504-14131545)
chr1 (226-267)||(20280437-20280478)
chr1 (124-237)||(33771645-33771758)
chr1 (226-267)||(48868212-48868253)
chr1 (398-450)||(23056795-23056847)
chr1 (335-387)||(23459816-23459868)
chr1 (226-266)||(28094908-28094948)
chr1 (226-266)||(29171382-29171422)
chr1 (226-262)||(33771796-33771832)
chr1 (335-387)||(45673409-45673461)
chr1 (226-266)||(50502494-50502534)
chr1 (226-264)||(33234204-33234242)
chr1 (401-480)||(34256453-34256532)
chr1 (226-267)||(5057415-5057456)
chr1 (226-267)||(48481065-48481106)
chr1 (226-267)||(49739346-49739387)
[»] scaffold0493 (2 HSPs)
scaffold0493 (125-237)||(1682-1794)
scaffold0493 (226-267)||(1602-1643)
[»] scaffold0005 (3 HSPs)
scaffold0005 (128-237)||(291918-292027)
scaffold0005 (335-453)||(36869-36988)
scaffold0005 (226-267)||(291839-291880)
[»] scaffold0625 (1 HSPs)
scaffold0625 (332-481)||(6520-6670)
[»] scaffold0022 (2 HSPs)
scaffold0022 (123-237)||(166417-166531)
scaffold0022 (226-262)||(166569-166605)
[»] scaffold0239 (2 HSPs)
scaffold0239 (124-237)||(15676-15789)
scaffold0239 (226-267)||(15597-15638)
[»] scaffold0604 (1 HSPs)
scaffold0604 (330-453)||(2047-2171)
[»] scaffold0113 (1 HSPs)
scaffold0113 (330-453)||(29272-29396)
[»] scaffold0121 (1 HSPs)
scaffold0121 (124-237)||(13898-14011)
[»] scaffold0194 (2 HSPs)
scaffold0194 (168-227)||(17540-17599)
scaffold0194 (226-267)||(17647-17688)
[»] scaffold0077 (1 HSPs)
scaffold0077 (335-453)||(48037-48156)
[»] scaffold0349 (2 HSPs)
scaffold0349 (199-237)||(8500-8538)
scaffold0349 (199-237)||(15095-15133)


Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 90)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 481 - 794
Target Start/End: Original strand, 6897979 - 6898305
Alignment:
Q  481 ataagatttatccttttgttagtatttgcatttgcataccccgttagcttaacttagttggtaaagaca------------tgcaaagtctgaggttcaa 568  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |            ||||||||||||| |||||    
T  6897979 ataagatttatccttttgttagtatttgcatttgcataccccgtgagcttaacttagttggtaaagataatgcataatatatgcaaagtctgagcttcaa 6898078  T
Q  569 atctcggacaccaagaaaa-aagtatttgcatttgcatgaataatcaatgacattgagtttgcatttgataatagacaggaatacatttgttggtatttg 667  Q
    | | | ||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6898079 aaccctgacacaaataaaaaaagtatttgcatttgcatgaataattaatgacattgagtttgcatttgataatagacaggaatacatttgttggtatttg 6898178  T
Q  668 catgttgggtgatgttattgtgatttacgaatcctgacaaacatatagtttgtttataggatttgagttgcattcaatcacaaccacatgactgcacata 767  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6898179 catgttgggtgatgttattgtgatttacgaatcctgacaaacatgtagtttgtttataggatttgagttgcattcaatcacaaccacgtgactgcacata 6898278  T
Q  768 gtcggtcacatctagactgtccgatct 794  Q
    |||  ||||||||||||||||||||||    
T  6898279 gtctatcacatctagactgtccgatct 6898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 4095064 - 4094953
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4095064 ggaacttctatggtacactcacaattttgagtgtaccagtactcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaatgtatttg 4094965  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  4094964 tcaatatttata 4094953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 23189066 - 23189179
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  23189066 agggaacttctatggtacactcacaattttgagtgtaccagtactattgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 23189165  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  23189166 tgtcaatatttata 23189179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 16730128 - 16730018
Alignment:
Q  127 gaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  16730128 gaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgt 16730029  T
Q  227 cattgtttata 237  Q
    || | ||||||    
T  16730028 caatatttata 16730018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 25684471 - 25684358
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  25684471 agggaacttctatggtacactcataattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 25684372  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  25684371 tgtcaatatttata 25684358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 31236588 - 31236700
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||| ||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  31236588 gggaatttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 31236687  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  31236688 gtcaatatttata 31236700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 10453693 - 10453586
Alignment:
Q  119 taaatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaag 218  Q
    |||||||||||||||||||||||||||||||||||||||||| |  | || |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  10453693 taaatagggaacttctatggtacactcacaattttgagtgtatcggtacttttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaag 10453594  T
Q  219 gtatttgt 226  Q
    ||||||||    
T  10453593 gtatttgt 10453586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 13795525 - 13795649
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaata-nnnnnnncttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  13795525 tcgtcgacgtttttggtaaatgatatttaattattataattataggtgatataaaatattttttctcttcaaaaaataacacatttaactattaatttat 13795624  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| ||||||||||| |||||||    
T  13795625 tgattaggtgtaccaatgcactcaa 13795649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 42534391 - 42534505
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||||||||||||||||||||||||||||||||||||||| || || |||||||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  42534391 tagggaacttctatggtacactcacaattttgagtgtaccgatacttttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaagtat 42534490  T
Q  223 ttgtcattgtttata 237  Q
    || ||| | ||||||    
T  42534491 ttatcaatatttata 42534505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 8068323 - 8068431
Alignment:
Q  129 acttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtca 228  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  8068323 acttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtca 8068422  T
Q  229 ttgtttata 237  Q
     | ||||||    
T  8068423 atatttata 8068431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 15726333 - 15726220
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||| ||||||||| ||||| |||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  15726333 agggaacttttatggtacattcacatttttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 15726234  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  15726233 tgtcaatatttata 15726220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 32063529 - 32063637
Alignment:
Q  129 acttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtca 228  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||  || ||||||||||||||||||||||||||||||    
T  32063529 acttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaccgatcactttaatgaaataaaaaggtatttgtca 32063628  T
Q  229 ttgtttata 237  Q
     | ||||||    
T  32063629 atatttata 32063637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 43411517 - 43411629
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||||||| |||||||||||||||||  | ||||||||||||||| |||||||||||| || ||||||||| ||||||||||||||||    
T  43411517 gggaacttctatggtacactaacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaataaaataaaaaggtattt 43411616  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  43411617 gtcaatatttata 43411629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 28769947 - 28770058
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||||||||||||||||||||||| ||||  | ||||||||||||||| | |||||||||| || |||||||||||||||||||||||||||    
T  28769947 ggaacttctatggtacactcacaattttgagtataccggtactcttgtttcacaaaatttataaattaacgatcactttaatgaaataaaaaggtatttg 28770046  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  28770047 tcaatatttata 28770058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 9530771 - 9530657
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||||||||||||| ||||||||||||||||||  | |||||||| |||||||| |||||||||| || ||||||||||||||||||| ||||    
T  9530771 tagggaacttctatggtacacccacaattttgagtgtaccggtactcttgttgcacaaattttataaattaacgatcactttaatgaaataaaaatgtat 9530672  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  9530671 ttgtcaatatttata 9530657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 22798074 - 22798166
Alignment:
Q  132 tctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  22798074 tctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtattt 22798166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 39540719 - 39540831
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  |  |||||||||| ||| ||||||||||||||| ||||||||| ||||||||| ||||||    
T  39540719 gggaacttctatggtacactcacaattttgagtgtaccgttattcttgtttcataaaatatataaattaaagatcactttaataaaataaaaatgtattt 39540818  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  39540819 gtcaatatttata 39540831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 3882237 - 3882126
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||| |||| ||||||||||||||||| |  | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  3882237 ggaacttctatgatacattcacaattttgagtgtatcggtactcttgtttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatttg 3882138  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  3882137 tcaatatttata 3882126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 13588863 - 13588976
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||| ||||||||||||||||||  | || ||||| |||||| | |||||||||| || |||||||||||||||||||||||||    
T  13588863 agggaacttctatggtacacccacaattttgagtgtaccggtacttttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaggtatt 13588962  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  13588963 tgtcaatatttata 13588976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 40340836 - 40340723
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||| |||||||||||||||||||||||||| ||  | ||||||||||| ||| |||||||||||||||  |||||||||||||||||| |||||    
T  40340836 agggaacttttatggtacactcacaattttgagtgtcccggtactcttgtttcataaaatatataaattaaagattactttaatgaaataaaaatgtatt 40340737  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  40340736 tgtcaatatttata 40340723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 41631627 - 41631513
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||||||||||||||||||||| | ||||||||||||||   | ||||||||||||||| ||||||||||||||| |||||||| ||||||||||  |||    
T  41631627 tagggaacttctatggtacacttataattttgagtgtactggtactcttgtttcacaaaatatataaattaaagatcactttaacgaaataaaaatatat 41631528  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  41631527 ttgtcaatatttata 41631513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 4617978 - 4618091
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||| ||||| | ||||||||||||||||||||||||||| ||||||        ||||||||||||||| ||||||||||||||||||| |||||||||    
T  4617978 tttgataaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataacatatttaactattaatttattgatttggtgt 4618077  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  4618078 accaatacactcaa 4618091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 330 - 452
Target Start/End: Complemental strand, 13091065 - 13090942
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | ||||||||||||||||||||||||||| |||| |        |||||||||||||||||||||||||||||||||     
T  13091065 tcgtcgatgtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttaa 13090966  T
Q  429 tcatttggtgtaccaatacactca 452  Q
    | ||||||||||||||||||||||    
T  13090965 taatttggtgtaccaatacactca 13090942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 22279215 - 22279329
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||| | ||||||| ||||||||||||||||||  | |||||||| |||||| | |||||||||| || ||||||||||||||||||| ||||    
T  22279215 tagggaacttcaacggtacacccacaattttgagtgtaccggtactcttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaagtat 22279314  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  22279315 ttgtcaatttttata 22279329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 10688800 - 10688688
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||| |||||||| |||||| | |||| |  | ||||||||| ||||| |||||||||||| |||||||||||| ||||||||||||||||    
T  10688800 gggaacttctatgatacactcataattttaaatgtatcggtactcttgttttacaaaatatataaattaacgaccactttaataaaataaaaaggtattt 10688701  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  10688700 gtcaatatttata 10688688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 28332272 - 28332148
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||| ||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  28332272 tcgtagacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 28332173  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | |||||||||||||||||||||||    
T  28332172 tgatttggtgtaccaatacactcaa 28332148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 330 - 452
Target Start/End: Complemental strand, 9589360 - 9589237
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | ||||||||||||||||||||||||||| ||||||        ||||||||||||||| |||||||||||||||||     
T  9589360 tcgtcgatgtttttgataaataagatttaattattataattataggtgatagaaaataatttttttcttcaaaaaataacatatttaactattaatttaa 9589261  T
Q  429 tcatttggtgtaccaatacactca 452  Q
    | ||||||||| ||||||||||||    
T  9589260 tgatttggtgtgccaatacactca 9589237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 37313853 - 37313951
Alignment:
Q  139 tacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    |||||||||||||||||||||||   | ||||||||||||||| ||||| ||||||||| ||||||||| ||||||||| |||||||||| | ||||||    
T  37313853 tacactcacaattttgagtgtactggtactcttgtttcacaaaatatatgaattaaagatcactttaataaaataaaaaagtatttgtcaatatttata 37313951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 2148127 - 2148227
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||| ||||||    | ||||||||||||||| | || ||||||| || ||||||||||||||||||||||||||    
T  2148127 gggaacttctatggtacactcacaattttaagtgtaatggtactcttgtttcacaaaattta-aaattaacgatcactttaatgaaataaaaaggtattt 2148225  T
Q  225 gt 226  Q
    ||    
T  2148226 gt 2148227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 330 - 450
Target Start/End: Original strand, 12362613 - 12362734
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        ||||||||||||| ||||||||||||||||||||    
T  12362613 tcgtcgacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataagacatttaactattaatttat 12362712  T
Q  429 tcatttggtgtaccaatacact 450  Q
    | ||| ||||||||||||||||    
T  12362713 tgattgggtgtaccaatacact 12362734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 2318681 - 2318805
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||| ||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  2318681 tcgtcgacgtttttggttaataagatttaattagtataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 2318780  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| |||||||||||||||||||    
T  2318781 tgattgggtgtaccaatacactcaa 2318805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 21051559 - 21051683
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||| | ||||| |||| | |||||||||||||| | || |        ||||||||||||||||||||||||||||||||||    
T  21051559 tcgtcgacgtttttggtaaataagatttagttatcacaattataggtgatagacaacaatttttctcttcaaaaaataacacatttaactattaatttat 21051658  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | |||||||||||||||||| ||||    
T  21051659 tgatttggtgtaccaatacattcaa 21051683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 332 - 451
Target Start/End: Complemental strand, 41802255 - 41802135
Alignment:
Q  332 gtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattc 430  Q
    |||||| | |||| ||||| | ||||||||||||||||||||| ||||| ||||||        ||||||||||||||| ||||||||||||||||| |     
T  41802255 gtcgacatttttgataaataagatttaattattataattatagatgatagaaaataatttttctcttcaaaaaataacatatttaactattaatttaatg 41802156  T
Q  431 atttggtgtaccaatacactc 451  Q
    |||||||||||||||||||||    
T  41802155 atttggtgtaccaatacactc 41802135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 37431603 - 37431731
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnct--tcaaaaaataacacatttaactattaattt- 426  Q
    |||||||||| |||||||||| | |||||||||||||||| |||||||| | |||| |       ||  ||||||||||||||||||||||||||||||     
T  37431603 tcgtcgacgtttttggtaaataagatttaattattataatcataggtgaaagaaaacaattttttctcttcaaaaaataacacatttaactattaattta 37431702  T
Q  427 --attcatttggtgtaccaatacactcaa 453  Q
      ||| |||||||||||||||||||||||    
T  37431703 taattgatttggtgtaccaatacactcaa 37431731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 2029499 - 2029352
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  2029499 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatt 2029400  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcca 481  Q
    ||||||||||||||||| ||       | |||||||||||||||||||    
T  2029399 tggtgtaccaatacacttaaattgttagatgtaccatggaatttgcca 2029352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 2141382 - 2141269
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||    
T  2141382 tttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaagaatttggtgt 2141283  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  2141282 accaatacactcaa 2141269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 3056531 - 3056415
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  3056531 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaaaatt 3056432  T
Q  434 tggtgtaccaatacact 450  Q
    |||||||||||||||||    
T  3056431 tggtgtaccaatacact 3056415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 13410681 - 13410569
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    ||||||| || | ||||| ||||||||||||||||||||  ||||||       || ||||||||||| ||||||||||||||||||   ||||||||||    
T  13410681 tttggtagataagatttagttattataattataggtgatggaaaatattttttcctacaaaaaataactcatttaactattaatttaagaatttggtgta 13410582  T
Q  441 ccaatacactcaa 453  Q
    |||||||||||||    
T  13410581 ccaatacactcaa 13410569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 27116589 - 27116489
Alignment:
Q  354 atttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactca 452  Q
    ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  27116589 atttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactca 27116490  T
Q  453 a 453  Q
    |    
T  27116489 a 27116489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 1661954 - 1662073
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  1661954 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataacccatttaactattaatttaaggatt 1662053  T
Q  434 tggtgtaccaatacactcaa 453  Q
    | ||||||||||||||||||    
T  1662054 ttgtgtaccaatacactcaa 1662073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 341 - 480
Target Start/End: Complemental strand, 6532719 - 6532579
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||    
T  6532719 tttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaagaatttggtgt 6532620  T
Q  440 accaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    ||||||||||| ||       |||||||||| |||||||||    
T  6532619 accaatacacttaaattgttgggtgtaccatagaatttgcc 6532579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 452
Target Start/End: Complemental strand, 14967383 - 14967260
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | ||||||||||||||||||||||||||| |||| |        ||| ||||||||||||||||||||| |||||||     
T  14967383 tcgtcgatgtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctctttaaaaaataacacatttaactactaatttaa 14967284  T
Q  429 tcatttggtgtaccaatacactca 452  Q
    | |||| |||||||||||||||||    
T  14967283 tgatttagtgtaccaatacactca 14967260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 19126324 - 19126219
Alignment:
Q  120 aaatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaagg 219  Q
    ||||| ||||||||||||||||||||| |||||| |||||| |  | ||||||||||| ||| | || ||||||| || ||||||||||||||||||||     
T  19126324 aaataaggaacttctatggtacactcataattttaagtgtaacggtactcttgtttcataaaattta-aaattaacgatcactttaatgaaataaaaaga 19126226  T
Q  220 tatttgt 226  Q
    |||||||    
T  19126225 tatttgt 19126219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 24098017 - 24097898
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| |||| ||||||||||||| | |||    
T  24098017 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcattgaactattaatttaataatt 24097918  T
Q  434 tggtgtaccaatacactcaa 453  Q
    |||||||||| |||||||||    
T  24097917 tggtgtaccattacactcaa 24097898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 448
Target Start/End: Complemental strand, 36880937 - 36880818
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | |||||||| ||||| |||||||||||  ||||||        |||||||||||||||||||||||||||||||| |    
T  36880937 tcgtcgacgtttttggttaataagatttaatttttatagttataggtgatggaaaataatttttctcttcaaaaaataacacatttaactattaatttgt 36880838  T
Q  429 tcatttggtgtaccaataca 448  Q
    | ||| ||||||||||||||    
T  36880837 tgattgggtgtaccaataca 36880818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 2414064 - 2413954
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       | |  ||||||||| ||||||||||||||||||   ||||||||||    
T  2414064 tttggtaaataagatttagttattataattataggtgatagaaaataattttttcct--aaaaataactcatttaactattaatttaagaatttggtgta 2413967  T
Q  441 ccaatacactcaa 453  Q
    |||||||||||||    
T  2413966 ccaatacactcaa 2413954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 9535007 - 9534897
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       | |  ||||||||| ||||||||||||||||||   ||||||||||    
T  9535007 tttggtaaataagatttagttattataattataggtgatagaaaataattttttcct--aaaaataactcatttaactattaatttaagaatttggtgta 9534910  T
Q  441 ccaatacactcaa 453  Q
    |||||||||||||    
T  9534909 ccaatacactcaa 9534897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 42917264 - 42917144
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn--cttcaaaaaataacacatttaactattaatttattcat 432  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||         || |||||| |||| ||||||||||||||||||   ||    
T  42917264 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatatttttttctacaaaaagtaactcatttaactattaatttaagaat 42917165  T
Q  433 ttggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||||    
T  42917164 ttggtgtaccaatacactcaa 42917144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 483
Target Start/End: Complemental strand, 21605794 - 21605645
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttc-aaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||  ||||||       | |  |||||||||| ||||||||||||||||||   |||    
T  21605794 gacgtttttggtaaataagatttagttattataattataggtgatggaaaatatttttttcctataaaaaataactcatttaactattaatttaaagatt 21605695  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
    ||||||||||||||||||||       |||||||||| ||||||| ||||    
T  21605694 tggtgtaccaatacactcaaattgttgggtgtaccatagaatttgtcata 21605645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 341 - 481
Target Start/End: Original strand, 43237619 - 43237760
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||| ||| | ||||| |||||||||| |||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||    
T  43237619 tttggtgaataagatttagttattataatcataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagaatttggtgt 43237718  T
Q  440 accaatacactcaannnnnnnggtgtaccatggaatttgcca 481  Q
    ||||||||||||||       |||||||||| ||||||||||    
T  43237719 accaatacactcaaattattgggtgtaccatagaatttgcca 43237760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 6114034 - 6114153
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||  ||||||        || ||||||||||| ||||||||||||||||||   |||    
T  6114034 gacgtttttggtaaataagatttagttattataattataggtgatggaaaatattttttttctacaaaaaataactcatttaactattaatttaaggatt 6114133  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||| ||||||||||||||    
T  6114134 tggtggaccaatacactcaa 6114153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 4094915 - 4094874
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4094915 tcattgtttataaggatcatattacaaaatttacattttgtc 4094874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 10453537 - 10453496
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10453537 tcattgtttataaggatcatattacaaaatttacattttgtc 10453496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 25684320 - 25684279
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25684320 tcattgtttataaggatcatattacaaaatttacattttgtc 25684279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 31236738 - 31236779
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  31236738 tcattgtttataaggatcatattacaaaatttacattttgtc 31236779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 33001470 - 33001579
Alignment:
Q  128 aacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtc 227  Q
    |||||||||||||||  || |||||| | ||||||  | || ||||| |||||| | |||||||||| || || ||||||||||||||||||||||||||    
T  33001470 aacttctatggtacatccataattttaaatgtaccggtacttttgttgcacaaaatttataaattaacgatcagtttaatgaaataaaaaggtatttgtc 33001569  T
Q  228 attgtttata 237  Q
    | | ||||||    
T  33001570 aatatttata 33001579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 42534543 - 42534584
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42534543 tcattgtttataaggatcatattacaaaatttacattttgtc 42534584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 6560908 - 6560853
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||||||||||||    
T  6560908 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaa 6560853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 32467189 - 32467073
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||| |       || ||||||||||  |||| ||||||||||||| | |||    
T  32467189 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataattcattgaactattaatttaatgatt 32467090  T
Q  434 tggtgtaccaatacact 450  Q
    || ||||||||||||||    
T  32467089 tgatgtaccaatacact 32467073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 8068469 - 8068507
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8068469 tcattgtttataaggatcatattacaaaatttacatttt 8068507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 16729980 - 16729942
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16729980 tcattgtttataaggatcatattacaaaatttacatttt 16729942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 18228719 - 18228838
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| |||||||||||| |||||||| ||||||       |   ||||||||||| ||||||||||||||||||   |||    
T  18228719 gacgtttttggtaaataagatttagttattataattacaggtgatagaaaataattttttcccacaaaaaataactcatttaactattaatttaaggatt 18228818  T
Q  434 tggtgtaccaatacactcaa 453  Q
    |||| |||||||||||||||    
T  18228819 tggtataccaatacactcaa 18228838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 32624585 - 32624471
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||||| |||| ||||| || ||| ||||||||  | |||||||||||||||   |||||||||| || || ||| || |||||||||| |||    
T  32624585 tagggaacttctacggtatactcagaaattttagtgtaccggtactcttgtttcacaaaacttataaattaacgatcatttttataaaataaaaagttat 32624486  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  32624485 ttgtcaatatttata 32624471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 35682244 - 35682124
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttatt 429  Q
    |||||||||| |||||||||| | ||||| ||||||||||||||||||||||||  |         |||||||| |||| |||||||| |||||||||      
T  35682244 tcgtcgacgtttttggtaaataagatttagttattataattataggtgatataattt---ttttttttcaaaaagtaactcatttaacaattaatttaag 35682148  T
Q  430 catttggtgtaccaatacactcaa 453  Q
     || ||||||||||||||||||||    
T  35682147 gatatggtgtaccaatacactcaa 35682124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 37962992 - 37963106
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||| ||||||||||||||||||| || ||  ||||||||  | ||||||||||||||| | |||||||||| || || ||| || |||||||||  |||    
T  37962992 taggaaacttctatggtacactcagaaattgtagtgtaccggtactcttgtttcacaaaatttataaattaacgatcatttttataaaataaaaatttat 37963091  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  37963092 ttgtcaatatttata 37963106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 39540869 - 39540907
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39540869 tcattgtttataaggatcatattacaaaatttacatttt 39540907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 40340685 - 40340647
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40340685 tcattgtttataaggatcatattacaaaatttacatttt 40340647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 449
Target Start/End: Original strand, 3425403 - 3425452
Alignment:
Q  400 aaaaataacacatttaactattaatttattcatttggtgtaccaatacac 449  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  3425403 aaaaataacacatttatctattaatttattaatttgatgtaccaatacac 3425452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 15726202 - 15726161
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  15726202 tcattgtttataaggatcatattacaaagtttacattttgtc 15726161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 23189217 - 23189258
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  23189217 tcattgtttataaggatcatattataaaatttacattttgtc 23189258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 28770096 - 28770137
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  28770096 tcattgtttataaggatcatattaaaaaatttacattttgtc 28770137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 450
Target Start/End: Complemental strand, 29744047 - 29743925
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaa-ttta 427  Q
    ||||| |||| ||||| |||| | ||||| ||||||||||| ||||||||| ||||||        |||||||||||||||||||||||| |||| ||||    
T  29744047 tcgtcaacgtttttggcaaataagatttagttattataattttaggtgatagaaaataatttttttcttcaaaaaataacacatttaactcttaatttta 29743948  T
Q  428 ttcatttggtgtaccaatacact 450  Q
       ||||||||||||||||||||    
T  29743947 aggatttggtgtaccaatacact 29743925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 32624433 - 32624392
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  32624433 tcattgtttataaggatcatattaaaaaatttacattttgtc 32624392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 43411666 - 43411707
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  43411666 tcattgtttataaggatcatattaaaaaatttacattttgtc 43411707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 480
Target Start/End: Complemental strand, 34302727 - 34302646
Alignment:
Q  399 aaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    |||||||||| ||||||||||||||||||   ||||| |||||||||||||||||       |||||||||| |||||||||    
T  34302727 aaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagaatttgcc 34302646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 35817669 - 35817727
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    |||||||||||||| ||||||||||||||||||    ||||||||| ||||||||||||    
T  35817669 cttcaaaaaataactcatttaactattaatttaaaattttggtgtatcaatacactcaa 35817727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 41631475 - 41631437
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  41631475 tcattgtttataagaatcatattacaaaatttacatttt 41631437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 34859584 - 34859625
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  34859584 tcattgtttataaggatcatattaaaaaattgacattttgtc 34859625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 37963144 - 37963185
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  37963144 tcattgtttataaggattatattaaaaaatttacattttgtc 37963185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 2148276 - 2148314
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  2148276 tcattgtttataaggatcaaattaaaaaatttacatttt 2148314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 19126170 - 19126132
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  19126170 tcattgtttataaggatcaaattaaaaaatttacatttt 19126132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 32063675 - 32063713
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  32063675 tcattgtttataaggatcatactaaaaaatttacatttt 32063713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 37313989 - 37314027
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  37313989 tcattatttataaggatcatattacaaaatttatatttt 37314027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 9530619 - 9530578
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  9530619 tcattgtttataaggattatattaaaaaaattacattttgtc 9530578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 10688650 - 10688609
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||| || |||||||||    
T  10688650 tcattgtttataaggatcatattaaaaaaatttcattttgtc 10688609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 11758865 - 11758824
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||| |||||||||||||||| ||||| |||||||||||    
T  11758865 tcattgtatataaggatcatattaaaaaatatacattttgtc 11758824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 13589014 - 13589055
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  13589014 tcattgtttataaggattatattaaaaaaattacattttgtc 13589055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 22798217 - 22798258
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||| |||||||||| |||| ||||||||||||    
T  22798217 tcattgtttataatgatcatattaaaaaaattacattttgtc 22798258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 33001597 - 33001638
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  33001597 tcattgtttataaggattatattaaaaaaattacattttgtc 33001638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 453
Target Start/End: Original strand, 38355038 - 38355095
Alignment:
Q  396 ttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||| ||||||||||| ||||||    |||||||||||| |||||||||    
T  38355038 ttcaaaaaataactcatttaactataaatttaagagtttggtgtaccagtacactcaa 38355095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 4e-62; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 2145843 - 2145722
Alignment:
Q  3 gagtaaaatttctaaatgtaaaaaaggagtgaaggtaggtaaaatatcaatgtacattccatgtagagtaatgaaaagaaataataatgtgttgaaataa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2145843 gagtaaaatttctaaatgtaaaaaaggagtgaaggtaggtaaaatatcaatgtacattccatgtagagtaatgaaaagaaataataatgtgttgaaataa 2145744  T
Q  103 tgcaatcgaaggtatgtaaata 124  Q
    ||||||||||||||||||||||    
T  2145743 tgcaatcgaaggtatgtaaata 2145722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 32518748 - 32518859
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  32518748 ggaacttctatggtacactcacaattttgagtgtaccagtactcctgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttg 32518847  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  32518848 tcaatatttata 32518859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 35224828 - 35224941
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | || |||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  35224828 agggaacttctatggtacactcacaattttgagtgtaccggtactattgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 35224927  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  35224928 tgtcaatatttata 35224941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 29638734 - 29638834
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  29638734 gggaacttctatggtacactcacaattttgagtgtaccagtactcttgtttcacaaaatatataaattaaaaatcactttaatgaaataaaaaggtattt 29638833  T
Q  225 g 225  Q
    |    
T  29638834 g 29638834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 1339262 - 1339149
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  1339262 agggaacttctatggtacactcacaattttgagtgtaccggtactcttttttcaaaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 1339163  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  1339162 tgtcaatatttata 1339149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 18871330 - 18871218
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||| ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  18871330 gggaacttctatggtacactcacaattttgagtgtaccggtactcttttttcaaaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 18871231  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  18871230 gtcaatatttata 18871218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 34969839 - 34969738
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| | |||||||||| || ||||||||| ||||||||||||||||    
T  34969839 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatttataaattaacgatcactttaataaaataaaaaggtattt 34969740  T
Q  225 gt 226  Q
    ||    
T  34969739 gt 34969738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 6015821 - 6015905
Alignment:
Q  142 actcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  6015821 actcacaattttgagtgtaccagtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgt 6015905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 33954859 - 33954747
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||| ||||||||||||||||| | |  | |||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  33954859 gggaacttctatggtatactcacaattttgagtgcatcggtactctagtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 33954760  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  33954759 gtcaatatttata 33954747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 34315122 - 34315236
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||||||||||||| |||||||||||||||| |  | |||||||| |||||| | |||||||||| || ||||||||||||||||||||||||    
T  34315122 tagggaacttctatggtacacccacaattttgagtgtatcggtactcttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaggtat 34315221  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  34315222 ttgtcaatatttata 34315236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 330 - 483
Target Start/End: Complemental strand, 11446887 - 11446733
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||| | ||| | ||||||||||||||||||||| ||||| |||| |        ||||||||||||||||||||||||||||||||||    
T  11446887 tcgtcgacgtttttgatgaataagatttaattattataattatagatgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttat 11446788  T
Q  429 tcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
    | ||||||||||||||||||||||        |||||||||| ||||||||||||    
T  11446787 tgatttggtgtaccaatacactcatatctttgggtgtaccatagaatttgccata 11446733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 26811165 - 26811053
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||| |||||||||||||||||| ||||| | | || |||||||  ||| ||||||||||||||| || |||||||||||||||||||||||    
T  26811165 gggaacttctatagtacactcacaattttgaatgtacaactacttttgtttcgtaaaatatataaattaaagatcattttaatgaaataaaaaggtattt 26811066  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  26811065 gtcaatatttata 26811053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 17010509 - 17010393
Alignment:
Q  333 tcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattca 431  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||| |    
T  17010509 tcgacgtttttggtaaataagatttaattattataattataggtgatataaaacaatttttctcttcaaaaaataacacatttaactattaatttattga 17010410  T
Q  432 tttggtgtaccaataca 448  Q
     ||||||||| ||||||    
T  17010409 attggtgtactaataca 17010393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 9226609 - 9226496
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||| ||||| ||||||||||||||||||  |  |||| || || ||| | |||||||||| || |||||||||||||||||||||||||    
T  9226609 agggaacttctatgctacacccacaattttgagtgtaccggtattctttttgcataaaatttataaattaacgatcactttaatgaaataaaaaggtatt 9226510  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  9226509 tgtcaatatttata 9226496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 17545750 - 17545632
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       || |||||||||||  |||||||||||||||||   ||||    
T  17545750 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttcctacaaaaaataacttatttaactattaatttaagaattt 17545651  T
Q  435 ggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||    
T  17545650 ggtgtaccaatacactcaa 17545632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 335 - 480
Target Start/End: Original strand, 32834034 - 32834180
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| |||| ||||||||||||| | |||    
T  32834034 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcattgaactattaatttaatgatt 32834133  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    ||||||||||||||||||||       |||||||||| |||||||||    
T  32834134 tggtgtaccaatacactcaaattattaggtgtaccatagaatttgcc 32834180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 24025843 - 24025744
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||| | ||||||| ||||||||||||||||||  | |||||||| |||||| | |||||||||| || ||||||||||||||||||| ||||    
T  24025843 tagggaacttcaacggtacacccacaattttgagtgtaccggtactcttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaagtat 24025744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 30020613 - 30020737
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||| ||||| | |||||| |||||||||||||||||||| |||  |        ||||||||||||||||||||||||||||||||||    
T  30020613 tcgtcgacgtttttgataaataagatttaaatattataattataggtgatagaaagcaatttttctcttcaaaaaataacacatttaactattaatttat 30020712  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||||||| || ||||||||||||    
T  30020713 tgatttggtatatcaatacactcaa 30020737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 16989154 - 16989224
Alignment:
Q  167 ctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  16989154 ctcttctttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttata 16989224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 13390531 - 13390415
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  13390531 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatt 13390432  T
Q  434 tggtgtaccaatacact 450  Q
    |||||||||||||||||    
T  13390431 tggtgtaccaatacact 13390415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 26358813 - 26358932
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||    ||    
T  26358813 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaagggtt 26358912  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  26358913 tggtgtaccaatacactcaa 26358932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 6265255 - 6265313
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||||    
T  6265255 cttcaaaaaataacacattaaactattaatttattgatttggggtatcaatacactcaa 6265313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 335 - 482
Target Start/End: Complemental strand, 6848656 - 6848508
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaata-nnnnnnncttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||        || ||||||||||| ||||||||||||||||||   |||    
T  6848656 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatt 6848557  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccat 482  Q
    | || ||||||| |||||||       |||||||||| |||||||||||    
T  6848556 ttgtataccaatgcactcaaattgttgggtgtaccatagaatttgccat 6848508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 8376345 - 8376403
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||||| ||||    
T  8376345 cttcaaaaaataacacatttaactaataatttattgacttggtgtaccaatacattcaa 8376403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 24487547 - 24487666
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttc-aaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||  ||||||       | |  |||||||||| ||||||||||||||||||   |||    
T  24487547 gacgtttttggtaaataagatttagttattataattataggtgatggaaaatatttttttcctataaaaaataactcatttaactattaatttaaagatt 24487646  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  24487647 tggtgtaccaatacactcaa 24487666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 1339111 - 1339070
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1339111 tcattgtttataaggatcatattacaaaatttacattttgtc 1339070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 6015954 - 6015995
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6015954 tcattgtttataaggatcatattacaaaatttacattttgtc 6015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 8401677 - 8401795
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| ||||| ||||||||||||||| |||  |       || ||||||||||| ||||||||||||||||||   ||||    
T  8401677 gacgtttttggtaaataagatttagttattttaattataggtgatagaaataattttttcctacaaaaaataactcatttaactattaatttaaagattt 8401776  T
Q  435 ggtgtaccaatacactcaa 453  Q
    ||||||| |||||||||||    
T  8401777 ggtgtacgaatacactcaa 8401795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 18871180 - 18871139
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18871180 tcattgtttataaggatcatattacaaaatttacattttgtc 18871139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 33954708 - 33954667
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33954708 tcattgtttataaggatcatattacaaaatttacattttgtc 33954667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 35224979 - 35225020
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35224979 tcattgtttataaggatcatattacaaaatttacattttgtc 35225020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 34196075 - 34196188
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||| ||||| | ||||||||||||||||||||||||||| ||||| |       ||| ||||||||||| ||||||||||||||||||| ||||| |      
T  34196075 tttgataaataagatttaattattataattataggtgatagaaaataatttttctcttaaaaaaataacatatttaactattaatttattgatttgatta 34196174  T
Q  440 accaatacactcaa 453  Q
    | ||||||||||||    
T  34196175 atcaatacactcaa 34196188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 15383525 - 15383583
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||| ||||||||| ||||||| | ||||||| |||||||||||||||    
T  15383525 cttcaaaaaataacatatttaactaataatttactgatttggtataccaatacactcaa 15383583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 24213057 - 24212939
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||| ||       ||| |||||||| || ||||||||||||||||||   |||    
T  24213057 gacgtttttggtaaataagatttagttattataattataggtgatagaaa-taattttttcttacaaaaaatcactcatttaactattaatttaaggatt 24212959  T
Q  434 tggtgtaccaatacactcaa 453  Q
    | ||||||||||||||||||    
T  24212958 tagtgtaccaatacactcaa 24212939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 26811034 - 26810993
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  26811034 tcattgtttataaggatcatgttacaaaatttacattttgtc 26810993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 29638884 - 29638925
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  29638884 tcattgtttataaggatcatattaaaaaatttacattttgtc 29638925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 34969709 - 34969668
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  34969709 tcattgtttataaggatcatattaaaaaatttacattttgtc 34969668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 2258985 - 2258930
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||| ||||||||||||||||||   |||| ||||||||||||||||||    
T  2258985 caaaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaa 2258930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 16989262 - 16989300
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  16989262 tcattgtttataaggattatattacaaaatttacatttt 16989300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 1096303 - 1096253
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaataca 448  Q
    ||||||||||| ||||||||||||||||||   |||| |||||||||||||    
T  1096303 caaaaaataactcatttaactattaatttaaagatttagtgtaccaataca 1096253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 27719078 - 27719116
Alignment:
Q  199 cactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  27719078 cactttaatgaaataaaaaggtatttgtcaatatttata 27719116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 9226458 - 9226417
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  9226458 tcattgtttataaggattatattaaaaaaattacattttgtc 9226417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 34315274 - 34315315
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  34315274 tcattgtttataaggattatattaaaaaaattacattttgtc 34315315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 5e-46; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 27967919 - 27967805
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27967919 tagggaacttctatggtacactcacaattttgagtgtaccagtactcttgtttcacaaattatataaattaaagaccactttaatgaaataaaatggtat 27967820  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  27967819 ttgtcaatatttata 27967805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 36570055 - 36569943
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  36570055 gggaacttctatggtacactcacaattttgagtgtaccagtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 36569956  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  36569955 gtcaatatttata 36569943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 10778985 - 10779103
Alignment:
Q  119 taaatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaag 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  10778985 taaatagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaag 10779084  T
Q  219 gtatttgtcattgtttata 237  Q
     ||||||||| | ||||||    
T  10779085 atatttgtcaatatttata 10779103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 44998817 - 44998705
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  44998817 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 44998718  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  44998717 gtcaatatttata 44998705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 56361568 - 56361692
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  56361568 tcgtcgacgtttttggtaaataatatttaattattataattataggtgatataaaatattttttctcttcaaaaaataacacatttaactattaatttat 56361667  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | |||||||||||||||||||||||    
T  56361668 tgatttggtgtaccaatacactcaa 56361692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 38955040 - 38955154
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  38955040 tagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtat 38955139  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  38955140 ttgtcaatatttata 38955154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 24292383 - 24292273
Alignment:
Q  127 gaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    ||||||||||||||||||||||||||| ||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  24292383 gaacttctatggtacactcacaattttaagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgt 24292284  T
Q  227 cattgtttata 237  Q
    || | ||||||    
T  24292283 caatatttata 24292273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 46630648 - 46630757
Alignment:
Q  128 aacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtc 227  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||    
T  46630648 aacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtc 46630747  T
Q  228 attgtttata 237  Q
    | | ||||||    
T  46630748 aatatttata 46630757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 48549663 - 48549776
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||| |||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  48549663 agggaatttctatagtacactcacaattttgagtgtaccgatactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatt 48549762  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  48549763 tgtcaatatttata 48549776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 2526582 - 2526466
Alignment:
Q  121 aatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||| || ||| ||||||||||||||| ||    
T  2526582 aatagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaacgatcaccttaatgaaataaaaatgt 2526483  T
Q  221 atttgtcattgtttata 237  Q
    |||||||| | ||||||    
T  2526482 atttgtcaatatttata 2526466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 21515395 - 21515284
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||| ||||||||||||||||||||||||  | ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||    
T  21515395 ggaacttctatgatacactcacaattttgagtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttg 21515296  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  21515295 tcaatatttata 21515284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 42244537 - 42244649
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||| ||||| |||||||||||| || |||||||||||||||||||| |||||    
T  42244537 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgttttacaaaatatataaattaacgatcactttaatgaaataaaaagatattt 42244636  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  42244637 gtcaatatttata 42244649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 330 - 452
Target Start/End: Complemental strand, 36091209 - 36091087
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttatt 429  Q
    |||||||||| |||| ||||| | ||||||||||||||||||||||||||| |||| |       ||||||||||||||||||||||||||||||||| |    
T  36091209 tcgtcgacgtttttgataaataagatttaattattataattataggtgatagaaaacagttttctcttcaaaaaataacacatttaactattaatttaat 36091110  T
Q  430 catttggtgtaccaatacactca 452  Q
     ||||||||||||||||||||||    
T  36091109 gatttggtgtaccaatacactca 36091087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 16004533 - 16004645
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||| ||||| ||| |||||||||||||||  | |||||||||||||||||||||||    
T  16004533 gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcaaaaaatatataaattaaagataaatttaatgaaataaaaaggtattt 16004632  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  16004633 gtcaatatttata 16004645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 46221993 - 46222104
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||| |||||||||||||||||||||||| ||||  | ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  46221993 gggaactt-tatggtacactcacaattttgagtataccggtactcttctttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 46222091  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  46222092 gtcaatatttata 46222104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 29646764 - 29646651
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||        ||||||||||||||| ||||||||||||||||||| |||||||||    
T  29646764 tttggtaaataagatttaattattataattataggtgatagaaaataacttttttcttcaaaaaataacatatttaactattaatttattgatttggtgt 29646665  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  29646664 accaatacactcaa 29646651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 33612930 - 33612818
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||| ||||||||||||||||||  | |||||||| |||||| | |||||||||| || ||||||||||||||||||| ||||||    
T  33612930 gggaacttctatggtacacccacaattttgagtgtaccggtactcttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaagtattt 33612831  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  33612830 gtcaatatttata 33612818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 46633623 - 46633735
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||| ||  |||||||||||||||||||||||  | ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  46633623 gggaacttctttgccacactcacaattttgagtgtaccggtactcttgttttacaaaatatataaattaaagatcactttaatgaaataaaaatgtattt 46633722  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  46633723 gtcaatatttata 46633735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 45629513 - 45629404
Alignment:
Q  128 aacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtc 227  Q
    ||||| ||||||||| ||| |||||||||||||||  |  |||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  45629513 aacttttatggtacattcataattttgagtgtaccggtattcttgtttcacaaaatatataaattaaatatcactttaatgaaataaaaaggtatttgtc 45629414  T
Q  228 attgtttata 237  Q
    | | ||||||    
T  45629413 aatatttata 45629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 333 - 449
Target Start/End: Original strand, 39162063 - 39162180
Alignment:
Q  333 tcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattca 431  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||||| |||| |        ||||||||||||||||||||||||||||||||||| |    
T  39162063 tcgacgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttattga 39162162  T
Q  432 tttggtgtaccaatacac 449  Q
     |||||||||||||||||    
T  39162163 cttggtgtaccaatacac 39162180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 54499981 - 54499880
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||| ||||| ||| |||||||||||||||  | ||||||||||||||| | |||||||||| || ||||||||||| ||||||||||||||    
T  54499981 gggaacttctatcgtacattcataattttgagtgtaccggtactcttgtttcacaaaatttataaattaacgatcactttaatgagataaaaaggtattt 54499882  T
Q  225 gt 226  Q
    ||    
T  54499881 gt 54499880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 52257539 - 52257427
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||||| ||| |||||||||||||    | ||||||||||| ||| |||||||||||| || || |||||||||||||||||||||||    
T  52257539 gggaacttctatggtacattcataattttgagtgtattggtactcttgtttcataaaatatataaattaacgatcattttaatgaaataaaaaggtattt 52257440  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  52257439 gtcaatatttata 52257427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 23639235 - 23639334
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||| |||||||||||||||| |||||| ||||||||  | || |||||| ||||| |||||||||||| || |||||||||||||||||||||||||    
T  23639235 agggaatttctatggtacactcataattttaagtgtaccggtactattgttttacaaaatatataaattaacgatcactttaatgaaataaaaaggtatt 23639334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 47302547 - 47302423
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  47302547 tcgtcgacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 47302448  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| |||||||||||||||||||    
T  47302447 tgattgggtgtaccaatacactcaa 47302423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 332 - 453
Target Start/End: Original strand, 46216029 - 46216151
Alignment:
Q  332 gtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattc 430  Q
    |||||||| |||||| ||| | ||||||||||||||||||||||||||| |||| |        |||||||||||||||||||||| ||||||||| ||     
T  46216029 gtcgacgtttttggttaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaattattaatttgttg 46216128  T
Q  431 atttggtgtaccaatacactcaa 453  Q
    ||| |||||||||||||||||||    
T  46216129 attgggtgtaccaatacactcaa 46216151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 341 - 452
Target Start/End: Complemental strand, 9858384 - 9858272
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||| ||||| | ||||||||||||||||||||||||||| |||| |        ||||||||||||||||||||||||||||||||| | |||||||||    
T  9858384 tttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttaatgatttggtgt 9858285  T
Q  440 accaatacactca 452  Q
    | |||||||||||    
T  9858284 atcaatacactca 9858272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 330 - 452
Target Start/End: Complemental strand, 31908594 - 31908471
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | |||| |||||||||||||||||||||| |||| |        ||||||||||| |||||||||||||||||||||     
T  31908594 tcgtcgatgtttttgataaataagatttgattattataattataggtgatagaaaacaatttttctcttcaaaaaatcacacatttaactattaatttaa 31908495  T
Q  429 tcatttggtgtaccaatacactca 452  Q
    | ||||||||||||||||||||||    
T  31908494 tgatttggtgtaccaatacactca 31908471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 46041847 - 46041728
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||||||||| |       || ||||||||||| ||||||||||||||||||   |||    
T  46041847 gacgtttttggtaaataagatttagttattataattataggtgatataaaataattttttcctacaaaaaataactcatttaactattaatttaaagatt 46041748  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||| ||||||||||||    
T  46041747 tggtgtatcaatacactcaa 46041728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 335 - 480
Target Start/End: Original strand, 51436073 - 51436220
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn--cttcaaaaaataacacatttaactattaatttattcat 432  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||         || ||||||||||| ||||||||||||||||||   ||    
T  51436073 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttttcctacaaaaaataactcatttaactattaatttaagaat 51436172  T
Q  433 ttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    |||||||||||||||||||||       |||||||||| |||||||||    
T  51436173 ttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 51436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 41759920 - 41760040
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn--cttcaaaaaataacacatttaactattaatttattcat 432  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||         || ||||||||||| ||||||||||||||||||   ||    
T  41759920 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatattttttactacaaaaaataactcatttaactattaatttaaggat 41760019  T
Q  433 ttggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||||    
T  41760020 ttggtgtaccaatacactcaa 41760040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 1414357 - 1414478
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttatt 429  Q
    |||||||||| |||| |||||   ||||||||||||||||||||||||||| ||||||         | ||||||  ||||||||||||||||||||| |    
T  1414357 tcgtcgacgtttttgataaatatgatttaattattataattataggtgatagaaaataatttttctcttaaaaaa--acacatttaactattaatttaat 1414454  T
Q  430 catttggtgtaccaatacactcaa 453  Q
     |||||||||||||||||||||||    
T  1414455 gatttggtgtaccaatacactcaa 1414478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 484
Target Start/End: Complemental strand, 30342970 - 30342821
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| ||||| ||||||||||||||| |||  |       || ||||||||||| ||||||||||||||||||   ||||    
T  30342970 gacgtttttggtaaataagatttagttattttaattataggtgatagaaataattttttcctacaaaaaataactcatttaactattaatttaaagattt 30342871  T
Q  435 ggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccataa 484  Q
    |||||||||||||||||||       ||||||||||  ||||||||||||    
T  30342870 ggtgtaccaatacactcaaatggttgggtgtaccatataatttgccataa 30342821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 48579176 - 48579288
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | |||||||||| ||||||||||||||||||   ||||||||||    
T  48579176 tttggtaaataagatttagttattataattataggtgatagaaaatatttttctcctaaaaaaataactcatttaactattaatttaaggatttggtgta 48579275  T
Q  441 ccaatacactcaa 453  Q
    |||||||| ||||    
T  48579276 ccaatacattcaa 48579288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 27539061 - 27538942
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| || ||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  27539061 gacgttttcggtaaataagatttagttattataattataggtgatagaaaataattatttcctacaaaaaataactcatttaactattaatttaaggatt 27538962  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  27538961 tggtgtaccaatacactcaa 27538942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 484
Target Start/End: Complemental strand, 28037832 - 28037681
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn--cttcaaaaaataacacatttaactattaatttattcat 432  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||         || |||||| |||| ||||||||||||||||||   ||    
T  28037832 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttttctacaaaaagtaactcatttaactattaatttaaggat 28037733  T
Q  433 ttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccataa 484  Q
    |||||||||||||||||||||       |||| ||||| |||||||||||||    
T  28037732 ttggtgtaccaatacactcaaattgttgggtgcaccatagaatttgccataa 28037681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 37855267 - 37855148
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  37855267 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcatacaaaaaataactcatttaactattaatttaaggatt 37855168  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||| ||||||||||    
T  37855167 tggtgtacctatacactcaa 37855148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 52589217 - 52589098
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| || |||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  52589217 gacgtttttggtaaataagatttagttgttataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatt 52589118  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  52589117 tggtgtaccaatacactcaa 52589098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 341 - 450
Target Start/End: Complemental strand, 30539709 - 30539599
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||    
T  30539709 tttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtgt 30539610  T
Q  440 accaatacact 450  Q
    |||||||||||    
T  30539609 accaatacact 30539599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 52809205 - 52809323
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||  ||||||       ||  |||||||||| ||||||||||||||||||   |||     
T  52809205 gacgtttttggtaaataagatttagttattataattataggtgattgaaaatattttttcctataaaaaataactcatttaactattaatttaaaaattc 52809304  T
Q  435 ggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||    
T  52809305 ggtgtaccaatacactcaa 52809323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 46004590 - 46004703
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgata-taaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||| ||||| | ||||||||||||||||| ||||||||| ||||  |       |||||||||||||||||||| || |||||| |||| |||||||||    
T  46004590 tttgataaataagatttaattattataattgtaggtgatagtaaacaatttttctcttcaaaaaataacacattttacgattaatatattaatttggtgt 46004689  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  46004690 accaatacactcaa 46004703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 53695652 - 53695776
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | |||| |||||||||||||||||||||  |||| |        |||||||||||||||||||| ||||||||||| |    
T  53695652 tcgtcgacgtttttggttaataagattttattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttgactattaattttt 53695751  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||||| |||||||||||| ||||    
T  53695752 tgatttgatgtaccaatacattcaa 53695776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 14802858 - 14802739
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||  ||||||        || ||||||||||| ||||||||||||||||||   |||    
T  14802858 gacgtttttggtaaataagatttagttattataattataggtgatgaaaaatattttttttctacaaaaaataactcatttaactattaatttaaggatt 14802759  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||| ||||||||||||    
T  14802758 tggtgtatcaatacactcaa 14802739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 395 - 449
Target Start/End: Complemental strand, 31681422 - 31681368
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacac 449  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  31681422 cttcgaaaaataacacacttaactattaatttattgatttggtgtaccaatacac 31681368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 34280489 - 34280608
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| |||||||||||||| |||||| ||||||       | | |||||||||||  |||||||||||||||||   |||    
T  34280489 gacgtttttggtaaataagatttagttattataattatatgtgatagaaaataattttttcctacaaaaaataacttatttaactattaatttaaggatt 34280588  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  34280589 tggtgtaccaatacactcaa 34280608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 10779141 - 10779182
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10779141 tcattgtttataaggatcatattacaaaatttacattttgtc 10779182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 16004683 - 16004724
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16004683 tcattgtttataaggatcatattacaaaatttacattttgtc 16004724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 24292235 - 24292194
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24292235 tcattgtttataaggatcatattacaaaatttacattttgtc 24292194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 27967767 - 27967726
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27967767 tcattgtttataaggatcatattacaaaatttacattttgtc 27967726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 38955192 - 38955233
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38955192 tcattgtttataaggatcatattacaaaatttacattttgtc 38955233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 44998667 - 44998626
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44998667 tcattgtttataaggatcatattacaaaatttacattttgtc 44998626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 46222142 - 46222183
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  46222142 tcattgtttataaggatcatattacaaaatttacattttgtc 46222183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 3716465 - 3716352
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||| ||| | ||||| |||||||||| |||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||    
T  3716465 tttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtgt 3716366  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  3716365 accaatacactcaa 3716352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 21515246 - 21515208
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21515246 tcattgtttataaggatcatattacaaaatttacatttt 21515208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 2526428 - 2526387
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  2526428 tcattgtttataaggatcatattaaaaaatttacattttgtc 2526387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 36569905 - 36569864
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  36569905 tcattgtttataaggatcatattaaaaaatttacattttgtc 36569864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 396 - 453
Target Start/End: Original strand, 36592357 - 36592414
Alignment:
Q  396 ttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||| ||||||||||||||||||   |||||||||| ||||||||||||    
T  36592357 ttcaaaaaataactcatttaactattaatttaaggatttggtgtaacaatacactcaa 36592414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 42244687 - 42244728
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  42244687 tcattgtttataaggatcatattaaaaaatttacattttgtc 42244728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 45629365 - 45629324
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  45629365 tcattgtttataaggatcgtattacaaaatttacattttgtc 45629324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 48549816 - 48549857
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  48549816 tcattgtttataaggatcatattaaaaaatttacattttgtc 48549857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 43137689 - 43137741
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacact 450  Q
    ||||||||||| ||||||||||||||||||   ||||||||||||||||||||    
T  43137689 caaaaaataactcatttaactattaatttaagaatttggtgtaccaatacact 43137741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 42680619 - 42680710
Alignment:
Q  146 acaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    |||| ||| ||||||||  | ||||||||| ||||| | |||||||||| || |||||| ||||||||||||| ||||||||| | ||||||    
T  42680619 acaaattttagtgtaccggtactcttgttttacaaaatttataaattaacgatcacttttatgaaataaaaagctatttgtcaatatttata 42680710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 452
Target Start/End: Original strand, 18425455 - 18425496
Alignment:
Q  411 atttaactattaatttattcatttggtgtaccaatacactca 452  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  18425455 atttaactattaatttaatgatttggtgtaccaatacactca 18425496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 23639385 - 23639426
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  23639385 tcattgtttataaggatcatattaaaaaaattacattttgtc 23639426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 27636150 - 27636045
Alignment:
Q  122 atagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggta 221  Q
    ||||| |||||||| |||||||||| |  ||| ||||||||  | |||||||| |||||| | |||||||||| || || ||  ||||||||||||| ||    
T  27636150 ataggcaacttctacggtacactcatatattttagtgtaccggtactcttgttccacaaaatttataaattaatgatcatttatatgaaataaaaagcta 27636051  T
Q  222 tttgtc 227  Q
    ||||||    
T  27636050 tttgtc 27636045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 46633753 - 46633794
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  46633753 tcattgtttataagaatcatattacaaaatctacattttgtc 46633794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 55129918 - 55129959
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  55129918 tcattgtttataaagatcatattaaaaaatttacattttgtc 55129959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 342 - 483
Target Start/End: Original strand, 37519231 - 37519373
Alignment:
Q  342 ttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    ||||||||| | ||||| ||||||||||||||||||||| ||||| |       || ||||||||||  |||| ||||||||||||| |  | |||||||    
T  37519231 ttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataattcattgaactattaatttaatggtatggtgta 37519330  T
Q  441 ccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
    |||||||| ||||       ||| |||||| ||||||||||||    
T  37519331 ccaatacattcaaatgattgggtataccatagaatttgccata 37519373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 342 - 483
Target Start/End: Original strand, 37523447 - 37523589
Alignment:
Q  342 ttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    ||||||||| | ||||| ||||||||||||||||||||| ||||| |       || ||||||||||  |||| ||||||||||||| |  | |||||||    
T  37523447 ttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataattcattgaactattaatttaatggtatggtgta 37523546  T
Q  441 ccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
    |||||||| ||||       ||| |||||| ||||||||||||    
T  37523547 ccaatacattcaaatgattgggtataccatagaatttgccata 37523589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 38975427 - 38975302
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaa-taacacatttaactattaattta 427  Q
    ||||||| || ||| |||||| | || || ||||||||||||||||||||| ||||||        |||||||||| |||| ||||||||||||||||||    
T  38975427 tcgtcgatgtttttcgtaaataagatatagttattataattataggtgatagaaaataatttttttcttcaaaaaaataactcatttaactattaattta 38975328  T
Q  428 ttcatttggtgtaccaatacactcaa 453  Q
       |||| |||||| |||||||||||    
T  38975327 aagattttgtgtactaatacactcaa 38975302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 42680748 - 42680788
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgt 266  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  42680748 tcattgtttataaggattatattaaaaaatttacattttgt 42680788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 53389106 - 53389226
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn--cttcaaaaaataacacatttaactattaatttattcat 432  Q
    ||||| |||| ||||| | ||||| ||||||||||||||| ||||| ||||||         || ||||||||||| ||||||||||||||||||   ||    
T  53389106 gacgtttttgataaataagatttagttattataattatagatgatagaaaatattttttttcctacaaaaaataactcatttaactattaatttaaagat 53389205  T
Q  433 ttggtgtaccaatacactcaa 453  Q
    || ||||||| ||||||||||    
T  53389206 ttagtgtaccgatacactcaa 53389226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 488
Target Start/End: Complemental strand, 38835932 - 38835844
Alignment:
Q  400 aaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccataagatt 488  Q
    ||||| ||| ||||||||||||||||||   ||||| |||||||||||||||||       |||||||||| ||||||| |||| ||||    
T  38835932 aaaaaaaactcatttaactattaatttaagaatttgatgtaccaatacactcaaattattaggtgtaccatagaatttgtcatatgatt 38835844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 387
Target Start/End: Original strand, 30891401 - 30891447
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaata 387  Q
    |||| ||||| | ||||||||||||||||||||||||||| ||||||    
T  30891401 tttgataaataagatttaattattataattataggtgatagaaaata 30891447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 387
Target Start/End: Original strand, 33076247 - 33076293
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaata 387  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  33076247 tttggtaaataagatttagttattataattataggtgatagaaaata 33076293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 387
Target Start/End: Complemental strand, 52591944 - 52591898
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaata 387  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  52591944 tttggtaaataagatttagttattataattataggtgatagaaaata 52591898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 33612780 - 33612739
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  33612780 tcattgtttataaggattatattaaaaaaattacattttgtc 33612739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 46630795 - 46630836
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||| || |||| ||||||||||||    
T  46630795 tcattgtttataaggatcatactaaaaaaattacattttgtc 46630836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 5e-46; HSPs: 93)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 44500133 - 44500247
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44500133 tagggaaattctatggtacactcacaattttgagtgtaccagtactcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 44500232  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  44500233 ttgtcaatatttata 44500247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 36019415 - 36019528
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  36019415 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatatataaattaaagaccactttaatgaaataaaaaggtatt 36019514  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  36019515 tgtcaatatttata 36019528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 51235928 - 51235816
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  51235928 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 51235829  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  51235828 gtcaatatttata 51235816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 14460594 - 14460479
Alignment:
Q  122 atagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggta 221  Q
    ||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  14460594 atagggaacttctatggtacactcataattttgagtgtaccggtactcttgtttcacaaaataaataaattaaagatcactttaatgaaataaaaaggta 14460495  T
Q  222 tttgtcattgtttata 237  Q
    ||||||| ||||||||    
T  14460494 tttgtcaatgtttata 14460479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 35352191 - 35352302
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  35352191 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttg 35352290  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  35352291 tcaatatttata 35352302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 52782158 - 52782271
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  52782158 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagattactttaatgaaataaaaaggtatt 52782257  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  52782258 tgtcaatatttata 52782271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 49950924 - 49951036
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  49950924 gggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 49951023  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  49951024 gtcaatatttata 49951036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 32720394 - 32720281
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||||||||||||||||||||||||||||||| |  | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  32720394 agggaacttctatggtacactcacaattttgagtgtatcggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatt 32720295  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  32720294 tgtcaatatttata 32720281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 44963011 - 44962899
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||| ||||||||  | ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  44963011 gggaacttctatggtacactcacaattttaagtgtaccggtactcttgttttacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 44962912  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  44962911 gtcaatatttata 44962899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 48925411 - 48925523
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||| |||||||||||||||||||||||||||||||   | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  48925411 gggaatttctatggtacactcacaattttgagtgtactggtactcttgtttcataaaatatataaattaaagaccactttaatgaaataaaaaggtattt 48925510  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  48925511 gtcaatatttata 48925523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 33830937 - 33830825
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||||||||||||||||||||||||   | ||||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||    
T  33830937 gggaacttctatggtacactcacaattttgagtgtactggtactcttgtttcataaaatatataaattaatgatcactttaatgaaataaaaaggtattt 33830838  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  33830837 gtcaatatttata 33830825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 37567625 - 37567513
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||||||||| ||||||||||||| |  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  37567625 gggaacttctatggtacactcataattttgagtgtatcggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaatgtattt 37567526  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  37567525 gtcaatatttata 37567513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 53376997 - 53376886
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||| ||||||  | |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  53376997 gggaacttctatggtacactcacaattttgaatgtaccggtactcttgtt-cacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 53376899  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  53376898 gtcaatatttata 53376886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 53186408 - 53186310
Alignment:
Q  128 aacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    |||||||||||||||||||||||||||||||| |   | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  53186408 aacttctatggtacactcacaattttgagtgtgctggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgt 53186310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 50465880 - 50465767
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  |  |||||||| ||||| | |||||||||| || |||||||||||||||||||||||||    
T  50465880 agggaacttctatggtacactcacaattttgagtgtaccggtattcttgttttacaaaatttataaattaacgatcactttaatgaaataaaaaggtatt 50465781  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  50465780 tgtcaatatttata 50465767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 35320360 - 35320472
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||| ||||| | ||||||||||  | ||||||||||||||||||||||||||    
T  35320360 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgttttacaaaatttataaattaacaatcactttaatgaaataaaaaggtattt 35320459  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  35320460 gtcaatatttata 35320472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 48388757 - 48388860
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||| ||||||||||||||||||||||||||||||||||   | ||||||||||||||| |||||||||||| || ||||||||||||||||||| ||||    
T  48388757 taggaaacttctatggtacactcacaattttgagtgtactggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaagtat 48388856  T
Q  223 ttgt 226  Q
    ||||    
T  48388857 ttgt 48388860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 9322429 - 9322542
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaa-gaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||||||||||| |||||||||||||||| ||   | ||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  9322429 gggaacttctatggtaccctcacaattttgagtggactggtactcttgtttcacaaaatatataaattaaaagatcactttaatgaaataaaaaggtatt 9322528  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  9322529 tgtcaatatttata 9322542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 120 - 237
Target Start/End: Complemental strand, 45927632 - 45927515
Alignment:
Q  120 aaatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaagg 219  Q
    ||||||||||||||||||||||||||| ||||||||||||| |  | ||||||||| | ||| | |||||||||| || |||||||||||||||||||||    
T  45927632 aaatagggaacttctatggtacactcataattttgagtgtatcggtactcttgttttataaaatttataaattaacgatcactttaatgaaataaaaagg 45927533  T
Q  220 tatttgtcattgtttata 237  Q
    ||||||||| | ||||||    
T  45927532 tatttgtcaatatttata 45927515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 347098 - 346985
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||||||||||||||||| ||||||||||||||   |  |  ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  347098 agggaacttctatggtacactcataattttgagtgtactggtatttctgtttcacaaaatatataaattaaagatcactttaatgtaataaaaaggtatt 346999  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  346998 tgtcaatatttata 346985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 7157037 - 7157150
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||| ||  || |||||||||||||||  | |||||||| |||||| | |||||||||| ||||||||||||||||||||||||||||    
T  7157037 agggaacttctatggtgcatccataattttgagtgtaccggtactcttgttgcacaaaatttataaattaacgaccactttaatgaaataaaaaggtatt 7157136  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  7157137 tgtcaatatttata 7157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 54009314 - 54009201
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||| ||||||||||||  || |||||||||||||||  | |||||||| |||||||| |||||||||| || |||||||||||||||||||||||||    
T  54009314 agggaatttctatggtacatccataattttgagtgtaccggtactcttgttgcacaaattttataaattaacgatcactttaatgaaataaaaaggtatt 54009215  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  54009214 tgtcaatatttata 54009201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 55365380 - 55365475
Alignment:
Q  131 ttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    ||||||||||||||||||||||||| |||||   | ||||||||||||||| |||||||||||| || ||||||||||||||||||| ||||||||    
T  55365380 ttctatggtacactcacaattttgaatgtactggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaagtatttgt 55365475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 336 - 480
Target Start/End: Complemental strand, 11140391 - 11140247
Alignment:
Q  336 acgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttg 435  Q
    |||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       || ||||||||||| ||||||||||||||||||   |||||    
T  11140391 acgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttctacaaaaaataactcatttaactattaatttaaggatttg 11140292  T
Q  436 gtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    ||||||||||||||||||       |||||||||| |||||||||    
T  11140291 gtgtaccaatacactcaaattattgggtgtaccatagaatttgcc 11140247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 354 - 449
Target Start/End: Complemental strand, 3136397 - 3136301
Alignment:
Q  354 atttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacac 449  Q
    |||||||||||||||||||||||||||||||| |        ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3136397 atttaattattataattataggtgatataaaacaatttttctcttaaaaaaataacacatttaactattaatttattgatttggtgtaccaatacac 3136301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 48990696 - 48990589
Alignment:
Q  130 cttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcat 229  Q
    ||||||||||||||||||||||||||||| |||  | ||||||||| | ||| ||||||||| ||| | || |||||||||||||||||||||||||||     
T  48990696 cttctatggtacactcacaattttgagtgcaccggtactcttgttttataaaatatataaatcaaaaatcattttaatgaaataaaaaggtatttgtcaa 48990597  T
Q  230 tgtttata 237  Q
    | ||||||    
T  48990596 tatttata 48990589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 330 - 387
Target Start/End: Original strand, 788726 - 788783
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaata 387  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  788726 tcgtcgacgtttttggtaaatgatatttaattattataattataggtgatataaaata 788783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 341 - 449
Target Start/End: Original strand, 29629252 - 29629358
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    |||||||||| ||||||||||||||||||||||||| |||  |||||       ||||| ||||||||||||||||  ||||||||||| ||||||||||    
T  29629252 tttggtaaataatatttaattattataattataggtaatagtaaataattttctcttcataaaataacacatttaa--attaatttattgatttggtgta 29629349  T
Q  441 ccaatacac 449  Q
    |||||||||    
T  29629350 ccaatacac 29629358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 335 - 480
Target Start/End: Original strand, 29786857 - 29787003
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  29786857 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagaatt 29786956  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    ||||||||||||||||||||       |||||||||| |||||||||    
T  29786957 tggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 29787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 333 - 449
Target Start/End: Original strand, 43715006 - 43715123
Alignment:
Q  333 tcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattca 431  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||||| |||| |        ||||||||||||| || ||||||||||| |||||| |    
T  43715006 tcgacgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataatacgtttaactattagtttattga 43715105  T
Q  432 tttggtgtaccaatacac 449  Q
    ||||||||||||||||||    
T  43715106 tttggtgtaccaatacac 43715123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 330 - 483
Target Start/End: Original strand, 53516836 - 53516990
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        ||||||||||||| |||||||||||||||||| |    
T  53516836 tcgtcgacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataatacatttaactattaatttgt 53516935  T
Q  429 tcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
    | ||| |||||||||||||||||||        ||||||||| ||||||||||||    
T  53516936 tgattgggtgtaccaatacactcaaatttttaagtgtaccatagaatttgccata 53516990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 2667849 - 2667779
Alignment:
Q  167 ctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||    
T  2667849 ctcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtaattgtcaatatttata 2667779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 4663459 - 4663517
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  4663459 cttcaaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaa 4663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 7671952 - 7671830
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttatt 429  Q
    |||||||||| |||||| ||| | |||| |||||||||||||||| ||||  |||| |       |||||||||||||||||||||||||||||||| ||    
T  7671952 tcgtcgacgtttttggttaataagattttattattataattatagatgatggaaaa-aaaattctcttcaaaaaataacacatttaactattaatttgtt 7671854  T
Q  430 catttggtgtaccaatacactcaa 453  Q
     ||| |||||||||||||||||||    
T  7671853 tattgggtgtaccaatacactcaa 7671830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 50560364 - 50560462
Alignment:
Q  128 aacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    ||||||||||||||| |||||||||| |||||| |    ||||||||||||||| |||||||||||| || ||||||||||||||| ||| ||||||||    
T  50560364 aacttctatggtacagtcacaattttaagtgtatcgggactcttgtttcacaaaatatataaattaaggatcactttaatgaaatacaaatgtatttgt 50560462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 26409629 - 26409742
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||| |||||||||| || ||| ||||||||  | ||||||||||||||| | |||||||||| || || ||| ||||||||||||| ||||    
T  26409629 agggaacttctacggtacactcagaaattttagtgtaccggtactcttgtttcacaaaatttataaattaacgatcatttttatgaaataaaaagttatt 26409728  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  26409729 tgtcaatatttata 26409742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 27647623 - 27647505
Alignment:
Q  336 acgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcattt 434  Q
    |||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| || |||     
T  27647623 acgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgattg 27647524  T
Q  435 ggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||    
T  27647523 ggtgtaccaatacactcaa 27647505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 40650207 - 40650094
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||    
T  40650207 tttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtgt 40650108  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  40650107 accaatacactcaa 40650094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 484
Target Start/End: Original strand, 44670518 - 44670668
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  44670518 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatt 44670617  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccataa 484  Q
    | ||||||||||||||||||       |||||||| | |||||||||||||    
T  44670618 ttgtgtaccaatacactcaaattgttgggtgtaccttagaatttgccataa 44670668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 876482 - 876598
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnc-ttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| ||||| |||| | ||||| ||||||||||||||||||||| ||||||       | ||||||||||||| ||||||||||||||||||   |||    
T  876482 gacgtttttggcaaataagatttagttattataattataggtgatagaaaataattttttccttcaaaaaataactcatttaactattaatttaaggatt 876581  T
Q  434 tggtgtaccaatacact 450  Q
    |||||||||||||||||    
T  876582 tggtgtaccaatacact 876598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 19547640 - 19547516
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||| ||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  19547640 tcgtcgacgtttttggttaataagatttaattagtataattataggtgatggaaaacaatttatctcttcaaaaaataacacatttaactattaatttgt 19547541  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| |||||||| ||||||||||    
T  19547540 tgattgggtgtaccgatacactcaa 19547516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 21289068 - 21289192
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||| ||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  21289068 tcgtagacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 21289167  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| |||||||| ||||||||||    
T  21289168 tgattgggtgtacctatacactcaa 21289192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 336 - 480
Target Start/End: Complemental strand, 42067724 - 42067579
Alignment:
Q  336 acgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcattt 434  Q
    |||| |||||||||| | ||||| ||||||||||||||||||||  ||||||       | | ||||||||||| ||||||||||||||||||   ||||    
T  42067724 acgtttttggtaaataagatttagttattataattataggtgatggaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggattt 42067625  T
Q  435 ggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    |||||||||||||||||||       |||||||||| |||||||||    
T  42067624 ggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 42067579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 45636228 - 45636116
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    |||||||||| | ||||| ||||||| ||||||||||||| ||||||       || ||||||||||| ||||||||||||||||||   ||| ||||||    
T  45636228 tttggtaaataagatttagttattatgattataggtgatagaaaatattttttcctacaaaaaataactcatttaactattaatttaaaaattcggtgta 45636129  T
Q  441 ccaatacactcaa 453  Q
    |||||||||||||    
T  45636128 ccaatacactcaa 45636116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 25592327 - 25592385
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  25592327 cttcaaaaaataacacattaaactattaatttattgatttggtgtatcaatacactcaa 25592385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 29347520 - 29347639
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| ||||||| || | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  29347520 gacgtttttggtagataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaagatt 29347619  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  29347620 tggtgtaccaatacactcaa 29347639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 35171453 - 35171572
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||    ||    
T  35171453 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaagggtt 35171552  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  35171553 tggtgtaccaatacactcaa 35171572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 444
Target Start/End: Original strand, 52082277 - 52082392
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | ||||||||||||||||||||||||||| ||||| |       ||||||||||||||||||||||||||| |||||     
T  52082277 tcgtcgatgtttttgataaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataacacatttaactattgatttaa 52082376  T
Q  429 tcatttggtgtaccaa 444  Q
    | ||||| ||||||||    
T  52082377 tgatttgatgtaccaa 52082392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 45518778 - 45518665
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||||||||||||| || |||| ||| ||||||        ||||||||||||||||||||||||||| ||||||| || |||| |    
T  45518778 tttggtaaataagatttaattattataaataaaggtaatagaaaataacttttctcttcaaaaaataacacatttaactattgatttattgatctggtat 45518679  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  45518678 accaatacactcaa 45518665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 1326999 - 1326897
Alignment:
Q  135 atggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcattgttt 234  Q
    |||||||||  | |||||||||||||||  | || ||||| |||||| | |||||||||| || ||||||||||||||||||| |||||||||| | |||    
T  1326999 atggtacacctataattttgagtgtaccggtacttttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaatgtatttgtcaatattt 1326900  T
Q  235 ata 237  Q
    |||    
T  1326899 ata 1326897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 341 - 480
Target Start/End: Original strand, 42364193 - 42364333
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||| |||||||||| |||||||||| ||||||       | | |||||||||||  |||||||||||||||||   |||||||||    
T  42364193 tttggtaaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataacttatttaactattaatttaaggatttggtgt 42364292  T
Q  440 accaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    ||||||||||||||       |||||||||| |||||||||    
T  42364293 accaatacactcaaattattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 882132 - 882019
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||| |||||||||  || ||| |||||||| || || |||||||||||| | |||||||||| || || ||| || |||||||||| ||||    
T  882132 agggaacttctacggtacactcggaaattttagtgtaccgatacttttgtttcacaaaatttataaattaacgatcatttttataaaataaaaagttatt 882033  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  882032 tgtcaatatttata 882019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 14460438 - 14460397
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14460438 tcattgtttataaggatcatattacaaaatttacattttgtc 14460397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 36019566 - 36019607
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36019566 tcattgtttataaggatcatattacaaaatttacattttgtc 36019607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 42848466 - 42848587
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||| |       || ||||||||||| ||||||||||||||||||   |||    
T  42848466 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatt 42848565  T
Q  434 tggtgt--accaatacactcaa 453  Q
    ||||||  ||||||||||||||    
T  42848566 tggtgtgcaccaatacactcaa 42848587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 44365770 - 44365651
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttc----aaaaaataacacatttaactattaatttattc 430  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||        |||    |||||||||| ||||||||||||||||||       
T  44365770 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttttttcctacaaaaaataactcatttaactattaatttaaga 44365671  T
Q  431 atttggtgtaccaatacact 450  Q
    ||||||||||||||||||||    
T  44365670 atttggtgtaccaatacact 44365651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 44500265 - 44500306
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44500265 tcattgtttataaggatcatattacaaaatttacattttgtc 44500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 44962860 - 44962819
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44962860 tcattgtttataaggatcatattacaaaatttacattttgtc 44962819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 48925561 - 48925602
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  48925561 tcattgtttataaggatcatattacaaaatttacattttgtc 48925602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 51235778 - 51235737
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  51235778 tcattgtttataaggatcatattacaaaatttacattttgtc 51235737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 52782309 - 52782350
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  52782309 tcattgtttataaggatcatattacaaaatttacattttgtc 52782350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 53186261 - 53186220
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  53186261 tcattgtttataaggatcatattacaaaatttacattttgtc 53186220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 32717793 - 32717680
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | |||| |||||||||||||||||||||| |||| |        ||||| ||||||| ||||||||||||||||||||| |||| ||||    
T  32717793 tttggtaaataagatttcattattataattataggtgatagaaaacaatttttctcttcagaaaataatacatttaactattaatttattgatttagtgt 32717694  T
Q  440 accaatacactcaa 453  Q
    |  |||||||||||    
T  32717693 attaatacactcaa 32717680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 38785348 - 38785461
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||| ||| | ||||| |||||||||| |||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||    
T  38785348 tttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtgt 38785447  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  38785448 accaatacactcaa 38785461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 27082670 - 27082725
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||||||||||||    
T  27082670 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaa 27082725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 53376848 - 53376810
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  53376848 tcattgtttataaggatcatattacaaaatttacatttt 53376810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 9322580 - 9322617
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattt 263  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9322580 tcattgtttataaggatcatattacaaaatttacattt 9322617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 32720242 - 32720201
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  32720242 tcattgtttataaggatcatattaaaaaatttacattttgtc 32720201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 35352340 - 35352381
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  35352340 tcattgtttataagtatcatattacaaaatttacattttgtc 35352381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 37567475 - 37567434
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  37567475 tcattgtttataaggatcatattacaaaatttatattttgtc 37567434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 49951074 - 49951115
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  49951074 tcattttttataaggatcatattacaaaatttacattttgtc 49951115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 50465729 - 50465688
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  50465729 tcattgtttataaggatcatattaaaaaatttacattttgtc 50465688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 50560511 - 50560552
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  50560511 tcattgtttataaggatcatattaaaaaatttacattttgtc 50560552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 480
Target Start/End: Complemental strand, 31308958 - 31308877
Alignment:
Q  399 aaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    |||||||||| ||||||||||||||||||   ||||||||| |||||||||||||       |||||||||| |||||||||    
T  31308958 aaaaaataactcatttaactattaatttaaggatttggtgttccaatacactcaaattgttaggtgtaccatagaatttgcc 31308877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 47948654 - 47948771
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttc-aaaaaataacacatttaactattaatttattcat 432  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||| |       || | |||||||||| ||||||||||||||||||   ||    
T  47948654 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataatttttttctacaaaaaaataactcatttaactattaatttaaggat 47948753  T
Q  433 ttggtgtaccaatacact 450  Q
    ||||||||||||| ||||    
T  47948754 ttggtgtaccaatgcact 47948771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 39630150 - 39630270
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaata-nnnnnnncttcaaaaaataacacatttaacta-ttaatttattcat 432  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||        || ||||||||||| |||||||||| ||||||||   ||    
T  39630150 gacgtttttggtaaatcagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactatttaatttaaaaat 39630249  T
Q  433 ttggtgtaccaatacactcaa 453  Q
    | ||||||| |||||||||||    
T  39630250 tcggtgtactaatacactcaa 39630270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 341 - 387
Target Start/End: Complemental strand, 4659896 - 4659850
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaata 387  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||    
T  4659896 tttggtaaataagatttaattattataattataggtgatagaaaata 4659850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 33830787 - 33830749
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  33830787 tcattgtttataagaatcatattacaaaatttacatttt 33830749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 346947 - 346906
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  346947 tcattgtttacaaagatcatattacaaaatttacattttgtc 346906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 881981 - 881944
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattt 263  Q
    |||||||||||||||||||||||| |||||||||||||    
T  881981 tcattgtttataaggatcatattaaaaaatttacattt 881944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 7347347 - 7347306
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  7347347 tcattgtttataaggatcgtattaaaaaatttacattttgtc 7347306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 35320510 - 35320551
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  35320510 tcattgtttataaggatcatattaaaaaattgacattttgtc 35320551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 55365524 - 55365565
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  55365524 tcattgtttataaggatcatattaaaaaatttatattttgtc 55365565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 387
Target Start/End: Original strand, 378985 - 379037
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaata 387  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  378985 gacgtttttggtaaataagatttagttattataattataggtgatagaaaata 379037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 7347437 - 7347385
Alignment:
Q  185 tataaattaaagaccactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    |||||||||| || || ||||||||||||||||||||||||||| | ||||||    
T  7347437 tataaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttata 7347385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 26409782 - 26409821
Alignment:
Q  228 attgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  26409782 attgtttataaggatcatattaaaaaatttaaattttgtc 26409821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 410 - 453
Target Start/End: Original strand, 27079715 - 27079758
Alignment:
Q  410 catttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||   |||||||||||||||||||||||    
T  27079715 catttaactattaatttaaggatttggtgtaccaatacactcaa 27079758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 2667741 - 2667703
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  2667741 tcattatttataaggataatattacaaaatttacatttt 2667703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 2668033 - 2667995
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtacc 162  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  2668033 agggaacttctacggtacactcgcaattttgagtgtacc 2667995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 26885292 - 26885350
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    |||||||||| ||| ||||||||||||||||||   | |||||||||| ||||||||||    
T  26885292 cttcaaaaaacaactcatttaactattaatttaaagaattggtgtaccgatacactcaa 26885350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 48388909 - 48388947
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  48388909 tcattgtttataaagatcatattaaaaaatttacatttt 48388947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 7157188 - 7157229
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  7157188 tcattgtttataaggattatattaaaaaaattacattttgtc 7157229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 45927477 - 45927436
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| |||||||||||||||||| |||||||| ||||||||    
T  45927477 tcattctttataaggatcatattaaaaaatttatattttgtc 45927436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 1e-43; HSPs: 77)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 21835839 - 21835725
Alignment:
Q  124 agggaacttctatggtacactcacaatttt-gagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21835839 agggaacttctatggtacactcacaatttttgagtgtaccagtactcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 21835740  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  21835739 ttgtcaatatttata 21835725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 120 - 237
Target Start/End: Original strand, 14913839 - 14913956
Alignment:
Q  120 aaatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaagg 219  Q
    ||||||||||||||||||| |||||||||||||||||||||||  | ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  14913839 aaatagggaacttctatggcacactcacaattttgagtgtaccggtactcttgttttacaaaatatataaattaaagatcactttaatgaaataaaaagg 14913938  T
Q  220 tatttgtcattgtttata 237  Q
    ||||||||| | ||||||    
T  14913939 tatttgtcaatatttata 14913956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 36835749 - 36835637
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  36835749 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtattt 36835650  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  36835649 gtcaatatttata 36835637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 35037869 - 35037758
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||     
T  35037869 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattta 35037770  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  35037769 tcaatatttata 35037758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 38971870 - 38971759
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    ||||||||||| |||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  38971870 ggaacttctatagtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttg 38971771  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  38971770 tcaatatttata 38971759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 39002968 - 39002857
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    ||||||||||| |||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  39002968 ggaacttctatagtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttg 39002869  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  39002868 tcaatatttata 39002857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 7223888 - 7223778
Alignment:
Q  127 gaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  7223888 gaacttctatggtacactcacaattttgagtgtaccggtactcttgttttacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgt 7223789  T
Q  227 cattgtttata 237  Q
    || | ||||||    
T  7223788 caatatttata 7223778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 43182724 - 43182836
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  43182724 gggaacttctatggtacactcacaattttaagtgtaccggtactcttgtttcacaaaatatataaattaaaaaccactttaatgaaataaaaaagtattt 43182823  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  43182824 gtcaatatttata 43182836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 38627393 - 38627282
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||||||||||||||||||| ||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  38627393 ggaacttctatggtacactcacaattttaagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaagtatttg 38627294  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  38627293 tcaatatttata 38627282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 28896902 - 28897015
Alignment:
Q  122 atagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggta 221  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||| ||||||||  ||||| |||||||||||||||||||||||    
T  28896902 atagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatatataaa--aaagatcactttaatgaaataaaaaggta 28896999  T
Q  222 tttgtcattgtttata 237  Q
    ||||||| | ||||||    
T  28897000 tttgtcaatatttata 28897015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 37766300 - 37766403
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||||||||||||||||||| |||||||||||| |||||   | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  37766300 tagggaacttctatggtacattcacaattttgaatgtactggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtat 37766399  T
Q  223 ttgt 226  Q
    ||||    
T  37766400 ttgt 37766403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 39347385 - 39347509
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaata-nnnnnnncttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||         || ||||||||||||||||||||||||||||||    
T  39347385 tcgtcgacgtttttggtaaatgatatttaattattataattataggtgatataaaatattttttcttttaaaaaaataacacatttaactattaatttat 39347484  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||||  |||||||||||||||||    
T  39347485 tgatttaatgtaccaatacactcaa 39347509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 464655 - 464545
Alignment:
Q  127 gaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    |||||||||||||||| |||||||||||||||||||  |  |||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  464655 gaacttctatggtacattcacaattttgagtgtaccggtattcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgt 464556  T
Q  227 cattgtttata 237  Q
    || | ||||||    
T  464555 caatatttata 464545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 196066 - 196167
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||| ||  | ||||||||||||| | |||||||||||| || ||||||||||||||||||||||||||    
T  196066 gggaacttctatggtacactcacaattttgagtgtgccggtactcttgtttcacataatatataaattaatgatcactttaatgaaataaaaaggtattt 196165  T
Q  225 gt 226  Q
    ||    
T  196166 gt 196167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 310903 - 311004
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||| ||  | ||||||||||||| | |||||||||||| || ||||||||||||||||||||||||||    
T  310903 gggaacttctatggtacactcacaattttgagtgtgccggtactcttgtttcacataatatataaattaatgatcactttaatgaaataaaaaggtattt 311002  T
Q  225 gt 226  Q
    ||    
T  311003 gt 311004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 45401542 - 45401443
Alignment:
Q  138 gtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    |||||||||||||||||| ||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  45401542 gtacactcacaattttgaatgtaccgctactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttata 45401443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 12266073 - 12266183
Alignment:
Q  127 gaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    ||||||||||||||||| ||||||||||||||||||  | |||||||| |||||| | |||||||||| || ||||||||||||||||||||||||||||    
T  12266073 gaacttctatggtacacccacaattttgagtgtaccggtactcttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaggtatttgt 12266172  T
Q  227 cattgtttata 237  Q
    || | ||||||    
T  12266173 caatatttata 12266183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 1426327 - 1426439
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||| |||||||||||||||||||||||||||||||   | |||||||||  |||| |||||||||||| || ||||||||||||||||||||||||||    
T  1426327 gggaaattctatggtacactcacaattttgagtgtactggtactcttgttttgcaaaatatataaattaacgatcactttaatgaaataaaaaggtattt 1426426  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  1426427 gtcaatatttata 1426439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 483
Target Start/End: Complemental strand, 529415 - 529264
Alignment:
Q  333 tcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattca 431  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||||| |||| |        ||||||||||||||||||||||||||||||||||| |    
T  529415 tcgacgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttattga 529316  T
Q  432 tttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
     ||||||||||||||||| |||        ||||||||| ||||||||||||    
T  529315 cttggtgtaccaatacacccaaattttttagtgtaccatagaatttgccata 529264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 45393445 - 45393558
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||  |||||||||||||||||||||| |||||   | ||||||||||| ||| ||||||||||||| | |||||||||||||||||||||||||    
T  45393445 agggaactgatatggtacactcacaattttgaatgtactggtactcttgtttcataaaatatataaattaaatatcactttaatgaaataaaaaggtatt 45393544  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  45393545 tgtcaatatttata 45393558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 16323710 - 16323586
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||| | |||||||||| | |||||||||||||| |||| |        ||||||| ||||||||||||||||||||||||||    
T  16323710 tcgtcgacgtttttggtaaataagatttaattatcacaattataggtgatagaaaacaatttttctcttcaaataataacacatttaactattaatttat 16323611  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | |||||||||||||||||||||||    
T  16323610 tgatttggtgtaccaatacactcaa 16323586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 43049687 - 43049564
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaa-tannnnnnncttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||  |       ||||||||||||||||||||||| |||||||||     
T  43049687 tcgtcgacgtttttggtaaataatatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaac-attaatttaa 43049589  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | |||||||||||||||||| ||||    
T  43049588 tgatttggtgtaccaatacattcaa 43049564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 330 - 452
Target Start/End: Complemental strand, 17642225 - 17642102
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | ||||||||||||||||||||||||||| |||| |        |||||||||||||||||||||||||||||||||     
T  17642225 tcgtcgatgtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttaa 17642126  T
Q  429 tcatttggtgtaccaatacactca 452  Q
    | ||||||||||||||||||||||    
T  17642125 tgatttggtgtaccaatacactca 17642102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 341 - 450
Target Start/End: Complemental strand, 37465824 - 37465714
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||| ||||| | ||||||||||||||||||||||||||| ||||||        ||||||||||||||| ||||||||||||||||||| |||||||||    
T  37465824 tttgataaataagatttaattattataattataggtgataaaaaataatttttctcttcaaaaaataacatatttaactattaatttattgatttggtgt 37465725  T
Q  440 accaatacact 450  Q
    |||||||||||    
T  37465724 accaatacact 37465714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 334 - 452
Target Start/End: Complemental strand, 2273157 - 2273038
Alignment:
Q  334 cgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcat 432  Q
    |||||| |||| ||||| | ||||||||||||||||||||||||||| |||| |        ||| ||||||||||||||||||||||||||||| | ||    
T  2273157 cgacgtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttaaaaaaataacacatttaactattaatttaatgat 2273058  T
Q  433 ttggtgtaccaatacactca 452  Q
    ||||||||||||||||||||    
T  2273057 ttggtgtaccaatacactca 2273038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 42444484 - 42444597
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||| ||||| | |||||||||||||||||||| |||||| ||||||        |||||||||||| |||||||||||||||||||| | |||||||||    
T  42444484 tttgataaataagatttaattattataattataagtgatagaaaataatttttctcttcaaaaaatagcacatttaactattaatttaatgatttggtgt 42444583  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  42444584 accaatacactcaa 42444597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 26439778 - 26439902
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  26439778 tcgtcgacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 26439877  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| ||||||||||| |||||||    
T  26439878 tgattgggtgtaccaatgcactcaa 26439902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 10280706 - 10280587
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||| ||||||||||||||||||||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  10280706 gacgtttttggtaaataagatttagttactataattataggtgatataaaataattttttcctacaaaaaataactcatttaactattaatttaaagatt 10280607  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  10280606 tggtgtaccaatacactcaa 10280587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 341 - 481
Target Start/End: Complemental strand, 28090331 - 28090191
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    |||||||||| | ||||| ||||||||||||||||||||  ||||||       || ||||||||||| ||||||||||||||||||   ||||||||||    
T  28090331 tttggtaaataagatttagttattataattataggtgatggaaaatattttttcctacaaaaaataactcatttaactattaatttaaggatttggtgta 28090232  T
Q  441 ccaatacactcaannnnnnnggtgtaccatggaatttgcca 481  Q
    |||||| ||||||       |||||||||| ||||||||||    
T  28090231 ccaatatactcaaattattgggtgtaccatagaatttgcca 28090191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 43485362 - 43485420
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  43485362 cttcaaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaa 43485420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 4475194 - 4475072
Alignment:
Q  332 gtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattc 430  Q
    |||||||| |||| ||||| | ||||||||||||||||||||| ||||| ||||||        || |||||||||| | |||||||||||||||| ||     
T  4475194 gtcgacgtttttgataaataagatttaattattataattatagatgatagaaaatatttttatttttcaaaaaataatagatttaactattaatttgttg 4475095  T
Q  431 atttggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||||||    
T  4475094 atttggtgtaccaatacactcaa 4475072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 480
Target Start/End: Complemental strand, 29773591 - 29773445
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||  ||||||||||||||||||   |||    
T  29773591 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataaatcatttaactattaatttaaggatt 29773492  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    ||||||||||||||||||||       |||||||||| |||||||||    
T  29773491 tggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 29773445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 336 - 480
Target Start/End: Complemental strand, 37511233 - 37511088
Alignment:
Q  336 acgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcattt 434  Q
    |||| |||||||||| | ||||| ||||||||||||||||||||  ||||||       | | ||||||||||| ||||||||||||||||||   ||||    
T  37511233 acgtttttggtaaataagatttagttattataattataggtgatggaaaatatttttttcctacaaaaaataactcatttaactattaatttaaagattt 37511134  T
Q  435 ggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    |||||||||||||||||||       |||||||||| |||||||||    
T  37511133 ggtgtaccaatacactcaaattgttgggtgtaccatcgaatttgcc 37511088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 38502330 - 38502214
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  38502330 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatt 38502231  T
Q  434 tggtgtaccaatacact 450  Q
    |||||||||||||||||    
T  38502230 tggtgtaccaatacact 38502214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 38803844 - 38803729
Alignment:
Q  122 atagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggta 221  Q
    ||||||||||||||||||||||| | || ||| ||||||||  | ||||||||| |||||   |||||||||| || |||||| ||||||||||||| ||    
T  38803844 atagggaacttctatggtacacttataaattttagtgtaccggtactcttgttttacaaaacttataaattaacgatcacttttatgaaataaaaagcta 38803745  T
Q  222 tttgtcattgtttata 237  Q
    ||||||| | ||||||    
T  38803744 tttgtcaatatttata 38803729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 14498563 - 14498682
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| |||||||||||| |||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  14498563 gacgtttttggtaaataagatttagttattataattacaggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatt 14498662  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  14498663 tggtgtaccaatacactcaa 14498682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 36002502 - 36002383
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  36002502 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatt 36002403  T
Q  434 tggtgtaccaatacactcaa 453  Q
    |||||||| |||||||||||    
T  36002402 tggtgtactaatacactcaa 36002383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 3053207 - 3053094
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||| |||| ||||| || ||| |||||||| || |||||||||||||||   |||||||||| || || ||| ||||||||||||| ||||    
T  3053207 agggaacttctacggtatactcagaaattttagtgtaccgatactcttgtttcacaaaacttataaattaacgatcatttttatgaaataaaaagttatt 3053108  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  3053107 tgtcaatatttata 3053094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 335 - 480
Target Start/End: Complemental strand, 23286711 - 23286565
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||| ||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  23286711 gacgtttttgataaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatt 23286612  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    |||||||||||||||| |||       |||||||||| |||||||||    
T  23286611 tggtgtaccaatacacgcaaattgttaggtgtaccatagaatttgcc 23286565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 335 - 484
Target Start/End: Complemental strand, 34332258 - 34332108
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||  | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  34332258 gacgtttttggtaaaaaagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagaatt 34332159  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccataa 484  Q
    |||||||||||| |||| ||       |||||||||| |||||||||||||    
T  34332158 tggtgtaccaatgcacttaaattattgggtgtaccatagaatttgccataa 34332108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 29039610 - 29039725
Alignment:
Q  122 atagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggta 221  Q
    ||||| || |||||||||||||||| || ||| |||||||| || |||||||||||||||   || ||||||| || || ||| ||||||||||||| ||    
T  29039610 ataggaaatttctatggtacactcagaaattttagtgtaccgatactcttgtttcacaaaacttacaaattaacgatcatttttatgaaataaaaagtta 29039709  T
Q  222 tttgtcattgtttata 237  Q
    ||||||| | ||||||    
T  29039710 tttgtcaatatttata 29039725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 480
Target Start/End: Original strand, 29229438 - 29229583
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| |||||||||||||||| |||| |||  |       || ||||||||||| || |||||||||||||||   ||||    
T  29229438 gacgtttttggtaaataagatttagttattataattataggcgatagaaataattttttcctacaaaaaataactcacttaactattaatttaagaattt 29229537  T
Q  435 ggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    |||||||||||||||||||       |||||||||| |||||||||    
T  29229538 ggtgtaccaatacactcaaatggttgggtgtaccatagaatttgcc 29229583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 36886417 - 36886541
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaa-tannnnnnncttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||  |        ||||||| |||||| |||||| ||||||||||     
T  36886417 tcgtcgacgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttcttttcaaaatataacatatttaattattaatttaa 36886516  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | |||||||||||| ||| ||||||    
T  36886517 taatttggtgtaccgatatactcaa 36886541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 7223740 - 7223699
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7223740 tcattgtttataaggatcatattacaaaatttacattttgtc 7223699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 14913994 - 14914035
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14913994 tcattgtttataaggatcatattacaaaatttacattttgtc 14914035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 28897053 - 28897094
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28897053 tcattgtttataaggatcatattacaaaatttacattttgtc 28897094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 35037720 - 35037679
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35037720 tcattgtttataaggatcatattacaaaatttacattttgtc 35037679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 37766452 - 37766493
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37766452 tcattgtttataaggatcatattacaaaatttacattttgtc 37766493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 38627244 - 38627203
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38627244 tcattgtttataaggatcatattacaaaatttacattttgtc 38627203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 38971721 - 38971680
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38971721 tcattgtttataaggatcatattacaaaatttacattttgtc 38971680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 39002819 - 39002778
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39002819 tcattgtttataaggatcatattacaaaatttacattttgtc 39002778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 360 - 453
Target Start/End: Complemental strand, 946096 - 946003
Alignment:
Q  360 ttattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||| |||  |       || ||||||||||| ||||||||||||||||||   |||||||||||||||||||||||    
T  946096 ttattataattataggtgatagaaataattttttcctacaaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaa 946003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 18844159 - 18844271
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||| |||||||| |||| ||| ||| |||  || ||||||||||||||| | |||||| ||| || || ||| ||||||||||||| |||||    
T  18844159 gggaacttctacggtacacttacaaattttagtatactgatactcttgtttcacaaaatttataaaataacgatcatttttatgaaataaaaagctattt 18844258  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  18844259 gtcaatatttata 18844271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 43921252 - 43921152
Alignment:
Q  354 atttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactca 452  Q
    ||||||||||||||||||||||||||| ||||||        ||| ||||||||| | |||||||||||| || | | ||||||||||||||||||||||    
T  43921252 atttaattattataattataggtgatagaaaataatttttttctttaaaaaataatatatttaactattagttcaatgatttggtgtaccaatacactca 43921153  T
Q  453 a 453  Q
    |    
T  43921152 a 43921152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 399 - 453
Target Start/End: Original strand, 6800097 - 6800151
Alignment:
Q  399 aaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    |||||| |||||||||||||||||||| | | |||||||||||||||||||||||    
T  6800097 aaaaaaaaacacatttaactattaattcaatgatttggtgtaccaatacactcaa 6800151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 19718672 - 19718730
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    |||||||| ||||||||||||| |||||||||| | ||||||||||| |||||||||||    
T  19718672 cttcaaaatataacacatttaattattaatttaatgatttggtgtactaatacactcaa 19718730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 37161650 - 37161531
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||| |       ||  |||||||||| ||||||||||||||||||   |||    
T  37161650 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctataaaaaataactcatttaactattaatttaaggatt 37161551  T
Q  434 tggtgtaccaatacactcaa 453  Q
    || |||||| ||||||||||    
T  37161550 tgatgtacctatacactcaa 37161531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 21835687 - 21835646
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  21835687 tcattgtttataaggatcatattactaaatttacattttgtc 21835646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 27100961 - 27101002
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  27100961 tcattgtttataaggatcatattaaaaaatttacattttgtc 27101002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 43182874 - 43182915
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  43182874 tcattatttataaggatcatattacaaaatttacattttgtc 43182915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 45393596 - 45393637
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  45393596 tcattatttataaggatcatattacaaaatttacattttgtc 45393637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 45401405 - 45401364
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  45401405 tcattatttataaggatcatattacaaaatttacattttgtc 45401364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 15726156 - 15726269
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||| ||| | ||||| |||||||||| |||||||||| ||||||       | | |||||||||||  |||||||||||||||||   |||||||||    
T  15726156 tttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataacttatttaactattaatttaaggatttggtgt 15726255  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  15726256 accaatacactcaa 15726269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 335 - 483
Target Start/End: Complemental strand, 44935045 - 44934896
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||| ||||| | ||||| ||||||||||||||||||||  ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  44935045 gacgtttttgataaataagatttagttattataattataggtgatggaaaatatttttttcctgcaaaaaataactcatttaactattaatttaaggatt 44934946  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
    || |||||||||||| ||||       |||||||||| ||||||| ||||    
T  44934945 tgatgtaccaatacattcaaattgttgggtgtaccatagaatttgtcata 44934896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 464506 - 464468
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  464506 tcattgtttataaggatcatattaaaaaatttacatttt 464468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 29459780 - 29459686
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaata--nnnnnnncttcaaaaaataacacatttaactattaattta 427  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||         || ||||||||||| ||||||||||||||||||    
T  29459780 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttttcctacaaaaaataactcatttaactattaattta 29459686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 423
Target Start/End: Complemental strand, 2731942 - 2731848
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaa 423  Q
    |||||||| | |||||||||| | ||||||||||| ||||||||| ||||| ||||| |       |||||||||||||||| ||||||||||||    
T  2731942 tcgtcgacatttttggtaaataagatttaattattgtaattatagatgatagaaaataatttttctcttcaaaaaataacacttttaactattaa 2731848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 449
Target Start/End: Original strand, 13483222 - 13483271
Alignment:
Q  400 aaaaataacacatttaactattaatttattcatttggtgtaccaatacac 449  Q
    |||||||||||||||| ||||||||||||| ||||| ||| |||||||||    
T  13483222 aaaaataacacatttatctattaatttattgatttgatgtcccaatacac 13483271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 38803691 - 38803650
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  38803691 tcattgtttataaggattatattaaaaaatttacattttgtc 38803650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 27100815 - 27100923
Alignment:
Q  129 acttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtca 228  Q
    |||| |||||||||||||||| ||| |||||||| ||  | |||||| ||||| | |||||| ||  || || ||| ||||||||||||| |||||||||    
T  27100815 acttttatggtacactcacaaattttagtgtaccgatatttttgttttacaaaatttataaaatatcgatcatttttatgaaataaaaagctatttgtca 27100914  T
Q  229 ttgtttata 237  Q
     | ||||||    
T  27100915 atatttata 27100923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 399 - 453
Target Start/End: Complemental strand, 23274703 - 23274649
Alignment:
Q  399 aaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    |||||||||| | ||||||||||||||||   |||||||| ||||||||||||||    
T  23274703 aaaaaataactcctttaactattaatttaaagatttggtgcaccaatacactcaa 23274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 380
Target Start/End: Complemental strand, 39029548 - 39029498
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgata 380  Q
    |||||||||| |||| ||||| | ||||| |||||||||||||||||||||    
T  39029548 tcgtcgacgtttttgataaataaaatttatttattataattataggtgata 39029498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 196216 - 196256
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  196216 tcattgtttataaggatcatatta-aaaatttatattttgtc 196256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 311053 - 311093
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  311053 tcattgtttataaggatcatatta-aaaatttatattttgtc 311093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 3053056 - 3053015
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||||||| ||||||||    
T  3053056 tcattgtttataaggattatattaaaaaatttatattttgtc 3053015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 380
Target Start/End: Complemental strand, 23274769 - 23274724
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgata 380  Q
    ||||| |||||||||| | ||||| |||||||||||||||||||||    
T  23274769 gacgtttttggtaaataagatttagttattataattataggtgata 23274724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 29039763 - 29039803
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  29039763 tcattgtttataaggatcatattaaaaaattta-attttgtc 29039803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 2e-42; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 18922983 - 18922871
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  18922983 gggaacttctatggtacactcacaattttgagtgtactaatactcttgtttcacaaattatataaattaaagatcactttaatgaaataaaaaagtattt 18922884  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  18922883 gtcaatatttata 18922871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 9923478 - 9923365
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  9923478 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 9923379  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  9923378 tgtcaatatttata 9923365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 42039710 - 42039597
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  42039710 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 42039611  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  42039610 tgtcaatatttata 42039597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 45196803 - 45196916
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  45196803 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatt 45196902  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  45196903 tgtcaatatttata 45196916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 332 - 481
Target Start/End: Complemental strand, 18990240 - 18990090
Alignment:
Q  332 gtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattc 430  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||||     
T  18990240 gtcgatgtttttggtaaatgatatttaattattataattataggtgatataaaatattttttctcttcaaaaaataacatatttaactattaatttattg 18990141  T
Q  431 atttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcca 481  Q
    |||||||||||||||||||||||       |||||||||| ||||||||||    
T  18990140 atttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcca 18990090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 3062303 - 3062188
Alignment:
Q  122 atagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggta 221  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||    
T  3062303 atagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatagaaattaaagatcactttaatgaaataaaaagata 3062204  T
Q  222 tttgtcattgtttata 237  Q
    ||||||| | ||||||    
T  3062203 tttgtcaatatttata 3062188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 25867311 - 25867200
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  25867311 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttg 25867212  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  25867211 tcaatatttata 25867200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 24505536 - 24505418
Alignment:
Q  119 taaatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaag 218  Q
    |||| ||||||||| |||||||||||||||||||||||||||||  | ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  24505536 taaaaagggaacttttatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaag 24505437  T
Q  219 gtatttgtcattgtttata 237  Q
    |||||||||| | ||||||    
T  24505436 gtatttgtcaatatttata 24505418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 1282592 - 1282480
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||||||  ||||||||||| || ||||||||||||||||||||||||||    
T  1282592 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaacatataaattaatgatcactttaatgaaataaaaaggtattt 1282493  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  1282492 gtcaatatttata 1282480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 32186422 - 32186535
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||| |||||| |||||||||||||||||||||||||  | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  32186422 agggaatttctatagtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatt 32186521  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  32186522 tgtcaatatttata 32186535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 41715138 - 41715251
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||| |||||  ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  41715138 agggaatttctacagtacactcacaattttgagtgtaccgatactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatt 41715237  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  41715238 tgtcaatatttata 41715251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 47220362 - 47220250
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||||  |||||||| |||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  47220362 tagggaacttct--ggtacacttacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtat 47220265  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  47220264 ttgtcaatatttata 47220250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 336 - 449
Target Start/End: Complemental strand, 30317340 - 30317226
Alignment:
Q  336 acgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcattt 434  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||| ||||    
T  30317340 acgtttttggtaaataaaatttaattattataattataggtgatataaaacaatttttctcttcaaaaaataacacatttaactattaatttattgattt 30317241  T
Q  435 ggtgtaccaatacac 449  Q
    |||||||||||||||    
T  30317240 ggtgtaccaatacac 30317226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 39444373 - 39444260
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||||||||||| ||| | ||||||||||||||   | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  39444373 agggaacttctatggtatacttataattttgagtgtactggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatt 39444274  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  39444273 tgtcaatatttata 39444260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 40946977 - 40947085
Alignment:
Q  129 acttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtca 228  Q
    |||||||| ||| | |||||||||||||||||||  | ||||||||| ||||| |||||||||||| || ||||||||||||||||||||||||||||||    
T  40946977 acttctatcgtatattcacaattttgagtgtaccggtactcttgttttacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtca 40947076  T
Q  229 ttgtttata 237  Q
     | ||||||    
T  40947077 atatttata 40947085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 17335146 - 17335032
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||| | ||||||| ||||||||||||||||||  | |||||||| |||||| | |||||||||| || ||||||||||||||||||| ||||    
T  17335146 tagggaacttcaacggtacacccacaattttgagtgtaccggtactcttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaagtat 17335047  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  17335046 ttgtcaatttttata 17335032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 330 - 452
Target Start/End: Original strand, 45857729 - 45857852
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | ||||||||||||||||||||||||||| |||| |        |||||||||||||||||||||||||||||||||     
T  45857729 tcgtcgatgtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttaa 45857828  T
Q  429 tcatttggtgtaccaatacactca 452  Q
    | ||||||||||||||||||||||    
T  45857829 tgatttggtgtaccaatacactca 45857852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 42902389 - 42902498
Alignment:
Q  128 aacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtc 227  Q
    ||||| || ||||||||||||||||| ||||||||  | ||||| ||||||||| |||||||||||| || |||||||||||||||||||||||||| ||    
T  42902389 aacttatacggtacactcacaattttaagtgtaccggtactcttatttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatttatc 42902488  T
Q  228 attgtttata 237  Q
    | | ||||||    
T  42902489 aatatttata 42902498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 2038092 - 2038207
Alignment:
Q  122 atagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggta 221  Q
    |||||||||||||||||||||  |||||||||||||||||   |  ||||||| |||||| | |||||||||| || |||||||||||||||||||||||    
T  2038092 atagggaacttctatggtacatccacaattttgagtgtacaggtattcttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaggta 2038191  T
Q  222 tttgtcattgtttata 237  Q
    ||| ||| | ||||||    
T  2038192 tttatcaatatttata 2038207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 331 - 483
Target Start/End: Original strand, 44964077 - 44964230
Alignment:
Q  331 cgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttatt 429  Q
    ||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||| |       |||||||||| || | ||||||||||||||||| |    
T  44964077 cgtcgacgtttttgctaaataagatttaattattataattataggtgatataaaataatttttctcttcaaaaaacaaaatatttaactattaatttaat 44964176  T
Q  430 catttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
     ||||| |||||||||||||||||       ||||||||||  |||||||||||    
T  44964177 gatttgttgtaccaatacactcaaatctttaggtgtaccatataatttgccata 44964230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 15091074 - 15090974
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||| ||||||||||||||||||||||||||||   | || || ||||||||| | |||||||||| || ||||||||||||||||||||||||||    
T  15091074 gggaacttttatggtacactcacaattttgagtgtacgg-tactgttatttcacaaaatttataaattaacgatcactttaatgaaataaaaaggtattt 15090976  T
Q  225 gt 226  Q
    ||    
T  15090975 gt 15090974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 41913355 - 41913473
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       || |||||||||||  |||||||||||||||||   ||||    
T  41913355 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttcctacaaaaaataacttatttaactattaatttaaggattt 41913454  T
Q  435 ggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||    
T  41913455 ggtgtaccaatacactcaa 41913473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 43750226 - 43750102
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatat-aaaatannnnnnncttcaaaaaataacacatttaactattaatttat 428  Q
    |||| ||||| |||||| ||| | ||||||||||||||||||||||||||   |||| |       |||||||||||||||||||||||||||||||| |    
T  43750226 tcgtagacgtttttggttaataagatttaattattataattataggtgatgggaaaaaaattttctcttcaaaaaataacacatttaactattaatttgt 43750127  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| |||||||||||||||||||    
T  43750126 tgattgggtgtaccaatacactcaa 43750102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 9915566 - 9915500
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaa 190  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||    
T  9915566 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaa 9915500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 330 - 452
Target Start/End: Original strand, 30936347 - 30936470
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | ||||||||||||||||||||||||||| |||| |        ||||||||||| |||||||||||||||||||||     
T  30936347 tcgtcgatgtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaatcacacatttaactattaatttaa 30936446  T
Q  429 tcatttggtgtaccaatacactca 452  Q
    | |||| |||||||||||||||||    
T  30936447 tgattttgtgtaccaatacactca 30936470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 331 - 453
Target Start/End: Complemental strand, 31482524 - 31482401
Alignment:
Q  331 cgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttatt 429  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||||||| |||  |        ||||||||| ||| ||||||||||||||||| | |    
T  31482524 cgtcgacgtttttggtaaataagatttaattattataattataggtgatagaaagcaatttttctcttcaaaaactaatacatttaactattaattcaat 31482425  T
Q  430 catttggtgtaccaatacactcaa 453  Q
     |||||||||||||||||||||||    
T  31482424 gatttggtgtaccaatacactcaa 31482401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 3910074 - 3909927
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  3910074 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttccctacaaaaaataactcatttaactattaatttaaaaatt 3909975  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcca 481  Q
     |||||||||||||||||||       |||||||||| ||||||||||    
T  3909974 cggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcca 3909927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 332 - 453
Target Start/End: Original strand, 20439072 - 20439194
Alignment:
Q  332 gtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattc 430  Q
    |||||||| |||||| ||| | ||||||||||||||||||||| ||||| |||| |        |||||||||||||||||||||| ||||||||| ||     
T  20439072 gtcgacgtttttggttaataagatttaattattataattatagatgatagaaaacaatttttctcttcaaaaaataacacatttaattattaatttgttg 20439171  T
Q  431 atttggtgtaccaatacactcaa 453  Q
    ||| |||||||||||||||||||    
T  20439172 attgggtgtaccaatacactcaa 20439194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 47068968 - 47069060
Alignment:
Q  131 ttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||||||| || ||||||||  | ||||||||||||||| | || ||||||| || ||||||||||||||||||||||||||    
T  47068968 ttctatggtacactcacaatcttaagtgtaccggtactcttgtttcacaaaattta-aaattaacgatcactttaatgaaataaaaaggtattt 47069060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 38129651 - 38129764
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||    
T  38129651 tttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaaaatttggtgt 38129750  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  38129751 accaatacactcaa 38129764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 332 - 447
Target Start/End: Complemental strand, 11486145 - 11486029
Alignment:
Q  332 gtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattc 430  Q
    |||||||| |||| ||||| | |||| ||||||||||||||| |||||| |||| |        ||||||||||||||||||||||||||||||||| |     
T  11486145 gtcgacgtttttgataaataagatttgattattataattatatgtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttaatg 11486046  T
Q  431 atttggtgtaccaatac 447  Q
    |||||||||||||||||    
T  11486045 atttggtgtaccaatac 11486029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 30862935 - 30862819
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  30862935 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatt 30862836  T
Q  434 tggtgtaccaatacact 450  Q
    |||||||||||||||||    
T  30862835 tggtgtaccaatacact 30862819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 41809352 - 41809229
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttatt 429  Q
    ||||||| || |||| ||||| | ||||| ||||||||||||||| ||||| |||  |       ||||||||||||| ||||||||||| ||||||| |    
T  41809352 tcgtcgatgtttttgataaataagatttagttattataattatagatgatagaaacaatttttctcttcaaaaaataatacatttaactactaatttaat 41809253  T
Q  430 catttggtgtaccaatacactcaa 453  Q
     |||||||||||||||||||||||    
T  41809252 gatttggtgtaccaatacactcaa 41809229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 452
Target Start/End: Complemental strand, 42975046 - 42974923
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | ||||||||||||||||||||||||||| |||| |        | ||||||||||||||||||||||| |||||||     
T  42975046 tcgtcgatgtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcatcaaaaaataacacatttaactactaatttaa 42974947  T
Q  429 tcatttggtgtaccaatacactca 452  Q
    | ||||||||||||||| ||||||    
T  42974946 tgatttggtgtaccaatgcactca 42974923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 43069230 - 43069107
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt--caaaaaataacacatttaactattaattta 427  Q
    |||||||||| |||| ||||| | ||||||||||||||||||||||||||| |||| |       ||   |||||||||||||||||  |||||||||||    
T  43069230 tcgtcgacgtttttgataaataagatttaattattataattataggtgataaaaaacaattttttctctccaaaaaataacacattt--ctattaattta 43069133  T
Q  428 ttcatttggtgtaccaatacactcaa 453  Q
     | |||||||||||||||||||||||    
T  43069132 ataatttggtgtaccaatacactcaa 43069107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 1691252 - 1691370
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| |||  |       || ||||||||||| ||||||||||||||||||   ||||    
T  1691252 gacgtttttggtaaataagatttagttattataattataggtgatagaaataattttttcctacaaaaaataactcatttaactattaatttaaggattt 1691351  T
Q  435 ggtgtaccaatacactcaa 453  Q
    | |||||||||||||||||    
T  1691352 gatgtaccaatacactcaa 1691370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 40942022 - 40941902
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn--cttcaaaaaataacacatttaactattaatttattcat 432  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||         || ||||||||||| ||||||||||||||||||   ||    
T  40942022 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttttcctacaaaaaataactcatttaactattaatttaaagat 40941923  T
Q  433 ttggtgtaccaatacactcaa 453  Q
    || ||||||||||||||||||    
T  40941922 tttgtgtaccaatacactcaa 40941902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 345 - 481
Target Start/End: Complemental strand, 27956513 - 27956376
Alignment:
Q  345 gtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaa-tttattcatttggtgtacca 443  Q
    |||||| | ||||| ||||||||||||||||||||| ||||||       || ||||||||||| |||||||||||||| ||||   |||||||||||||    
T  27956513 gtaaataagatttagttattataattataggtgatagaaaatattttttcctacaaaaaataactcatttaactattaattttaaagatttggtgtacca 27956414  T
Q  444 atacactcaannnnnnnggtgtaccatggaatttgcca 481  Q
    ||| ||||||       |||||||||| ||||||||||    
T  27956413 atatactcaaattgttaggtgtaccatagaatttgcca 27956376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 30623987 - 30624102
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatata--aaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggt 437  Q
    |||||||||| | ||||| |||||||||||||||||||||||  |||||       | | ||||||||||| ||||||||||||||||||   |||||||    
T  30623987 tttggtaaataagatttagttattataattataggtgatatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaaaatttggt 30624086  T
Q  438 gtaccaatacactcaa 453  Q
    ||||||||||||||||    
T  30624087 gtaccaatacactcaa 30624102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 7574116 - 7574226
Alignment:
Q  127 gaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    ||||||||| |||||||||| || ||| ||||||||| | |||||||||||||||   |||||||||| || || ||| ||||||||||||  |||||||    
T  7574116 gaacttctacggtacactcaaaaattttagtgtaccagtactcttgtttcacaaaacttataaattaacgatcatttttatgaaataaaaatttatttgt 7574215  T
Q  227 cattgtttata 237  Q
    || | ||||||    
T  7574216 caatatttata 7574226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 41381643 - 41381524
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaata-nnnnnnncttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| ||||||| || | ||||||||||||||||||||||||||| ||||||        || ||||||||||| ||||||||||||| ||||   |||    
T  41381643 gacgtttttggtagataagatttaattattataattataggtgatagaaaatattttttttctacaaaaaataactcatttaactattactttaaagatt 41381544  T
Q  434 tggtgtaccaatacactcaa 453  Q
    || |||||||||||||||||    
T  41381543 tgatgtaccaatacactcaa 41381524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 330 - 448
Target Start/End: Original strand, 46836839 - 46836958
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||| | ||||||||||||||||| ||| ||||| ||||| |       |||||||||||| ||||||| |||| ||||||||    
T  46836839 tcgtcgacgtttttggtaaataaaatttaattattataattgtagatgatagaaaatgacatttttcttcaaaaaatatcacatttgactactaatttat 46836938  T
Q  429 tcatttggtgtaccaataca 448  Q
    | ||||| | ||||||||||    
T  46836939 tgatttgatataccaataca 46836958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 9923327 - 9923286
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9923327 tcattgtttataaggatcatattacaaaatttacattttgtc 9923286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 18922833 - 18922792
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18922833 tcattgtttataaggatcatattacaaaatttacattttgtc 18922792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 24505380 - 24505339
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24505380 tcattgtttataaggatcatattacaaaatttacattttgtc 24505339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 42039559 - 42039518
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42039559 tcattgtttataaggatcatattacaaaatttacattttgtc 42039518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 47220212 - 47220171
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  47220212 tcattgtttataaggatcatattacaaaatttacattttgtc 47220171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 28326763 - 28326708
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||||||||||||    
T  28326763 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaa 28326708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 33704505 - 33704580
Alignment:
Q  148 aattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||| | | ||||||||||||||| | ||||||| || || ||| |||||||||||||||||||||    
T  33704505 aattttgagtgtacgagtactcttgtttcacaaaatttataaatgaacgatcaccttaatgaaataaaaaggtatt 33704580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 42711077 - 42710961
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||  | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  42711077 gacgtttttggtaaaaaagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagaatt 42710978  T
Q  434 tggtgtaccaatacact 450  Q
    |||||||||||| ||||    
T  42710977 tggtgtaccaatgcact 42710961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 39444222 - 39444181
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  39444222 tcattgtttataaggatcatattaaaaaatttacattttgtc 39444181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 41715291 - 41715332
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  41715291 tcattgtttataaggatcatattaaaaaatttacattttgtc 41715332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 8770695 - 8770739
Alignment:
Q  404 ataacacatttaactattaatttattcatttggtgtaccaataca 448  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  8770695 ataacacatttaactattaatttaatgatttggtgtaccaataca 8770739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 21699552 - 21699665
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||  |        || |||||||| || ||||||||||||||||||   ||||    
T  21699552 gacgtttttggtaaataagatttagttattataattataggtgatagaa--tttttttttctacaaaaaatgactcatttaactattaatttaaggattt 21699649  T
Q  435 ggtgtaccaatacact 450  Q
    ||||||||||||||||    
T  21699650 ggtgtaccaatacact 21699665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 27426830 - 27426767
Alignment:
Q  131 ttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaa 194  Q
    ||||| ||||||||||||| |||||||||||| || ||||| ||||||||| | ||||||||||    
T  27426830 ttctacggtacactcacaaatttgagtgtaccgattctcttatttcacaaaatttataaattaa 27426767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 41331811 - 41331756
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||| |||||||||||| |||||   |||||||||||||||||||||||    
T  41331811 caaaaaataactcatttaactattgatttaaggatttggtgtaccaatacactcaa 41331756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 3062150 - 3062109
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  3062150 tcattgtttataagaatcatattacaaaatttatattttgtc 3062109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 15090925 - 15090884
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  15090925 tcattgtttataagtatcatattaaaaaatttacattttgtc 15090884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 25867162 - 25867121
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  25867162 tcattgtttgtaaggatcatattaaaaaatttacattttgtc 25867121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 27130693 - 27130734
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  27130693 tcattgtttataaggattatattaaaaaatttacattttgtc 27130734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 32186575 - 32186616
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  32186575 tcattgttcataaggatcatattaaaaaatttacattttgtc 32186616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 40947123 - 40947164
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  40947123 tcattgtttataaggatcatactaaaaaatttacattttgtc 40947164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 396 - 443
Target Start/End: Complemental strand, 34118565 - 34118517
Alignment:
Q  396 ttcaaaaaataacacatttaactattaatttattcatttg-gtgtacca 443  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  34118565 ttcaaaaaataacacatttagctattaatttattgatttgagtgtacca 34118517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 47748055 - 47748181
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn---cttcaaaaaataacacatttaactattaattt 426  Q
    ||||||| || |||||||||  | ||||| ||||||||||||||||||||| | ||||          |||||||||||||| |||||||||||||||||    
T  47748055 tcgtcgatgtttttggtaaaaaagatttagttattataattataggtgatagagaatattatttttttcttcaaaaaataactcatttaactattaattt 47748154  T
Q  427 attcatttggtgtaccaatacactcaa 453  Q
    |   | ||||| |||||||||| ||||    
T  47748155 aaggacttggtataccaatacattcaa 47748181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 7574264 - 7574302
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  7574264 tcattgtttataaggatcatattaaaaaatttatatttt 7574302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 2038245 - 2038286
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  2038245 tcattgtttataaggattatattaaaaaaattacattttgtc 2038286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 42902536 - 42902577
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  42902536 tcattatttataaggaacatattaaaaaatttacattttgtc 42902577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 44963823 - 44963923
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||| ||||||||   |||||||  | |||||  |||| ||||| ||||||||||  | || ||| ||||||||||||| |||||    
T  44963823 gggaacttctatggtacacccacaatttaaggtgtaccggtactcttacttcaaaaatt-tataaattaactatcatttttatgaaataaaaagttattt 44963921  T
Q  225 gt 226  Q
    ||    
T  44963922 gt 44963923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 1e-40; HSPs: 84)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 120 - 237
Target Start/End: Complemental strand, 19636047 - 19635930
Alignment:
Q  120 aaatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaagg 219  Q
    |||| |||||||||||||||||||||||||||||||||||||| || || |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  19636047 aaatggggaacttctatggtacactcacaattttgagtgtaccgatacttttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaagg 19635948  T
Q  220 tatttgtcattgtttata 237  Q
    ||||||||| | ||||||    
T  19635947 tatttgtcaatatttata 19635930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 120 - 237
Target Start/End: Complemental strand, 19834640 - 19834523
Alignment:
Q  120 aaatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaagg 219  Q
    |||| |||||||||||||||||||||||||||||||||||||| || || |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  19834640 aaatggggaacttctatggtacactcacaattttgagtgtaccgatacttttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaagg 19834541  T
Q  220 tatttgtcattgtttata 237  Q
    ||||||||| | ||||||    
T  19834540 tatttgtcaatatttata 19834523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 16814850 - 16814963
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  16814850 agggaacttctatgatacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 16814949  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  16814950 tgtcaatatttata 16814963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 16854130 - 16854243
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  16854130 agggaacttctatgatacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 16854229  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  16854230 tgtcaatatttata 16854243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 37725959 - 37725846
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  37725959 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaactaaagatcactttaatgaaataaaaaggtatt 37725860  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  37725859 tgtcaatatttata 37725846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 40533659 - 40533546
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  40533659 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatt 40533560  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  40533559 tgtcaatatttata 40533546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 2316838 - 2316950
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  2316838 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtattt 2316937  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  2316938 gtcaatatttata 2316950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 5084835 - 5084951
Alignment:
Q  121 aatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggt 220  Q
    |||||||||||||||| ||||||||| |||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  5084835 aatagggaacttctatcgtacactcataattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggt 5084934  T
Q  221 atttgtcattgtttata 237  Q
    |||||||| | ||||||    
T  5084935 atttgtcaatatttata 5084951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 18576300 - 18576412
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||| |||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  18576300 gggaacttttatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 18576399  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  18576400 gtcaatatttata 18576412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 28394474 - 28394363
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  28394474 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatttg 28394375  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  28394374 tcaatatttata 28394363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 13568211 - 13568324
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | || |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13568211 agggaacttctatggtacactcacaattttgagtgtaccggtactgttgttttacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 13568310  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  13568311 tgtcaatatttata 13568324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 3723941 - 3724053
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  3723941 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaagtattt 3724040  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  3724041 gtcaatatttata 3724053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 36947482 - 36947594
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||| ||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  36947482 gggaatttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaagtattt 36947581  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  36947582 gtcaatatttata 36947594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 10711685 - 10711571
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||||||||||||| |||||||||||||||||| ||||||  | ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||    
T  10711685 tagggaacttctattgtacactcacaattttgaatgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaaagaaataaaaaggtat 10711586  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  10711585 ttgtcaatatttata 10711571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 21836690 - 21836580
Alignment:
Q  127 gaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| || ||||||||||||||||||| |||||| |    
T  21836690 gaacttctatggtacactcacaattttgagtgtaccggtgctcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaatgtattttt 21836591  T
Q  227 cattgtttata 237  Q
    || | ||||||    
T  21836590 caatatttata 21836580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 35292920 - 35292806
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||||||||||||||||||||||| ||||||||  | ||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||    
T  35292920 tagggaacttctatggtacactcacaattttaagtgtaccggtactcttgtttcataaaatatataaattaaatatcactttaatgaaataaaaaggtat 35292821  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  35292820 ttgtcaatatttata 35292806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 7504019 - 7504134
Alignment:
Q  122 atagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggta 221  Q
    |||||||||||||||||||||| ||||||||||||||||||  | |||||||| |||||| | |||||||||| || |||||||||||||||||||||||    
T  7504019 atagggaacttctatggtacacccacaattttgagtgtaccggtactcttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaggta 7504118  T
Q  222 tttgtcattgtttata 237  Q
    ||||||| | ||||||    
T  7504119 tttgtcaatatttata 7504134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 330 - 451
Target Start/End: Complemental strand, 40370616 - 40370494
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||    
T  40370616 tcgtcgacgtttttggtaaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataacacatttaactattaatttat 40370517  T
Q  429 tcatttggtgtaccaatacactc 451  Q
    | ||||||| |||||||||||||    
T  40370516 tgatttggtttaccaatacactc 40370494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 6657853 - 6657740
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||| || |||||||||||||||  | |||||||| |||||| | |||||||||| || |||||||||||||||||||||||||    
T  6657853 agggaacttctatggtacacccataattttgagtgtaccggtactcttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaggtatt 6657754  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  6657753 tgtcaatatttata 6657740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 36049464 - 36049576
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||||| |||||||||||||||||||  | ||||||||| ||||| | ||||||||||  | ||||||||||||||||||||||||||    
T  36049464 gggaacttctatggtacattcacaattttgagtgtaccggtactcttgttttacaaaatttataaattaataatcactttaatgaaataaaaaggtattt 36049563  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  36049564 gtcaatatttata 36049576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 36191968 - 36192082
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||| |||||||||||| | | |||||||||||||||  | || |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  36191968 tagggaatttctatggtacatttataattttgagtgtaccggtacttttgttttacaaaatatataaattaaagatcactttaatgaaataaaaaggtat 36192067  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  36192068 ttgtcaatatttata 36192082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 39878917 - 39879031
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||||||||||||||||||| |||||||||||||||||||  | || |||||  ||||| | |||||||||| || ||||||||||||||||||||||||    
T  39878917 tagggaacttctatggtacattcacaattttgagtgtaccggtacttttgttgtacaaaatttataaattaacgatcactttaatgaaataaaaaggtat 39879016  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  39879017 ttgtcaatatttata 39879031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 45555786 - 45555677
Alignment:
Q  128 aacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtc 227  Q
    |||||||| ||||||||||||| ||||||||||||  | ||||| ||||||||| |||||||||||| || |||||||||||||||||||||||||| ||    
T  45555786 aacttctacggtacactcacaactttgagtgtaccggtactcttatttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatttatc 45555687  T
Q  228 attgtttata 237  Q
    | | ||||||    
T  45555686 aatatttata 45555677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 330 - 450
Target Start/End: Original strand, 6438430 - 6438551
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | |||||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||     
T  6438430 tcgtcgatgtttttgataaataagatttaattattataattataggtgatataaaacaatttttctcttcaaaaaataacacatttaactattaatttaa 6438529  T
Q  429 tcatttggtgtaccaatacact 450  Q
    | ||||||||||||||||||||    
T  6438530 tgatttggtgtaccaatacact 6438551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 18008956 - 18009055
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    ||||||||||||||||||| |||||||||||||||||  | ||||||||||||||| | || ||||||| || |||||||||||||||||||||||||||    
T  18008956 ggaacttctatggtacacttacaattttgagtgtaccggtactcttgtttcacaaaattta-aaattaacgatcactttaatgaaataaaaaggtatttg 18009054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 483
Target Start/End: Complemental strand, 5092142 - 5091994
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       || ||||||||||| ||||||||||||||||||   ||||    
T  5092142 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttcctacaaaaaataactcatttaactattaatttaaggattt 5092043  T
Q  435 ggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
    |||||||||||||||||||       | |||||||| ||||||||||||    
T  5092042 ggtgtaccaatacactcaaattgttagatgtaccatagaatttgccata 5091994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 341 - 484
Target Start/End: Complemental strand, 12547504 - 12547360
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||| ||||| | ||||||||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||| | |||||||||    
T  12547504 tttgataaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataacacatttaactattaatttaatgatttggtgt 12547405  T
Q  440 accaatacactcaannnnnnnggtgtaccatggaatttgccataa 484  Q
    | |||||||||||        |||||||||| |||||||||||||    
T  12547404 atcaatacactcatatctttgggtgtaccatagaatttgccataa 12547360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 330 - 480
Target Start/End: Original strand, 6513519 - 6513670
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||| | |||||||||| | ||||||||| |||| |||| |        ||||||||||||||||||||||||||||||||||    
T  6513519 tcgtcgacgtttttggtaaataagatttaattatcacaattataggagatagaaaacaattttactcttcaaaaaataacacatttaactattaatttat 6513618  T
Q  429 tcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    | |||| ||||||||||||||||||       |||||||||| |||||||||    
T  6513619 tgatttagtgtaccaatacactcaaatctttaggtgtaccatagaatttgcc 6513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 332 - 444
Target Start/End: Complemental strand, 7467276 - 7467163
Alignment:
Q  332 gtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattc 430  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||| |||| |        ||||||||||||||| |||||||||||||||||||     
T  7467276 gtcgacgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacagatttaactattaatttattg 7467177  T
Q  431 atttggtgtaccaa 444  Q
    ||||||||||||||    
T  7467176 atttggtgtaccaa 7467163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 33423741 - 33423833
Alignment:
Q  134 tatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    |||||||| |||||||||||||||||||   | ||||||||||| ||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  33423741 tatggtaccctcacaattttgagtgtactggtactcttgtttcataaaatatataaattaaagaacactttaatgaaataaaaaagtatttgt 33423833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 36489498 - 36489385
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||||||||||||||||||| ||||| ||||||        ||||||||||||| ||||||||||||||||||||| |||| ||||    
T  36489498 tttggtaaataaaatttaattattataattatagatgatagaaaataatttttctcttcaaaaaataatacatttaactattaatttattgatttagtgt 36489399  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  36489398 accaatacactcaa 36489385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 5420354 - 5420254
Alignment:
Q  354 atttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactca 452  Q
    ||||||||||||||||||||||||||| ||||||        |||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  5420354 atttaattattataattataggtgatagaaaataatttttctcttcaaaaaatagcacatttaactattaatttaatgatttggtgtaccaatacactca 5420255  T
Q  453 a 453  Q
    |    
T  5420254 a 5420254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 34438451 - 34438565
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaa-aataacacatttaactattaatttattcatttggtg 438  Q
    |||||||||| | ||||||||||||||||||||||||||| |||| |        |||||||| ||||||||||||||||||||||||||| ||||||||    
T  34438451 tttggtaaataagatttaattattataattataggtgatagaaaacaacttttctcttcaaaaaaataacacatttaactattaatttattgatttggtg 34438550  T
Q  439 taccaatacactcaa 453  Q
    | |||||||||||||    
T  34438551 ttccaatacactcaa 34438565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 1860334 - 1860222
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||| ||||| ||||||||||||||||||  | ||||| || |||||| | ||||||||||  | ||||||||||||||||||||||||||    
T  1860334 gggaacttctatgatacacccacaattttgagtgtaccggtactcttattgcacaaaatttataaattaacaatcactttaatgaaataaaaaggtattt 1860235  T
Q  225 gtcattgtttata 237  Q
     ||| | ||||||    
T  1860234 atcaatatttata 1860222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 11813456 - 11813576
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn--cttcaaaaaataacacatttaactattaatttattcat 432  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||         || ||||||||||||||||||||||||||||||   ||    
T  11813456 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttttcctacaaaaaataacacatttaactattaatttaaggat 11813555  T
Q  433 ttggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||||    
T  11813556 ttggtgtaccaatacactcaa 11813576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 330 - 450
Target Start/End: Original strand, 20212409 - 20212529
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | |||||||||||||||||||||||||| ||||| |        |||||||||||||||||||||||||||||||| |    
T  20212409 tcgtcgacgtttttggttaataagatttaattattataattataggtgatgtaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 20212508  T
Q  429 tcatttggtgtaccaatacact 450  Q
    | | ||||||||||||||||||    
T  20212509 tga-ttggtgtaccaatacact 20212529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 11598266 - 11598142
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||| ||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  11598266 tcgtagacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 11598167  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| |||||||||||||||||||    
T  11598166 tgattgggtgtaccaatacactcaa 11598142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 4673862 - 4673981
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  4673862 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagaatt 4673961  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  4673962 tggtgtaccaatacactcaa 4673981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 5389461 - 5389580
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  5389461 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaagtatt 5389560  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  5389561 tggtgtaccaatacactcaa 5389580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 6884305 - 6884186
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  6884305 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatt 6884206  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  6884205 tggtgtaccaatacactcaa 6884186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 34665717 - 34665598
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  34665717 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatt 34665618  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  34665617 tggtgtaccaatacactcaa 34665598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 41840062 - 41839949
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||  || |||||||||||||||  | ||||||||  || || | |||||||||| || |||||||||||||||||||||||||    
T  41840062 agggaacttctatggtacatccataattttgagtgtaccggtactcttgttgtaccaaatttataaattaacgatcactttaatgaaataaaaaggtatt 41839963  T
Q  224 tgtcattgtttata 237  Q
    | ||| | ||||||    
T  41839962 tatcaatatttata 41839949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 26738439 - 26738327
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||| |||||||||  || |||||| ||||||||  | |||||||| |||||| | |||||||||| || || |||||||||||||||||||||||    
T  26738439 gggaacttttatggtacatccataattttaagtgtaccggtactcttgttgcacaaaatttataaattaacgatcattttaatgaaataaaaaggtattt 26738340  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  26738339 gtcaatatttata 26738327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 37909530 - 37909406
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||| ||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  37909530 tcgtagacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 37909431  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| ||||||| |||||||||||    
T  37909430 tgattgggtgtactaatacactcaa 37909406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 11227773 - 11227654
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | |||||||||||  |||||||||||||||||   |||    
T  11227773 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataacttatttaactattaatttaaggatt 11227674  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  11227673 tggtgtaccaatacactcaa 11227654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 19636419 - 19636477
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  19636419 cttcaaaaaataacatatttaactattaatttattgatctggtgtaccaatacactcaa 19636477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 19835012 - 19835070
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  19835012 cttcaaaaaataacatatttaactattaatttattgatctggtgtaccaatacactcaa 19835070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 3383454 - 3383566
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    |||||||||| | |||||||||||||| |||||||||||| |||  |       || |||||||| || ||||||||||||||||||   ||||||||||    
T  3383454 tttggtaaataagatttaattattatagttataggtgatagaaataattttttcctacaaaaaatcactcatttaactattaatttaaggatttggtgta 3383553  T
Q  441 ccaatacactcaa 453  Q
    |||||||||||||    
T  3383554 ccaatacactcaa 3383566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 341 - 448
Target Start/End: Original strand, 14533088 - 14533196
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||    
T  14533088 tttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtgt 14533187  T
Q  440 accaataca 448  Q
    |||||||||    
T  14533188 accaataca 14533196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 42427831 - 42427947
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||| |       || |||||||||||  |||||||||||||||||   |||    
T  42427831 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataacttatttaactattaatttaaggatt 42427930  T
Q  434 tggtgtaccaatacact 450  Q
    |||||||||||||||||    
T  42427931 tggtgtaccaatacact 42427947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 330 - 380
Target Start/End: Complemental strand, 32499297 - 32499247
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgata 380  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  32499297 tcgtcgacgtttttgataaatgatatttaattattataattataggtgata 32499247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 38963324 - 38963443
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttc-aaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       || | |||||||||| ||||||||||||||||||   |||    
T  38963324 gacgtttttggtaaataagatttagttattataattataggtgataaaaaatatttttttctacaaaaaaataacccatttaactattaatttaaggatt 38963423  T
Q  434 tggtgtaccaatacactcaa 453  Q
    || |||||||||||| ||||    
T  38963424 tgatgtaccaatacattcaa 38963443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 2316988 - 2317029
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2316988 tcattgtttataaggatcatattacaaaatttacattttgtc 2317029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 5084989 - 5085030
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5084989 tcattgtttataaggatcatattacaaaatttacattttgtc 5085030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 13568362 - 13568403
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13568362 tcattgtttataaggatcatattacaaaatttacattttgtc 13568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 19635892 - 19635851
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19635892 tcattgtttataaggatcatattacaaaatttacattttgtc 19635851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 19834485 - 19834444
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19834485 tcattgtttataaggatcatattacaaaatttacattttgtc 19834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 36192120 - 36192161
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36192120 tcattgtttataaggatcatattacaaaatttacattttgtc 36192161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 36947632 - 36947673
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36947632 tcattgtttataaggatcatattacaaaatttacattttgtc 36947673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 37725808 - 37725767
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37725808 tcattgtttataaggatcatattacaaaatttacattttgtc 37725767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 40533508 - 40533467
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40533508 tcattgtttataaggatcatattacaaaatttacattttgtc 40533467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 16815001 - 16815039
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16815001 tcattgtttataaggatcatattacaaaatttacatttt 16815039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 16854281 - 16854319
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16854281 tcattgtttataaggatcatattacaaaatttacatttt 16854319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 3724091 - 3724132
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  3724091 tcattatttataaggatcatattacaaaatttacattttgtc 3724132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 10711534 - 10711493
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  10711534 tcattgtttataaggatcatattacaaaatttatattttgtc 10711493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 18009104 - 18009145
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  18009104 tcattgtttataaggatcatattaaaaaatttacattttgtc 18009145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 33423274 - 33423395
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactat--taatttattca 431  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||| |       || ||||||||||| |||||||||||  |||||||   |    
T  33423274 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataatttttttctacaaaaaataactcatttaactattataatttaagga 33423373  T
Q  432 tttggtgtaccaatacactcaa 453  Q
    ||||||||||||||||| ||||    
T  33423374 tttggtgtaccaatacattcaa 33423395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 35292767 - 35292726
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  35292767 tcattggttataaggatcatattacaaaatttacattttgtc 35292726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 450
Target Start/End: Complemental strand, 37083335 - 37083238
Alignment:
Q  354 atttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgtaccaatacact 450  Q
    ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   ||| ||||||||||||||||    
T  37083335 atttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacact 37083238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 59002 - 58947
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||| ||||||||||||||||||   ||||| |||||||||||||||||    
T  59002 caaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaa 58947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 413 - 481
Target Start/End: Complemental strand, 32499217 - 32499149
Alignment:
Q  413 ttaactattaatttattcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcca 481  Q
    ||||||||||||||||| |||||||||| ||||||||||||       |||||||||| ||||||||||    
T  32499217 ttaactattaatttattgatttggtgtatcaatacactcaaattctttggtgtaccatagaatttgcca 32499149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 43690286 - 43690328
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataa 383  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  43690286 tttggtaaataaaatttaattattataattataggtgatataa 43690328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 14820150 - 14820109
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  14820150 tcattgtttataaagatcatattaaaaaatttacattttgtc 14820109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 18576450 - 18576491
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  18576450 tcattgtttataagaatcatattataaaatttacattttgtc 18576491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 21425617 - 21425504
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||| || |||||| | | || ||| |||||||| || |||||||||||||||   |||||||||| || || |||  |||||||||||| ||||    
T  21425617 agggaacttttacggtacaattagaaattttagtgtaccgatactcttgtttcacaaaacttataaattaacgatcatttttgtgaaataaaaagttatt 21425518  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  21425517 tgtcaatatttata 21425504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 33423882 - 33423923
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  33423882 tcattatttataaggatcatattaaaaaatttacattttgtc 33423923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 36049614 - 36049655
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  36049614 tcattgtttataaggatcatattaaaaaattgacattttgtc 36049655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 44068421 - 44068328
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaa 216  Q
    ||||||||||||| |||||||||| || ||| |||||| | || ||||||||| ||||| | |||||||||| || || ||| || ||||||||    
T  44068421 tagggaacttctacggtacactcagaaattttagtgtatcgatactcttgttttacaaaatttataaattaacgatcatttttataaaataaaa 44068328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 45555639 - 45555598
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  45555639 tcattatttataaggatcatattaaaaaatttacattttgtc 45555598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 1353652 - 1353600
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaata 387  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  1353652 gacgtttttggtaaataagatttagttattataattataggtgatagaaaata 1353600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 387
Target Start/End: Original strand, 3810728 - 3810774
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaata 387  Q
    |||||||||| | ||||||||||||||||||||| ||||| ||||||    
T  3810728 tttggtaaataagatttaattattataattatagatgatagaaaata 3810774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 1860184 - 1860143
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  1860184 tcattgtttataaggattatattaaaaaaattacattttgtc 1860143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 21425466 - 21425426
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  21425466 tcattgtttacaaggatcatatta-aaaatttacattttgtc 21425426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 28394325 - 28394284
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| ||||||||||||||| || |||||||||||||||||    
T  28394325 tcattatttataaggatcatactaaaaaatttacattttgtc 28394284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 1e-40; HSPs: 123)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 47860754 - 47860867
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||||||||||||||||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47860754 agggaacttctatggtacactcacaattttgagtgtatcggtactcttgtttcacaaattatataaattaaagaccaccttaatgaaataaaaaggtatt 47860853  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  47860854 tgtcaatatttata 47860867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 10061565 - 10061461
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  10061565 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 10061466  T
Q  224 tgtca 228  Q
    |||||    
T  10061465 tgtca 10061461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 31570972 - 31571083
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  31570972 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttg 31571071  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  31571072 tcaatatttata 31571083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 3150183 - 3150297
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||||||||||||||||||||||||||||||||||||| |  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  3150183 tagggaacttctatggtacactcacaattttgagtgtatcggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtat 3150282  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  3150283 ttgtcaatatttata 3150297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 49289223 - 49289341
Alignment:
Q  119 taaatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaag 218  Q
    |||| |||||| ||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||     
T  49289223 taaaaagggaatttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaa 49289322  T
Q  219 gtatttgtcattgtttata 237  Q
    |||||||||| | ||||||    
T  49289323 gtatttgtcaatatttata 49289341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 33828863 - 33828976
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||| ||||||||  | ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  33828863 agggaacttctatggtacactcacaattttaagtgtaccggtactcttgttttacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 33828962  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  33828963 tgtcaatatttata 33828976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 33839103 - 33838990
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||| ||||||||  | ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  33839103 agggaacttctatggtacactcacaattttaagtgtaccggtactcttgttttacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 33839004  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  33839003 tgtcaatatttata 33838990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 39853367 - 39853254
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  39853367 agggaacttctatggtacactcataattttgagtgtaccggtactcttgtttcacaaaatatataaaataaagatcactttaatgaaataaaaaggtatt 39853268  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  39853267 tgtcaatatttata 39853254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 40850429 - 40850316
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  |  |||||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  40850429 agggaacttctatggtacactcacaattttgagtgtaccggtattcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatt 40850330  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  40850329 tgtcaatatttata 40850316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 2684375 - 2684263
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||||||||| |||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  2684375 gggaacttctatggtacactcataattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaatgtattt 2684276  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  2684275 gtcaatatttata 2684263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 9259816 - 9259928
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||| ||||||  | ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  9259816 gggaacttctatggtacactcacaattttgaatgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtattt 9259915  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  9259916 gtcaatatttata 9259928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 14131351 - 14131455
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| | |||||||||| || |||||||||||||||||||||||||    
T  14131351 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatttataaattaacgatcactttaatgaaataaaaaggtatt 14131450  T
Q  224 tgtca 228  Q
    |||||    
T  14131451 tgtca 14131455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 14191302 - 14191198
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||||||| ||||||||| |||||||||||||||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  14191302 agggaacttctatagtacactcataattttgagtgtacccgtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 14191203  T
Q  224 tgtca 228  Q
    |||||    
T  14191202 tgtca 14191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 43224645 - 43224757
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||| ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  43224645 gggaacttctatggtacactcacaattttgagtgtaccggtactcttttttcaaaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 43224744  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  43224745 gtcaatatttata 43224757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 17376756 - 17376650
Alignment:
Q  131 ttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcatt 230  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||| |    
T  17376756 ttctatggtacacttacaattttgagtgtaccagtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaat 17376657  T
Q  231 gtttata 237  Q
     ||||||    
T  17376656 atttata 17376650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 41321414 - 41321300
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||||||||||||||||||||||||||||||    | ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  41321414 tagggaacttctatggtacactcacaattttgagtgtattggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtat 41321315  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  41321314 ttgtcaatatttata 41321300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 44647240 - 44647346
Alignment:
Q  120 aaatagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaagg 219  Q
    |||||| |||||||||||||| |||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  44647240 aaatagagaacttctatggtagactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcattttaatgaaataaaaagg 44647339  T
Q  220 tatttgt 226  Q
    |||||||    
T  44647340 tatttgt 44647346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 27038947 - 27038838
Alignment:
Q  128 aacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtc 227  Q
    |||||||||||||||||||||||||||||||||||  | ||||| ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  27038947 aacttctatggtacactcacaattttgagtgtaccggtactcttctttcacaaaatatataaattaaagatcactttaatgaaataaaaaagtatttgtc 27038848  T
Q  228 attgtttata 237  Q
    | | ||||||    
T  27038847 actatttata 27038838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 37765253 - 37765365
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||| |||||||||||||||||||||||||||||  | ||||||||| ||||| ||||||||||||||| || |||||||||||||||||||||||    
T  37765253 gggaacttttatggtacactcacaattttgagtgtaccggtactcttgttttacaaaatatataaattaaagatcattttaatgaaataaaaaggtattt 37765352  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  37765353 gtcaatatttata 37765365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 29171573 - 29171471
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    ||||||||||||| |||||||||||||||||||||||||  | ||||||||||||||| | |||||||||| || |||||||||||||||||||||||||    
T  29171573 agggaacttctatcgtacactcacaattttgagtgtaccggtactcttgtttcacaaaatttataaattaacgatcactttaatgaaataaaaaggtatt 29171474  T
Q  224 tgt 226  Q
    |||    
T  29171473 tgt 29171471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 5057607 - 5057494
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||| ||||||||||||||||||  | |||||||| |||||||| |||||||||| || ||||||||||||||||||| |||||    
T  5057607 agggaacttctatggtacacccacaattttgagtgtaccggtactcttgttgcacaaattttataaattaacgatcactttaatgaaataaaaatgtatt 5057508  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  5057507 tgtcaatatttata 5057494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 48868061 - 48868174
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||| ||||| ||||||||||||  | |||||||||||||||||||||||||    
T  48868061 agggaacttctatgatacactcacaattttgagtgtaccggtactcttgttttacaaaatatataaattaacaatcactttaatgaaataaaaaggtatt 48868160  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  48868161 tgtcaatatttata 48868174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 52273717 - 52273818
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    ||||||||||||||||||||||||||||||||||||||||  | || |||||||||||| ||||||||||||| | ||||||||||||| ||||||||||    
T  52273717 tagggaacttctatggtacactcacaattttgagtgtaccgttacttttgtttcacaaaatatataaattaaatatcactttaatgaaacaaaaaggtat 52273816  T
Q  223 tt 224  Q
    ||    
T  52273817 tt 52273818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 7426660 - 7426772
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||| |||||||||| |||||||||||||||  | ||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  7426660 gggaacttctacggtacactcataattttgagtgtaccggtactcttctttcacaaaatatataaattaaatatcactttaatgaaataaaaaggtattt 7426759  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  7426760 gtcaatatttata 7426772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 125 - 229
Target Start/End: Complemental strand, 8086052 - 8085948
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||||||||| |||||||| | ||||  | || |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  8086052 gggaacttctatggtacactcataattttgaatttaccggtacttttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 8085953  T
Q  225 gtcat 229  Q
    |||||    
T  8085952 gtcat 8085948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 48481256 - 48481144
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||| ||||||||||||||||||  | |||||||| |||||| | |||||||||| || ||||||||||||||||||||||||||    
T  48481256 gggaacttctatggtacacccacaattttgagtgtaccggtactcttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaggtattt 48481157  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  48481156 gtcaatatttata 48481144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 9222856 - 9222966
Alignment:
Q  127 gaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgt 226  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||||| ||| | |||||||||| ||  |||||||||||||||||||||||||||    
T  9222856 gaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatttataaattaacgattactttaatgaaataaaaaggtatttgt 9222955  T
Q  227 cattgtttata 237  Q
    || | ||||||    
T  9222956 caatatttata 9222966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 27802213 - 27802107
Alignment:
Q  131 ttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcatt 230  Q
    |||||| |||||||||||||||||| ||||||  | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||| |    
T  27802213 ttctatagtacactcacaattttgaatgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaat 27802114  T
Q  231 gtttata 237  Q
     ||||||    
T  27802113 atttata 27802107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 1658548 - 1658661
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||| ||||||||||||||||||  |  ||||||| |||||| | |||||||||| || |||||||||||||||||||||||||    
T  1658548 agggaacttctatggtacacccacaattttgagtgtaccggtattcttgttgcacaaaatttataaattaacgaacactttaatgaaataaaaaggtatt 1658647  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  1658648 tgtcaatatttata 1658661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 10635242 - 10635346
Alignment:
Q  122 atagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggta 221  Q
    |||||||| |||||||||||||||||||||||||||||  |  | ||||||||||||||| |||||||||||| || |||||||||||||||||||| ||    
T  10635242 atagggaatttctatggtacactcacaattttgagtgtgtcggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaagata 10635341  T
Q  222 tttgt 226  Q
    |||||    
T  10635342 tttgt 10635346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 52260964 - 52260840
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||| |||| |        |||||||| |||||||||||||||||||||||||    
T  52260964 tcgtcgacgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttatcttcaaaagataacacatttaactattaatttat 52260865  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | |||||||||||||||||| ||||    
T  52260864 tgatttggtgtaccaatacattcaa 52260840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 50502344 - 50502445
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    |||||||||||||||||| |||||||||||||||||||  | ||||||||||||||| | |||||||||| || ||||||||| |||||||||||| |||    
T  50502344 gggaacttctatggtacattcacaattttgagtgtaccggtactcttgtttcacaaaatttataaattaacgatcactttaataaaataaaaaggtgttt 50502443  T
Q  225 gt 226  Q
    ||    
T  50502444 gt 50502445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 51978112 - 51978225
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaata-nnnnnnncttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||        |||| |||||||||||||||||| ||||||||||    
T  51978112 tcgtcgacgtttttgataaatgatatttaattattataattataggtgatataaaatattttttctcttc-aaaaataacacatttaacaattaatttat 51978210  T
Q  429 tcatttggtgtacca 443  Q
    | |||||||||||||    
T  51978211 tgatttggtgtacca 51978225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 333 - 449
Target Start/End: Complemental strand, 35910310 - 35910193
Alignment:
Q  333 tcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattca 431  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||||| |||| |        ||||||||||||||||||||||||||||||||||| |    
T  35910310 tcgacgtttttggtaaataagatttaattattataattataggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttattga 35910211  T
Q  432 tttggtgtaccaatacac 449  Q
     |||||||||||||||||    
T  35910210 cttggtgtaccaatacac 35910193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 11778891 - 11779015
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| ||| |||||| | ||||||||||||||||||||||||||| ||||||        ||||||||||||| |||||||||||||||||||     
T  11778891 tcgtcgacgtttttagtaaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataaaacatttaactattaatttaa 11778990  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||||| |||||||||||||||||    
T  11778991 tgatttgttgtaccaatacactcaa 11779015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 341 - 484
Target Start/End: Complemental strand, 2247207 - 2247063
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||| ||||| | ||||||||||||||||||||||||||| ||||||        |||||||||||| |||||||||||||||||||| | |||||||||    
T  2247207 tttgataaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaatagcacatttaactattaatttaatgatttggtgt 2247108  T
Q  440 accaatacactcaannnnnnnggtgtaccatggaatttgccataa 484  Q
    ||||||||||||||       |||||||||| ||||||| |||||    
T  2247107 accaatacactcaaatctttaggtgtaccatagaatttgtcataa 2247063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 330 - 452
Target Start/End: Original strand, 50239489 - 50239612
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||| ||||| | ||||||||||||||||||||||||||| ||||||        |||||||||||||||||||||||||||||||||     
T  50239489 tcgtcgatgtttttgataaataagatttaattattataattataggtgatagaaaataatttttctcttcaaaaaataacacatttaactattaatttaa 50239588  T
Q  429 tcatttggtgtaccaatacactca 452  Q
    | |||| |||||||||||||||||    
T  50239589 tgatttagtgtaccaatacactca 50239612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 330 - 491
Target Start/End: Original strand, 632903 - 633065
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||| ||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  632903 tcgtagacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 633002  T
Q  429 tcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccataagatttat 491  Q
    | ||| |||||||||||||||||||        ||||||||| ||||||||||||| ||||||    
T  633003 tgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgccataaaatttat 633065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 31015889 - 31015984
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||||||||||||||||||||||||||| |||||||| || ||||||||||| ||| | || ||||||| || ||||||||||||||||||||||||    
T  31015889 ggaacttctatggtacactcacaattttaagtgtaccgatactcttgtttcataaaattta-aaattaacgatcactttaatgaaataaaaaggtat 31015984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 27352998 - 27352874
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||||||| | |||||||||||| |||||||||||||||||||| |       ||||||||| ||||||||||||||||||||| |     
T  27352998 tcgtcgacgtttttggtaaataagatttaattattacaattataggtgatataaaataatttttctcttcaaaaactaacacatttaactattaattcaa 27352899  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | |||| ||||| ||||||||||||    
T  27352898 taattttgtgtatcaatacactcaa 27352874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 396 - 453
Target Start/End: Complemental strand, 9166957 - 9166900
Alignment:
Q  396 ttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9166957 ttcaaaaaataacacatttaactattaatttattgatttggtgtaccaatacactcaa 9166900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 354 - 446
Target Start/End: Complemental strand, 2620773 - 2620680
Alignment:
Q  354 atttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaata 446  Q
    |||||||||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  2620773 atttaattattataattataggtgatataaaacaatttttctcttcaaaaaataacacatttaactattaatttattgatttagtgtaccaata 2620680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 330 - 483
Target Start/End: Original strand, 48616703 - 48616856
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||| |||||||||||||||||||||||||    
T  48616703 tcgtcgacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaa-ataacacatttaactattaatttat 48616801  T
Q  429 tcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
    | ||| |||||||||||||||||||        ||||||||| ||||||||||||    
T  48616802 tgattgggtgtaccaatacactcaaatttttgagtgtaccatagaatttgccata 48616856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 483
Target Start/End: Complemental strand, 7122107 - 7121954
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttatt 429  Q
    |||||||||| |||| ||||| | ||||||||||||||||||||||||||| |||  |       | |||||||| || ||||||||||||||||||| |    
T  7122107 tcgtcgacgtttttgctaaataagatttaattattataattataggtgatagaaataatttttctcgtcaaaaaacaaaacatttaactattaatttaat 7122008  T
Q  430 catttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccata 483  Q
     ||||| |||||||||||||||||       ||| |||||| ||||||||||||    
T  7122007 gatttgttgtaccaatacactcaaatctttaggtataccatagaatttgccata 7121954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 26011197 - 26011321
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  26011197 tcgtcgacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 26011296  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| |||||| ||||||||||||    
T  26011297 tgattgggtgtatcaatacactcaa 26011321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Original strand, 36274972 - 36275096
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttat 428  Q
    |||| ||||| |||||||||| | ||||||||||||||||||||||||||| ||||| |        |||||||||||||||||||||||| ||||||||    
T  36274972 tcgttgacgtttttggtaaataagatttaattattataattataggtgatagaaaataatttttcttttcaaaaaataacacatttaactactaatttat 36275071  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||||||| ||  |||||||||||    
T  36275072 tgatttggtatattaatacactcaa 36275096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 51519920 - 51519809
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       || ||||||||||| ||||||||||||||||||   ||||||||||    
T  51519920 tttggtaaataagatttagttattataattataggtgatagaaaataattttc-ctacaaaaaataactcatttaactattaatttaagaatttggtgta 51519822  T
Q  441 ccaatacactcaa 453  Q
    |||||||||||||    
T  51519821 ccaatacactcaa 51519809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 37498889 - 37498771
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||        | |||||||||||  |||||||||||||||||   ||||    
T  37498889 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatattttttcttacaaaaaataacttatttaactattaatttaagaattt 37498790  T
Q  435 ggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||    
T  37498789 ggtgtaccaatacactcaa 37498771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 396 - 453
Target Start/End: Original strand, 42317147 - 42317204
Alignment:
Q  396 ttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  42317147 ttcaaaaaataacacatttaactattaatttattgatttgatgtaccaatacactcaa 42317204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 484
Target Start/End: Original strand, 5956787 - 5956937
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaata-nnnnnnncttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||||||||||||||||||||||||| ||||||        || ||||||||||| ||||||||||||||||||   |||    
T  5956787 gacgtttttggtaaataagatttaattattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaaaatt 5956886  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgccataa 484  Q
     |||||||||||||||| ||       ||||||||||  ||||||||||||    
T  5956887 cggtgtaccaatacacttaaattgttgggtgtaccatataatttgccataa 5956937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 449
Target Start/End: Original strand, 28791634 - 28791743
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||||||||||||||| ||||||||| |||| |        |||||||||||||||||||||||||||||||| || | |||||||    
T  28791634 tttggtaaataagatttaattattataattgtaggtgatagaaaacaatttttctcttcaaaaaataacacatttaactattaatttgttgacttggtgt 28791733  T
Q  440 accaatacac 449  Q
    ||||||||||    
T  28791734 accaatacac 28791743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 39190823 - 39190936
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||    
T  39190823 tttggtaaataagatttagttattataattataggtgatagaaaataatattttcctacaaaaaataactcatttaactattaatttaagaatttggtgt 39190922  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  39190923 accaatacactcaa 39190936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 332 - 451
Target Start/End: Complemental strand, 23304556 - 23304436
Alignment:
Q  332 gtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattc 430  Q
    ||||| || |||| ||||| | ||||||||||||||||||||||||||| |||| |        ||| ||||||||||||||||||||||||||||| |     
T  23304556 gtcgatgtttttgataaataagatttaattattataattataggtgatagaaaacaatttttctcttaaaaaaataacacatttaactattaatttaatg 23304457  T
Q  431 atttggtgtaccaatacactc 451  Q
    |||| ||||||||||||||||    
T  23304456 attttgtgtaccaatacactc 23304436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 33906470 - 33906346
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  33906470 tcgtcgacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataacacatttaactattaatttgt 33906371  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | |||  ||||||||||| ||||||    
T  33906370 tgattgagtgtaccaatatactcaa 33906346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 45423755 - 45423639
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  45423755 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatt 45423656  T
Q  434 tggtgtaccaatacact 450  Q
    |||||||||||||||||    
T  45423655 tggtgtaccaatacact 45423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 24247844 - 24247914
Alignment:
Q  167 ctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    ||||||||| ||||| |||||||||||| || |||||||||||||||||||||||||||||| | ||||||    
T  24247844 ctcttgttttacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttata 24247914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 38262394 - 38262513
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| |||||||| |||||||||   |||    
T  38262394 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaacaattaatttaagaatt 38262493  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  38262494 tggtgtaccaatacactcaa 38262513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 39971529 - 39971648
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  39971529 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaagaatt 39971628  T
Q  434 tggtgtaccaatacactcaa 453  Q
    |||| |||||||||||||||    
T  39971629 tggtataccaatacactcaa 39971648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 341 - 480
Target Start/End: Complemental strand, 16482715 - 16482576
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    |||||| ||| | ||||| |||||||||| |||||||||| ||||||       || ||||||||||| ||||||||||||||||||   ||||||||||    
T  16482715 tttggtgaataagatttagttattataatcataggtgatagaaaataatttttcctacaaaaaataactcatttaactattaatttaaggatttggtgta 16482616  T
Q  441 ccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    |||||||||| ||       |||||||||| |||||||||    
T  16482615 ccaatacacttaaattattgggtgtaccatagaatttgcc 16482576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 33098982 - 33099034
Alignment:
Q  401 aaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  33098982 aaaataacacatttaactattaatttattgattttgtgtaccaatacactcaa 33099034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 8461793 - 8461905
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcatttggtgta 440  Q
    |||||||||| | || || ||||||||||||||||||||| |||  |       || ||||||||||| ||||||||||||||||||   ||||||||||    
T  8461793 tttggtaaataagatgtagttattataattataggtgatagaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtgta 8461892  T
Q  441 ccaatacactcaa 453  Q
    |||||||||||||    
T  8461893 ccaatacactcaa 8461905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 480
Target Start/End: Complemental strand, 41073415 - 41073270
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttcaaaaaataacacatttaactattaatttattcattt 434  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| |||  |       || ||||||||||  ||||||||||||||||||   ||||    
T  41073415 gacgtttttggtaaataagatttagttattataattataggtgatagaaataattttttcctacaaaaaataattcatttaactattaatttaaggattt 41073316  T
Q  435 ggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
     ||||||||||||||||||       |||||||||| |||||||||    
T  41073315 tgtgtaccaatacactcaaatggttgggtgtaccatagaatttgcc 41073270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 41550148 - 41550259
Alignment:
Q  126 ggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttg 225  Q
    ||||||||||||||||||||| || ||| ||||||||  | |||||||||||||||   |||||||||| ||  | ||| ||||||||||||| ||||||    
T  41550148 ggaacttctatggtacactcagaaattttagtgtaccggtactcttgtttcacaaaacttataaattaacgattatttttatgaaataaaaagttatttg 41550247  T
Q  226 tcattgtttata 237  Q
    ||| | ||||||    
T  41550248 tcaatatttata 41550259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 31930958 - 31931077
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||| ||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||    
T  31930958 gacgtttttggtaaataagatttagttattataattatagatgatagaaaatatatttttcctacaaaaaataactcatttaactattaatttaaggatt 31931057  T
Q  434 tggtgtaccaatacactcaa 453  Q
    || |||||||||||||||||    
T  31931058 tgatgtaccaatacactcaa 31931077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 480
Target Start/End: Original strand, 922166 - 922248
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||||||||||||       |||||||||| |||||||||    
T  922166 caaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 922248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 3150335 - 3150376
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3150335 tcattgtttataaggatcatattacaaaatttacattttgtc 3150376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 7426810 - 7426851
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7426810 tcattgtttataaggatcatattacaaaatttacattttgtc 7426851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 10061414 - 10061373
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10061414 tcattgtttataaggatcatattacaaaatttacattttgtc 10061373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 423
Target Start/End: Original strand, 10179128 - 10179222
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaa-tannnnnnncttcaaaaaataacacatttaactattaa 423  Q
    |||||||||| |||||||||| | ||||||||||||||||||||| ||||| ||||  |       |||||||||||||||||||||||||||||    
T  10179128 tcgtcgacgtttttggtaaataagatttaattattataattatagatgatagaaaacaatttttctcttcaaaaaataacacatttaactattaa 10179222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 14191147 - 14191106
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14191147 tcattgtttataaggatcatattacaaaatttacattttgtc 14191106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 480
Target Start/End: Complemental strand, 27295140 - 27295058
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||||||||||||       |||||||||| |||||||||    
T  27295140 caaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 27295058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 33234053 - 33234166
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||| |||||| ||| || ||| ||||||||| | || ||||||||||||   |||||||||| || || ||| ||||||||||||| ||||    
T  33234053 agggaacttctacggtacattcagaaattttagtgtaccagtacttttgtttcacaaaacttataaattaacgatcatttttatgaaataaaaagttatt 33234152  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  33234153 tgtcaatatttata 33234166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 33829014 - 33829055
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33829014 tcattgtttataaggatcatattacaaaatttacattttgtc 33829055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 33838952 - 33838911
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33838952 tcattgtttataaggatcatattacaaaatttacattttgtc 33838911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 39853214 - 39853173
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39853214 tcattgtttataaggatcatattacaaaatttacattttgtc 39853173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 43224795 - 43224836
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43224795 tcattgtttataaggatcatattacaaaatttacattttgtc 43224836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 44647395 - 44647436
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44647395 tcattgtttataaggatcatattacaaaatttacattttgtc 44647436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 49289379 - 49289420
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  49289379 tcattgtttataaggatcatattacaaaatttacattttgtc 49289420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 51184193 - 51184069
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnc--ttcaaaaaataacacatttaactattaattta 427  Q
    |||||||||| |||| ||||| | |||||||||||||| |||||||||||| ||||||          || ||||||||| |||||||||||||||||||    
T  51184193 tcgtcgacgtttttgctaaataagatttaattattata-ttataggtgatagaaaataatttttctctttaaaaaaataaaacatttaactattaattta 51184095  T
Q  428 ttcatttggtgtaccaatacactcaa 453  Q
     | ||||| |||||||||||||||||    
T  51184094 atgatttgttgtaccaatacactcaa 51184069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 51781369 - 51781483
Alignment:
Q  340 ctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtg 438  Q
    ||||||| ||| | ||||| |||||||||| |||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   ||||||||    
T  51781369 ctttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttggtg 51781468  T
Q  439 taccaatacactcaa 453  Q
    |||||||||||||||    
T  51781469 taccaatacactcaa 51781483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 52079700 - 52079659
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  52079700 tcattgtttataaggatcatattacaaaatttacattttgtc 52079659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 335 - 443
Target Start/End: Original strand, 29106624 - 29106733
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaat-annnnnnncttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||| |       || ||||||||||| ||||||||||||||||||   |||    
T  29106624 gacgtttttggtaaataagatttagttattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaagatt 29106723  T
Q  434 tggtgtacca 443  Q
    ||||||||||    
T  29106724 tggtgtacca 29106733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 335 - 480
Target Start/End: Complemental strand, 35305297 - 35305151
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||| ||||||||||||||  ||||||       | | |||||||||||  |||||||||||||||||   |||    
T  35305297 gacgtttttggtaaataagatttagttattctaattataggtgatgaaaaatatttttttcctacaaaaaataacttatttaactattaatttaagaatt 35305198  T
Q  434 tggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    ||||||||||||||||||||       |||||||||| |||||||||    
T  35305197 tggtgtaccaatacactcaaattgttgggtgtaccatagaatttgcc 35305151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 330 - 450
Target Start/End: Original strand, 47719228 - 47719348
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    ||||||| || |||||||| | | |||||||||||| |||||||||||||| ||||||        ||||||||||||||||||| | |||||||||||     
T  47719228 tcgtcgatgtttttggtaagtaagatttaattattacaattataggtgatagaaaataaattttctcttcaaaaaataacacatt-acctattaatttaa 47719326  T
Q  429 tcatttggtgtaccaatacact 450  Q
    | ||||| ||||||||||||||    
T  47719327 tgatttgatgtaccaatacact 47719348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 50905721 - 50905608
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | |||||  |||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   ||| |||||    
T  50905721 tttggtaaataagatttagatattataattataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggattcggtgt 50905622  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  50905621 accaatacactcaa 50905608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 52079839 - 52079776
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatata 188  Q
    ||||||||||||| |||||||| |||||||||||||||  | ||||||||||||||| ||||||    
T  52079839 gggaacttctatgatacactcataattttgagtgtaccggtactcttgtttcacaaaatatata 52079776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 27038800 - 27038762
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27038800 tcattgtttataaggatcatattacaaaatttacatttt 27038762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 31571121 - 31571159
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31571121 tcattgtttataaggatcatattacaaaatttacatttt 31571159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 52273869 - 52273907
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||||||||||||||||||    
T  52273869 tcattgtttataaggatcatattacaaaatttacatttt 52273907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 52303159 - 52303040
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnncttc-aaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| |||||||||| |||||||||| ||||||       | |  |||||||||| ||||||||||||||||||   |||    
T  52303159 gacgtttttggtaaataagatttagttattataataataggtgatagaaaatatttttttcctataaaaaataactcatttaactattaatttaagaatt 52303060  T
Q  434 tggtgtaccaatacactcaa 453  Q
    || |||||||||||||||||    
T  52303059 tgatgtaccaatacactcaa 52303040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 8569023 - 8569089
Alignment:
Q  167 ctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    ||||||||||||||| |||||||||||| ||    ||||||||||||||||||||||||||| | ||||||    
T  8569023 ctcttgtttcacaaaatatataaattaacga----tttaatgaaataaaaaggtatttgtcaatatttata 8569089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 8569126 - 8569167
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  8569126 tcattgtttataaggatcatattaaaaaatttacattttgtc 8569167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 9259966 - 9260007
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  9259966 tcattgtttataaggatcatattaaaaaatttacattttgtc 9260007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 24247952 - 24247993
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  24247952 tcattgtttataaggatcatattaaaaaatttacattttgtc 24247993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 27802067 - 27802026
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  27802067 tcattgtttataaggatcatattaaaaaatttacattttgtc 27802026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 29207666 - 29207585
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccacttta 205  Q
    |||||||||||||| ||||  ||||||||||||| |||| || |||||||| |||||| | |||||||||| || |||||||    
T  29207666 agggaacttctatgatacatccacaattttgagtataccgatactcttgttgcacaaaatttataaattaatgatcacttta 29207585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 41321262 - 41321221
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  41321262 tcattgtttataaggatcatattaaaaaatttacattttgtc 41321221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 20280628 - 20280516
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||| |||||||| | || ||| ||||||||  | |||||||||||||||   ||||||||||  | || ||| ||||||||||||| |||||    
T  20280628 gggaacttctacggtacactaagaaattttagtgtaccggtactcttgtttcacaaaacttataaattaacaatcatttttatgaaataaaaagttattt 20280529  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  20280528 gtcaatatttata 20280516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 480
Target Start/End: Complemental strand, 28493936 - 28493810
Alignment:
Q  355 tttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    |||| ||||||||||||||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   |||||||||| ||||||||| ||    
T  28493936 tttagttattataattataggtgatagaaaatatttttttcctacaaaaaataactcatttaactattaatttaaggatttggtgtaacaatacacttaa 28493837  T
Q  454 nnnnnnnggtgtaccatggaatttgcc 480  Q
           |||||||||| |||||||||    
T  28493836 attattgggtgtaccatagaatttgcc 28493810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 453
Target Start/End: Original strand, 46770998 - 46771111
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||||||| | ||||| |||||||||||| |||||||| ||||||       |   ||||||||||| ||||||||||||||||||   ||||||| |    
T  46770998 tttggtaaataagatttagttattataattacaggtgatagaaaataattttttcccacaaaaaataactcatttaactattaatttaaggatttggtat 46771097  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  46771098 accaatacactcaa 46771111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 51985074 - 51984961
Alignment:
Q  341 tttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatttggtgt 439  Q
    |||||| ||| | ||||| |||||||||| |||||||||| ||||||       | | ||||||||||| ||||||||||||||||||   ||||| |||    
T  51985074 tttggtgaataagatttagttattataatcataggtgatagaaaataattttttcctacaaaaaataactcatttaactattaatttaaggatttgatgt 51984975  T
Q  440 accaatacactcaa 453  Q
    ||||||||||||||    
T  51984974 accaatacactcaa 51984961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 18641970 - 18641915
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacactcaa 453  Q
    ||||||||||| ||||||||||||||||||   |||| ||||||||||||||||||    
T  18641970 caaaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaa 18641915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 395 - 450
Target Start/End: Original strand, 26102794 - 26102849
Alignment:
Q  395 cttcaaaaaataacacatttaactattaatttattcatttggtgtaccaatacact 450  Q
    |||||||||||||| ||||||||||||||||||   |||||||||| |||||||||    
T  26102794 cttcaaaaaataactcatttaactattaatttaaggatttggtgtatcaatacact 26102849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 17376612 - 17376574
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17376612 tcattgtttataaggatcatattaaaaaatttacatttt 17376574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 37765403 - 37765441
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  37765403 tcattgtttataaggatcatattataaaatttacatttt 37765441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 44246322 - 44246372
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaataca 448  Q
    ||||||||||| ||||||||||||||||||   ||||||||||||||||||    
T  44246322 caaaaaataactcatttaactattaatttaaggatttggtgtaccaataca 44246372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 9223004 - 9223045
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  9223004 tcattctttataaggatcatattaaaaaatttacattttgtc 9223045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 14131504 - 14131545
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  14131504 tcattgtttataaggatcatattaaaaaatttatattttgtc 14131545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 20280478 - 20280437
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  20280478 tcattgtttataaggatgatattaaaaaatttacattttgtc 20280437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 33771645 - 33771758
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||| | |||||||| |  ||| |||||||   | |||||||||||||||   |||||||||| || || ||| ||||||||||||| ||||    
T  33771645 agggaacttctacgatacactcagagattttagtgtactggtactcttgtttcacaaaacttataaattaacgatcatttttatgaaataaaaagttatt 33771744  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  33771745 tgtcaatatttata 33771758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 48868212 - 48868253
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  48868212 tcattctttataaggatcatattaaaaaatttacattttgtc 48868253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 398 - 450
Target Start/End: Complemental strand, 23056847 - 23056795
Alignment:
Q  398 caaaaaataacacatttaactattaatttattcatttggtgtaccaatacact 450  Q
    ||||||||||| ||||||||||||||||||   ||| ||||||||||||||||    
T  23056847 caaaaaataactcatttaactattaatttaaaaattcggtgtaccaatacact 23056795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 387
Target Start/End: Original strand, 23459816 - 23459868
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaata 387  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  23459816 gacgtttttggtaaataagatttagttattataattataggtgatagaaaata 23459868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 28094908 - 28094948
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgt 266  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  28094908 tcattgtttataaggatcatattaaaaaatttatattttgt 28094948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 29171422 - 29171382
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgt 266  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  29171422 tcattgtttataaggatcaaattaaaaaatttacattttgt 29171382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 33771796 - 33771832
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatt 262  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33771796 tcattgtttataaggatcatattaaaaaatttacatt 33771832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 45673461 - 45673409
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaata 387  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  45673461 gacgtttttggtaaataagatttagttattataattataggtgatagaaaata 45673409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 50502494 - 50502534
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgt 266  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  50502494 tcattgtttataaggatcaaattaaaaaatttacattttgt 50502534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 33234204 - 33234242
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatttt 264  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  33234204 tcattgtttataaggatcatattaaaaagtttacatttt 33234242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 401 - 480
Target Start/End: Complemental strand, 34256532 - 34256453
Alignment:
Q  401 aaaataacacatttaactattaatttattcatttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcc 480  Q
    |||||||| | ||||| |||||||||| | |||||||||||| ||||||||||       |||||||||| |||||||||    
T  34256532 aaaataactcgtttaattattaatttaataatttggtgtaccgatacactcaaattgttgggtgtaccatagaatttgcc 34256453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 5057456 - 5057415
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  5057456 tcattgtttataaggattatattaaaaaaattacattttgtc 5057415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #122
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 48481106 - 48481065
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||    
T  48481106 tcattgtttataaggattatattaaaaaaattacattttgtc 48481065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #123
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 49739387 - 49739346
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||| |||||| ||| |||||||||||||    
T  49739387 tcattgtttataaggattatattaaaaattttacattttgtc 49739346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0493 (Bit Score: 85; Significance: 4e-40; HSPs: 2)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 1794 - 1682
Alignment:
Q  125 gggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtattt 224  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  1794 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtattt 1695  T
Q  225 gtcattgtttata 237  Q
    |||| | ||||||    
T  1694 gtcaatatttata 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0493; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 1643 - 1602
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1643 tcattgtttataaggatcatattacaaaatttacattttgtc 1602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 82; Significance: 3e-38; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 292027 - 291918
Alignment:
Q  128 aacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtc 227  Q
    ||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  292027 aacttctatggtacactcacaattttgagtgtatcagtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtc 291928  T
Q  228 attgtttata 237  Q
    | | ||||||    
T  291927 aatatttata 291918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 36869 - 36988
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||  ||||||        || ||||||||||| ||||||||||||||||||   |||    
T  36869 gacgtttttggtaaataagatttagttattataattataggtgatgaaaaatattttttttctacaaaaaataactcatttaactattaatttaaggatt 36968  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||| ||||||||||||    
T  36969 tggtgtatcaatacactcaa 36988  T

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Target: scaffold0005; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 291880 - 291839
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  291880 tcattgtttataaggatcatattacaaaatttacattttgtc 291839  T

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Target: scaffold0625 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 332 - 481
Target Start/End: Original strand, 6520 - 6670
Alignment:
Q  332 gtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttattc 430  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||||     
T  6520 gtcgatgtttttggtaaatgatatttaattattataattataggtgatataaaatattttttctcttcaaaaaataacatatttaactattaatttattg 6619  T
Q  431 atttggtgtaccaatacactcaannnnnnnggtgtaccatggaatttgcca 481  Q
    |||||||||||||||||||||||       |||||||||| ||||||||||    
T  6620 atttggtgtaccaatacactcaaattttttggtgtaccatagaatttgcca 6670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 166417 - 166531
Alignment:
Q  123 tagggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtat 222  Q
    |||||||||| ||||||||| |||||||||||||||||||  | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  166417 tagggaacttatatggtacattcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtat 166516  T
Q  223 ttgtcattgtttata 237  Q
    |||||| | ||||||    
T  166517 ttgtcaatatttata 166531  T

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Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 166569 - 166605
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacatt 262  Q
    |||||||||||||||||||||||||||||||||||||    
T  166569 tcattgtttataaggatcatattacaaaatttacatt 166605  T

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Target: scaffold0239 (Bit Score: 74; Significance: 2e-33; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 15789 - 15676
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||| |||| |||||||||| |||||||||||||||||||| ||||    
T  15789 agggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatatagaaattaaagatcactttaatgaaataaaaagatatt 15690  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  15689 tgtcaatatttata 15676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 15638 - 15597
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  15638 tcattgtttataagaatcatattacaaaatttatattttgtc 15597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 2171 - 2047
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||||||||||||||||||||  |||| |        ||||||||||||| |||||||||||||||||| |    
T  2171 tcgtcgacgtttttggttaataagatttaattattataattataggtgatggaaaacaatttttctcttcaaaaaataagacatttaactattaatttgt 2072  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| |||||||||||||||||||    
T  2071 tgattgggtgtaccaatacactcaa 2047  T

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Target: scaffold0113 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 453
Target Start/End: Complemental strand, 29396 - 29272
Alignment:
Q  330 tcgtcgacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnn-cttcaaaaaataacacatttaactattaatttat 428  Q
    |||||||||| |||||| ||| | ||||||||| ||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||| |    
T  29396 tcgtcgacgtttttggttaataagatttaattagtataattataggtgatggaaaacaatttctctcttcaaaaaataacacatttaactattaatttgt 29297  T
Q  429 tcatttggtgtaccaatacactcaa 453  Q
    | ||| |||||||||||||||||||    
T  29296 tgattgggtgtaccaatacactcaa 29272  T

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Target: scaffold0121 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 14011 - 13898
Alignment:
Q  124 agggaacttctatggtacactcacaattttgagtgtaccaatgctcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatt 223  Q
    |||||||||||||||||||| || |||||||||||||||  | || ||||| |||||| | ||| |||||| ||  |||||||| |||||||||||||||    
T  14011 agggaacttctatggtacacccataattttgagtgtaccggtacttttgttgcacaaaatttatgaattaacgattactttaatcaaataaaaaggtatt 13912  T
Q  224 tgtcattgtttata 237  Q
    ||||| | ||||||    
T  13911 tgtcaatatttata 13898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 17540 - 17599
Alignment:
Q  168 tcttgtttcacaaattatataaattaaagaccactttaatgaaataaaaaggtatttgtc 227  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||    
T  17540 tcttgtttcacaaaatatataaattaaagattactttaatgaaataaaaaggtatttgtc 17599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 17647 - 17688
Alignment:
Q  226 tcattgtttataaggatcatattacaaaatttacattttgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17647 tcattgtttataaggatcatattacaaaatttacattttgtc 17688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 48156 - 48037
Alignment:
Q  335 gacgtctttggtaaatgatatttaattattataattataggtgatataaaatannnnnnnctt-caaaaaataacacatttaactattaatttattcatt 433  Q
    ||||| |||||||||| | ||||| ||||||||||||||||||||| ||||||       | | ||||||||||  ||||||||||||||||||   |||    
T  48156 gacgtttttggtaaataagatttagttattataattataggtgatagaaaatatttttttcctacaaaaaataaatcatttaactattaatttaaggatt 48057  T
Q  434 tggtgtaccaatacactcaa 453  Q
    ||||||||||||||||||||    
T  48056 tggtgtaccaatacactcaa 48037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 8500 - 8538
Alignment:
Q  199 cactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  8500 cactttaatgaaataaaaaggtatttgtcaatatttata 8538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 15095 - 15133
Alignment:
Q  199 cactttaatgaaataaaaaggtatttgtcattgtttata 237  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  15095 cactttaatgaaataaaaaggtatttgtcaatatttata 15133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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