View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16743_low_14 (Length: 300)
Name: NF16743_low_14
Description: NF16743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16743_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 19 - 295
Target Start/End: Original strand, 37941148 - 37941424
Alignment:
| Q |
19 |
acaaggcaaagaagaaatgtttaattgatttgatggtcatatagttaagttgaggaaataccaaaattcactctttcatacattagaattatactaccaa |
118 |
Q |
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| T |
37941148 |
acaaggcaaagaagaaatgtttaattgatttgatggtcatatagttaagttgaggaaataccaaaattcactctttcatacattagaattatactaccag |
37941247 |
T |
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| Q |
119 |
taccatttttcatgaacaaaaacataatgagtgaacttaattatactagcatcagttgctttacaaaatacacttatgaaattaaacaattaattaatcc |
218 |
Q |
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| T |
37941248 |
taccatttttcatgaacaaaaacataatgagtgaacttaattatactagcatcagttgctttacaaattacacttatgaaattaaacaattaattaatcc |
37941347 |
T |
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| Q |
219 |
atatgatcacatgaatcattgttgttaatggtgtcatgatgagttcttcgggcccattcttttgaacctttgctact |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
37941348 |
atatgatcacatgaatcattgttgttaatggtgtcatgatgagttcttcgggcccattcttttgaaccattgttact |
37941424 |
T |
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