View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16746_low_2 (Length: 492)
Name: NF16746_low_2
Description: NF16746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16746_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 455; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 6 - 476
Target Start/End: Original strand, 18937298 - 18937768
Alignment:
| Q |
6 |
gatgtcgaagaatattttaaattgtcgtcgtggttaactttaatgttgcagaaaattacagacaaatatagttgtagatacctcaaaagcatttaagttg |
105 |
Q |
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| T |
18937298 |
gatgtccaacaatattttaaattgtcgtcgtggttaactttaatgttgcagaaaattacagacaaatatagttgtagatacctcaaaagcatttaagttg |
18937397 |
T |
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| Q |
106 |
cgaatgaaaatgcagttgcggactacaatttaaaaccaagaagtacaaaaaagaagcggagaacatgaaagatgggttgatgtcagtcagcagggcatat |
205 |
Q |
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| T |
18937398 |
cgaatgaaaatgcagttgcggactacaatttaaaaccaagaagtacaaaaaagaagcggagaacatgaaagatgggttgatgtcagtcagcagggcatat |
18937497 |
T |
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| Q |
206 |
gagtaggatgcaaagcaagtcaagcagtaaaattgatgcatcagacaaagctaacaagaaggggtagaaaattcaaataataaggaatgttctcccaata |
305 |
Q |
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| T |
18937498 |
gagtaggatgcaaagcaagtcaagcagtaaaattgatgtatcagacaaagctaacaagaaggggtagaaaattcaaataataaggaatgttctcccaata |
18937597 |
T |
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| Q |
306 |
caaatgagtcatagatcagagtatctttctttgatcttcatttcatttgtgttgttgatatttggatttgtgttgaaagggatagggggattgatctccc |
405 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18937598 |
caaatgagtcatagatcagagtatctttctttgatcttcatttcatttgtgttgttgatatttggatttgtgttgaaagggatagggggattgatctccc |
18937697 |
T |
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| Q |
406 |
aactcatatttattgtaagagttgtggatatgtgcttcctggtcctgggagacatcgataatcgtatgttc |
476 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18937698 |
aactcatatttattgttagagttgtggatatgtgcttcctggtcctgggagacatcgataatcgtatgttc |
18937768 |
T |
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