View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16746_low_7 (Length: 250)
Name: NF16746_low_7
Description: NF16746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16746_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 30273698 - 30273933
Alignment:
| Q |
1 |
tcaagttaaatttattttggcaactttgttttttgtcaagtttggttgttagacttgtcctcctagaggatttgggtcatgagattaggtctgatgcaca |
100 |
Q |
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| T |
30273698 |
tcaagttaaatttattttggcaactttgttttttgtcaagtttggttgttagacttgtcctcctagaggatttgggtcatgagattaggtctgatgcaca |
30273797 |
T |
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| Q |
101 |
tatttacattagcatgaagacatcaaataagtcaaataggctttagactaaagtggaaaactaagattgactcnnnnnnnngtggaaagctaaaattata |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
30273798 |
tatttacattagcatgaagacatcaaataagtcaaataggctttagactaaagtggaaaactaagattgactcaaaaaaaagtggaaagctaaaattata |
30273897 |
T |
|
| Q |
201 |
tagatatattttgaagaaattatacagtggtaagtc |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
30273898 |
tagatatattttgaagaaattatacagtggtaagtc |
30273933 |
T |
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