View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16748_high_2 (Length: 589)
Name: NF16748_high_2
Description: NF16748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16748_high_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 568; Significance: 0; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 568; E-Value: 0
Query Start/End: Original strand, 1 - 572
Target Start/End: Original strand, 23596554 - 23597125
Alignment:
| Q |
1 |
attttcgatcttggtggtggaacttttgatgtttcacttcttactattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596554 |
attttcgatcttggtggtggaacttttgatgtttcacttcttactattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggag |
23596653 |
T |
|
| Q |
101 |
gtgaagattttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggtt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596654 |
gtgaagattttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggtt |
23596753 |
T |
|
| Q |
201 |
gagaactgcttgtgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactacc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596754 |
gagaactgcttgtgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactacc |
23596853 |
T |
|
| Q |
301 |
attactcgcgctcgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaaca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596854 |
attactcgcgctcgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaaca |
23596953 |
T |
|
| Q |
401 |
gtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcat |
500 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596954 |
gtgttgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcat |
23597053 |
T |
|
| Q |
501 |
caaccctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgagcggcgaaggcaatgagaa |
572 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597054 |
caaccctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgagcggcgaaggcaatgagaa |
23597125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 1 - 572
Target Start/End: Original strand, 23587702 - 23588273
Alignment:
| Q |
1 |
attttcgatcttggtggtggaacttttgatgtttcacttcttactattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
23587702 |
attttcgatcttggtggtggaacttttgatgtttccctacttactattgaggaaggtatctttgaggtcaaagctacagctggtgatacacatttgggag |
23587801 |
T |
|
| Q |
101 |
gtgaagattttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggtt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
23587802 |
gtgaagattttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaggatattagtggaaatccaagggctcttagaagatt |
23587901 |
T |
|
| Q |
201 |
gagaactgcttgtgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactacc |
300 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
23587902 |
gagaactgcttgcgagagagctaagaggaccctttcctctactgctcaaaccaccattgaaattgattcattgtttgagggtattgacttttacactacc |
23588001 |
T |
|
| Q |
301 |
attactcgcgctcgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaaca |
400 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588002 |
atcactcgggctcgttttgaagagctcaacatggatctgtttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaaca |
23588101 |
T |
|
| Q |
401 |
gtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcat |
500 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
23588102 |
gtgtccatgatgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcat |
23588201 |
T |
|
| Q |
501 |
caaccctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgagcggcgaaggcaatgagaa |
572 |
Q |
| |
|
|||||| ||||| |||||||| ||||| || || |||||||||||||||||||| || || ||||||||||| |
|
|
| T |
23588202 |
caaccccgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtggtgagggcaatgagaa |
23588273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 563
Target Start/End: Complemental strand, 54396607 - 54396060
Alignment:
| Q |
16 |
ggtggaacttttgatgtttcacttcttactattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggaggtgaagattttgata |
115 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||||||||||| ||| | || |||||||||||||||| |
|
|
| T |
54396607 |
ggtggaactttcgatgtttctcttcttactattgaagaagggatcttcgaagtgaaagctactgctggtgatactcatcttggtggtgaagattttgata |
54396508 |
T |
|
| Q |
116 |
acaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaactgcttgtga |
215 |
Q |
| |
|
|||| |||||||| ||||||||| || || | |||||| |||||||| ||||||||||| ||| |||| ||| | || || || ||||| |||||||| |
|
|
| T |
54396507 |
acagaatggtgaatcattttgtttcggagtttaggaggaaaaataagaaggatattagtggtaatgcaagagctttgaggagattaagaacagcttgtga |
54396408 |
T |
|
| Q |
216 |
gagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactaccattactcgcgctcgt |
315 |
Q |
| |
|
|||||||||||| || ||||| || |||||||| || || || |||||||||||||||||||| || ||||| || || | || ||||| | || | |
|
|
| T |
54396407 |
gagagctaagagaacactttcttcaactgctcagacaacaatagaaattgattctttgtttgaaggaattgatttctatgcaactattacaagggcgaga |
54396308 |
T |
|
| Q |
316 |
tttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatgatgttg |
415 |
Q |
| |
|
|||||||| | || |||||| | |||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||| ||| |||| |||| |
|
|
| T |
54396307 |
tttgaagaattgaatatggatttgtttaggaaatgtatggaacctgttgagaagtgtctaagggatgctaagattgataagagtcatgttcatgaagttg |
54396208 |
T |
|
| Q |
416 |
ttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggc |
515 |
Q |
| |
|
|||||||||| ||||| || |||||||| || |||||||| |||||||| ||||||||||||||||| || ||||| ||||| || ||||||||||| || |
|
|
| T |
54396207 |
ttcttgttggtggatcaacaaggattccaaaagttcaacagcttttgcaggatttcttcaatgggaaagagctttgcaagagtattaaccctgatgaagc |
54396108 |
T |
|
| Q |
516 |
tgttgcttatggcgctgcagtccaagctgctattttgagcggcgaagg |
563 |
Q |
| |
|
|||||||||||| ||||| || ||||| || ||||||||||| ||||| |
|
|
| T |
54396107 |
tgttgcttatggtgctgctgttcaagcagcgattttgagcggtgaagg |
54396060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 379 - 546
Target Start/End: Complemental strand, 35132278 - 35132110
Alignment:
| Q |
379 |
gatgctaagatggataagaaca-gtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaat |
477 |
Q |
| |
|
|||||||||||||| |||| || | || |||||||||||||||||||| || || ||||||||||||| || || || || |||||| | || ||||| |
|
|
| T |
35132278 |
gatgctaagatggacaagagcaagggtagatgatgttgttcttgttggagggtcttctaggattcccaaagtgcagcagctattgcaaaactttttcaaa |
35132179 |
T |
|
| Q |
478 |
gggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
|||||||| | || |||||||| ||||| ||||||||||| |||||||| || ||||| || |||||| |
|
|
| T |
35132178 |
gggaaggagttgtgcaagagcattaaccccgatgaggctgtagcttatggggcagcagttcaggctgct |
35132110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 9336265 - 9336413
Alignment:
| Q |
406 |
gatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaacc |
505 |
Q |
| |
|
|||||| |||||||||| || || ||| |||||||||| || || ||| |||| |||| ||| || ||||| ||||||||| | | | | | ||||||| |
|
|
| T |
9336265 |
gatgatattgttcttgtgggtggctcgtctaggattccgaaagtgcaagaactattgctagaatttttcaaggggaaggaattattcatgggtatcaacc |
9336364 |
T |
|
| Q |
506 |
ctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgag |
554 |
Q |
| |
|
| |||||||||||||||||||| || || || ||||||||||||||||| |
|
|
| T |
9336365 |
cagatgaggctgttgcttatggtgcagctgttcaagctgctattttgag |
9336413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 400 - 522
Target Start/End: Complemental strand, 30775052 - 30774930
Alignment:
| Q |
400 |
agtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagca |
499 |
Q |
| |
|
||||| |||||| |||||||||| || || || ||||||||||||| || || |||| |||| ||||||||||||||||||| | || ||||||| |
|
|
| T |
30775052 |
agtgtagatgatattgttcttgtcggtggttcttctaggattcccaaagtgcaggaactattgcgtaatttcttcaatgggaaggatttgtgcaagagca |
30774953 |
T |
|
| Q |
500 |
tcaaccctgatgaggctgttgct |
522 |
Q |
| |
|
|||| ||||||||||| |||||| |
|
|
| T |
30774952 |
tcaatcctgatgaggcagttgct |
30774930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 35132644 - 35132595
Alignment:
| Q |
4 |
ttcgatcttggtggtggaacttttgatgtttcacttcttactattgagga |
53 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | ||||||||| |||| |
|
|
| T |
35132644 |
ttcgatcttggtggtggcacttttgatgtttcaatacttactattaagga |
35132595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 569
Target Start/End: Original strand, 8017397 - 8017950
Alignment:
| Q |
16 |
ggtggaacttttgatgtttcacttcttactattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggaggtgaagattttgata |
115 |
Q |
| |
|
||||| ||||||||||| || |||||||||||||| || ||||| ||||| || || ||||| ||||||||||| ||| | || |||||||||||||| | |
|
|
| T |
8017397 |
ggtggtacttttgatgtgtctcttcttactattgaagagggtatttttgaagttaaggctactgctggtgatacccatcttggtggtgaagattttgaca |
8017496 |
T |
|
| Q |
116 |
acaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaactgcttgtga |
215 |
Q |
| |
|
|||| ||||| || ||||||||||| || || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||| || |||||||| |
|
|
| T |
8017497 |
acagaatggttaatcattttgttcaggagtttaagaggaagaacaagaaggatattagtggaaaccctagagcacttaggaggttgaggacagcttgtga |
8017596 |
T |
|
| Q |
216 |
gagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactaccattactcgcgctcgt |
315 |
Q |
| |
|
|||||| ||||| ||||| || |||||||| ||||| |||||||| ||||||||||||||||||||| |||| |||||||| || || || || || | |
|
|
| T |
8017597 |
gagagcgaagagaactctctcttctactgcacaaactaccattgagattgattctttgtttgagggtgttgatttttacaccacaatcacccgtgcaaga |
8017696 |
T |
|
| Q |
316 |
tttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatgatgttg |
415 |
Q |
| |
|
||||| || || ||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| ||||||||| |
|
|
| T |
8017697 |
tttgaggaacttaacatggatctgttcagaaagtgtatggagcctgttgagaagtgtttgagagatgctaagatggacaagaactctgttcatgatgttg |
8017796 |
T |
|
| Q |
416 |
ttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggc |
515 |
Q |
| |
|
||||||||||||| || ||||| |||||||| ||||| ||||| |||||||||||||||||||| || || ||||| ||||| |||||||| || ||||| |
|
|
| T |
8017797 |
ttcttgttggcggttcaactagaattcccaaagttcagcaactgttgcaagatttcttcaatggtaaagagctttgcaagagtatcaacccagacgaggc |
8017896 |
T |
|
| Q |
516 |
tgttgcttatggcgctgcagtccaagctgctattttgagcggcgaaggcaatga |
569 |
Q |
| |
|
|||||||||||| || || || ||||| || |||||||| || ||||||||||| |
|
|
| T |
8017897 |
tgttgcttatggtgccgctgtacaagcagcaattttgagtggtgaaggcaatga |
8017950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 13 - 572
Target Start/End: Complemental strand, 8102854 - 8102295
Alignment:
| Q |
13 |
ggtggtggaacttttgatgtttcacttcttactattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggaggtgaagattttg |
112 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| || ||||| ||||| || || ||||| || |||||||| ||| | || ||||||||||||| |
|
|
| T |
8102854 |
ggtggtggtacttttgatgtgtcacttcttactattgaagagggtatatttgaagttaaggctactgcaggtgatacccatcttggtggtgaagattttg |
8102755 |
T |
|
| Q |
113 |
ataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaactgcttg |
212 |
Q |
| |
|
||||||| ||||| | ||||||||||||||| || ||||||||||| ||||| |||||||| ||||| || ||||| ||||| || |||||||| || || |
|
|
| T |
8102754 |
ataacagaatggttacccattttgttcaagagtttaagaggaagaacaagaaggatattagcggaaaccctagggcacttaggagattgagaaccgcatg |
8102655 |
T |
|
| Q |
213 |
tgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactaccattactcgcgct |
312 |
Q |
| |
|
||||||||| ||||| ||||| || || || || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| || || || || || |
|
|
| T |
8102654 |
tgagagagcgaagagaactctctcatcaaccgcacaaactaccattgagattgattctttgtttgagggtgttgatttttacaccacaatcacccgtgcc |
8102555 |
T |
|
| Q |
313 |
cgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatgatg |
412 |
Q |
| |
|
| ||||| || || ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| || || |||||| |
|
|
| T |
8102554 |
agatttgaggaacttaacatggatctgttcaggaagtgtatggagcctgttgagaagtgtttgagagatgctaagatggacaagagcacagttcatgatg |
8102455 |
T |
|
| Q |
413 |
ttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatga |
512 |
Q |
| |
|
||||||||||||| || || |||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||| || || || ||||||||||| || || |
|
|
| T |
8102454 |
ttgttcttgttggtggttcaactaggattcccaaagttcagcaactgttgcaagacttcttcaatggtaaggagctatgcaaaagcatcaaccccgacga |
8102355 |
T |
|
| Q |
513 |
ggctgttgcttatggcgctgcagtccaagctgctattttgagcggcgaaggcaatgagaa |
572 |
Q |
| |
|
||||||||||||||| || || || ||||||||||| ||||| || ||||| |||||||| |
|
|
| T |
8102354 |
ggctgttgcttatggtgccgctgttcaagctgctatcttgagtggtgaaggaaatgagaa |
8102295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 572
Target Start/End: Complemental strand, 39985836 - 39985274
Alignment:
| Q |
10 |
cttggtggtggaacttttgatgtttcacttcttactattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggaggtgaagatt |
109 |
Q |
| |
|
||||||||||| ||||||||||| || | || |||||||| || |||||||||||||||||||| ||||| || || || ||| | |||||||| |||| |
|
|
| T |
39985836 |
cttggtggtggtacttttgatgtctctttgctaactattgaagagggtatctttgaggtgaaagccacagccggagacacccatcttggaggtgaggatt |
39985737 |
T |
|
| Q |
110 |
ttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaactgc |
209 |
Q |
| |
|
|||| ||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| || || ||||| || || || |||||||| |||||||| ||||| |
|
|
| T |
39985736 |
ttgacaacagaatggtgaaccactttgttcaagagttcaagagaaagaacaagaaggacatcagtggcaaccccagagctcttaggaggttgaggactgc |
39985637 |
T |
|
| Q |
210 |
ttgtgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactaccattactcgc |
309 |
Q |
| |
|
|||||| ||||| ||||| ||||| || |||||||| || ||||||||||||||||||||| | ||||| || ||||| || ||| | |||||||||| |
|
|
| T |
39985636 |
ttgtgaaagagcgaagagaactctctcttctactgcccagaccaccattgaaattgattctctttttgaaggaattgatttctactcccccattactcgt |
39985537 |
T |
|
| Q |
310 |
gctcgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatg |
409 |
Q |
| |
|
|| | ||||| ||||||||||||||||| ||||| || ||||||||||| |||||||| |||||||| ||||| |||||||| ||||| |||||| | | |
|
|
| T |
39985536 |
gcaagatttgaggagctcaacatggatctctttagaaaatgtatggagccagttgagaaatgtttgagagatgccaagatggacaagaaaagtgtccacg |
39985437 |
T |
|
| Q |
410 |
atgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctga |
509 |
Q |
| |
|
||||||| ||||| || || || || || ||||| ||||||||||||||||||||||||||||| || || ||||| || || |||||||| || ||||| |
|
|
| T |
39985436 |
atgttgtccttgtaggaggttctaccagaattccaaaggttcaacaacttttgcaagatttctttaacggaaaggagctatgcaagagcataaatcctga |
39985337 |
T |
|
| Q |
510 |
tgaggctgttgcttatggcgctgcagtccaagctgctattttgagcggcgaaggcaatgagaa |
572 |
Q |
| |
|
|||||||||||| ||||| ||||| || || |||||||| ||||| || || ||||||||||| |
|
|
| T |
39985336 |
tgaggctgttgcatatggtgctgctgttcaggctgctatcttgagtggtgagggcaatgagaa |
39985274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 347 - 546
Target Start/End: Complemental strand, 17260094 - 17259895
Alignment:
| Q |
347 |
agtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaa |
446 |
Q |
| |
|
|||| |||||| ||||||||||||| | || |||| |||||| || |||| ||| | ||||||||||| |||||||| ||||| |||||||||| || |
|
|
| T |
17260094 |
agtgcatggagattgttgagaagtgtcttagtgatggtaagattgacaagagcagaattgatgatgttgtccttgttggtggatcttctaggattccgaa |
17259995 |
T |
|
| Q |
447 |
ggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
|| || ||||| ||||| ||||||||||| || |||||| | || ||||||||||||||||||||||||||||||||||| ||||| || || |||||| |
|
|
| T |
17259994 |
agtgcagcaactattgcaggatttcttcaagggtaaggaattatgcaagagcatcaaccctgatgaggctgttgcttatggtgctgctgttcaggctgct |
17259895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 379 - 546
Target Start/End: Complemental strand, 8576147 - 8575980
Alignment:
| Q |
379 |
gatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
478 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||||||||| |||||||| || || |||||||||| || || ||| || || || || | ||||| | |
|
|
| T |
8576147 |
gatgctaagatggacaagaatagtgtagatgatgttgtccttgttggtggttcttctaggattcctaaagtgagacagctattacaggaggttttcaagg |
8576048 |
T |
|
| Q |
479 |
ggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
8576047 |
ggaaggaattatgtaagagcatcaaccctgatgaggctgttgcttatggtgctgttgtccaagctgct |
8575980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 347 - 546
Target Start/End: Complemental strand, 17267792 - 17267593
Alignment:
| Q |
347 |
agtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaa |
446 |
Q |
| |
|
|||| |||||| ||||||||||||| | || ||||||||||| || |||| ||| || ||||||||||| |||||||| || || |||||||||| || |
|
|
| T |
17267792 |
agtgcatggagattgttgagaagtgtcttagtgatgctaagattgacaagagcagagttgatgatgttgtccttgttggtgggtcttctaggattccgaa |
17267693 |
T |
|
| Q |
447 |
ggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
|| || ||||| ||||| | |||||||| ||||||||| | || || || ||||||||||||||||||||||||||||| ||||| || || |||||| |
|
|
| T |
17267692 |
agtgcagcaactattgcagaacttcttcaaggggaaggaattatgcaaaagtatcaaccctgatgaggctgttgcttatggtgctgctgttcaggctgct |
17267593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 380 - 546
Target Start/End: Complemental strand, 8590458 - 8590292
Alignment:
| Q |
380 |
atgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgg |
479 |
Q |
| |
|
||||||||||||| ||||||| ||| ||||||||||| |||||||| || || ||||||||||||| || || || || |||||||| || || | || |
|
|
| T |
8590458 |
atgctaagatggacaagaacattgtagatgatgttgtacttgttggtggttcttctaggattcccaaagtgcagcagctattgcaagacttttttatggg |
8590359 |
T |
|
| Q |
480 |
gaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
|||||| |||| || |||||||| || |||||||||||||||||||| || || || ||||||||| |
|
|
| T |
8590358 |
gaaggatctttacaatagcatcaatccagatgaggctgttgcttatggtgcagctgttcaagctgct |
8590292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 545
Target Start/End: Original strand, 8636699 - 8636856
Alignment:
| Q |
388 |
atggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaac |
487 |
Q |
| |
|
|||||||||| || | | ||||||||||| |||||||| || || |||||||||| ||||| || ||||| || || || | || || | |||||||| |
|
|
| T |
8636699 |
atggataagagcaatatagatgatgttgtccttgttggtggctcctctaggattccaaaggtgcagcaactattacaggacatttttaaggcgaaggaac |
8636798 |
T |
|
| Q |
488 |
tttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgc |
545 |
Q |
| |
|
| ||||||||||||||| |||||||||||||||||||||| || |||||||| ||||| |
|
|
| T |
8636799 |
tgtgtaagagcatcaacgctgatgaggctgttgcttatggagcagcagtccaggctgc |
8636856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 7 - 546
Target Start/End: Original strand, 8382851 - 8383390
Alignment:
| Q |
7 |
gatcttggtggtggaacttttgatgtttcacttcttactattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggaggtgaag |
106 |
Q |
| |
|
|||||||||||||||||||||||||| || || || || ||| || | | |||||| ||||| || || || || || || ||| | |||||||||| |
|
|
| T |
8382851 |
gatcttggtggtggaacttttgatgtgtctctcctcacaattaagaataatgtctttgttgtgaaggccactgccggagacactcatctaggaggtgaag |
8382950 |
T |
|
| Q |
107 |
attttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaac |
206 |
Q |
| |
|
| || |||||||| || ||||| | |||||| | || |||||||||||| |||| || || |||||||| || |||| ||||||||||||||| ||||| |
|
|
| T |
8382951 |
acttagataacagaatcgtgaagtactttgttgacgagttcaagaggaagcataataaggacattagtgggaacccaaaggctcttagaaggttaagaac |
8383050 |
T |
|
| Q |
207 |
tgcttgtgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactaccattact |
306 |
Q |
| |
|
||||| ||||| || || ||||| ||||| | | | | | || | ||||| || ||| || ||| |||||||||||| ||| | || | | ||| |
|
|
| T |
8383051 |
ggcttgcgagagggcaaaaaggacactttcatttgatattgaggccgcgattgacatagatgctctgtatgagggtattgattttaattcttcagtcact |
8383150 |
T |
|
| Q |
307 |
cgcgctcgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcg |
406 |
Q |
| |
|
|| || ||||| | ||||| ||||| |||||| |||||||||||| ||||||||| ||| | | |||||||||||| | |||| ||||| | |
|
|
| T |
8383151 |
cgggccaaatttgagcaactcaatatggacctatttgaaaagtgtatggagactgttgagagctgtcttactgatgctaagatgaacaagagtagtgtag |
8383250 |
T |
|
| Q |
407 |
atgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccc |
506 |
Q |
| |
|
||||||||||||| | || || || | ||||||||||| || ||| | || |||||| | || |||||| ||||||| |||||| |||||| || || |
|
|
| T |
8383251 |
atgatgttgttctcatcggtggttcttcgaggattcccaaagtgcaagagctattgcaacactttttcaattggaaggacctttgtgtgagcataaatcc |
8383350 |
T |
|
| Q |
507 |
tgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
||| ||||||||||||||||| || ||||| |||||||| |
|
|
| T |
8383351 |
tgacgaggctgttgcttatggtgcagcagttaaagctgct |
8383390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 546
Target Start/End: Complemental strand, 8609738 - 8609571
Alignment:
| Q |
379 |
gatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
478 |
Q |
| |
|
|||||| | ||||||||||| | || |||||||||||||||||||| || || |||||||||| || || | || || ||||||| || ||||||| |
|
|
| T |
8609738 |
gatgctgaaatggataagaaaaccgtagatgatgttgttcttgttggaggttcttctaggattccgaaagtgaagcagctactgcaagactttttcaatg |
8609639 |
T |
|
| Q |
479 |
ggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
| ||||| | |||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |||||| |
|
|
| T |
8609638 |
gaaaggatttgtgtatgagcatcaaccctgatgaggcggttgcttatggtgctgctgtccaggctgct |
8609571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 546
Target Start/End: Complemental strand, 8601834 - 8601628
Alignment:
| Q |
340 |
tttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactagga |
439 |
Q |
| |
|
|||| ||||||||| ||| ||||||| | ||| | || |||||| |||| || |||| ||||| ||||||| ||| ||||||||||| || |||||| |
|
|
| T |
8601834 |
tttaagaagtgtatagagactgttgaaagttgtcttagtgatgctcagatcgaaaagagtagtgtggatgatgctgtccttgttggcggttcttctagga |
8601735 |
T |
|
| Q |
440 |
ttcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtcca |
539 |
Q |
| |
|
||||||| || |||||| | || |||| || |||||| ||||||| |||| ||||||||| ||||||||||| ||||| |||||||| ||||| || |
|
|
| T |
8601734 |
ttcccaaagtgcaacaattactgaaagaatttttcaattggaaggacatttgcgtgagcatcaatcctgatgaggcagttgcctatggcgcagcagttca |
8601635 |
T |
|
| Q |
540 |
agctgct |
546 |
Q |
| |
|
||||||| |
|
|
| T |
8601634 |
agctgct |
8601628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 379 - 546
Target Start/End: Complemental strand, 8545454 - 8545287
Alignment:
| Q |
379 |
gatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
478 |
Q |
| |
|
|||||||||||||| ||| ||||| ||||||||||| ||||||||||| || |||||||||| || || ||| || || || || || || || | |
|
|
| T |
8545454 |
gatgctaagatggacaagggtagtgtagatgatgttgtccttgttggcggttcttctaggattcctaaagtgagacagctattacaggagttttttaagg |
8545355 |
T |
|
| Q |
479 |
ggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
|||||||| | || |||||||| |||||||||||||||||||||||||| || || ||||| |||||| |
|
|
| T |
8545354 |
ggaaggaattatgcaagagcattaaccctgatgaggctgttgcttatggtgcagctgtccaggctgct |
8545287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 527
Target Start/End: Original strand, 7878080 - 7878228
Alignment:
| Q |
379 |
gatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
478 |
Q |
| |
|
||||||| |||||| ||||||| ||| ||||||||||| |||||||| ||||| ||||||||| ||| || || || || ||||| || || || || | |
|
|
| T |
7878080 |
gatgctatgatggacaagaacaatgtagatgatgttgtacttgttggtggatcatctaggattctcaaagtgcagcagctattgcaggacttttttaagg |
7878179 |
T |
|
| Q |
479 |
ggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatgg |
527 |
Q |
| |
|
||||||| |||| | ||||||||||| ||||| |||||||||||||| |
|
|
| T |
7878180 |
ggaaggatatttgcagtagcatcaacccggatgaagctgttgcttatgg |
7878228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 556
Target Start/End: Complemental strand, 6789330 - 6789156
Alignment:
| Q |
382 |
gctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatggga |
481 |
Q |
| |
|
||||||||||| |||| | ||| |||||||||| |||||||| || || |||| |||||||| || |||||||| |||||||| | |||| || | |
|
|
| T |
6789330 |
gctaagatggacaagagtattgtaaatgatgttgtccttgttggtgggtcttctagaattcccaaagtgcaacaactattgcaagaagttttcatgggaa |
6789231 |
T |
|
| Q |
482 |
aggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgagcg |
556 |
Q |
| |
|
|||| | || | |||||||||||||||||||||||||||||| || || || ||||| |||||| | ||||||| |
|
|
| T |
6789230 |
aggatttgtgcatgagcatcaaccctgatgaggctgttgcttacggtgcagctgtccaggctgctttgttgagcg |
6789156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 379 - 533
Target Start/End: Complemental strand, 8581521 - 8581367
Alignment:
| Q |
379 |
gatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
478 |
Q |
| |
|
|||||||||||||| | | ||||| ||||||||||| |||||||| || || |||||||||| || || ||| || || || || || ||| | | |
|
|
| T |
8581521 |
gatgctaagatggacaggggtagtgtagatgatgttgtccttgttggtggttcttctaggattcctaaagtgagacagctattacaggagtttttccagg |
8581422 |
T |
|
| Q |
479 |
ggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgc |
533 |
Q |
| |
|
|||||||| | || ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8581421 |
ggaaggaattatgcaagagcatcaaccctgatgaggctgttgcttatggtgctgc |
8581367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 524
Target Start/End: Complemental strand, 8570132 - 8569987
Alignment:
| Q |
379 |
gatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
478 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||||||||| |||||||| || || |||||||||| || || || || || ||||| || ||| | | |
|
|
| T |
8570132 |
gatgctaagatggaaaagaatagtgtagatgatgttgtccttgttggtggttcttctaggattcctaaagtgaggcagctattacaagagtttttccagg |
8570033 |
T |
|
| Q |
479 |
ggaaggaactttgtaagagcatcaaccctgatgaggctgttgctta |
524 |
Q |
| |
|
|||||||| | || || ||||| ||||||||||||||||||||||| |
|
|
| T |
8570032 |
ggaaggaattatgcaacagcattaaccctgatgaggctgttgctta |
8569987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 236
Target Start/End: Complemental strand, 8581805 - 8581664
Alignment:
| Q |
95 |
tgggaggtgaagattttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttag |
194 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| || ||||| || |||||||| || |||| | || |||| ||||||||||| || |||| |
|
|
| T |
8581805 |
tgggaggggaagattttgataacagaatggtgaatcactttgtgtcggagttcaagagaaaacataaagaggagattattggaaatccaaaagccattag |
8581706 |
T |
|
| Q |
195 |
aaggttgagaactgcttgtgagagagctaagaggactctttc |
236 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||| ||||| |
|
|
| T |
8581705 |
aaggttgaggactgcttgtgagagagcgaaaaggacactttc |
8581664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 8537758 - 8537679
Alignment:
| Q |
478 |
gggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgagcgg |
557 |
Q |
| |
|
|||||||| ||| ||| ||||||||||||||||| |||||||||||||| ||||| ||||| |||||| | |||||||| |
|
|
| T |
8537758 |
gggaaggatatttttaaaagcatcaaccctgatgaagctgttgcttatggtgctgctgtccaggctgctttgttgagcgg |
8537679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 434 - 527
Target Start/End: Original strand, 29582243 - 29582336
Alignment:
| Q |
434 |
ctaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatgg |
527 |
Q |
| |
|
|||| |||||||| || || || || |||||||| || ||||| |||||||| | || | ||||||||||||||||||||||||||||||||| |
|
|
| T |
29582243 |
ctagaattcccaaagtgcatcagctattgcaagaatttttcaaggggaaggatttgtgcatgagcatcaaccctgatgaggctgttgcttatgg |
29582336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 10494748 - 10494896
Alignment:
| Q |
406 |
gatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaacc |
505 |
Q |
| |
|
|||||| |||||||||| || || ||| ||||||||||||| || || | || |||| ||| || ||||| ||||||||| | | | | | ||||||| |
|
|
| T |
10494748 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
10494847 |
T |
|
| Q |
506 |
ctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgag |
554 |
Q |
| |
|
| |||||||||||||||||||| || || || || |||||||||||||| |
|
|
| T |
10494848 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgag |
10494896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 7877810 - 7877931
Alignment:
| Q |
109 |
tttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaactg |
208 |
Q |
| |
|
||||||||||| ||| |||||||||| || || || |||||||||||||| || ||| ||||||| || ||||| ||||| ||||||||||||| |
|
|
| T |
7877810 |
tttgataacagaatgttgaaccatttagtgatggagtttaagaggaagaataaagtggacattggtggaaacccgagggcccttaggaggttgagaactg |
7877909 |
T |
|
| Q |
209 |
cttgtgagagagctaagaggac |
230 |
Q |
| |
|
| |||||||| ||||| ||||| |
|
|
| T |
7877910 |
catgtgagagggctaaaaggac |
7877931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 8609954 - 8609881
Alignment:
| Q |
163 |
aaagatattagtggaaatccaagggctcttagaaggttgagaactgcttgtgagagagctaagaggactctttc |
236 |
Q |
| |
|
|||||||| ||||| || | ||||||||||| |||||||| |||||||||||||| || |||||||| ||||| |
|
|
| T |
8609954 |
aaagatatcagtgggaactcgagggctcttaggaggttgaggactgcttgtgagagggcaaagaggacactttc |
8609881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 546
Target Start/End: Complemental strand, 3146974 - 3146918
Alignment:
| Q |
490 |
tgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||| || || || ||||||||| |
|
|
| T |
3146974 |
tgtaacagcatcaaccctgatgaggccgttgcttatggtgcagctgtgcaagctgct |
3146918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 530
Target Start/End: Complemental strand, 8646670 - 8646547
Alignment:
| Q |
407 |
atgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccc |
506 |
Q |
| |
|
||||||||||||||||||| || || |||| ||||| || || ||||| | || | || || ||||||| ||||||| | || ||||||||||||| |
|
|
| T |
8646670 |
atgatgttgttcttgttggtggctcctctagaattccaaaagtacaacagatgctgaaggagtttttcaatgagaaggaattatgcgagagcatcaaccc |
8646571 |
T |
|
| Q |
507 |
tgatgaggctgttgcttatggcgc |
530 |
Q |
| |
|
||||| ||| |||||||||||||| |
|
|
| T |
8646570 |
tgatgtggccgttgcttatggcgc |
8646547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 554
Target Start/End: Complemental strand, 8654151 - 8654096
Alignment:
| Q |
499 |
atcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgag |
554 |
Q |
| |
|
|||||||| ||||||||| |||| ||||||||||| || || |||||||||||||| |
|
|
| T |
8654151 |
atcaacccagatgaggctattgcatatggcgctgctgttcaggctgctattttgag |
8654096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 554
Target Start/End: Original strand, 13333835 - 13333890
Alignment:
| Q |
499 |
atcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgag |
554 |
Q |
| |
|
|||||||| |||||||||||||||||||| || || || || |||||||||||||| |
|
|
| T |
13333835 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgag |
13333890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 8602167 - 8602133
Alignment:
| Q |
7 |
gatcttggtggtggaacttttgatgtttcacttct |
41 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8602167 |
gatcttggtggtggaacttttgatgtttctcttct |
8602133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 523
Target Start/End: Original strand, 27846567 - 27846597
Alignment:
| Q |
493 |
aagagcatcaaccctgatgaggctgttgctt |
523 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27846567 |
aagagcatcaaccctgatgaggctgttgctt |
27846597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 8590656 - 8590608
Alignment:
| Q |
182 |
caagggctcttagaaggttgagaactgcttgtgagagagctaagaggac |
230 |
Q |
| |
|
||||||||||||| ||||||| ||| ||||||||||| ||||| ||||| |
|
|
| T |
8590656 |
caagggctcttaggaggttgaaaacagcttgtgagagggctaaaaggac |
8590608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 135; Significance: 5e-70; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 10 - 536
Target Start/End: Original strand, 17716665 - 17717191
Alignment:
| Q |
10 |
cttggtggtggaacttttgatgtttcacttcttactattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggaggtgaagatt |
109 |
Q |
| |
|
||||||||||| ||||||||||| || | || |||||||| || ||| |||| |||| ||||||||||| || || | ||| | |||||||| |||| |
|
|
| T |
17716665 |
cttggtggtggtacttttgatgtctctttgctaactattgaagagtgtaactttcaggttaaagctacagccggagacgcccatcttggaggtgaggatt |
17716764 |
T |
|
| Q |
110 |
ttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaactgc |
209 |
Q |
| |
|
|| ||||||| ||||||||||| ||||||| ||| |||||||| ||||| ||||| || |||||||| || ||||| ||||||| |||||||| ||||| |
|
|
| T |
17716765 |
ttaataacagaatggtgaaccactttgttcgagagttcaagagaaagaacaagaaggacattagtggcaacccaagagctcttatgaggttgaggactgc |
17716864 |
T |
|
| Q |
210 |
ttgtgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactaccattactcgc |
309 |
Q |
| |
|
||||||||| || ||||| |||| || |||||||| || ||||||||||||||||||| | | |||||||| ||||| || || || |||||||||| |
|
|
| T |
17716865 |
ttgtgagagggcgaagagagctctatcatctactgcccagaccaccattgaaattgattgtctatttgagggaattgatttctatacccccattactcgt |
17716964 |
T |
|
| Q |
310 |
gctcgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatg |
409 |
Q |
| |
|
|| | ||||||||||||||| ||||||| || ||| | |||||||||| |||||||| |||||||| ||||| |||| | || |||||| ||| |
|
|
| T |
17716965 |
gccagatttgaagagctcaacttggatctcttcagggaatgtatggagcaagttgagaaatgtttgagccatgctgggatgtacaaaggaagtgtccatg |
17717064 |
T |
|
| Q |
410 |
atgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctga |
509 |
Q |
| |
|
||||||| ||||| || || || || || ||||| |||||||||||||| ||||| |||||||| || | ||||| || || |||||||| || || || |
|
|
| T |
17717065 |
atgttgtccttgtaggaggttctaccagaattccaaaggttcaacaactattgcaggatttctttaacagaaaggagctatgcaagagcattaatcccga |
17717164 |
T |
|
| Q |
510 |
tgaggctgttgcttatggcgctgcagt |
536 |
Q |
| |
|
|||||||||||| ||||| || ||||| |
|
|
| T |
17717165 |
tgaggctgttgcatatggtgcggcagt |
17717191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 97 - 536
Target Start/End: Original strand, 17648106 - 17648545
Alignment:
| Q |
97 |
ggaggtgaagattttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaa |
196 |
Q |
| |
|
|||||||| |||||| ||||||| |||||||| || |||||||||| |||||||| ||||| ||||| || |||||||| || ||||| ||||||| | |
|
|
| T |
17648106 |
ggaggtgaggattttaataacagaatggtgaatcactttgttcaagtgttcaagagaaagaacaagaaggacattagtggcaacccaagagctcttatga |
17648205 |
T |
|
| Q |
197 |
ggttgagaactgcttgtgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacac |
296 |
Q |
| |
|
||||||| ||||||||||||| || ||||| ||||| || | |||| |||||||||||||||||||||| | | || ||||| ||||| || | | | |
|
|
| T |
17648206 |
ggttgaggactgcttgtgagaaggccaagagaactctatcatttactctccaaaccaccattgaaattgattgtctattcgagggaattgatttctgctc |
17648305 |
T |
|
| Q |
297 |
taccattactcgcgctcgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataag |
396 |
Q |
| |
|
|||||||||| || | ||||| ||||||||||||||||| |||||||| |||||||||| ||||||| |||||||| ||||||| |||||| || |
|
|
| T |
17648306 |
ctccattactcgtgcaagatttgaggagctcaacatggatctctttaggaaatgtatggagcaagttgagatatgtttgagagatgctaggatggacaaa |
17648405 |
T |
|
| Q |
397 |
aacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaaga |
496 |
Q |
| |
|
|| |||||| ||||| |||| ||||| ||||| || || || ||||| |||||||||||||| ||||| |||||||| | || ||||| || || || | |
|
|
| T |
17648406 |
aaaagtgtccatgatattgtccttgtaggcggttctacaagaattccaaaggttcaacaactattgcaggatttctttgacggaaaggagctatgcaata |
17648505 |
T |
|
| Q |
497 |
gcatcaaccctgatgaggctgttgcttatggcgctgcagt |
536 |
Q |
| |
|
|||| || || |||||||||||||| ||||| |||||||| |
|
|
| T |
17648506 |
gcattaatcccgatgaggctgttgcatatggtgctgcagt |
17648545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 97 - 536
Target Start/End: Original strand, 17622010 - 17622449
Alignment:
| Q |
97 |
ggaggtgaagattttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaa |
196 |
Q |
| |
|
|||||||| |||||| ||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| || || ||||| || ||||| ||||||| | |
|
|
| T |
17622010 |
ggaggtgaggattttaataacagaatggtgaaccactttgttcaagagttcaagagaaagaacaagaaggacatcagtggcaacccaagagctcttatga |
17622109 |
T |
|
| Q |
197 |
ggttgagaactgcttgtgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacac |
296 |
Q |
| |
|
||||||| ||||||||||||| || ||||| ||||| || | ||||| |||||||||||||||||||||| | | || ||||| ||||| || | | | |
|
|
| T |
17622110 |
ggttgaggactgcttgtgagaaggccaagagaactctatcatttactgtccaaaccaccattgaaattgattgtctattcgagggaattgatttctgctc |
17622209 |
T |
|
| Q |
297 |
taccattactcgcgctcgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataag |
396 |
Q |
| |
|
|||||||||| || |||||| |||||||||||||||| |||||||| |||||||||| |||||||| |||||||| |||||| |||||| || |
|
|
| T |
17622210 |
ccccattactcgtgccacatttgaaaagctcaacatggatctctttaggaaatgtatggagcaagttgagaaatgtttgagaaatgctaggatggacaaa |
17622309 |
T |
|
| Q |
397 |
aacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaaga |
496 |
Q |
| |
|
| |||||| |||||||||| ||||| || || || || || ||||| |||||||||||| | ||||| |||||||| || || ||||| || || || | |
|
|
| T |
17622310 |
acaagtgtccatgatgttgtccttgtaggaggttctaccagaattccaaaggttcaacaattattgcaggatttctttaacggaaaggagctatgcaata |
17622409 |
T |
|
| Q |
497 |
gcatcaaccctgatgaggctgttgcttatggcgctgcagt |
536 |
Q |
| |
|
|||| || || || ||||||||||| | ||| |||||||| |
|
|
| T |
17622410 |
gcattaatcccgacgaggctgttgcgtgtggtgctgcagt |
17622449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 10 - 536
Target Start/End: Original strand, 17717926 - 17718455
Alignment:
| Q |
10 |
cttggtggtggaacttttgatgtttcacttct---tactattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggaggtgaag |
106 |
Q |
| |
|
||||||||||| ||||||||||| || | || ||||||||| || ||| |||| |||| ||||||||||| || || | ||| | |||||||| | |
|
|
| T |
17717926 |
cttggtggtggtacttttgatgtctctttgctaactactattgaagagtgtaactttcaggttaaagctacagccggagacgcccatcttggaggtgagg |
17718025 |
T |
|
| Q |
107 |
attttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaac |
206 |
Q |
| |
|
||||| ||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| || |||||||| || ||||| ||||||| | |||||| || |
|
|
| T |
17718026 |
attttaataacagaatggtgaaccactttgttcaagagttcaagagaaagaacaagaaggacattagtggcaacccaagagctcttatgaagttgaggac |
17718125 |
T |
|
| Q |
207 |
tgcttgtgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactaccattact |
306 |
Q |
| |
|
|||||||||||| || ||||| |||| || |||||| | || ||||||||||||||||||| | | |||||||| ||||| || || || |||||||| |
|
|
| T |
17718126 |
tgcttgtgagagggcgaagagagctctatcatctacttcccagaccaccattgaaattgattgtctatttgagggaattgatttctatacccccattact |
17718225 |
T |
|
| Q |
307 |
cgcgctcgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcg |
406 |
Q |
| |
|
|| || | ||||||||||||||| ||||||| || ||| | |||||||||| |||||||| |||||||| |||| |||| | || |||||| |
|
|
| T |
17718226 |
cgtgccagatttgaagagctcaacttggatctcttcagggaatgtatggagcaagttgagaaatgtttgagacgtgctgggatgaacaaaggaagtgtcc |
17718325 |
T |
|
| Q |
407 |
atgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccc |
506 |
Q |
| |
|
|||||||||| ||||| || || || || | ||||| |||||||||||||| | ||| ||| |||| || || ||||| || || |||||||| || || |
|
|
| T |
17718326 |
atgatgttgtccttgtaggaggttctaccaaaattccaaaggttcaacaactatggcaggatgtctttaacggaaaggatctatgcaagagcattaatcc |
17718425 |
T |
|
| Q |
507 |
tgatgaggctgttgcttatggcgctgcagt |
536 |
Q |
| |
|
|||||||||||||| ||||| |||||||| |
|
|
| T |
17718426 |
cgatgaggctgttgcatatggtgctgcagt |
17718455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 43 - 534
Target Start/End: Original strand, 17666694 - 17667185
Alignment:
| Q |
43 |
actattgaggaaggtatctttgaggtgaaagctacagctggtgatacacatttgggaggtgaagattttgataacaggatggtgaaccattttgttcaag |
142 |
Q |
| |
|
|||||||| || |||||| ||| ||| ||||||||| | || || | ||| | |||||||| |||||| ||||||| |||||||| || |||||||||| |
|
|
| T |
17666694 |
actattgaagagggtatcattggggttaaagctacaaccggagacccccatcttggaggtgaggattttaataacagaatggtgaatcactttgttcaag |
17666793 |
T |
|
| Q |
143 |
aattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaactgcttgtgagagagctaagaggactctttcctctac |
242 |
Q |
| |
|
| ||||| || ||||| || || || || ||||| || ||||| ||||||| |||||| | |||||||||||||| || ||||| |||| || ||||| |
|
|
| T |
17666794 |
agttcaaaagaaagaacaacaaggacatcagtggcaacccaagagctcttatgaggttggggactgcttgtgagagggcgaagagagctctatcatctac |
17666893 |
T |
|
| Q |
243 |
tgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacactaccattactcgcgctcgttttgaagagctcaacatggatctattt |
342 |
Q |
| |
|
|||||| ||||||||||||||||| | | | || ||||| ||||| || | | | ||||||||| || ||||||||||||||||||||||| ||| |
|
|
| T |
17666894 |
tgctcagaccaccattgaaattgaatgtctattcgagggaattgatttctgctccttcattactcgtgccacatttgaagagctcaacatggatctcttt |
17666993 |
T |
|
| Q |
343 |
aggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattc |
442 |
Q |
| |
|
||||| |||||||||| |||||||| |||||||| ||||||||||||| || | |||||| |||||||||| ||||| || || || || || |||| |
|
|
| T |
17666994 |
aggaaatgtatggagcaagttgagaaatgtttgagaaatgctaagatggacaaaagaagtgtccatgatgttgtccttgtaggaggttctaccagaattc |
17667093 |
T |
|
| Q |
443 |
ccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgca |
534 |
Q |
| |
|
| |||||||||||| | ||||| |||||||| || || ||||| || || || ||||| || || | |||||||||| ||||| |||||| |
|
|
| T |
17667094 |
caaaggttcaacaattattgcaggatttctttaacggaaaggagctatgcaatagcattaatcccaacgaggctgttgtgtatggtgctgca |
17667185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 97 - 473
Target Start/End: Original strand, 17704120 - 17704496
Alignment:
| Q |
97 |
ggaggtgaagattttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaa |
196 |
Q |
| |
|
|||||||| |||||| ||||||| ||||||||| | ||||||||||| |||||||| ||||| | ||| || || ||||| | | ||| ||||||| | |
|
|
| T |
17704120 |
ggaggtgaggattttaataacagaatggtgaactactttgttcaagagttcaagagaaagaacaggaaggacatcagtggcgaccaaagagctcttatga |
17704219 |
T |
|
| Q |
197 |
ggttgagaactgcttgtgagagagctaagaggactctttcctctactgctcaaaccaccattgaaattgattctttgtttgagggtattgacttttacac |
296 |
Q |
| |
|
||||||| ||||||||||||| || ||||| ||||| || | |||| ||||||||||||||||||| || ||| || |||| || || || | ||| |
|
|
| T |
17704220 |
ggttgaggactgcttgtgagaaggccaagagaactctatcatttactctccaaaccaccattgaaattgtttgtttattcaagggaatggatttcttcac |
17704319 |
T |
|
| Q |
297 |
taccattactcgcgctcgttttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataag |
396 |
Q |
| |
|
| ||||||||| || | ||||||||||||||||||||||| |||| ||| ||||||||| |||| ||||| |||||| ||||| |||||| || |
|
|
| T |
17704320 |
catcattactcgtgccagatttgaagagctcaacatggatctctttatgaaatgtatggagactgtcgagaaacttttgagatttgctaggatggacaaa |
17704419 |
T |
|
| Q |
397 |
aacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttctt |
473 |
Q |
| |
|
| |||||| |||||||||| ||||| || || || || || ||||| |||||||||||||| ||||| |||||||| |
|
|
| T |
17704420 |
acaagtgtccatgatgttgtccttgtaggaggttctaccagaattccaaaggttcaacaactattgcaggatttctt |
17704496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 316 - 536
Target Start/End: Original strand, 17705997 - 17706216
Alignment:
| Q |
316 |
tttgaagagctcaacatggatctatttaggaagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatgatgttg |
415 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||| |||||||| |||||||| |||||||||||||| || || |||||| ||||||||| |
|
|
| T |
17705997 |
tttgaagagctcaacatggatctctttaggaaatgtatggagcaagttgagaaatgtttgagagatgctaagatggacaaaaaaagtgtccatgatgttg |
17706096 |
T |
|
| Q |
416 |
ttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggc |
515 |
Q |
| |
|
| ||||| || || || || || ||||| ||||||||| ||| | |||| |||||||| | || ||||| || || || ||||| || || |||||||| |
|
|
| T |
17706097 |
tccttgtaggaggttctaccagaattccaaaggttcaaaaac-tatgcaggatttctttgacggaaaggagctatgcaatagcattaatcccgatgaggc |
17706195 |
T |
|
| Q |
516 |
tgttgcttatggcgctgcagt |
536 |
Q |
| |
|
|||||| ||||| |||||||| |
|
|
| T |
17706196 |
tgttgcatatggtgctgcagt |
17706216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 406 - 546
Target Start/End: Original strand, 12245780 - 12245920
Alignment:
| Q |
406 |
gatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaacc |
505 |
Q |
| |
|
|||||| |||| |||||||| ||||| ||||||||||||| || ||||| || || || || || ||||| ||||||||| | || |||||||| |||| |
|
|
| T |
12245780 |
gatgattttgtacttgttggtggatcttctaggattcccaaagtccaacagctattacaggactttttcaacgggaaggaattgtgcaagagcattaacc |
12245879 |
T |
|
| Q |
506 |
ctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
|||| ||||||||||||||||| || || || ||||||||| |
|
|
| T |
12245880 |
ctgacgaggctgttgcttatggggcagctgttcaagctgct |
12245920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 546
Target Start/End: Original strand, 16662429 - 16662506
Alignment:
| Q |
469 |
ttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| || || || ||||||||| |
|
|
| T |
16662429 |
ttcttcaatgggaaggagttgtgcaagagcatcaaccctgatgaggctgttgcttatggggcagctgtgcaagctgct |
16662506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 17705803 - 17705923
Alignment:
| Q |
97 |
ggaggtgaagattttgataacaggatggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaa |
196 |
Q |
| |
|
|||||||| |||||| ||||||| ||||||||||| |||||| |||| |||||||| ||||| ||||| || |||||||| || ||| | ||||||| |
|
|
| T |
17705803 |
ggaggtgaggattttaataacagaatggtgaaccactttgtttaagagttcaagagaaagaagaagaaggacattagtggcaacccatgagctcttatgt |
17705902 |
T |
|
| Q |
197 |
ggttgagaactgcttgtgaga |
217 |
Q |
| |
|
||| ||| ||||||||||||| |
|
|
| T |
17705903 |
ggtcgaggactgcttgtgaga |
17705923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 554
Target Start/End: Complemental strand, 43625203 - 43625058
Alignment:
| Q |
409 |
gatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctg |
508 |
Q |
| |
|
|||||||| ||||||||||| || |||| ||||| || || |||| || ||||| || || ||||| ||||||||| || | ||||| ||||||| |
|
|
| T |
43625203 |
gatgttgtccttgttggcggctcctctagaattccaaaagtaaaacagctgttgcaggagtttttcaaggggaaggaatcatgcgaaagcataaaccctg |
43625104 |
T |
|
| Q |
509 |
atgaggctgttgcttatggcgctgcagtccaagctgctattttgag |
554 |
Q |
| |
|
||||||||||||||||||| || || ||||| |||||||||||||| |
|
|
| T |
43625103 |
atgaggctgttgcttatggtgcagctgtccaggctgctattttgag |
43625058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 406 - 546
Target Start/End: Complemental strand, 11999201 - 11999062
Alignment:
| Q |
406 |
gatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaacc |
505 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||| ||||| || ||||| || || || || || ||||| |||||||| | || |||||||| |||| |
|
|
| T |
11999201 |
gatgatgttgtacttgttggtggatcttctaggat-cccaaagtccaacagctattacatgactttttcaacgggaaggagttgtgcaagagcattaacc |
11999103 |
T |
|
| Q |
506 |
ctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
||||||||||||| |||||||| || || || ||||||||| |
|
|
| T |
11999102 |
ctgatgaggctgtagcttatggggcagctgttcaagctgct |
11999062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 526
Target Start/End: Complemental strand, 12234510 - 12234364
Alignment:
| Q |
379 |
gatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
478 |
Q |
| |
|
|||||||||||||| || | || || ||||| ||||| ||| ||||||| || ||||||||||||| || || ||||| ||||| ||||| ||||| | |
|
|
| T |
12234510 |
gatgctaagatggacaaaagtagggtggatgaagttgtccttattggcgggtcctctaggattcccaaagtgcagcaactattgcaggattttttcaagg |
12234411 |
T |
|
| Q |
479 |
ggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatg |
526 |
Q |
| |
|
||||||| || || ||||| || |||||||| ||||| |||||||||| |
|
|
| T |
12234410 |
ggaaggagctgtgcaagagtattaaccctga-gaggcggttgcttatg |
12234364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 16657891 - 16658039
Alignment:
| Q |
406 |
gatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaacc |
505 |
Q |
| |
|
||||| ||||||||||| || || || ||||||||||||| || || | || |||||||| || ||||| || ||||| | || || || ||||||| |
|
|
| T |
16657891 |
gatgacgttgttcttgtgggtggctcatctaggattcccaaagtgcaggatctattgcaagactttttcaagggcaaggatttatgcaaaagtatcaacc |
16657990 |
T |
|
| Q |
506 |
ctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgag |
554 |
Q |
| |
|
| ||||| ||||||||||| || || || || ||||||||||||||||| |
|
|
| T |
16657991 |
cggatgaagctgttgcttacggtgcagctgttcaagctgctattttgag |
16658039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 527
Target Start/End: Complemental strand, 14703229 - 14703081
Alignment:
| Q |
379 |
gatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
478 |
Q |
| |
|
|||||||||||||| |||| || || ||||||||||||||||| || || || || |||||||||| || || ||| | || || || || ||| | | |
|
|
| T |
14703229 |
gatgctaagatggacaagagtagagtagatgatgttgttcttgtcggtgggtcttctcggattcccaaagtacagcaattattacaggactttttccagg |
14703130 |
T |
|
| Q |
479 |
ggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatgg |
527 |
Q |
| |
|
||||||| | || || ||||| ||||||||||| ||||| |||||||| |
|
|
| T |
14703129 |
ggaaggagttgtgcaacagcattaaccctgatgaagctgtagcttatgg |
14703081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 346 - 527
Target Start/End: Complemental strand, 12528358 - 12528177
Alignment:
| Q |
346 |
aagtgtatggagcctgttgagaagtgtttgagggatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattccca |
445 |
Q |
| |
|
|||||||||||| | ||||| | ||||||| |||||||||||||| |||| ||||| |||||| |||| |||||||| || ||| |||||||||||| |
|
|
| T |
12528358 |
aagtgtatggagaccgttgaaagttgtttgaccgatgctaagatggacaagagtagtgtagatgatattgtacttgttggtggctcgtctaggattccca |
12528259 |
T |
|
| Q |
446 |
aggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatgg |
527 |
Q |
| |
|
| || | || || ||||| || || ||||| || ||||| | | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
12528258 |
aagtgaagcagctattgcaggagtttttcaagggcaaggagttatacaagagcatcaaccctgatgaggctgttgcttatgg |
12528177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 522
Target Start/End: Complemental strand, 43744609 - 43744494
Alignment:
| Q |
407 |
atgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccc |
506 |
Q |
| |
|
||||||||||||||||||| || || |||||||||| || || |||||||| ||||| || || || |||||||| | ||||||| ||| ||||| |
|
|
| T |
43744609 |
atgatgttgttcttgttggtggctcctctaggattccaaaagtacaacaactattgcaggaattttttgcagggaaggatttgtgtaagaacattaaccc |
43744510 |
T |
|
| Q |
507 |
tgatgaggctgttgct |
522 |
Q |
| |
|
||||||||| |||||| |
|
|
| T |
43744509 |
tgatgaggcagttgct |
43744494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 546
Target Start/End: Complemental strand, 15594855 - 15594688
Alignment:
| Q |
379 |
gatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
478 |
Q |
| |
|
|||||||||||| |||||| ||||| ||||| |||| ||||||| || || ||||||||||||| || |||||||| ||| | ||||| ||| | | |
|
|
| T |
15594855 |
gatgctaagatgaataagagtagtgtaaatgatattgtcattgttggtgggtcttctaggattcccaaagtgcaacaactattgaaggattttttcgagg |
15594756 |
T |
|
| Q |
479 |
ggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
| |||||| | || | ||||||||||||||||||||||||||||||||| || || ||||| |||||| |
|
|
| T |
15594755 |
gaaaggaattgtgcatgagcatcaaccctgatgaggctgttgcttatggtgcagctgtccaggctgct |
15594688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 406 - 556
Target Start/End: Original strand, 4678931 - 4679081
Alignment:
| Q |
406 |
gatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaacc |
505 |
Q |
| |
|
||||||||||||||||| || || || | ||||||||||| || || | || |||||||| || || || ||||||| | || ||||| ||||||| |
|
|
| T |
4678931 |
gatgatgttgttcttgtgggtggttcatcgaggattcccaaagtgcaggatctattgcaagacttttttaagcggaaggatttgtgcaagagtatcaacc |
4679030 |
T |
|
| Q |
506 |
ctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgagcg |
556 |
Q |
| |
|
| |||||||||||||||||||| || || ||||||||||||||||||||| |
|
|
| T |
4679031 |
cagatgaggctgttgcttatggtgcagctatccaagctgctattttgagcg |
4679081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 546
Target Start/End: Original strand, 34467135 - 34467302
Alignment:
| Q |
379 |
gatgctaagatggataagaacagtgtcgatgatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatg |
478 |
Q |
| |
|
|||||||||||||| | || ||||| |||||| ||| ||||| || || || ||||||||||||| || || || || |||| || || ||||||| |
|
|
| T |
34467135 |
gatgctaagatggacacgagtagtgtgcatgatgctgtccttgtcgggggctcttctaggattcccaaagtgcagcagctattgcgggactttttcaatg |
34467234 |
T |
|
| Q |
479 |
ggaaggaactttgtaagagcatcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgct |
546 |
Q |
| |
|
| ||||| || || || ||||||||||||||||||||||| ||||||| ||| || || ||||||||| |
|
|
| T |
34467235 |
gtaaggatctatgcaatagcatcaaccctgatgaggctgtcgcttatgtcgcagctgtgcaagctgct |
34467302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 34466906 - 34466991
Alignment:
| Q |
145 |
ttcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaactgcttgtgagagagctaagaggac |
230 |
Q |
| |
|
|||||||||||| |||| || |||||||||||||| || || ||| | || |||||||||||||| || |||| || |||||||| |
|
|
| T |
34466906 |
ttcaagaggaagcataataaggatattagtggaaaccctagagctttgaggaggttgagaactgcgtgcgagaatgcaaagaggac |
34466991 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 409 - 527
Target Start/End: Complemental strand, 28219709 - 28219591
Alignment:
| Q |
409 |
gatgttgttcttgttggcggatcgactaggattcccaaggttcaacaacttttgcaagatttcttcaatgggaaggaactttgtaagagcatcaaccctg |
508 |
Q |
| |
|
||||||||||||||||| || || |||| ||||| || || |||||||| |||| || || || ||||||||| | ||||||||||| ||||||| |
|
|
| T |
28219709 |
gatgttgttcttgttggaggctcctctagaattccaaaagtacaacaactactgcaggaattttttggagggaaggaattgtgtaagagcattaaccctg |
28219610 |
T |
|
| Q |
509 |
atgaggctgttgcttatgg |
527 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
28219609 |
atgaggctgttgcttatgg |
28219591 |
T |
|
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Target: chr6 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 11209471 - 11209371
Alignment:
| Q |
121 |
atggtgaaccattttgttcaagaattcaagaggaagaataagaaagatattagtggaaatccaagggctcttagaaggttgagaactgcttgtgagagag |
220 |
Q |
| |
|
||||||||||||||||| |||| ||| ||||||| | || | || ||||||||||||||||| || ||||| ||| ||| |||||||| ||||||| |
|
|
| T |
11209471 |
atggtgaaccattttgtgaaagagttcttgaggaaggaaaaaatggacattagtggaaatccaagagcccttaggaggctgaagactgcttgcgagagag |
11209372 |
T |
|
| Q |
221 |
c |
221 |
Q |
| |
|
| |
|
|
| T |
11209371 |
c |
11209371 |
T |
|
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