View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16748_low_23 (Length: 323)
Name: NF16748_low_23
Description: NF16748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16748_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 270
Target Start/End: Original strand, 44623723 - 44623974
Alignment:
| Q |
19 |
aaatggaagacttacggaggacggttgaaattaggagaagcgtggttgagtgtataggaggaggaagaagtagaaggcgatgacgtggcatgagttggag |
118 |
Q |
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| T |
44623723 |
aaatggaagacttacggaggacggttgaaattaggagaagcgtggttgagtgtataggaggaagaagaagtagaaggcgatgacgtggcatgagttggag |
44623822 |
T |
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| Q |
119 |
ttggaaagttcatagctggaagaattcttgtttgagtgctttaacaagaagaagtatcgaacccagaagtgaatttgaaggtgataatgataagtttaac |
218 |
Q |
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| T |
44623823 |
ttggaaagttcatagctggaaaaattcttgtttgagtgctttaacaagaagaagtatcgaacccagaagtgaatttgaaggtgataatgataagtttaac |
44623922 |
T |
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| Q |
219 |
c-aactacaattagtatggaggagaatgagttataaacttagcacgtgttgtg |
270 |
Q |
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| T |
44623923 |
caaactacaattagtatggaggagaatgagttat-aacttagcacgtgttgtg |
44623974 |
T |
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