View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16749_high_7 (Length: 248)
Name: NF16749_high_7
Description: NF16749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16749_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 10 - 167
Target Start/End: Complemental strand, 52318246 - 52318089
Alignment:
| Q |
10 |
tgcatagcttcagcttctgcatctccataagttccaactgatttcaagtgtgctacacagttctccataaccttccttgagtactcaggaccactcaatt |
109 |
Q |
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| T |
52318246 |
tgcatagcttcagcttctgcatctccataagttccaactgatttcaagtgtgccacacagttctccataaccttccttgagtactcaggaccactcaatt |
52318147 |
T |
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| Q |
110 |
ccctaatctttgaccctctaattaacttttcaaagggacctaaaacattatcaattta |
167 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52318146 |
ccctaatctttgaccctctaattaacttttcaaagggacctaaaacattatcaattta |
52318089 |
T |
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