View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16750_high_9 (Length: 344)
Name: NF16750_high_9
Description: NF16750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16750_high_9 |
 | |
|
| [»] chr7 (24 HSPs) |
| |
|
| [»] chr4 (4 HSPs) |
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|
Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 24)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 27 - 344
Target Start/End: Original strand, 27830933 - 27831250
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27830933 |
tcaccttggtggagaggactttgataataggatggtgaactattttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
27831032 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
27831033 |
ttgaggaggctgagaacctaatgtgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcattgact |
27831132 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27831133 |
tcttttcaatgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
27831232 |
T |
|
| Q |
327 |
ggacaagagtagtataga |
344 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
27831233 |
ggacaagagtagtataga |
27831250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 27 - 311
Target Start/End: Complemental strand, 8659473 - 8659189
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| |||||||||||||||| || ||||||||||||||||| |||| |||||| |||||||| | ||||||||||||||| ||||||| | || |
|
|
| T |
8659473 |
tcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcc |
8659374 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| |||||| ||||||| || |||| |||||| ||||||||||||||| || ||| ||| ||| ||||| | ||| | |||||| |||| | |||| |
|
|
| T |
8659373 |
ttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcagggaatagact |
8659274 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtct |
311 |
Q |
| |
|
||| |||| ||||||||||| | |||||||||||| |||||||| ||||| ||||| |||||| | ||||||||||||||||| |
|
|
| T |
8659273 |
tctgttcattaatcactcgtgccaggtttgaggaaatgaatatggatctttttaatgagtgtatgaaaactgttgagagttgtct |
8659189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 3147373 - 3147092
Alignment:
| Q |
28 |
caccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcct |
127 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| | || |||||||||| |||| ||||||||| |
|
|
| T |
3147373 |
caccttgggggagaggactttgataataggatggtgaactactttgcacgggagtttaagaagaagaacaaggtagacattagtgagaactcaagagcct |
3147274 |
T |
|
| Q |
128 |
tgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgactt |
227 |
Q |
| |
|
| |||||| ||| ||| || || | |||||| | | ||| |||||| |||| ||| || |||||||||||| | |||||| |||| |||||| |
|
|
| T |
3147273 |
taaggaggttgaaaacggcgtgtgaaagagcaaaacgaatactatcttttgctgtcatcaccaccattgagatagattctttatttcagggatttgactt |
3147174 |
T |
|
| Q |
228 |
cttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgt |
309 |
Q |
| |
|
|||||| | ||||||||||| ||||||||||||||||||||||| ||||||| ||| ||| |||| |||||| |||||||| |
|
|
| T |
3147173 |
attttcatcaatcactcgtgccaagtttgaggaaatcaatatggatcttttcactgagtgtttggaaactgttaagagttgt |
3147092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 313
Target Start/End: Complemental strand, 8654559 - 8654274
Alignment:
| Q |
28 |
caccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcct |
127 |
Q |
| |
|
||||| || ||||| ||||||||||| || |||||| |||||||||| |||| |||||| |||||||| | |||||| ||||| || ||||||| | ||| |
|
|
| T |
8654559 |
cacctagggggagaagactttgataacagaatggtgtactactttgtagaggagttcaaaaagaagaataaagtggaaattagcggtaacccaaaatcct |
8654460 |
T |
|
| Q |
128 |
tgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgactt |
227 |
Q |
| |
|
| |||||| ||||||| || |||| ||||||||||| |||||||||| || ||| ||| ||| ||||| ||||||| |||||| ||| | ||||| |
|
|
| T |
8654459 |
taaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttttacttttgtcaccactgttgaggtagatgctttatttatgggaatcgactt |
8654360 |
T |
|
| Q |
228 |
cttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctca |
313 |
Q |
| |
|
| |||| | ||||||||||| || ||||||||||| ||||||||| |||||||||| ||||| | | |||||| |||||||||| |
|
|
| T |
8654359 |
ttcttcatcaatcactcgtgctaaatttgaggaaattaatatggactttttcaatgagtgtatcaatattgttgacagttgtctca |
8654274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 311
Target Start/End: Complemental strand, 1301570 - 1301286
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||| ||||||||| |||| ||||| |||||||| | ||||||||||||||| |||| | | || |
|
|
| T |
1301570 |
tcaccttggaggagaggactttgataatagaatggtgagctactttgtagaggagttcagaaagaagaataaagtggacattagtggtaaccagaaatcc |
1301471 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| |||||| |||||| || |||| |||||||||||||||||||||| || | | ||| || ||||| | ||| | |||||| |||| | |||| |
|
|
| T |
1301470 |
ttaaggaggttgagaattgcgtgtgagagggcaaaaaggacactctcttttgctttagtcaccaccgttgaggtcgattctttatttcagggaatcgact |
1301371 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtct |
311 |
Q |
| |
|
||| |||| ||||||||||| |||||||||||||| |||||||| ||||| ||||| |||| | || |||||||||||||| |
|
|
| T |
1301370 |
tctgttcattaatcactcgtgccaagtttgaggaaattaatatggatctttttaatgagtgtacaaaaaccgttgagagttgtct |
1301286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 27 - 337
Target Start/End: Complemental strand, 6789622 - 6789312
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| || ||||||||||||||||| | |||| |||||||||| |||| ||| |||| |||||| | |||||| |||| ||| ||| |||| ||| |
|
|
| T |
6789622 |
tcacctcggaggagaggactttgataaccgattggtaaactactttgcagaggagtttaagaggaagaacaaagtggatattactggaaactcaagggcc |
6789523 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| || ||| ||||||| || || | ||| |||||| |||||||||| ||| | ||||||||||||| |||| | |||||| |||||| |||| |
|
|
| T |
6789522 |
ttaagaaggttgagaactgcgtgtgaaagggccaaaagggtactctcttttgttgtcgtcactactattgaggtagactctttatttcagggcatcgact |
6789423 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
|| ||||| | | ||||| || ||||||||||||||||||||||| |||| ||||| |||||| |||| |||||||||||||| |||| ||||||| |
|
|
| T |
6789422 |
tcatttcatcacttactcgggccaagtttgaggaaatcaatatggatatttttaatgagtgtatgaagaccgttgagagttgtcttgttgacgctaagat |
6789323 |
T |
|
| Q |
327 |
ggacaagagta |
337 |
Q |
| |
|
||||||||||| |
|
|
| T |
6789322 |
ggacaagagta |
6789312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 27 - 313
Target Start/End: Original strand, 10494432 - 10494718
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| ||||||||||| ||||| || |||||||| || ||||| |||| |||||| |||||||| | |||||||| |||||||| |||| | || |
|
|
| T |
10494432 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
10494531 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| |||||| ||||||| || |||| ||||||||||| ||||||||||||| ||| ||| || ||||| | ||||| |||||| ||| | |||| |
|
|
| T |
10494532 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgact |
10494631 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctca |
313 |
Q |
| |
|
| | |||| | ||||||||||| || ||||||||||| ||||| ||| |||||| || |||||| | | |||||| |||||||||| |
|
|
| T |
10494632 |
tttcttcatcaatcactcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgacagttgtctca |
10494718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 326
Target Start/End: Original strand, 8585764 - 8586063
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| |||| |||||||||||| || ||| ||||||||||||| |||| || |||| ||||| | ||||| |||| | |||||||||||| |
|
|
| T |
8585764 |
tcaccttgggggaggggactttgataacagaatgttgaactactttgttgaggaatttaagagaaagaacaatgtggatattactaagaacccaagagct |
8585863 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|||||| || | ||||| ||| || ||||||||||||||||| ||||| | | |||||||||||| || ||| |||| ||||||| || | |
|
|
| T |
8585864 |
ttgaggcggttaagaacggcatgtgaaaaggcaaaaaggacactttctttcaaattggtcactactattgaaattgattatttatgtgagggcgtcgatt |
8585963 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
||| |||| | ||||| |||| ||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||| || || |||||||| |
|
|
| T |
8585964 |
tctcttcatcaatcacgcgtgtcaagtttgaggaaatcaatatggacctttttaatgagtgtataaatactgttgagagttgtcttaccgattctaagat |
8586063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 313
Target Start/End: Original strand, 13333514 - 13333800
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| ||||| ||||| ||||| || ||||||||||| ||||| |||| |||||| |||||||| | || || || ||||||||||||| | || |
|
|
| T |
13333514 |
tcaccttgggggagaagacttcgataacagaatggtgaactattttgttgaggagttcaaaaagaagaataacgtcgatatcagtgggaacccaaaatcc |
13333613 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| |||||| ||||||| || |||| || |||||||| |||||| |||||| ||| ||| ||| |||| ||||||| |||||| ||| | |||| |
|
|
| T |
13333614 |
ttaaggaggttgagaactgcctgtgagagggaaaaaaggatactctccttttcttttgtcaccactgttgaagtagatgctttatttatgggaatcgact |
13333713 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctca |
313 |
Q |
| |
|
| | |||| | ||||||||||| || ||||||||||| ||||| ||| |||||| || |||||| | | |||||| |||||||||| |
|
|
| T |
13333714 |
tttcttcatcaatcactcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgacagttgtctca |
13333800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 336
Target Start/End: Complemental strand, 8646987 - 8646678
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| || |||||||||||||||| ||| |||||| || |||||| | | || || |||||||| | |||||||||| ||| ||| |||||||| |
|
|
| T |
8646987 |
tcacctcggaggagaggactttgatagtagaatggtggaccactttgcacaagaatttaacaagaagaacaaggtggacattactggaaactcaagagcc |
8646888 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| |||||| ||||||| |||||||| |||||||||||||| |||||| || | ||| || ||||| ||||| | |||||| | |||| ||||| |
|
|
| T |
8646887 |
ttaaggaggttgagaacggcatgcgagagagcaaaaaggacactatcttttgcttcttgcaccaccattgaattagattctttatttaatggcattgact |
8646788 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
| ||||| | ||||||||||| || ||||| | |||||||||||| || |||| |||||| |||| |||||||||||||||| | ||| | ||||| |
|
|
| T |
8646787 |
ttatttcatcaatcactcgtgccaaatttgacgcaatcaatatggatctgttcatcgaatgtttggaaactgttgagagttgtcataatgatgccaagat |
8646688 |
T |
|
| Q |
327 |
ggacaagagt |
336 |
Q |
| |
|
|||||||||| |
|
|
| T |
8646687 |
ggacaagagt |
8646678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 291
Target Start/End: Complemental strand, 8667529 - 8667265
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| || |||||||| ||||| || ||||||||||| ||||| |||| ||| || |||||||| | ||||||||| ||| |||||||| | || |
|
|
| T |
8667529 |
tcaccttgggggcgaggacttcgataacagaatggtgaactattttgttgaggagttaaaaaagaagaataaagtggacatcagtcagaacccaaaatcc |
8667430 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| |||||| ||||||| || |||| ||||||||||| |||||||||| || ||| || ||| ||||| ||||||| |||||| ||| | |||| |
|
|
| T |
8667429 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttttgcttttgttaccactgttgaggtagatgctttatttacgggaatcgact |
8667330 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatg |
291 |
Q |
| |
|
| | |||| | || |||||||| || ||||||||| | || |||||| |||||||||| |||||| |
|
|
| T |
8667329 |
tttgttcatcaattactcgtgctaaatttgaggaacttaacatggactttttcaatgagtgtatg |
8667265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 186 - 344
Target Start/End: Complemental strand, 8616632 - 8616474
Alignment:
| Q |
186 |
cactactattgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaa |
285 |
Q |
| |
|
||||||||||||||| ||| |||| |||||||| || |||| |||| | |||||||||| ||||||||||||||||||||||||||||| || || |
|
|
| T |
8616632 |
cactactattgagattgattatttatgtgagggcatcgatttctcttcatcaatcactcgtgttaagtttgaggaaatcaatatggacctttttaacgag |
8616533 |
T |
|
| Q |
286 |
tgtatggagactgttgagagttgtctcactgactctaagatggacaagagtagtataga |
344 |
Q |
| |
|
||||| ||||||||||||||||| | | ||| |||||||| || ||||||||| |||| |
|
|
| T |
8616532 |
tgtataaagactgttgagagttgttttaatgattctaagatagagaagagtagtgtaga |
8616474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 304
Target Start/End: Complemental strand, 17260347 - 17260074
Alignment:
| Q |
31 |
cttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaa-gaaaagagtggacattagtgggaacccaagagccttg |
129 |
Q |
| |
|
||||| || ||||||||||||||||| |||||| |||| ||||| |||| | |||| ||||| ||||| | ||||||||| ||||||||||| |||||| |
|
|
| T |
17260347 |
cttgggggtgaggactttgataatagaatggtgtactattttgtagaggagatcaa-aagaacgaaaaaattggacattattgggaacccaaaagcctta |
17260249 |
T |
|
| Q |
130 |
aggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgacttct |
229 |
Q |
| |
|
|||||| ||||||| ||| || || |||||||||||||| |||||| | || || | | ||||| |||| || |||||| |||| | | || | |
|
|
| T |
17260248 |
aggaggttgagaactgcatgtgaaaaagcaaaaaggacactttcttttgcctctgtgaccaatgttgaggtagacgctttatttaagggtgttaattttt |
17260149 |
T |
|
| Q |
230 |
tttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgaga |
304 |
Q |
| |
|
||| | ||||||||||| |||||||| |||||||||||||||||||| |||| || ||||||| |||||||| |
|
|
| T |
17260148 |
cttcgtcaatcactcgtgccaagtttgaagaaatcaatatggaccttttttatgagtgcatggagattgttgaga |
17260074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 8545727 - 8545600
Alignment:
| Q |
43 |
gactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaa |
142 |
Q |
| |
|
||||||||||| || |||||||| ||||||||| ||| |||||||| |||||| | | ||| |||||| |||||||| ||||||||||||| |||||| |
|
|
| T |
8545727 |
gactttgataacagaatggtgaattactttgtgaaggagttcaagaggaagaacaatgaggatattagtcggaacccagaagccttgaggaggttgagaa |
8545628 |
T |
|
| Q |
143 |
cccaatgcgagaaggcaaaaaggacact |
170 |
Q |
| |
|
| || |||||||||||||||||||| |
|
|
| T |
8545627 |
ctgcctgtgagaaggcaaaaaggacact |
8545600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 335
Target Start/End: Complemental strand, 17267838 - 17267741
Alignment:
| Q |
238 |
atcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagag |
335 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||| |||||||| ||||| | ||| ||||||| |||||||| |
|
|
| T |
17267838 |
atcactcgtgccaagtttgaggaaatcaatatggacctttttgatgagtgcatggagattgttgagaagtgtcttagtgatgctaagattgacaagag |
17267741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 8383146 - 8383251
Alignment:
| Q |
239 |
tcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagtag |
338 |
Q |
| |
|
||||||| || || |||||| || ||||||||||||| || | | |||||||||||||||||||| ||||| ||||| |||||||| |||||||||| |
|
|
| T |
8383146 |
tcactcgggccaaatttgagcaactcaatatggacctatttgaaaagtgtatggagactgttgagagctgtcttactgatgctaagatgaacaagagtag |
8383245 |
T |
|
| Q |
339 |
tataga |
344 |
Q |
| |
|
| |||| |
|
|
| T |
8383246 |
tgtaga |
8383251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 29581899 - 29582015
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| || ||||||||||||||||| | |||||||| ||||||| | | | ||| |||| |||||| | ||||||||||||||||||||| ||| |
|
|
| T |
29581899 |
tcacctaggaggagaggactttgataaccgaatggtgaattactttgcgaatgagttgaagaggaagaacaatttggacattagtgggaacccaaaagct |
29581998 |
T |
|
| Q |
127 |
ttgaggaggctgagaac |
143 |
Q |
| |
|
|| |||| ||||||||| |
|
|
| T |
29581999 |
ttaaggaagctgagaac |
29582015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 7877791 - 7877934
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| |||||||||||||||||||| || ||| ||||| | || ||| || ||| |||| |||||| | |||||||||| |||| ||||| || ||| |
|
|
| T |
7877791 |
tcacctaggtggagaggactttgataacagaatgttgaaccatttagtgatggagtttaagaggaagaataaagtggacattggtggaaacccgagggcc |
7877890 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacact |
170 |
Q |
| |
|
| |||||| ||||||| ||| |||| ||| ||||||||||| |
|
|
| T |
7877891 |
cttaggaggttgagaactgcatgtgagagggctaaaaggacact |
7877934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 311
Target Start/End: Complemental strand, 8601918 - 8601800
Alignment:
| Q |
193 |
attgagatagatgccttatttgagggcactgacttcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatgg |
292 |
Q |
| |
|
||||| |||||| ||||||||||||| | ||| ||| |||| | |||||||| || ||||||||| || ||||| ||||||| || || | ||||| | |
|
|
| T |
8601918 |
attgacatagattccttatttgagggtattgatttccattcatcaatcactcgggccaagtttgagcaactcaatgtggacctctttaagaagtgtatag |
8601819 |
T |
|
| Q |
293 |
agactgttgagagttgtct |
311 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
8601818 |
agactgttgaaagttgtct |
8601800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 311
Target Start/End: Original strand, 8673894 - 8673963
Alignment:
| Q |
242 |
ctcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtct |
311 |
Q |
| |
|
||||||| |||||||||||||||||||| | |||||||| || ||| |||| |||||||||| |||||| |
|
|
| T |
8673894 |
ctcgtgccaagtttgaggaaatcaatatcaatcttttcaacgagtgtttggaaactgttgagaattgtct |
8673963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 29577730 - 29577846
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| || ||||||||||| ||||||| ||||||| | |||||||| | | ||| |||| |||||| | |||||||||||| |||||||| ||| |
|
|
| T |
29577730 |
tcacctaggaggagaggacttcgataataaaatggtgagccactttgtgaatgagttgaagaggaagaacaatgtggacattagtttgaacccaaaagct |
29577829 |
T |
|
| Q |
127 |
ttgaggaggctgagaac |
143 |
Q |
| |
|
|| |||| ||||||||| |
|
|
| T |
29577830 |
ttaaggaagctgagaac |
29577846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 8570380 - 8570278
Alignment:
| Q |
68 |
actttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaacccaatgcgagaaggcaaaaaggac |
167 |
Q |
| |
|
|||||||| || ||||||||||||||| | | ||| |||||| ||||||||| ||||||||||||| | ||||| || |||| |||||||||||| |
|
|
| T |
8570380 |
actttgtgaagaagttcaagaagaagaacaacgaggatattagtaggaacccaaaagccttgaggaggttaagaacagcttgtgagagggcaaaaaggac |
8570281 |
T |
|
| Q |
168 |
act |
170 |
Q |
| |
|
||| |
|
|
| T |
8570280 |
act |
8570278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 8664228 - 8664161
Alignment:
| Q |
242 |
ctcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtct |
311 |
Q |
| |
|
||||||| |||| ||| |||||||||||||| |||||||| | ||| |||| ||||||||||||||||| |
|
|
| T |
8664228 |
ctcgtgccaagtatgatgaaatcaatatggatcttttcaacg--tgtttggaaactgttgagagttgtct |
8664161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 8664956 - 8664919
Alignment:
| Q |
241 |
actcgtgcaaagtttgaggaaatcaatatggacctttt |
278 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
8664956 |
actcgtgcgaggtttgaggaaatcaatatggacctttt |
8664919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 27 - 335
Target Start/End: Complemental strand, 43744926 - 43744618
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| || |||||||| |||||||||||||||||||||||||| | |||| ||| ||||||||||| | |||||||||| ||| ||||||||||| |
|
|
| T |
43744926 |
tcacctcggaggagaggattttgataataggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacattactggaaacccaagagca |
43744827 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| |||||| ||||||| |||||| | |||||||||||| | |||||| |||||| ||| ||||||||| ||||| | ||||||||||||| ||| | |
|
|
| T |
43744826 |
ttaaggaggttgagaacagcatgcgaaagagcaaaaaggacattatcttttgctgttgtcaccactattgaggtagattctttatttgagggcattgatt |
43744727 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
||||| |||| ||||||||| | ||||||||||||||||||||||| || ||||| || ||| || | | ||||||||||||||| ||||| | ||||| |
|
|
| T |
43744726 |
tctttacaacaatcactcgtactaagtttgaggaaatcaatatggatctcttcaacgagtgtttgaaaattgttgagagttgtcttactgatgccaagat |
43744627 |
T |
|
| Q |
327 |
ggacaagag |
335 |
Q |
| |
|
||||||||| |
|
|
| T |
43744626 |
ggacaagag |
43744618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 344
Target Start/End: Complemental strand, 12528614 - 12528297
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| |||||||||||||||||| | |||||||| |||||||| | | ||| |||| |||||| | ||| ||||||| ||||||| ||| |||| |
|
|
| T |
12528614 |
tcaccttggaggagaggactttgataatcgaatggtgaatcactttgtgaaagagtttaagaggaagaacaaagttgacattattgggaactcaaaagcc |
12528515 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
| ||||| ||||||| | ||||||||||| ||||||||||| || | | || |||| ||||| |||||||| ||| |||||||| ||||| |
|
|
| T |
12528514 |
ctaaggagattgagaactaactgcgagaaggcgaaaaggacactttcatacgatacagaggctacaattgacatagatgctatatgtgagggcattgact |
12528415 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
||| ||| | |||||||| || ||||| ||| || | ||||||||||| || | | ||||||||||| ||||| |||||| | || || ||||||| |
|
|
| T |
12528414 |
tctgctcatcaatcactcgagccaagttcgagcaactgaatatggacctctttgaaaagtgtatggagaccgttgaaagttgtttgaccgatgctaagat |
12528315 |
T |
|
| Q |
327 |
ggacaagagtagtataga |
344 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
12528314 |
ggacaagagtagtgtaga |
12528297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 27 - 335
Target Start/End: Complemental strand, 28220028 - 28219720
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| || |||||||||||||||| |||||||||||||||||| | |||| ||| ||||||||||| | |||||||||| ||| ||| |||||||| |
|
|
| T |
28220028 |
tcacctcgggggagaggactttgatagtaggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacattactggaaactcaagagcc |
28219929 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| |||||| ||||||| ||| ||| |||||||||||||| |||||| |||||| | | || |||||| ||||| | |||||||| |||| ||| | |
|
|
| T |
28219928 |
ttaaggaggttgagaacagcgtgcaagagagcaaaaaggacactatcttttgctgttgtcgccaccattgaggtagattctttatttgaaggcattgatt |
28219829 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
|||||||| | || |||||||| ||||||||||||||||||||||| ||||||||||| ||| || | ||||||||||| ||||||||||| | || || |
|
|
| T |
28219828 |
tcttttcatcaattactcgtgctaagtttgaggaaatcaatatggatcttttcaatgagtgtttgaaaactgttgagaggtgtctcactgatgccaatat |
28219729 |
T |
|
| Q |
327 |
ggacaagag |
335 |
Q |
| |
|
||||||||| |
|
|
| T |
28219728 |
ggacaagag |
28219720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 109; Significance: 9e-55; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 27 - 311
Target Start/End: Original strand, 16657575 - 16657859
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| ||||||||||||||||| || | ||||||||||||||| |||| ||| | |||||||| | |||||||| ||||||||| |||||||| |
|
|
| T |
16657575 |
tcaccttgggggagaggactttgataacagaacggtgaactactttgtagaggagtttcaaaagaagaataaggtggacataagtgggaactcaagagcc |
16657674 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
||||||||| ||||||| ||| |||| |||||| ||||||||||||||| || ||| ||| ||| ||||| ||||| | |||||| |||| | ||||| |
|
|
| T |
16657675 |
ttgaggaggttgagaactgcatgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtagattctttatttcagggaattgact |
16657774 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtct |
311 |
Q |
| |
|
| | |||| | ||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||| | |||||||||| |||||| |
|
|
| T |
16657775 |
tttcttcatcaatcacccgtgccaagtttgaggaaattaatatggatcttttcaatgagtgtatgaaaactgttgagaattgtct |
16657859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 338
Target Start/End: Complemental strand, 14703518 - 14703207
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| || ||||||||||| ||||| || ||||||||||||||||| | | |||||||| || || ||| ||||||||||||| || |||| |||| |
|
|
| T |
14703518 |
tcacctcgggggagaggacttcgataacagaatggtgaactactttgttcaagagttcaagagaaaaaacagattggacattagtggaaatccaaaagcc |
14703419 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| ||||| |||||||| ||||||| ||||||||| ||||| ||||| |||| | | ||||||||| ||||||| |||||| | ||| ||||| |
|
|
| T |
14703418 |
ttaaggagcttgagaaccgcttgcgagagggcaaaaagaacactttctttccaagttgtcgccactattgaggtagatgctttatttcaatgcattgact |
14703319 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
| | |||| |||||| | | || |||||||| ||||| ||||||||| |||| ||||| ||| || ||| ||||||||||||||| | ||| ||||||| |
|
|
| T |
14703318 |
tttcttcatcgatcaatagggccaagtttgaagaaatgaatatggacttttttaatgagtgtgtgaagattgttgagagttgtcttattgatgctaagat |
14703219 |
T |
|
| Q |
327 |
ggacaagagtag |
338 |
Q |
| |
|
|||||||||||| |
|
|
| T |
14703218 |
ggacaagagtag |
14703207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 27 - 291
Target Start/End: Complemental strand, 7542336 - 7542072
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||| |||||||||||| | | |||||||| ||||| | |||||||||||||||||| |||| |||| |
|
|
| T |
7542336 |
tcaccttggtggagaagactttgataatagaatggcgaactactttgtacaagagttcaagagaaagaacaaagtggacattagtgggaatccaaaagcc |
7542237 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
||||||||| ||||||| || |||| ||||||||| |||| ||||| ||||| | ||||||||| ||||| | |||||| | |||| ||||| |
|
|
| T |
7542236 |
ttgaggaggttgagaactgcttgtgagagggcaaaaagatcactttctttccttgttgttgccactattgaggtagattctttatttcaaggcattgact |
7542137 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatg |
291 |
Q |
| |
|
| | |||| |||||| | | || ||||||||||| || |||||||| ||||| || || |||||| |
|
|
| T |
7542136 |
tttcttcatcgatcaatagggccaagtttgaggagatgaatatggatctttttaacgagtgtatg |
7542072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 337
Target Start/End: Original strand, 12258640 - 12258949
Alignment:
| Q |
28 |
caccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcct |
127 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||| |||||||| || | |||||||| ||||| | ||| || || ||||| || |||||||| | |
|
|
| T |
12258640 |
caccttggaggagaggactttgataatagaatggtgagttactttgtagaagagttcaagagaaagaacaaagtagatataagtggaaatccaagagctt |
12258739 |
T |
|
| Q |
128 |
tgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgactt |
227 |
Q |
| |
|
||||||| ||| ||| || |||| |||||||| |||| |||| | ||||| | ||||||||||||||| | |||| ||| |||| ||| || |
|
|
| T |
12258740 |
tgaggagattgaaaacagcttgtgagagtgcaaaaagatcactttcttatcttgttgttgcaactattgagatagattctttatgtgatggcattgattt |
12258839 |
T |
|
| Q |
228 |
cttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatg |
327 |
Q |
| |
|
| | || | |||| |||||| |||||||||||||| ||| |||| |||||||||||||| ||| ||||||||||||||||||| || || |||| | | |
|
|
| T |
12258840 |
ttctgcatcaatcaatcgtgccaagtttgaggaaataaatttggaacttttcaatgaatgcatgaagactgttgagagttgtcttacggatgctaacacg |
12258939 |
T |
|
| Q |
328 |
gacaagagta |
337 |
Q |
| |
|
|||||||||| |
|
|
| T |
12258940 |
gacaagagta |
12258949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 336
Target Start/End: Complemental strand, 43625522 - 43625213
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| ||||||||||||||| |||| |||||||||||||||| || | || |||||||||| | ||||| |||| ||| ||| |||||||| |
|
|
| T |
43625522 |
tcaccttggaggagaggactttgatgatagaatggtgaactactttgcagaagaatttgagaagaagaacaatgtggatattattggaaactcaagagcc |
43625423 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
| || ||| ||||||| |||||||| | |||||||||||| |||||| || || ||||||||| ||||| | ||||| || | ||||| |
|
|
| T |
43625422 |
ataagaaggttgagaacggcatgcgagagaggaaaaaggacactgtcttttgcttcgttcagcactattgaggtagattctttattccgtggtattgact |
43625323 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
|||||||| | ||||||||||| || ||||| ||||| |||||||| |||||||| || ||| || | |||||| |||||||||| | ||| | ||| | |
|
|
| T |
43625322 |
tcttttcatcaatcactcgtgccaaatttgatgaaataaatatggatcttttcaacgagtgtttgaaaactgttaagagttgtcttattgatgccaagtt |
43625223 |
T |
|
| Q |
327 |
ggacaagagt |
336 |
Q |
| |
|
|||||||||| |
|
|
| T |
43625222 |
ggacaagagt |
43625213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 338
Target Start/End: Complemental strand, 12234799 - 12234488
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| || ||||||||||||||||| || ||||| |||||| ||| | | |||||| | ||||||| ||||||||| ||||| || |||| |||| |
|
|
| T |
12234799 |
tcacctcgggggagaggactttgataacagaatggtaaactaccttgctcaagagttcaatagaaagaaaaaagtggacatgagtggaaatccaaaagcc |
12234700 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
||||||||| | ||||| || |||| ||||||||| || | ||||| ||||| | || |||||| ||||| | |||||||| |||| ||| | |
|
|
| T |
12234699 |
ttgaggaggttaagaactgcttgtgagagggcaaaaagatcattgtctttccttgttgttgcaaccattgaggtagattctttatttgaaggcattgatt |
12234600 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
| | |||| |||||| | | || |||||||||||||| |||||||| ||| | | ||| |||||| ||| ||||||||||||||| | ||| ||||||| |
|
|
| T |
12234599 |
tttcttcatcgatcaatagggccaagtttgaggaaatgaatatggatcttcttattgagtgtatgaagattgttgagagttgtcttagtgatgctaagat |
12234500 |
T |
|
| Q |
327 |
ggacaagagtag |
338 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
12234499 |
ggacaaaagtag |
12234488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 309
Target Start/End: Original strand, 16662050 - 16662332
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| || ||||||||||||||||| || ||| |||||||||||||| | | || || | |||||| | |||||| || | | |||| ||||||||| |
|
|
| T |
16662050 |
tcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcc |
16662149 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
||||||||| ||||||| || || ||||| ||||||||||||||||| | | ||| |||||||||| ||| |||| |||| || ||||| |
|
|
| T |
16662150 |
ttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctctttcaaattggtcaccgctattgagattgattatttatacgaggacattgact |
16662249 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgt |
309 |
Q |
| |
|
||| | || | ||||||||| |||||||| ||||||||||||| |||||| || || |||||| ||| ||||||||||||| |
|
|
| T |
16662250 |
tctctacatcactcactcgtgtcaagtttgaagaaatcaatatgggcctttttaacgagtgtatgaagattgttgagagttgt |
16662332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 344
Target Start/End: Original strand, 12245464 - 12245781
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| |||||||| ||||||||||| ||||| |||||||||| ||| |||||||| ||||| | | |||| ||||||| | ||| |||| |
|
|
| T |
12245464 |
tcaccttggaggagaggattttgataatagaatggtaaactactttgcacaggagttcaagagaaagaacaaattggatattagtgcaagttcaaaagcc |
12245563 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|||||||| ||||||| || |||| ||||||||| | ||| || ||| ||||| | ||||||||| ||||| | |||||| | |||| ||| | |
|
|
| T |
12245564 |
ttgaggagattgagaactgcttgtgagagggcaaaaagaatactttcgtttcttgttgttgcaactattgaggtagattctttatttcaaggcattgatt |
12245663 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagat |
326 |
Q |
| |
|
| | |||| | |||| ||| ||||||||||||||| | ||| | || ||| | ||||| ||||| ||||||||||||||||| | | || | ||||| |
|
|
| T |
12245664 |
tttcttcatccatcaatcgggcaaagtttgaggaattgaatttagatcttcttaatgattgtataaagactgttgagagttgtattatggatgcaaagat |
12245763 |
T |
|
| Q |
327 |
ggacaagagtagtataga |
344 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
12245764 |
ggacaagagtactataga |
12245781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 27 - 311
Target Start/End: Original strand, 4678616 - 4678899
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
|||||| |||||||||||||||||||| || ||||||||||||||||| |||| |||||| |||||||| | |||||||||||| |||| ||| | || |
|
|
| T |
4678616 |
tcacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaaccc |
4678715 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|| |||||| ||||||| ||||||| |||||| |||||||||||||| | ||| ||| ||| ||||| ||||| | |||||| |||| | |||| |
|
|
| T |
4678716 |
ttaaggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgag-tagattctttatttcagggaatagact |
4678814 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtct |
311 |
Q |
| |
|
| | |||| | || |||||||| |||||||||||||| ||||||||||||||||| || |||||||| |||||| |||||||||| |
|
|
| T |
4678815 |
tttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtct |
4678899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 311
Target Start/End: Complemental strand, 15595144 - 15594860
Alignment:
| Q |
27 |
tcaccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
126 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||| |||||||||| | ||| ||||||| |||||| | |||||| |||| |||||||||||| ||| |
|
|
| T |
15595144 |
tcaccttggaggagaggactttgataacagaatggtcaactactttgcgcaggaattcaagacgaagaacaaagtggatattactgggaacccaagggcc |
15595045 |
T |
|
| Q |
127 |
ttgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgact |
226 |
Q |
| |
|
|||||||| ||||||| ||||| | |||||||||| |||||||||| || || |||||| |||||| ||||| |||||| | || | ||||| |
|
|
| T |
15595044 |
ttgaggagattgagaactgcgtgcgaaagggcaaaaagggtactctcttttactactgtcactaccattgaggtagattgtttatttaacggtattgact |
15594945 |
T |
|
| Q |
227 |
tcttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtct |
311 |
Q |
| |
|
|||||||| || | |||||| | |||||||| |||||||| |||||| |||| || || |||||| ||| |||||||||||||| |
|
|
| T |
15594944 |
tcttttcatcggttactcgttccaagtttgaagaaatcaacatggacttttttaaggattgtatgaagatagttgagagttgtct |
15594860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 273
Target Start/End: Original strand, 34466862 - 34467089
Alignment:
| Q |
38 |
gagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagccttgaggaggct |
137 |
Q |
| |
|
||||||||||||||||||| |||| |||| |||||| ||| |||||||| |||| | | ||| |||||||| ||||| ||||| ||||||||| | |
|
|
| T |
34466862 |
gagaggactttgataatagaatggcgaaccactttgcaaaggagttcaagaggaagcataataaggatattagtggaaaccctagagctttgaggaggtt |
34466961 |
T |
|
| Q |
138 |
gagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgacttcttttcaacg |
237 |
Q |
| |
|
|||||| |||||||| ||||| |||||||||| || | | ||||| |||| |||||| | |||| ||||| | ||||||| ||| | |
|
|
| T |
34466962 |
gagaactgcgtgcgagaatgcaaagaggacactcttttgt--------cgctactgttgaaatagattctttatatgaggtaattgacttccattcgtca |
34467053 |
T |
|
| Q |
238 |
atcactcgtgcaaagtttgaggaaatcaatatggac |
273 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |
|
|
| T |
34467054 |
atcactcgtgccaagtttgaggaaatcaatatggac |
34467089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 52549293 - 52549353
Alignment:
| Q |
250 |
aagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtc |
310 |
Q |
| |
|
|||||||||||||| |||||||||||||| || || |||||| ||| |||||| ||||||| |
|
|
| T |
52549293 |
aagtttgaggaaatgaatatggacctttttaaggagtgtatgaagattgttgaaagttgtc |
52549353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 37 - 344
Target Start/End: Complemental strand, 30775352 - 30775045
Alignment:
| Q |
37 |
ggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagccttgaggaggc |
136 |
Q |
| |
|
||||||||||||||||| || ||| |||| |||||||| |||| || |||| |||||| | |||||||||| ||||| |||||||| ||||| | |
|
|
| T |
30775352 |
ggagaggactttgataacagaatgttgaattactttgtagaggaatttaagacgaagaacaacgtggacattaccgggaatccaagagctttgagacagt |
30775253 |
T |
|
| Q |
137 |
tgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgacttcttttcaac |
236 |
Q |
| |
|
||||||| ||| || |||||||||||||||||||| || || ||| | ||||||||||| |||||| | | || |||||| | |||| | |
|
|
| T |
30775252 |
tgagaactgcatgtgaaaaggcaaaaaggacactctccttcaagtttctcacatttgttgagatagataatttatttcaagacattgacttttcttcatc |
30775153 |
T |
|
| Q |
237 |
gatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagt |
336 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||| || ||| | ||||||||| |
|
|
| T |
30775152 |
aatcactcgtgtcaagtttgaggaaatcaatatggacctttttaatgagtgtatacagactgttgagagttgtcttactgattcaaaggtagacaagagt |
30775053 |
T |
|
| Q |
337 |
agtataga |
344 |
Q |
| |
|
||| |||| |
|
|
| T |
30775052 |
agtgtaga |
30775045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 28 - 291
Target Start/End: Original strand, 9335950 - 9336213
Alignment:
| Q |
28 |
caccttggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcct |
127 |
Q |
| |
|
|||||||| || |||||||||||||| || ||||| ||||| |||||||| | ||| || |||||||| | ||||||||| | |||||||| | ||| |
|
|
| T |
9335950 |
caccttggaggcgaggactttgataacagaatggttaactattttgtggaagagttaaaaaagaagaataaagtggacatcaagcagaacccaaaatcct |
9336049 |
T |
|
| Q |
128 |
tgaggaggctgagaacccaatgcgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcactgactt |
227 |
Q |
| |
|
| |||||| ||||||| || |||| ||||||||||| ||| |||||| || ||| || ||| ||||| ||||||| |||||| ||| | ||||| |
|
|
| T |
9336050 |
taaggaggttgagaactgcctgtgagagggcaaaaaggatactgtcttttgcttttgttaccactgttgaggtagatgctttatttatgggaatcgactt |
9336149 |
T |
|
| Q |
228 |
cttttcaacgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatg |
291 |
Q |
| |
|
| |||| | ||||||||||| || ||||||||| | || |||||| |||||||||| |||||| |
|
|
| T |
9336150 |
ttcttcatcaatcactcgtgccaaatttgaggaacttaacatggactttttcaatgagtgtatg |
9336213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 35132551 - 35132454
Alignment:
| Q |
34 |
ggtggagaggactttgataataggatggtgaactactttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagccttgag |
131 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||| | | |||||||| ||||| | ||| |||||||||||||| ||| ||||||||| |
|
|
| T |
35132551 |
ggtggagaggactttgataacagaatggtgaactactttgtacaagagttcaagagaaagaacaaagtagacattagtgggaattcaaaagccttgag |
35132454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 35132344 - 35132259
Alignment:
| Q |
250 |
aagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagag |
335 |
Q |
| |
|
|||||||||||||| ||| |||||||| ||||| |||||| | || || ||||||||||||| ||| |||||||||||||||| |
|
|
| T |
35132344 |
aagtttgaggaaatgaatgcagacctttttaatgagtgtatgaataccgtagagagttgtctcattgatgctaagatggacaagag |
35132259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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