View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16751_high_28 (Length: 405)
Name: NF16751_high_28
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16751_high_28 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 12 - 386
Target Start/End: Original strand, 33434006 - 33434391
Alignment:
| Q |
12 |
aaaggtcagtttaggtcgttggaagagtttcttttacactctgttaaattggccatctcccaagtctcat---catactacactattatagtacaaatga |
108 |
Q |
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| T |
33434006 |
aaaggtcagtttaggtcgttggaagagtctcttttacactctgttaaattggcca-ctcccaagtctcatcatcatactacactattatagtacaaatga |
33434104 |
T |
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| Q |
109 |
agaatttcaaaaagtgatcatagggtgcaccggccaaacaaaatctccctttatgttaatatatcatttcatcttgtttggttatctattttgtatttat |
208 |
Q |
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| T |
33434105 |
agaatttcaaaaagtgatcatagggtgcaccggccaagcaaaatctccctttatgttaatatatcatttcatcttgtttggttatctatttcgtatttat |
33434204 |
T |
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| Q |
209 |
ttcttaacttagttacaccttacgggtataaatacgtgtttgatttttggtagaaagcatcaataaaggttacgattataggaga---------aatgca |
299 |
Q |
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| T |
33434205 |
ttcttaacttagttacaccttacgggtataaatacgtttttgaattttggtagaaagtatcaataatggttacgattataggacaaatacaaataataca |
33434304 |
T |
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| Q |
300 |
attgtttggttgttcatgaataaaattgacttgcttnnnnnnnnttaataaaattggttttcccttcaaactcatctgagttggtct |
386 |
Q |
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| T |
33434305 |
aatgtttggttgttcatgaataaaattgatttgcttaaaaaaaattaataaaattggttttcccttcattctcacctgagttggtct |
33434391 |
T |
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