View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16751_high_45 (Length: 345)
Name: NF16751_high_45
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16751_high_45 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 22 - 334
Target Start/End: Complemental strand, 7322953 - 7322642
Alignment:
| Q |
22 |
caaggacaatggttagcattctcaataaaacaattgtaannnnnnnngcaaagtagtttcttttcgggccaccatgtttaaggatttaattccagagata |
121 |
Q |
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| T |
7322953 |
caagggcaatggttagcattctccataaaacaatcgtaaatttttttgcaaagtagtttcttt-cggcccaccatgtttaaggatttaatgccagagata |
7322855 |
T |
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| Q |
122 |
ccggggaatagcaaaaaggaacaaaatgccacttaatggaatcttagaaatcgaagcatttgactattgcgaaattgacttcattgatctgtttctaaat |
221 |
Q |
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| T |
7322854 |
cgggggaatagcaaaaaggaacaaaatgccacttaatggaatcttagaaatcgaagcatttgactattgagaaattgacttcattgatccgtttctaaat |
7322755 |
T |
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| Q |
222 |
tctccctctattcaaatatatcatgtgtgtagattatgtcccaaaatgggttgaaggtgttggatcaccttgtaatgatacacacacaatggtggacttt |
321 |
Q |
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|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7322754 |
tctcactctattcaaatatatcatgtgtgtagattatgtcacaaaatgggttgaaggtgttggatcaccttgtaatgatacacacacaatggtggacttt |
7322655 |
T |
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| Q |
322 |
tttaaaaagaata |
334 |
Q |
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| T |
7322654 |
ttgaaaaagaata |
7322642 |
T |
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